View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0583_low_139 (Length: 280)
Name: NF0583_low_139
Description: NF0583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0583_low_139 |
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Alignment Details
Target: chr2 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 25294049 - 25293942
Alignment:
| Q |
39 |
agcatagggtggagatggtgtcgccgagggtgcgatttgggaggtaatagttggggcagaggctgaagtccatgaagatgcggtcggtgatggtggggtt |
138 |
Q |
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| T |
25294049 |
agcatagggtggagatggtgtcgccgagggtgcgatttgggaggtaatagttggggcagaggctgaagtccatgaagatgcggtcggtgatggtggggtt |
25293950 |
T |
|
| Q |
139 |
tggtagct |
146 |
Q |
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| T |
25293949 |
tggtagct |
25293942 |
T |
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