View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0583_low_6 (Length: 772)

Name: NF0583_low_6
Description: NF0583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0583_low_6
NF0583_low_6
[»] chr2 (29 HSPs)
chr2 (5-226)||(13892910-13893131)
chr2 (5-226)||(14033530-14033751)
chr2 (395-570)||(13896472-13896647)
chr2 (395-570)||(14037089-14037264)
chr2 (5-158)||(14033035-14033188)
chr2 (299-390)||(13893204-13893295)
chr2 (461-570)||(7474086-7474196)
chr2 (461-570)||(43341705-43341815)
chr2 (298-390)||(14033823-14033915)
chr2 (397-570)||(14380587-14380773)
chr2 (397-570)||(31686350-31686536)
chr2 (397-570)||(31787130-31787316)
chr2 (397-570)||(40254990-40255176)
chr2 (468-570)||(17481354-17481457)
chr2 (461-570)||(35457615-35457725)
chr2 (461-570)||(37640192-37640302)
chr2 (474-570)||(16765723-16765820)
chr2 (461-570)||(32496639-32496749)
chr2 (455-570)||(44282725-44282841)
chr2 (455-567)||(44003196-44003306)
chr2 (455-570)||(2442661-2442777)
chr2 (455-570)||(43695581-43695697)
chr2 (455-566)||(31047826-31047938)
chr2 (455-567)||(19860811-19860924)
chr2 (83-198)||(40254710-40254825)
chr2 (397-464)||(2443079-2443148)
chr2 (486-570)||(33597639-33597724)
chr2 (636-670)||(13896713-13896747)
chr2 (636-670)||(14037330-14037364)
[»] chr8 (33 HSPs)
chr8 (5-226)||(44238996-44239217)
chr8 (395-570)||(44240598-44240773)
chr8 (397-570)||(193866-194052)
chr8 (397-570)||(721470-721656)
chr8 (397-570)||(882577-882763)
chr8 (298-390)||(44239289-44239381)
chr8 (397-570)||(629194-629380)
chr8 (397-570)||(30211064-30211250)
chr8 (397-570)||(30982640-30982826)
chr8 (397-570)||(34773859-34774045)
chr8 (461-570)||(8417212-8417322)
chr8 (461-570)||(45275832-45275942)
chr8 (455-570)||(2026060-2026176)
chr8 (468-570)||(924590-924693)
chr8 (468-570)||(35801746-35801849)
chr8 (461-570)||(36821058-36821166)
chr8 (83-226)||(189999-190142)
chr8 (83-226)||(717603-717746)
chr8 (83-226)||(878710-878853)
chr8 (472-570)||(17073665-17073764)
chr8 (472-570)||(17574506-17574605)
chr8 (83-226)||(30983998-30984141)
chr8 (455-570)||(26575774-26575890)
chr8 (460-567)||(23018301-23018409)
chr8 (455-547)||(13016223-13016316)
chr8 (480-559)||(2598505-2598585)
chr8 (513-570)||(11071082-11071139)
chr8 (463-513)||(22936059-22936110)
chr8 (299-390)||(190214-190308)
chr8 (299-390)||(717818-717912)
chr8 (299-390)||(878925-879019)
chr8 (299-390)||(30983832-30983926)
chr8 (510-553)||(22934240-22934283)
[»] chr7 (28 HSPs)
chr7 (5-226)||(12909387-12909607)
chr7 (395-570)||(12910402-12910577)
chr7 (461-570)||(26826925-26827035)
chr7 (298-390)||(12909679-12909771)
chr7 (397-570)||(31012026-31012212)
chr7 (455-570)||(4035886-4036002)
chr7 (397-570)||(25341007-25341193)
chr7 (461-570)||(43664280-43664390)
chr7 (455-570)||(25191294-25191410)
chr7 (472-570)||(25472205-25472304)
chr7 (461-570)||(26827196-26827306)
chr7 (455-570)||(298101-298217)
chr7 (455-570)||(39857520-39857636)
chr7 (461-570)||(15000426-15000536)
chr7 (461-570)||(30139262-30139372)
chr7 (455-570)||(39957939-39958055)
chr7 (469-570)||(32451316-32451418)
chr7 (455-570)||(41065307-41065423)
chr7 (468-570)||(47085274-47085377)
chr7 (463-568)||(30825711-30825816)
chr7 (460-570)||(45203060-45203171)
chr7 (455-559)||(1999669-1999774)
chr7 (499-570)||(37371255-37371327)
chr7 (468-570)||(40233857-40233960)
chr7 (397-464)||(41064963-41065032)
chr7 (465-517)||(26169409-26169462)
chr7 (455-509)||(11341959-11342013)
chr7 (468-509)||(40725870-40725911)
[»] chr5 (37 HSPs)
chr5 (5-226)||(21022352-21022572)
chr5 (5-226)||(27739068-27739291)
chr5 (14-218)||(39236623-39236827)
chr5 (5-226)||(7072994-7073215)
chr5 (395-570)||(33232933-33233108)
chr5 (5-226)||(33229362-33229583)
chr5 (395-570)||(27737994-27738170)
chr5 (395-570)||(7071459-7071639)
chr5 (453-570)||(39236066-39236183)
chr5 (468-570)||(31905998-31906101)
chr5 (461-570)||(41741657-41741767)
chr5 (397-570)||(29541851-29542037)
chr5 (298-390)||(33229655-33229747)
chr5 (397-570)||(3260367-3260553)
chr5 (298-390)||(27738904-27738996)
chr5 (397-570)||(42663857-42664043)
chr5 (298-390)||(39236453-39236546)
chr5 (455-570)||(10900680-10900796)
chr5 (461-562)||(8957945-8958047)
chr5 (461-570)||(37046116-37046226)
chr5 (461-570)||(41039587-41039697)
chr5 (455-570)||(33386913-33387029)
chr5 (455-570)||(40979963-40980079)
chr5 (468-570)||(11017870-11017973)
chr5 (455-570)||(33082382-33082498)
chr5 (455-570)||(33115187-33115303)
chr5 (460-570)||(53076-53187)
chr5 (468-570)||(25256274-25256377)
chr5 (468-570)||(25320063-25320166)
chr5 (455-570)||(14083044-14083160)
chr5 (455-549)||(2526852-2526947)
chr5 (460-566)||(20069125-20069232)
chr5 (470-570)||(4295493-4295594)
chr5 (510-570)||(19357066-19357126)
chr5 (531-570)||(29367075-29367114)
chr5 (636-666)||(33233144-33233174)
chr5 (636-665)||(27737929-27737958)
[»] chr3 (37 HSPs)
chr3 (5-221)||(31813559-31813775)
chr3 (397-570)||(1527988-1528174)
chr3 (455-570)||(30811255-30811371)
chr3 (397-570)||(38469663-38469849)
chr3 (397-570)||(47140780-47140966)
chr3 (397-570)||(51124800-51124986)
chr3 (468-566)||(39252041-39252140)
chr3 (461-570)||(48253932-48254042)
chr3 (397-570)||(52693022-52693208)
chr3 (461-570)||(11264250-11264360)
chr3 (461-570)||(33025219-33025329)
chr3 (463-570)||(42275086-42275199)
chr3 (455-570)||(33329395-33329511)
chr3 (461-570)||(45151161-45151275)
chr3 (461-570)||(48181618-48181728)
chr3 (455-570)||(39267096-39267212)
chr3 (475-570)||(42074901-42074997)
chr3 (455-570)||(50392256-50392372)
chr3 (455-570)||(44610270-44610385)
chr3 (83-226)||(51128711-51128854)
chr3 (83-226)||(52692293-52692436)
chr3 (461-570)||(51230257-51230367)
chr3 (455-568)||(41536322-41536436)
chr3 (455-570)||(47697242-47697358)
chr3 (455-570)||(28884225-28884341)
chr3 (455-570)||(40237803-40237919)
chr3 (467-570)||(44329194-44329298)
chr3 (455-567)||(45488541-45488654)
chr3 (461-536)||(53686555-53686631)
chr3 (472-570)||(5104739-5104838)
chr3 (298-338)||(31813854-31813894)
chr3 (83-181)||(47141143-47141241)
chr3 (299-390)||(51128545-51128639)
chr3 (469-547)||(40244059-40244138)
chr3 (636-666)||(31813925-31813955)
chr3 (468-510)||(46798717-46798759)
chr3 (476-509)||(49526785-49526818)
[»] chr1 (40 HSPs)
chr1 (5-222)||(35604972-35605189)
chr1 (395-570)||(46407964-46408139)
chr1 (5-185)||(46406579-46406759)
chr1 (395-566)||(35606806-35606980)
chr1 (397-570)||(5271036-5271222)
chr1 (397-570)||(15353640-15353826)
chr1 (397-570)||(26821817-26822003)
chr1 (397-570)||(50978356-50978542)
chr1 (397-570)||(51487905-51488091)
chr1 (461-570)||(6706677-6706787)
chr1 (470-570)||(16342898-16342999)
chr1 (397-570)||(26999821-27000007)
chr1 (298-390)||(35605264-35605356)
chr1 (397-570)||(38843797-38843983)
chr1 (461-566)||(7385774-7385883)
chr1 (397-558)||(7592747-7592921)
chr1 (468-570)||(47655135-47655238)
chr1 (461-570)||(4484662-4484772)
chr1 (461-570)||(50031388-50031498)
chr1 (455-570)||(11829562-11829678)
chr1 (455-570)||(31099893-31100009)
chr1 (455-570)||(41512696-41512811)
chr1 (460-570)||(46033169-46033279)
chr1 (455-570)||(42137128-42137245)
chr1 (455-570)||(27576685-27576801)
chr1 (455-570)||(36495910-36496026)
chr1 (455-570)||(38627769-38627885)
chr1 (455-570)||(45179877-45179993)
chr1 (468-570)||(11050558-11050662)
chr1 (455-570)||(50521047-50521162)
chr1 (476-570)||(1763271-1763366)
chr1 (461-532)||(13509404-13509477)
chr1 (501-570)||(24076062-24076132)
chr1 (481-566)||(44740674-44740760)
chr1 (83-198)||(38843517-38843632)
chr1 (468-570)||(49431183-49431285)
chr1 (397-464)||(27576326-27576395)
chr1 (299-390)||(26821642-26821736)
chr1 (472-525)||(40709152-40709205)
chr1 (358-390)||(46406752-46406784)
[»] chr6 (11 HSPs)
chr6 (395-570)||(21515135-21515310)
chr6 (397-570)||(30019700-30019886)
chr6 (461-558)||(10683721-10683819)
chr6 (455-570)||(31745444-31745560)
chr6 (455-549)||(4147378-4147473)
chr6 (455-562)||(20837952-20838060)
chr6 (455-570)||(27825545-27825661)
chr6 (472-570)||(921614-921712)
chr6 (397-464)||(31745864-31745933)
chr6 (636-667)||(21515083-21515114)
chr6 (472-509)||(21254994-21255031)
[»] chr4 (31 HSPs)
chr4 (395-570)||(56560984-56561149)
chr4 (5-226)||(52057954-52058192)
chr4 (461-570)||(30417834-30417944)
chr4 (397-570)||(24035631-24035817)
chr4 (397-570)||(24247027-24247213)
chr4 (397-570)||(39382449-39382635)
chr4 (397-570)||(49128138-49128324)
chr4 (455-570)||(50523308-50523424)
chr4 (461-570)||(28963297-28963407)
chr4 (461-570)||(29385485-29385595)
chr4 (460-570)||(26459535-26459646)
chr4 (461-570)||(53663074-53663184)
chr4 (455-570)||(16202572-16202688)
chr4 (455-570)||(39733363-39733479)
chr4 (298-390)||(52057790-52057882)
chr4 (461-570)||(45106330-45106440)
chr4 (461-570)||(22605798-22605906)
chr4 (461-570)||(38768352-38768458)
chr4 (469-570)||(53403565-53403667)
chr4 (83-226)||(24037758-24037901)
chr4 (455-566)||(5937359-5937471)
chr4 (455-570)||(51833498-51833614)
chr4 (455-570)||(28912158-28912271)
chr4 (490-570)||(48407491-48407572)
chr4 (481-570)||(36212792-36212882)
chr4 (401-464)||(51833916-51833981)
chr4 (455-570)||(8510688-8510804)
chr4 (523-570)||(49724378-49724425)
chr4 (299-390)||(24037592-24037686)
chr4 (461-507)||(49724332-49724377)
chr4 (636-670)||(56561215-56561249)
[»] scaffold0068 (1 HSPs)
scaffold0068 (461-570)||(38262-38372)
[»] scaffold0097 (1 HSPs)
scaffold0097 (461-570)||(32499-32609)
[»] scaffold0184 (1 HSPs)
scaffold0184 (455-570)||(9212-9328)
[»] scaffold0006 (1 HSPs)
scaffold0006 (468-561)||(92103-92199)
[»] scaffold0808 (1 HSPs)
scaffold0808 (461-570)||(4646-4757)
[»] scaffold0069 (1 HSPs)
scaffold0069 (468-561)||(17377-17474)
[»] scaffold0003 (1 HSPs)
scaffold0003 (460-567)||(301706-301814)


Alignment Details
Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 13892910 - 13893131
Alignment:
Q  5 tctccaagaatatttgcttttttctacctggaaccttaaattcattcactccactgtccacttttttctagctagaactcaatcacccttcacaaattta 104  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||    
T  13892910 tctccaaccatatttgcttttttctacctggaaccttaaattcattcactccactgtccagttttctctagctagaactcaaccacccttcacaaattta 13893009  T
Q  105 atctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaaaaaggaaaaattctgctcaaag 204  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  13893010 atctaaaaatttattgctattaggttatataaaaacaccacctcctgctagcaaatattgtgctcaagagaacaacaaaaaggaaaaattctgctcaaaa 13893109  T
Q  205 gataacaacaacaacaaggtaa 226  Q
    ||||||||||||||||||||||    
T  13893110 gataacaacaacaacaaggtaa 13893131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 14033530 - 14033751
