View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0583_low_58 (Length: 415)
Name: NF0583_low_58
Description: NF0583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0583_low_58 |
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Alignment Details
Target: chr7 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 103 - 402
Target Start/End: Original strand, 27608795 - 27609095
Alignment:
| Q |
103 |
aatattggaatcagggaaatatcttatctagagtnnnnnnn-ttaccttcaaataaatgtcaatggctctataaagaccatcatcaatgacacgagcata |
201 |
Q |
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| T |
27608795 |
aatattggaatcagggaaatatcttatctagagtaaaaaaaattaccttcaaataaatgtcaatggctctataaagaccatcatcaatgacacgagcata |
27608894 |
T |
|
| Q |
202 |
atcaggaagtatctcaatcaatgcgatgaatttctgtagacttaagcaaggatcaggagcaatctctgctaaaaaagcatcaataagctgacctactttt |
301 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
27608895 |
atcaggaagtatctcaatcaatgcgatgaatttctgtagacttaagcaaggatcaggagcaatttctgctaaaaaagcatcaataagctgacctactttt |
27608994 |
T |
|
| Q |
302 |
agcagagaaccatgcccattagaaccaatcccatcggattcatatccgtagtcttccgcttcttcctcttcaatccgctgcaagaaattctctagtagcc |
401 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27608995 |
agcagagaaccatgcccattagaaccaatcccatcggattcatatccgtagtcttccgcttcttcctcttcaatccgctgcaagaaattctctagtagcc |
27609094 |
T |
|
| Q |
402 |
t |
402 |
Q |
| |
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| T |
27609095 |
t |
27609095 |
T |
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