View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0583_low_132 (Length: 282)
Name: NF0583_low_132
Description: NF0583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0583_low_132 |
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Alignment Details
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 13367924 - 13368178
Alignment:
| Q |
1 |
acaataaagccccaaccacagctaaatatagggttgcaatttgtttcaataatcaaacatcaataaatattatagaaaatactgggaatgagaaaaacat |
100 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
13367924 |
acaataaagcctcaaccacagctaaatatagggttgcaatttgtttcaataatcaaacatcaataaatattatagaaaatactgggaatgagaaagacat |
13368023 |
T |
|
| Q |
101 |
tacaataaaatcaacacattcaaa--ttttacccatactatatnnnnnnngtatagtttccaaaagtacaactatccatggaatcctattagcagttcta |
198 |
Q |
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| T |
13368024 |
tacaataaaatcaacacattcaaattttttacccatactatataaaaaaagtatagcttccaaaagtacaactatccatggaatcctattagcagttcta |
13368123 |
T |
|
| Q |
199 |
aaatgatttgtaaagactatacaaggtcaaaagacttgccttttctgctgcttct |
253 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
13368124 |
aaatgatttgtaaagactatccaaggtcaaaagacttgccttttctgctgcttct |
13368178 |
T |
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