Alignment:
Q  5 tctccaagaatatttgcttttttctacctggaaccttaaattcattcactccactgtccacttttttctagctagaactcaatcacccttcacaaattta 104  Q
    |||||||  ||||||| |||| ||||| |||||||||||||||||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||    
T  14033530 tctccaaccatatttgattttatctacatggaaccttaaattcattcaatccactgtcaacttttctctagctagaactcaaccacccttcacaaattta 14033629  T
Q  105 atctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaaaaaggaaaaattctgctcaaag 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  14033630 atctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaaaaaggaaaaattctgctcaaaa 14033729  T
Q  205 gataacaacaacaacaaggtaa 226  Q
    ||||||||||||||||||||||    
T  14033730 gataacaacaacaacaaggtaa 14033751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 395 - 570
Target Start/End: Original strand, 13896472 - 13896647
Alignment:
Q  395 tattagtattgtaataacttatattttaactatattgcacttaattatcctaatttagtaatttctatttagttatgtccattttagtaattatacattc 494  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13896472 tattagtattgtaataacttatattttaactatattgcacttaattatcctaatttagtaatttctatttagctatgtccattttagtaattatacattc 13896571  T
Q  495 aaaagcaattttgataaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13896572 aaaagcaattttgataaaactatccaaacaacattcagtttgtttaatcaattctacattattgtatccaaacata 13896647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 395 - 570
Target Start/End: Original strand, 14037089 - 14037264
Alignment:
Q  395 tattagtattgtaataacttatattttaactatattgcacttaattatcctaatttagtaatttctatttagttatgtccattttagtaattatacattc 494  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14037089 tattagtattgtaataacttatattttaactatattgcacttaattatcctaatttagtaatttctatttagctatgtccattttagtaattatacattc 14037188  T
Q  495 aaaagcaattttgataaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14037189 aaaagcaattttgataaaactatccaaacaacattcagtttgtttaatcaattctacattattgtatccaaacata 14037264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 14033035 - 14033188
Alignment:
Q  5 tctccaagaatatttgcttttttctacctggaaccttaaattcattcactccactgtccacttttttctagctagaactcaatcacccttcacaaattta 104  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||    
T  14033035 tctccaaccatatttgcttttttctacctggaaccttaaattcattcactccactgtccagttttctctagctagaactcaaccacccttcacaaattta 14033134  T
Q  105 atctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaa 158  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14033135 atctaaaaatttattgctattaggttatataaaaacaccacctcctgctagcaa 14033188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 299 - 390
Target Start/End: Original strand, 13893204 - 13893295
Alignment:
Q  299 tgcaatgcttataaaatttgtttggttgcataatataacatctcttatgaatttctacaaacaaaaaatattgcattatatgtgtttgataa 390  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13893204 tgcaatgcttataaaatttgtttggttgcataatataacatctcttatgaatttctacaaacaaaaaatattgcattatatgtgtttgataa 13893295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 461 - 570
Target Start/End: Original strand, 7474086 - 7474196
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||    
T  7474086 atttagctatgtccattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacattcattttgtttaatcaattctgcattattgt 7474185  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  7474186 atccaaacata 7474196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 43341815 - 43341705
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||    
T  43341815 atttagctatgtccattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacatttagtttgtttaatcaattctgcattattgt 43341716  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  43341715 atccaaacata 43341705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 14033823 - 14033915
Alignment:
Q  298 ctgcaatgcttataaaatttgtttggttgcataatataacatctcttatgaatttctacaaacaaaaaatattgcattatatgtgtttgataa 390  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14033823 ctgcaatgcttataaaatttgtttggttgcatagtataacatctcttatgaatttctacaaacaaaaaatattgcattatatgtgtttgataa 14033915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 14380587 - 14380773
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  14380587 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 14380686  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  14380687 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 14380773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 31686536 - 31686350
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  31686536 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 31686437  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  31686436 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 31686350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 31787130 - 31787316
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  31787130 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 31787229  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  31787230 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 31787316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 40254990 - 40255176
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  40254990 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 40255089  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  40255090 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 40255176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 468 - 570
Target Start/End: Original strand, 17481354 - 17481457
Alignment:
Q  468 tatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaa 566  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17481354 tatgtccattttagtacttatacattcaaaagcaattttgataaaaactatccaaacaacattcagtttgtttaatcaattctgcattattgtatccaaa 17481453  T
Q  567 cata 570  Q
    ||||    
T  17481454 cata 17481457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 35457725 - 35457615
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||| |||||||||||||||||    
T  35457725 atttagctatgtccattttagtaattatacattcaaaagcaattttaataaaaactatccaaacaacattcagtttgtttaaacaattctgcattattgt 35457626  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  35457625 atccaaacata 35457615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 37640302 - 37640192
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||| |||| ||||||||||||||| |||||||||||    
T  37640302 atttagctatgtccattttagtaattatacattcaaaatcaattttgataaaaactatccaaacaacgttcattttgtttaatcaattatgcattattgt 37640203  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  37640202 atccaaacata 37640192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 474 - 570
Target Start/End: Complemental strand, 16765820 - 16765723
Alignment:
Q  474 cattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||| |||||||||||| |||||||    
T  16765820 cattttagtaattatacattcaaaagcaattttgatcaaaactatccaaataacattcagtttgtttaatcaattctacattattgtatctaaacata 16765723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 32496749 - 32496639
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| |||||| |||||||||||||||||||||||| |||||| ||||||| ||||  ||||||||||||||||| |||||||||| |||||||||||    
T  32496749 atttagctatgtctattttagtaattatacattcaaaaacaatttcgataaaaactattcaaacaacattcagtttgcttaatcaattatgcattattgt 32496650  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  32496649 atccaaacata 32496639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 44282725 - 44282841
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||  |||||| ||||| ||||||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||    
T  44282725 atttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcat 44282824  T
Q  554 tattgtatccaaacata 570  Q
    ||||| |||||||||||    
T  44282825 tattgcatccaaacata 44282841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 455 - 567
Target Start/End: Original strand, 44003196 - 44003306
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| ||||||| |||||||||||||||||||||||  ||||||||| |||| ||||||||||   || | |||||||||||||||||||||    
T  44003196 atttatatttagctatgtccgttttagtaattatacattcaaaattaattttgatcaaaaatatctaaaca---tttaatttgtttaatcaattctgcat 44003292  T
Q  554 tattgtatccaaac 567  Q
    ||||||||||||||    
T  44003293 tattgtatccaaac 44003306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 455 - 570
Target Start/End: Complemental strand, 2442777 - 2442661
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| ||||||||||||| |||||||||||||||||  ||||||||| ||||||||| |||||||||||  | |||||||||||||||   |    
T  2442777 atttttatttagctatgtccattttaataattatacattcaaaaataattttgatcaaaactatccaaacaacattctttctgtttaatcaattctatgt 2442678  T
Q  554 tattgtatccaaacata 570  Q
    ||| |||||||||||||    
T  2442677 tatcgtatccaaacata 2442661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 43695581 - 43695697
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| |||||||  |||| ||||||||||||||||||||||||| ||||||||||  |||||||| |||||||||| | | | ||||||||||||| |||    
T  43695581 atttgtatttagcaatgttcattttagtaattatacattcaaaaacaattttgatcgaaactatccaaacaacatttattctctttaatcaattctacat 43695680  T
Q  554 tattgtatccaaacata 570  Q
    |||| ||||||||||||    
T  43695681 tattatatccaaacata 43695697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 455 - 566
Target Start/End: Complemental strand, 31047938 - 31047826
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgataaa-actatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| |||||| |||||||||||||| |||||||| |||||||| || |||||||||| |  ||| |||||||||  | ||||||||||||||| |||||    
T  31047938 atttgtatttaattatgtccattttaataattataaattcaaaaacatttttgataaacatcatccaaacaacatctattttgtttaatcaattatgcat 31047839  T
Q  554 tattgtatccaaa 566  Q
    |||||||||||||    
T  31047838 tattgtatccaaa 31047826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 455 - 567
Target Start/End: Original strand, 19860811 - 19860924
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| |||||| ||||||||||||||||||| |||| |||||||||| |||| |||| | |  ||||| |||  |||||||||||| |||||    
T  19860811 atttgtatttagctatgtctattttagtaattatacatttaaaaacaattttgatcaaaaatatccacatgacatttagtgggtttaatcaattttgcat 19860910  T
Q  554 tattgtatccaaac 567  Q
    ||||||||||||||    
T  19860911 tattgtatccaaac 19860924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 40254710 - 40254825
Alignment:
Q  83 tcaatcacccttcacaaatttaatctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaa 182  Q
    |||| |||||||| ||||||||||| ||||||||||| | || || ||||||||||||| || ||||| | || ||| |||||| | |||||||||||||    
