View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0583_low_187 (Length: 229)
Name: NF0583_low_187
Description: NF0583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0583_low_187 |
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Alignment Details
Target: chr6 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 161
Target Start/End: Complemental strand, 21145192 - 21145040
Alignment:
| Q |
9 |
tcttgccttcatacaattatggaaaaagttggtgttagaatccccttttttaagccacttgatacgagatctttgcaccaccaatgaatcttttgcttta |
108 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21145192 |
tcttgccttcatacaattatggaaaaagttggtgttagaatccccttctttaagccacttgatacgagatctttgcaccaccaatgaatcttttgcttta |
21145093 |
T |
|
| Q |
109 |
agaagactccataaagcacaaattttttcttttcagactcggacatcttcatc |
161 |
Q |
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|||||||||||||||||||||| |||||||||| |||||||||||||||||| |
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| T |
21145092 |
agaagactccataaagcacaaaaattttcttttcggactcggacatcttcatc |
21145040 |
T |
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