View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0583_low_143 (Length: 277)
Name: NF0583_low_143
Description: NF0583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0583_low_143 |
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Alignment Details
Target: chr6 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 9 - 266
Target Start/End: Complemental strand, 21145192 - 21144935
Alignment:
| Q |
9 |
tcttgccttcatacaattatggaaaaagttggtgttagaatccccttttttaagccacttgatacgagatctttgcaccaccaatgaatcttttgcttta |
108 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21145192 |
tcttgccttcatacaattatggaaaaagttggtgttagaatccccttctttaagccacttgatacgagatctttgcaccaccaatgaatcttttgcttta |
21145093 |
T |
|
| Q |
109 |
agaagactccataaagcacaaattttttcttttcagactcggacatcttcatcactcaacaacgacaactctccccttaaatccacctcttgtacatctt |
208 |
Q |
| |
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|||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
21145092 |
agaagactccataaagcacaaaaattttcttttcggactcggacatcttcatcattcaacaacgacaactctccccttaaatccacctcttgtatatctt |
21144993 |
T |
|
| Q |
209 |
cttttaacctagaaattctctcttacatcgaaccatgctcctccttgttccactctct |
266 |
Q |
| |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
21144992 |
cttttaacctagaaattctctcttacatcgaaccatactcctccttgttccactctct |
21144935 |
T |
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