T  40254710 tcaaccacccttcccaaatttaatccaaaaatttattaccatcagcttatataacaacatcatctcctacaaggaaaaattgtggtgaagagaacaacaa 40254809  T
Q  183 aaaggaaaaattctgc 198  Q
     ||| |||||||||||    
T  40254810 gaagaaaaaattctgc 40254825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 397 - 464
Target Start/End: Complemental strand, 2443148 - 2443079
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctattt 464  Q
    ||||||||||||||||||||||||||  | ||||||||||||||||||| ||||||||||| ||||||||    
T  2443148 ttagtattgtaataacttatattttaggattatattgcacttaattatcttaatttagtaaattctattt 2443079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 486 - 570
Target Start/End: Complemental strand, 33597724 - 33597639
Alignment:
Q  486 tatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    |||||||||||||  ||||||||| ||||||||| ||||||| || ||||||||||||||||| |  |||||||||||||||||||    
T  33597724 tatacattcaaaaataattttgatcaaaactatccaaacaacctttagtttgtttaatcaattttatattattgtatccaaacata 33597639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 636 - 670
Target Start/End: Original strand, 13896713 - 13896747
Alignment:
Q  636 attctatctaaagctaaaccaaacacacactaagt 670  Q
    |||||||||||||||||||||||||||||| ||||    
T  13896713 attctatctaaagctaaaccaaacacacacaaagt 13896747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 636 - 670
Target Start/End: Original strand, 14037330 - 14037364
Alignment:
Q  636 attctatctaaagctaaaccaaacacacactaagt 670  Q
    |||||||||||||||||||||||||||||| ||||    
T  14037330 attctatctaaagctaaaccaaacacacacaaagt 14037364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 186; Significance: 1e-100; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 44238996 - 44239217
Alignment:
Q  5 tctccaagaatatttgcttttttctacctggaaccttaaattcattcactccactgtccacttttttctagctagaactcaatcacccttcacaaattta 104  Q
    |||||||  ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  44238996 tctccaaccatatttgtttttttctgcctggaaccttaaattcattcactccactgtccacttttctctagctagaactcaattacccttcacaaattta 44239095  T
Q  105 atctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaaaaaggaaaaattctgctcaaag 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  44239096 atctaaaaatttattgctattaggttatataacaacaccacctcctcctagcaaatattgtgctcaagagaacaacaaaaaggaaaaattctgcttaaaa 44239195  T
Q  205 gataacaacaacaacaaggtaa 226  Q
    ||||||||||||||||||||||    
T  44239196 gataacaacaacaacaaggtaa 44239217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 160; E-Value: 7e-85
Query Start/End: Original strand, 395 - 570
Target Start/End: Original strand, 44240598 - 44240773
Alignment:
Q  395 tattagtattgtaataacttatattttaactatattgcacttaattatcctaatttagtaatttctatttagttatgtccattttagtaattatacattc 494  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  44240598 tattagtattgtaataacttatattttaactatattgcacttaattatcctaatttagtaatttttatttagctatgtccattttagtaattatacattc 44240697  T
Q  495 aaaagcaattttgataaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44240698 aaaaacaattttgataaaactatccaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 44240773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 193866 - 194052
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  193866 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 193965  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  193966 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 194052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 721470 - 721656
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  721470 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 721569  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  721570 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 721656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 882577 - 882763
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  882577 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 882676  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  882677 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 882763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 44239289 - 44239381
Alignment:
Q  298 ctgcaatgcttataaaatttgtttggttgcataatataacatctcttatgaatttctacaaacaaaaaatattgcattatatgtgtttgataa 390  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  44239289 ctgcaatgcttataaaatttgtttggttgcataatataacatctcttataaatttctacaaacaaaaaatattgcattatatgtgtttgataa 44239381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 629194 - 629380
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  629194 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 629293  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| || ||||||||    
T  629294 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcattcaaacata 629380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 30211064 - 30211250
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  |||||||||||||||||| || ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  30211064 ttagtattgtaataccttatattttaggactatattgcacttaattgtcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 30211163  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  30211164 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 30211250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 30982826 - 30982640
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  30982826 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 30982727  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||| ||||||||||||||| |||||||||||    
T  30982726 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaattaattctgcattattgcatccaaacata 30982640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 34774045 - 34773859
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||| ||||||||||| ||          ||||| ||||| ||||    
T  34774045 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtcatttctatttatttgtatttaactatgtctattttggtaa 34773946  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  34773945 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 34773859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 461 - 570
Target Start/End: Original strand, 8417212 - 8417322
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| ||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  8417212 atttagctatgtccattttagtaattctacattcaaaagtaattttgattaaaactatctaaacaacattcaatttgtttaatcaattctgcattattat 8417311  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  8417312 atccaaacata 8417322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 45275942 - 45275832
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||| |||||| ||||    
T  45275942 atttagctatgtccattttagtaattatacattcaaaagcaattttgataaaaactatccaaataacattcagtttgtttaatcaattttgcattgttgt 45275843  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  45275842 atccaaacata 45275832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 2026060 - 2026176
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| |||||||  | ||||||||| ||||||||||||||||||||||||||||||||||    
T  2026060 atttgtatttagctatgtccattttagtaattatacattcaaaatcaattttttttaaaactatccaaacaacattcagtttgtttaatcaattctgcat 2026159  T
Q  554 tattgtatccaaacata 570  Q
    ||||||||| |||||||    
T  2026160 tattgtatcaaaacata 2026176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 468 - 570
Target Start/End: Original strand, 924590 - 924693
Alignment:
Q  468 tatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaa 566  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||    
T  924590 tatgtccattttagtaattatacattcaaaagtaattttgatcaaaactatctaaacaatattcagtttgtttaatcaattatgcattattgcatccaaa 924689  T
Q  567 cata 570  Q
    ||||    
T  924690 cata 924693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 468 - 570
Target Start/End: Complemental strand, 35801849 - 35801746
Alignment:
Q  468 tatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaa 566  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||| ||||    
T  35801849 tatgtccattttagtaattatacattcaaaaacaattttgataaaaactatccaaacaacattcattttgtttaatcaattctgcattattgtattcaaa 35801750  T
Q  567 cata 570  Q
    ||||    
T  35801749 cata 35801746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 36821166 - 36821058
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||  | |||||||||||||||||||    
T  36821166 atttagttatgtccattttagtaattatacattcaaaagcaatttcgatgaaaactatccaaacaacattcagtttg--tcatcaattctgcattattgt 36821069  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  36821068 atccaaacata 36821058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 83 - 226
Target Start/End: Original strand, 189999 - 190142
Alignment:
Q  83 tcaatcacccttcacaaatttaatctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaa 182  Q
    |||| |||||||| ||||||||||| ||||||||||| | || || ||||||||||||| || ||||| | || ||| |||||| | |||||||||||||    
T  189999 tcaaccacccttcccaaatttaatccaaaaatttattaccatcagcttatataacaacatcatctcctacaaggaaaaattgtggtgaagagaacaacaa 190098  T
Q  183 aaaggaaaaattctgctcaaaggataacaacaacaacaaggtaa 226  Q
     ||| |||||||||||||||| ||||||||||||||||||||||    
T  190099 gaagaaaaaattctgctcaaaagataacaacaacaacaaggtaa 190142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 83 - 226
Target Start/End: Original strand, 717603 - 717746
Alignment:
Q  83 tcaatcacccttcacaaatttaatctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaa 182  Q
    |||| |||||||| ||||||||||| ||||||||||| | || || ||||||||||||| || ||||| | || ||| |||||| | |||||||||||||    
T  717603 tcaaccacccttcccaaatttaatccaaaaatttattaccatcagcttatataacaacatcatctcctacaaggaaaaattgtggtgaagagaacaacaa 717702  T
Q  183 aaaggaaaaattctgctcaaaggataacaacaacaacaaggtaa 226  Q
     ||| |||||||||||||||| ||||||||||||||||||||||    
T  717703 gaagaaaaaattctgctcaaaagataacaacaacaacaaggtaa 717746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 83 - 226
Target Start/End: Original strand, 878710 - 878853
Alignment:
Q  83 tcaatcacccttcacaaatttaatctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaa 182  Q
    |||| |||||||| ||||||||||| ||||||||||| | || || ||||||||||||| || ||||| | || ||| |||||| | |||||||||||||    
T  878710 tcaaccacccttcccaaatttaatccaaaaatttattaccatcagcttatataacaacatcatctcctacaaggaaaaattgtggtgaagagaacaacaa 878809  T
Q  183 aaaggaaaaattctgctcaaaggataacaacaacaacaaggtaa 226  Q
     ||| |||||||||||||||| ||||||||||||||||||||||    
T  878810 gaagaaaaaattctgctcaaaagataacaacaacaacaaggtaa 878853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 472 - 570
Target Start/End: Complemental strand, 17073764 - 17073665
Alignment:
Q  472 tccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||| ||||||||||||||||| |||||||||||||| ||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  17073764 tccattttaataattatacattcaaaaacaattttgataaaaactatccaaacaacattatgtttgtttaatcaattctgcattattgtatccaaacata 17073665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 472 - 570
Target Start/End: Original strand, 17574506 - 17574605
Alignment:
Q  472 tccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||| ||||||||||||||||| |||||||||||||| ||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  17574506 tccattttaataattatacattcaaaaacaattttgataaaaactatccaaacaacattatgtttgtttaatcaattctgcattattgtatccaaacata 17574605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 83 - 226
Target Start/End: Complemental strand, 30984141 - 30983998
Alignment:
Q  83 tcaatcacccttcacaaatttaatctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaa 182  Q
    |||| |||||||| ||||||||||| ||||||||||| | || || ||||||||||||| || ||||| | || ||| |||||| | |||||||||||||    
T  30984141 tcaaccacccttcccaaatttaatccaaaaatttattaccatcagcttatataacaacatcatctcctacaaggaaaaattgtggtgaagagaacaacaa 30984042  T
Q  183 aaaggaaaaattctgctcaaaggataacaacaacaacaaggtaa 226  Q
     ||| |||||||||||||||| ||||||||||||||||||||||    
T  30984041 gaagaaaaaattctgctcaaaagataacaacaacaacaaggtaa 30983998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 26575774 - 26575890
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |  | | | |||||||||||  ||    
T  26575774 atttgtatttagctatgtccattttagtaattatacattcaaaagcaattttgatcaaaactatccaaacaacatcccttctatctaatcaattctatat 26575873  T
Q  554 tattgtatccaaacata 570  Q
    |||||||||||||||||    
T  26575874 tattgtatccaaacata 26575890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 460 - 567
Target Start/End: Complemental strand, 23018409 - 23018301
Alignment:
Q  460 tatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattg 558  Q
    ||||||||||||||  ||||||||||||||||||||||| |||||||||| ||||||||  |||||||| ||| | ||||||||||||| | ||||||||    
T  23018409 tatttagttatgtcggttttagtaattatacattcaaaaacaattttgatcaaaactattcaaacaacactcaatgtgtttaatcaattttacattattg 23018310  T
Q  559 tatccaaac 567  Q
    |||||||||    
T  23018309 tatccaaac 23018301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 455 - 547
Target Start/End: Original strand, 13016223 - 13016316
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaatt 547  Q
    |||| ||||||  |||||||||||||||||||||||||||||||| ||||||||| ||||||||  |||||||||||| | |||||||||||||    
T  13016223 atttgtatttaactatgtccattttagtaattatacattcaaaagtaattttgatcaaaactattaaaacaacattcattctgtttaatcaatt 13016316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 480 - 559
Target Start/End: Original strand, 2598505 - 2598585
Alignment:
Q  480 agtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    ||||||||||  |||||||| ||||||||| ||||||||| ||||||| |||| |||||||||||||||| ||||||||||    
T  2598505 agtaattatattttcaaaagtaattttgatcaaaactatcaaaacaacgttcattttgtttaatcaattcagcattattgt 2598585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 513 - 570
Target Start/End: Original strand, 11071082 - 11071139
Alignment:
Q  513 actatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    |||||| |||||||||||| ||| |||||||||||||| |||||||||||||||||||    
T  11071082 actatccaaacaacattcaatttatttaatcaattctgtattattgtatccaaacata 11071139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 463 - 513
Target Start/End: Complemental strand, 22936110 - 22936059
Alignment:
Q  463 ttagttatgtccattttagtaa-ttatacattcaaaagcaattttgataaaa 513  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  22936110 ttagctatgtccattttagtaaattatacattcaaaagcaattttgataaaa 22936059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 390
Target Start/End: Original strand, 190214 - 190308
Alignment:
Q  299 tgcaatgcttataaaatttgtttggttgcataatataacatctcttatgaatttctacaaacaaaaaatat---tgcattatatgtgtttgataa 390  Q
    ||||||||||||||||||||||||||| |||||  ||  | ||||||| ||||| ||||||  ||||||||   |||||| ||||||||||||||    
T  190214 tgcaatgcttataaaatttgtttggttccataaattagtacctcttattaatttatacaaaggaaaaatattgctgcattgtatgtgtttgataa 190308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 390
Target Start/End: Original strand, 717818 - 717912
Alignment:
Q  299 tgcaatgcttataaaatttgtttggttgcataatataacatctcttatgaatttctacaaacaaaaaatat---tgcattatatgtgtttgataa 390  Q
    ||||||||||||||||||||||||||| |||||  ||  | ||||||| ||||| ||||||  ||||||||   |||||| ||||||||||||||    
T  717818 tgcaatgcttataaaatttgtttggttccataaattagtacctcttattaatttatacaaaggaaaaatattgctgcattgtatgtgtttgataa 717912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 390
Target Start/End: Original strand, 878925 - 879019
Alignment:
Q  299 tgcaatgcttataaaatttgtttggttgcataatataacatctcttatgaatttctacaaacaaaaaatat---tgcattatatgtgtttgataa 390  Q
    ||||||||||||||||||||||||||| |||||  ||  | ||||||| ||||| ||||||  ||||||||   |||||| ||||||||||||||    
T  878925 tgcaatgcttataaaatttgtttggttccataaattagtacctcttattaatttatacaaaggaaaaatattgctgcattgtatgtgtttgataa 879019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 390
Target Start/End: Complemental strand, 30983926 - 30983832
Alignment:
Q  299 tgcaatgcttataaaatttgtttggttgcataatataacatctcttatgaatttctacaaacaaaaaatat---tgcattatatgtgtttgataa 390  Q
    ||||||||||||||||||||||||||| |||||  ||  | ||||||| ||||| ||||||  ||||||||   |||||| ||||||||||||||    
T  30983926 tgcaatgcttataaaatttgtttggttccataaattagtacctcttattaatttatacaaaggaaaaatattgctgcattgtatgtgtttgataa 30983832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 553
Target Start/End: Complemental strand, 22934283 - 22934240
Alignment:
Q  510 aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    ||||||||| |||||||||| || ||||||||||||||||||||    
T  22934283 aaaactatccaaacaacatttaggttgtttaatcaattctgcat 22934240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 186; Significance: 1e-100; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 12909387 - 12909607
Alignment:
Q  5 tctccaagaatatttgcttttttctacctggaaccttaaattcattcactccactgtccacttttttctagctagaactcaatcacccttcacaaattta 104  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  12909387 tctccaaccatatttgcttttttctacttggaaccttaaattcattcaatccactgtccacttttctctagctagaactcaaccacccttcacaaattta 12909486  T
Q  105 atctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaaaaaggaaaaattctgctcaaag 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  12909487 atctaaaaatttattgctattaggttatataacaacaccacctcc-gctagcaaatattgtgctcaagagaacaacaaaaaggaaaaattctgctcaaaa 12909585  T
Q  205 gataacaacaacaacaaggtaa 226  Q
    ||||||||||||||||||||||    
T  12909586 gataacaacaacaacaaggtaa 12909607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 395 - 570
Target Start/End: Original strand, 12910402 - 12910577
Alignment:
Q  395 tattagtattgtaataacttatattttaactatattgcacttaattatcctaatttagtaatttctatttagttatgtccattttagtaattatacattc 494  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12910402 tattagtattgtaataacttatattttaactatattgcacttaattatcctaatttagtaatttctatttagctatgtccattttagtaattatacattc 12910501  T
Q  495 aaaagcaattttgataaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12910502 aaaagcaattttgataaaactatccaaacaacattcagtttgtttaatcaattctgcattattatatccaaacata 12910577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 461 - 570
Target Start/End: Original strand, 26826925 - 26827035
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  26826925 atttagctatgtccattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacattcagtttgtttaatcaattctgcattattgt 26827024  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  26827025 atccaaacata 26827035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 12909679 - 12909771
Alignment:
Q  298 ctgcaatgcttataaaatttgtttggttgcataatataacatctcttatgaatttctacaaacaaaaaatattgcattatatgtgtttgataa 390  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12909679 ctgcaatgcttataaaatttgtttggttgcataatataacatctcttatgaatttctacaaacaaaaaatattgcattatatgtgtttgataa 12909771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 31012212 - 31012026
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  31012212 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 31012113  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  31012112 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 31012026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 4035886 - 4036002
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||| |||    
T  4035886 atttatatttagctatgtctattttagtaattatacattcaaaagcaattttgattaaaactatccaaacaacatttagtttgtttaatcaattctacat 4035985  T
Q  554 tattgtatccaaacata 570  Q
    |||||||||||||||||    
T  4035986 tattgtatccaaacata 4036002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 25341193 - 25341007
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||| ||| ||          ||||| ||||| ||||    
T  25341193 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctagttatttgtatttaactatgtctattttggtaa 25341094  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  25341093 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 25341007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 43664390 - 43664280
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| || ||||||||||||||| |||||||||||||||||    
T  43664390 atttagctatgtccattttagtaattatacattcaaaagcaattttgataaaaactatccaaataatattcagtttgtttaaacaattctgcattattgt 43664291  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  43664290 atccaaacata 43664280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 455 - 570
Target Start/End: Complemental strand, 25191410 - 25191294
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| ||||| |||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||| |||    
T  25191410 atttgtatttagctatgtgcattttagtaattatacatttaaaagcaattttgatcaaaactatccaaacaacattcattttgtttaatcaattctacat 25191311  T
Q  554 tattgtatccaaacata 570  Q
    |||||||||||||||||    
T  25191310 tattgtatccaaacata 25191294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 472 - 570
Target Start/End: Complemental strand, 25472304 - 25472205
Alignment:
Q  472 tccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25472304 tccattttagtaattatatattcaaaagcaattttgataaaaactatccaaacaacattcagtttgtttaatcaattatgcattattgtatccaaacata 25472205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 26827306 - 26827196
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||| |||||||||||||||||||| ||||||    
T  26827306 atttagctatgtccattttagtaattgtacattcaaaagcaattttgataaaaactatccaaacaactttcaatttgtttaatcaattctgcaatattgt 26827207  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  26827206 atccaaacata 26827196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 455 - 570
Target Start/End: Complemental strand, 298217 - 298101
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || | ||||||||||||||  |||    
T  298217 atttgtatttagctatgtccattttagtaattatacattcaaaagcaattttgatcaaaactatctaaacaacatccattctgtttaatcaattccacat 298118  T
Q  554 tattgtatccaaacata 570  Q
    | |||||||||||||||    
T  298117 ttttgtatccaaacata 298101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 39857520 - 39857636
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| ||||||||||| ||||| | |    
T  39857520 atttttatttagctatgtccattttagtaattatacattcaaaagcaattttgatcaaaactatccaaacgacattcattttgtttaatcgattctacgt 39857619  T
Q  554 tattgtatccaaacata 570  Q
    |||||||||||||||||    
T  39857620 tattgtatccaaacata 39857636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 461 - 570
Target Start/End: Original strand, 15000426 - 15000536
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| |||||| | ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| |    
T  15000426 atttagctatgtctagtttagtaattatacattcaaaagcaattttgttaaaaactatccaaacaacattcagtttgtttaatcaattctgcattatttt 15000525  T
Q  560 atccaaacata 570  Q
    || ||||||||    
T  15000526 attcaaacata 15000536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 30139372 - 30139262
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||  ||| ||||||||||||||||||||||| || ||||||||    
T  30139372 atttagctatgtccattttagtaattatacattcaaaatcaattttgataaaaactatccgaacgacattcagtttgtttaatcaattatgaattattgt 30139273  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  30139272 atccaaacata 30139262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 455 - 570
Target Start/End: Complemental strand, 39958055 - 39957939
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| |||||  |||||||||||||||||||||||| |||||||||| ||||||||| |||| ||||| ||||||||||||||||||| |||    
T  39958055 atttttatttagctatgttaattttagtaattatacattcaaaaacaattttgatcaaaactatccaaacgacatttagtttgtttaatcaattctacat 39957956  T
Q  554 tattgtatccaaacata 570  Q
    |||||||||||||||||    
T  39957955 tattgtatccaaacata 39957939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 469 - 570
Target Start/End: Original strand, 32451316 - 32451418
Alignment:
Q  469 atgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaac 567  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| | ||||||||||||| | |||||||||||| ||||    
T  32451316 atgtccattttagtaattatacattcaaaagcaattttgatcaaaactatttaaacaacattcattatgtttaatcaattttacattattgtatcgaaac 32451415  T
Q  568 ata 570  Q
    |||    
T  32451416 ata 32451418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 41065307 - 41065423
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| | | ||||||||||||| | |    
T  41065307 atttttatttagctatgtccattttagtaattatacattcaaaagcaattttgatcaaaactatccaaacaacattcattctctttaatcaattctacgt 41065406  T
Q  554 tattgtatccaaacata 570  Q
    ||| |||| ||||||||    
T  41065407 tatcgtattcaaacata 41065423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 468 - 570
Target Start/End: Complemental strand, 47085377 - 47085274
Alignment:
Q  468 tatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaa 566  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| | || | | ||||||||||| ||||||||||||||||||    
T  47085377 tatgtccattttagtaattatacattcaaaagcaattttgatcaaaactatccaaacaacctccactctatttaatcaattttgcattattgtatccaaa 47085278  T
Q  567 cata 570  Q
    ||||    
T  47085277 cata 47085274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 463 - 568
Target Start/End: Original strand, 30825711 - 30825816
Alignment:
Q  463 ttagttatgtccattttagtaattatacattcaaaagcaattttgataaaact-atctaaacaacattcagtttgtttaatcaattctgcattattgtat 561  Q
    |||| |||||| ||||||||| ||||||||||||||||||||||||||||| | ||| ||| ||||||||| ||||||||||||||||||||||||||||    
T  30825711 ttagctatgtctattttagta-ttatacattcaaaagcaattttgataaaaattatccaaataacattcagattgtttaatcaattctgcattattgtat 30825809  T
Q  562 ccaaaca 568  Q
    |||||||    
T  30825810 ccaaaca 30825816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 460 - 570
Target Start/End: Original strand, 45203060 - 45203171
Alignment:
Q  460 tatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattg 558  Q
    |||| |||||||| ||||| ||||||||||  | ||||| |||||||||| ||||||||| |||||||||||| || |||||||||||||||||||||||    
T  45203060 tattaagttatgttcatttaagtaattatatttccaaaaccaattttgatcaaaactatccaaacaacattcaattggtttaatcaattctgcattattg 45203159  T
Q  559 tatccaaacata 570  Q
    |||| |||||||    
T  45203160 tatctaaacata 45203171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 455 - 559
Target Start/End: Complemental strand, 1999774 - 1999669
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||  |||||||||| | | | ||||||||||||| |||    
T  1999774 atttgtatttagctatgtccattttagtaattatacattcaaaagcaagtttgatcaaaactattcaaacaacatttattctatttaatcaattctacat 1999675  T
Q  554 tattgt 559  Q
    ||||||    
T  1999674 tattgt 1999669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 499 - 570
Target Start/End: Original strand, 37371255 - 37371327
Alignment:
Q  499 gcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37371255 gcaattttgataaaaactatccaaacaacattcactttgtttaatcaattctgcattattgtatccaaacata 37371327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 468 - 570
Target Start/End: Original strand, 40233857 - 40233960
Alignment:
Q  468 tatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaa 566  Q
    ||||||||||| |||||| ||||||||||||  ||||||||| ||||||||| |||||||||||| |  |||||||||||| | | |||||||||| |||    
T  40233857 tatgtccatttaagtaatcatacattcaaaaataattttgatcaaaactatccaaacaacattcattccgtttaatcaattatacgttattgtatctaaa 40233956  T
Q  567 cata 570  Q
    ||||    
T  40233957 cata 40233960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 41064963 - 41065032
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctattt 464  Q
    |||||||| |||||||||||||||||  ||||||||| ||||||||||| ||||||||||||||||||||    
T  41064963 ttagtattctaataacttatattttaggactatattgtacttaattatcttaatttagtaatttctattt 41065032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 465 - 517
Target Start/End: Complemental strand, 26169462 - 26169409
Alignment:
Q  465 agttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactat 517  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26169462 agttatgtccattttagtaattatacattcaaaagcaattttgatcaaaactat 26169409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 455 - 509
Target Start/End: Original strand, 11341959 - 11342013
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat 509  Q
    |||| ||||||  |||||| |||||||||||||||||||||||| ||||||||||    
T  11341959 atttgtatttaactatgtctattttagtaattatacattcaaaaacaattttgat 11342013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 468 - 509
Target Start/End: Original strand, 40725870 - 40725911
Alignment:
Q  468 tatgtccattttagtaattatacattcaaaagcaattttgat 509  Q
    ||||| ||||||| ||||||||||||||||| ||||||||||    
T  40725870 tatgtacattttaataattatacattcaaaaacaattttgat 40725911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 186; Significance: 1e-100; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 21022572 - 21022352
Alignment:
Q  5 tctccaagaatatttgcttttttctacctggaaccttaaattcattcactccactgtccacttttttctagctagaactcaatcacccttcacaaattta 104  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||    
T  21022572 tctccaaccatatttgctttttt-tacctggaaccttaaattcattcactccactttccacttttctctagctagaactcaaccacccttcacaaattta 21022474  T
Q  105 atctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaaaaaggaaaaattctgctcaaag 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  21022473 atctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaaaaaggaaaaattctgctcaaaa 21022374  T
Q  205 gataacaacaacaacaaggtaa 226  Q
    ||||||||||| ||||||||||    
T  21022373 gataacaacaagaacaaggtaa 21022352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 27739291 - 27739068
Alignment:
Q  5 tctccaagaatatttgcttttttctacctggaaccttaaattcattcactccac--tgtccacttttttctagctagaactcaatcacccttcacaaatt 102  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||| |||||||||||||||    
T  27739291 tctccaaccatatttgcttttttctacctggaaccttaaattcattcactccacactgtccacttttctctagttagaactcaaccacccttcacaaatt 27739192  T
Q  103 taatctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaaaaaggaaaaattctgctcaa 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27739191 taatctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaaaaaggataaattctgctcaa 27739092  T
Q  203 aggataacaacaacaacaaggtaa 226  Q
    | ||||||||||||||||||||||    
T  27739091 aagataacaacaacaacaaggtaa 27739068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 14 - 218
Target Start/End: Complemental strand, 39236827 - 39236623
Alignment:
Q  14 atatttgcttttttctacctggaaccttaaattcattcactccactgtccacttttttctagctagaactcaatcacccttcacaaatttaatctaaaaa 113  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||    
T  39236827 atatttgcttttttctacctgaaaccttaaattcattcactccactgtccacttttctctagctataactcaatcacccttcacaaatttactctaaaaa 39236728  T
Q  114 tttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaaaaaggaaaaattctgctcaaaggataacaac 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  39236727 tttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaaaaaggaaaaattatgctcaaaagataacaac 39236628  T
Q  214 aacaa 218  Q
    |||||    
T  39236627 aacaa 39236623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 7073215 - 7072994
Alignment:
Q  5 tctccaagaatatttgcttttttctacctggaaccttaaattcattcactccactgtccacttttttctagctagaactcaatcacccttcacaaattta 104  Q
    |||||||  ||||||||||||||||||| | ||| |||||||||||||||  | ||||||||||| |||||||||||||||| |||||||||||||||||    
T  7073215 tctccaaccatatttgcttttttctacccgtaacgttaaattcattcactttagtgtccacttttctctagctagaactcaaccacccttcacaaattta 7073116  T
Q  105 atctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaaaaaggaaaaattctgctcaaag 204  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  7073115 atctgaaaatttattgctattaggttatataacaacaacacctcctgctagcaaatattgtgctcaagagaacaacaataaggaaaaattctgctcaaaa 7073016  T
Q  205 gataacaacaacaacaaggtaa 226  Q
    ||||||||||||||||||||||    
T  7073015 gataacaacaacaacaaggtaa 7072994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 395 - 570
Target Start/End: Original strand, 33232933 - 33233108
Alignment:
Q  395 tattagtattgtaataacttatattttaactatattgcacttaattatcctaatttagtaatttctatttagttatgtccattttagtaattatacattc 494  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33232933 tattagtattgtaataacttatattttaactatattgcacttaattatcctaatttagtaatttctatttagctatgtccattttagtaattatacattc 33233032  T
Q  495 aaaagcaattttgataaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33233033 aaaagcaattttgataaaactatccaaacaacattcagtttgtttaatcgattctgcattattgtatccaaacata 33233108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 33229362 - 33229583
Alignment:
Q  5 tctccaagaatatttgcttttttctacctggaaccttaaattcattcactccactgtccacttttttctagctagaactcaatcacccttcacaaattta 104  Q
    |||||||  ||||||| |||| ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||| |||||||||||||||||    
T  33229362 tctccaaccatatttgtttttctctacctggaaccttaaattcattcgctccactgtctacttttctctagctagaactcaaccacccttcacaaattta 33229461  T
Q  105 atctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaaaaaggaaaaattctgctcaaag 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||     
T  33229462 atctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaata-tctactcaagagaacaacaaaaaggaaaaattctgctcaaaa 33229560  T
Q  205 gataacaa-caacaacaaggtaa 226  Q
    |||||||| ||||||||||||||    
T  33229561 gataacaatcaacaacaaggtaa 33229583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 395 - 570
Target Start/End: Complemental strand, 27738170 - 27737994
Alignment:
Q  395 tattagtattgtaataacttatattttaactatattgcacttaattatcctaatttagtaatttctatttagttatgtccattttagtaattatacattc 494  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27738170 tattagtattgtaataacttatattttaactatattgcacttaattatcctaatttagtaatttctatttagctatgtccattttagtaattatacattc 27738071  T
Q  495 aaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27738070 aaaagcaattttgataaaaactatccaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 27737994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 395 - 570
Target Start/End: Complemental strand, 7071639 - 7071459
Alignment:
Q  395 tattagtattgtaataacttatattttaa--ctatattgcacttaattatcctaatttagtaatttctatttagttatgtccattttagtaattatacat 492  Q
    ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  7071639 tattagtattgtaataacttaaattttaagactatattgcacttaattatcctaatttagtaatttctatttacctatgtccattttggtaattatacat 7071540  T
Q  493 tcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattct--gcattattgtatccaaacata 570  Q
    |||||| |||||||||| ||||||||| |||||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  7071539 tcaaaaacaattttgatcaaaactatccaaacaacattcagtttgtttaatcaattatgcgcattattgtatccaaacata 7071459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 453 - 570
Target Start/End: Complemental strand, 39236183 - 39236066
Alignment:
Q  453 taatttctatttagttatgtccattttagtaattatacattcaaaagcaattttgataaaactatctaaacaacattcagtttgtttaatcaattctgca 552  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||    
T  39236183 taatttctatttagctatgtccattttagtaattatacattcaaaagcaattttaataaaattatccaaacaacattcagtttgtttaatcaattctgca 39236084  T
Q  553 ttattgtatccaaacata 570  Q
    ||||| ||| ||||||||    
T  39236083 ttattatattcaaacata 39236066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 468 - 570
Target Start/End: Original strand, 31905998 - 31906101
Alignment:
Q  468 tatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaa 566  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31905998 tatgtccattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacattcagtttgtttaatcaattctgcattattgtatccaaa 31906097  T
Q  567 cata 570  Q
    ||||    
T  31906098 cata 31906101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 41741767 - 41741657
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  41741767 atttagctatgtccattttagtaattatacattcaaaagcaattttaataaaaactatccaaacaacattcagtttgtttaatcaattctgcattattgt 41741668  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  41741667 atccaaacata 41741657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 29542037 - 29541851
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  29542037 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 29541938  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  29541937 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 29541851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 33229655 - 33229747
Alignment:
Q  298 ctgcaatgcttataaaatttgtttggttgcataatataacatctcttatgaatttctacaaacaaaaaatattgcattatatgtgtttgataa 390  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33229655 ctgcaatgcttataaaatttgtttggttgcatagtataacatctcttatgaatttctacaaacaaaaaatattgcattatatgtgtttgataa 33229747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 3260553 - 3260367
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  3260553 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 3260454  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||| ||||||| |||||||||||    
T  3260453 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgtattattgcatccaaacata 3260367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 298 - 390
Target Start/End: Complemental strand, 27738996 - 27738904
Alignment:
Q  298 ctgcaatgcttataaaatttgtttggttgcataatataacatctcttatgaatttctacaaacaaaaaatattgcattatatgtgtttgataa 390  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  27738996 ctgcaatgcttataaaatttgtttggttgcataatataacatctcttattcatttctacaaacaaaaaatattgcattatatgtgtttgataa 27738904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 42663857 - 42664043
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  42663857 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 42663956  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||  ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  42663957 ttatacattcaaaaataattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 42664043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 298 - 390
Target Start/End: Complemental strand, 39236546 - 39236453
Alignment:
Q  298 ctgcaatgcttataaaatttgtttggttgcataatataacatctcttatgaatttctacaaa-caaaaaatattgcattatatgtgtttgataa 390  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  39236546 ctgcaatgcttataaaatttgtttggttgcataatataacatctcttatgaatttctacaaataaaaaaatattgcattatatgtgtttgataa 39236453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 10900680 - 10900796
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| |||||||||||||||||||||||||||||||  ||||||||| |||| |||| |||||||||||||||||||||||||||| |||||    
T  10900680 atttgtatttagctatgtccattttagtaattatacattcaaaattaattttgatcaaaattatccaaacaacattcagtttgtttaatcaattatgcat 10900779  T
Q  554 tattgtatccaaacata 570  Q
    |||||||||||||||||    
T  10900780 tattgtatccaaacata 10900796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 461 - 562
Target Start/End: Complemental strand, 8958047 - 8957945
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| ||| || ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  8958047 atttagctatatctattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacattcagtttgtttaatcaattctgcattattgt 8957948  T
Q  560 atc 562  Q
    |||    
T  8957947 atc 8957945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 461 - 570
Target Start/End: Original strand, 37046116 - 37046226
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaact-atctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||| ||| | ||| ||||||||||||||||||||||||||||||||||||||||    
T  37046116 atttagctatgtctattttagtaattatacattcaaaagcaattttgatcaaaatcatccaaacaacattcagtttgtttaatcaattctgcattattgt 37046215  T
Q  560 atccaaacata 570  Q
    || ||||||||    
T  37046216 attcaaacata 37046226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 41039697 - 41039587
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||| |||| ||||| |||||||||||| || ||||||||||||||||||||||||    
T  41039697 atttagttatgttcattttagtaattacacattcaaaagcaattttgaaaaaaactatccaaacaacattcatttcgtttaatcaattctgcattattgt 41039598  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  41039597 atccaaacata 41039587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 455 - 570
Target Start/End: Complemental strand, 33387029 - 33386913
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||| | | ||||||||||||| |||    
T  33387029 atttgtatttagctatgtccattttagtaattatacattcaaaaacaattttgatcaaaactatccaaacaacattcattctatttaatcaattctacat 33386930  T
Q  554 tattgtatccaaacata 570  Q
    |||||||||||||||||    
T  33386929 tattgtatccaaacata 33386913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 40979963 - 40980079
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||| | ||||||||||||||| |||||    
T  40979963 atttgtatttagctatgtccattttagtaattatacattcaaaatcaattttgatcaaaactatccaaacaacatttaatttgtttaatcaattttgcat 40980062  T
Q  554 tattgtatccaaacata 570  Q
    ||||||||||| |||||    
T  40980063 tattgtatccatacata 40980079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 468 - 570
Target Start/End: Complemental strand, 11017973 - 11017870
Alignment:
Q  468 tatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaa 566  Q
    |||||||||||||||||  |||||||||||| |||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||    
T  11017973 tatgtccattttagtaaccatacattcaaaaacaattttgatgaaaactatccaaacaacattcagtttgtctaatcaattctgcattattatatccaaa 11017874  T
Q  567 cata 570  Q
    ||||    
T  11017873 cata 11017870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 455 - 570
Target Start/End: Complemental strand, 33082498 - 33082382
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| || | | ||||||||||||| |||    
T  33082498 atttgtatttaactatgtccattttagtaattatacattcaaaagcaattttgatcaaaactatccaaacaacatccattctatttaatcaattctacat 33082399  T
Q  554 tattgtatccaaacata 570  Q
    |||||||| ||||||||    
T  33082398 tattgtattcaaacata 33082382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 33115187 - 33115303
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||  |||||| ||||| ||||||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||    
T  33115187 atttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcat 33115286  T
Q  554 tattgtatccaaacata 570  Q
    |||||||||||||||||    
T  33115287 tattgtatccaaacata 33115303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 460 - 570
Target Start/End: Complemental strand, 53187 - 53076
Alignment:
Q  460 tatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattg 558  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||| |||||||||||| |||||||| |||| | ||||| || |    
T  53187 tatttagttatgtccattttagtaattatactttcaaaagcaattttgatcaaaaccatccaaacaacattcaatttgtttattcaactgtgcatcatcg 53088  T
Q  559 tatccaaacata 570  Q
    ||||||||||||    
T  53087 tatccaaacata 53076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 468 - 570
Target Start/End: Complemental strand, 25256377 - 25256274
Alignment:
Q  468 tatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaa 566  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||  | |  |||||||||||||| ||||||||||||||||    
T  25256377 tatgtccattttagtaattatacattcaaaaacaattttgatcaaaactatctaaacaacatcaattccgtttaatcaattctacattattgtatccaaa 25256278  T
Q  567 cata 570  Q
    ||||    
T  25256277 cata 25256274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 468 - 570
Target Start/End: Complemental strand, 25320166 - 25320063
Alignment:
Q  468 tatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaa 566  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||  | |  |||||||||||||| ||||||||||||||||    
T  25320166 tatgtccattttagtaattatacattcaaaaacaattttgatcaaaactatctaaacaacatcaattccgtttaatcaattctacattattgtatccaaa 25320067  T
Q  567 cata 570  Q
    ||||    
T  25320066 cata 25320063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 14083044 - 14083160
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||  |||||| ||||| ||||||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||    
T  14083044 atttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcat 14083143  T
Q  554 tattgtatccaaacata 570  Q
    ||||| |||||||||||    
T  14083144 tattgcatccaaacata 14083160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 455 - 549
Target Start/End: Original strand, 2526852 - 2526947
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattct 549  Q
    |||| |||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||| | |||||||||||||||    
T  2526852 atttttatttagttatgtctattttagtaattatacattcaagagcaattttgatcaaaactatccaaacaacattcattctgtttaatcaattct 2526947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 460 - 566
Target Start/End: Complemental strand, 20069232 - 20069125
Alignment:
Q  460 tatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattg 558  Q
    |||||| |||||||  |||||||| |||||||||||||| |||||||||| ||||||||| ||||||||||||   ||||||||||||| ||||||||||    
T  20069232 tatttaattatgtcggttttagtacttatacattcaaaaacaattttgatcaaaactatccaaacaacattcaacgtgtttaatcaattttgcattattg 20069133  T
Q  559 tatccaaa 566  Q
    ||||||||    
T  20069132 tatccaaa 20069125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 470 - 570
Target Start/End: Original strand, 4295493 - 4295594
Alignment:
Q  470 tgtccattttagtaattatacattcaaaagcaattttgataaaac-tatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaaca 568  Q
    |||||||||||||||||||||||||||||  ||||||||| |||| |||| |||||||||||| ||||||||||||||| |  |||||||||| ||||||    
T  4295493 tgtccattttagtaattatacattcaaaaataattttgatcaaacatatccaaacaacattcaatttgtttaatcaattttaaattattgtattcaaaca 4295592  T
Q  569 ta 570  Q
    ||    
T  4295593 ta 4295594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 510 - 570
Target Start/End: Original strand, 19357066 - 19357126
Alignment:
Q  510 aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19357066 aaaactatacaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 19357126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 531 - 570
Target Start/End: Complemental strand, 29367114 - 29367075
Alignment:
Q  531 agtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||| ||||||||||||||||||||    
T  29367114 agtttgtttaatcaaatctacattattgtatccaaacata 29367075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 636 - 666
Target Start/End: Original strand, 33233144 - 33233174
Alignment:
Q  636 attctatctaaagctaaaccaaacacacact 666  Q
    |||||||||||||||||||||||||||||||    
T  33233144 attctatctaaagctaaaccaaacacacact 33233174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 665
Target Start/End: Complemental strand, 27737958 - 27737929
Alignment:
Q  636 attctatctaaagctaaaccaaacacacac 665  Q
    ||||||||||||||||||||||||||||||    
T  27737958 attctatctaaagctaaaccaaacacacac 27737929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 181; Significance: 2e-97; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 31813559 - 31813775
Alignment:
Q  5 tctccaagaatatttgcttttttctacctggaaccttaaattcattcactccactgtccacttttttctagctagaactcaatcacccttcacaaattta 104  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  31813559 tctccaaccatatttgcttttttctacctgaaaccttaaattcattcactccactgtccacttttctctagctagaactcaaccacccttcacaaattta 31813658  T
Q  105 atctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaaaaaggaaaaattctgctcaaag 204  Q
    |||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  31813659 atctaaaaatttgttgcaattaggttatataacaacaccacctcctactagcaaatattgtgctcaagagaacaacaaaaaggaaaaattctgctcaaaa 31813758  T
Q  205 gataacaacaacaacaa 221  Q
    |||||||||||||||||    
T  31813759 gataacaacaacaacaa 31813775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 1527988 - 1528174
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  1527988 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 1528087  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  1528088 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 1528174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 30811255 - 30811371
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||    
T  30811255 atttgtatttagctatgtccattttagtaattatacattcaaaatcaattttgatcaaaactatccaaacaacattcagtttgtttaatcaattctgaat 30811354  T
Q  554 tattgtatccaaacata 570  Q
    |||||||||||||||||    
T  30811355 tattgtatccaaacata 30811371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 38469663 - 38469849
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  38469663 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttttatttaactatgtctattttggtaa 38469762  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  38469763 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 38469849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 47140966 - 47140780
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  47140966 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 47140867  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  47140866 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 47140780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 51124986 - 51124800
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  51124986 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 51124887  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  51124886 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 51124800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 468 - 566
Target Start/End: Original strand, 39252041 - 39252140
Alignment:
Q  468 tatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaa 566  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39252041 tatgtccattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacattcagtttgtttaatcaattctgcattattgtatccaaa 39252140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 48254042 - 48253932
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||    
T  48254042 atttagctatgtccattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacattcagtttgtttaatcaattttgcattattgt 48253943  T
Q  560 atccaaacata 570  Q
    ||| |||||||    
T  48253942 atctaaacata 48253932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 52693022 - 52693208
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  52693022 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 52693121  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||| ||||||| |||||||||||    
T  52693122 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgtattattgcatccaaacata 52693208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 461 - 570
Target Start/End: Original strand, 11264250 - 11264360
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||| ||||    
T  11264250 atttagctatgttcattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacattcattttgtttaatcaattctgcatttttgt 11264349  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  11264350 atccaaacata 11264360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 33025329 - 33025219
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| |||||| ||||||||||||||| |||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  33025329 atttagctatgtctattttagtaattatagattcaaaaacaattttgataaaaactatccaaacaacattcagtttgtttaatcaattctgcattattgt 33025230  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  33025229 atccaaacata 33025219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 463 - 570
Target Start/End: Original strand, 42275086 - 42275199
Alignment:
Q  463 ttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa------ctatctaaacaacattcagtttgtttaatcaattctgcattat 556  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||      ||||| |||||||||||||||||||||||||||||||||||||    
T  42275086 ttagctatgtccattttagtaattatacattcaaaagcaattttgataaaaaaaaaactatccaaacaacattcagtttgtttaatcaattctgcattat 42275185  T
Q  557 tgtatccaaacata 570  Q
    ||||||||||||||    
T  42275186 tgtatccaaacata 42275199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 455 - 570
Target Start/End: Complemental strand, 33329511 - 33329395
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| || ||||||||||||||||| |||    
T  33329511 atttgtatttagctatgtccattttagtaattatacattcaaaagcaattttgatcgaaactatccaaacaacatccattttgtttaatcaattctacat 33329412  T
Q  554 tattgtatccaaacata 570  Q
    |||||||||||||||||    
T  33329411 tattgtatccaaacata 33329395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 461 - 570
Target Start/End: Original strand, 45151161 - 45151275
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgat-----aaaactatctaaacaacattcagtttgtttaatcaattctgcatta 555  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||| |||||||||| | ||||||||||||||||| |||||    
T  45151161 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaaaaaaactatccaaacaacatttattttgtttaatcaattctacatta 45151260  T
Q  556 ttgtatccaaacata 570  Q
    |||||||||||||||    
T  45151261 ttgtatccaaacata 45151275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 461 - 570
Target Start/End: Original strand, 48181618 - 48181728
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| |||||||||||  ||||||||| ||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  48181618 atttagctatgtccatttcggtaattatatattcaaaagtaattttgataaaaactatccaaacaacattcagtttgtttaatcaattctgcattattgt 48181717  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  48181718 atccaaacata 48181728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 455 - 570
Target Start/End: Complemental strand, 39267212 - 39267096
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| ||||||||||||||||| | ||     
T  39267212 atttgtatttagctatgtccattttagtaattatacattcaaaagcagttttgatcaaaactatcaaaacaacatttagtttgtttaatcaattatacac 39267113  T
Q  554 tattgtatccaaacata 570  Q
    |||||||||||||||||    
T  39267112 tattgtatccaaacata 39267096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 475 - 570
Target Start/End: Original strand, 42074901 - 42074997
Alignment:
Q  475 attttagtaattatacattcaaaagcaattttgataa-aactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  42074901 attttagtaattatacattcaaaatcaattttgataagaactatccaaacaacattcagtttgtttaatcaattatgcactattgtatccaaacata 42074997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 455 - 570
Target Start/End: Complemental strand, 50392372 - 50392256
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| ||||||||| ||||||||||||||||||||| |||||||||| |||| |||| |||||| ||||| ||||||||||||||||| |||    
T  50392372 atttgtatttagctatgtccatattagtaattatacattcaaaatcaattttgatcaaaattatccaaacaatattcaatttgtttaatcaattctacat 50392273  T
Q  554 tattgtatccaaacata 570  Q
    |||||||||||||||||    
T  50392272 tattgtatccaaacata 50392256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 455 - 570
Target Start/End: Complemental strand, 44610385 - 44610270
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgataaaactatctaaacaacattcagtttgtttaatcaattctgcatt 554  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||| || |  |||||||||||| | ||||    
T  44610385 atttgtatttagctatgtccattttagtaattatacattcaaaatcaattttgatcaaactatccaaacaacatccattccgtttaatcaattttacatt 44610286  T
Q  555 attgtatccaaacata 570  Q
    ||||||||||||||||    
T  44610285 attgtatccaaacata 44610270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 83 - 226
Target Start/End: Complemental strand, 51128854 - 51128711
Alignment:
Q  83 tcaatcacccttcacaaatttaatctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaa 182  Q
    |||| |||||||| ||||||||||| ||||||||||| | || || ||||||||||||| || ||||| | || ||| |||||| | |||||||||||||    
T  51128854 tcaaccacccttcccaaatttaatccaaaaatttattaccatcagcttatataacaacatcatctcctacaaggaaaaattgtggtgaagagaacaacaa 51128755  T
Q  183 aaaggaaaaattctgctcaaaggataacaacaacaacaaggtaa 226  Q
     ||| |||||||||||||||| ||||||||||||||||||||||    
T  51128754 gaagaaaaaattctgctcaaaagataacaacaacaacaaggtaa 51128711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 83 - 226
Target Start/End: Original strand, 52692293 - 52692436
Alignment:
Q  83 tcaatcacccttcacaaatttaatctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaa 182  Q
    |||| |||||||| ||||||||||| ||||||||||| | || || ||||||||||||| || ||||| | || ||| |||||| | |||||||||||||    
T  52692293 tcaaccacccttcccaaatttaatccaaaaatttattaccatcagcttatataacaacatcatctcctacaaggaaaaattgtggtgaagagaacaacaa 52692392  T
Q  183 aaaggaaaaattctgctcaaaggataacaacaacaacaaggtaa 226  Q
     ||| |||||||||||||||| ||||||||||||||||||||||    
T  52692393 gaagaaaaaattctgctcaaaagataacaacaacaacaaggtaa 52692436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 461 - 570
Target Start/End: Original strand, 51230257 - 51230367
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| |||||  |||||||||||||||||||||||| ||| |||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||    
T  51230257 atttagctatgtttattttagtaattatacattcaaaatcaaatttgataaaaactatccaaacaacattcagtttgtttaatcaattttgcattattgt 51230356  T
Q  560 atccaaacata 570  Q
    || ||||||||    
T  51230357 attcaaacata 51230367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 455 - 568
Target Start/End: Original strand, 41536322 - 41536436
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| |||||||||||||| ||||||||||||||| |||||||| |||||||||| ||||| ||| |||||||||| |||| |||||||||||||| |||    
T  41536322 atttgtatttagttatgtcaattttagtaattatatattcaaaaacaattttgatcaaaaccatccaaacaacatttagttcgtttaatcaattctacat 41536421  T
Q  554 tattgtatccaaaca 568  Q
    ||||||||| |||||    
T  41536422 tattgtatctaaaca 41536436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 47697242 - 47697358
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||  |||||| ||||| ||||||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||    
T  47697242 atttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcat 47697341  T
Q  554 tattgtatccaaacata 570  Q
    ||||| |||||||||||    
T  47697342 tattgcatccaaacata 47697358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 28884225 - 28884341
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||  ||||||||||| |||||||||||||||||||  ||||||||| ||||||||| |||||||||||| | | ||||||||||| | |||    
T  28884225 atttgtatttaactatgtccatttcagtaattatacattcaaaaataattttgattaaaactatccaaacaacattcattctctttaatcaattatacat 28884324  T
Q  554 tattgtatccaaacata 570  Q
    |||||||||||||||||    
T  28884325 tattgtatccaaacata 28884341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 40237803 - 40237919
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||  ||||||||||||   |  |||||||||||| | |    
T  40237803 atttttatttagctatgtccattttaataattatacattcaaaagcaattttgataaaaactattcaaacaacattcatcctaattaatcaattctacgt 40237902  T
Q  554 tattgtatccaaacata 570  Q
    |||||||| ||||||||    
T  40237903 tattgtattcaaacata 40237919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 467 - 570
Target Start/End: Original strand, 44329194 - 44329298
Alignment:
Q  467 ttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaa 565  Q
    ||||||| ||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||| | | ||||||||||| | |||||| |||| |||    
T  44329194 ttatgtcaattttagtaattatacattcaaaagtaattttgatcaaaactatccaaacaacattcattctatttaatcaattttacattatcgtatacaa 44329293  T
Q  566 acata 570  Q
    |||||    
T  44329294 acata 44329298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 455 - 567
Target Start/End: Complemental strand, 45488654 - 45488541
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| |||||| ||||||||| |||||||||||||| |||||||||| |||| |||| | |  ||||| |||  |||||||||||| |||||    
T  45488654 atttgtatttagctatgtctattttagtacttatacattcaaaaacaattttgatcaaaaatatccacatgacatttagtgggtttaatcaattttgcat 45488555  T
Q  554 tattgtatccaaac 567  Q
    ||||||||||||||    
T  45488554 tattgtatccaaac 45488541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 536
Target Start/End: Complemental strand, 53686631 - 53686555
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttg 536  Q
    |||||| |||||| ||||||||||||||| ||||||||| ||||||||| ||||||||| |||||||||||||||||    
T  53686631 atttagctatgtctattttagtaattatatattcaaaagtaattttgataaaaactatccaaacaacattcagtttg 53686555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 472 - 570
Target Start/End: Complemental strand, 5104838 - 5104739
Alignment:
Q  472 tccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    |||||| |||||||  |||||||||||| ||||||||| |||| |||  |||||||||||| ||||||||||||| ||| ||||||| ||||||||||||    
T  5104838 tccattatagtaatcttacattcaaaagtaattttgatcaaaattattcaaacaacattcattttgtttaatcaaatctacattattatatccaaacata 5104739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 31813854 - 31813894
Alignment:
Q  298 ctgcaatgcttataaaatttgtttggttgcataatataaca 338  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  31813854 ctgcaatgcttataaaatttgtttggttgcataatataaca 31813894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 47141241 - 47141143
Alignment:
Q  83 tcaatcacccttcacaaatttaatctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaaca 181  Q
    |||| |||||||| ||||||||||| ||||||||||| | || || ||||||||||||| || ||||| | || ||| |||||| | ||||||||||||    
T  47141241 tcaaccacccttcccaaatttaatccaaaaatttattaccatcagcttatataacaacatcatctcctacaaggaaaaattgtggtgaagagaacaaca 47141143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 390
Target Start/End: Complemental strand, 51128639 - 51128545
Alignment:
Q  299 tgcaatgcttataaaatttgtttggttgcataatataacatctcttatgaatttctacaaacaaaaaatat---tgcattatatgtgtttgataa 390  Q
    ||||||||||||||||||||||||||| |||||  ||  | ||||||| ||||| ||||||  ||||||||   |||||| ||||||||||||||    
T  51128639 tgcaatgcttataaaatttgtttggttccataaattagtacctcttattaatttatacaaaggaaaaatattgctgcattgtatgtgtttgataa 51128545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 469 - 547
Target Start/End: Original strand, 40244059 - 40244138
Alignment:
Q  469 atgtccattttagtaattatacattcaaaagcaattttga-taaaactatctaaacaacattcagtttgtttaatcaatt 547  Q
    ||||||||||| ||||||||||||| |||| ||||||||| |||||||||| |||||| ||| | | | |||||||||||    
T  40244059 atgtccattttggtaattatacatttaaaaacaattttgattaaaactatccaaacaatatttattatatttaatcaatt 40244138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 636 - 666
Target Start/End: Original strand, 31813925 - 31813955
Alignment:
Q  636 attctatctaaagctaaaccaaacacacact 666  Q
    |||||||||||||||||||||||||||||||    
T  31813925 attctatctaaagctaaaccaaacacacact 31813955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 468 - 510
Target Start/End: Original strand, 46798717 - 46798759
Alignment:
Q  468 tatgtccattttagtaattatacattcaaaagcaattttgata 510  Q
    |||||||||||||| |||| |||||||| ||||||||||||||    
T  46798717 tatgtccattttagaaattttacattcagaagcaattttgata 46798759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 476 - 509
Target Start/End: Complemental strand, 49526818 - 49526785
Alignment:
Q  476 ttttagtaattatacattcaaaagcaattttgat 509  Q
    |||||||||||| |||||||||||||||||||||    
T  49526818 ttttagtaattacacattcaaaagcaattttgat 49526785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 178; Significance: 1e-95; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 5 - 222
Target Start/End: Original strand, 35604972 - 35605189
Alignment:
Q  5 tctccaagaatatttgcttttttctacctggaaccttaaattcattcactccactgtccacttttttctagctagaactcaatcacccttcacaaattta 104  Q
    |||||||  ||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| |||||||||||||||| |||||||||||||||||    
T  35604972 tctccaatcatatttgcttttttctacctggaacgttaaattcattcacttcactgttcacttttctctagctagaactcaaccacccttcacaaattta 35605071  T
Q  105 atctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaaaaaggaaaaattctgctcaaag 204  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  35605072 atctgaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaaaaaggaaaaattctgctcaaaa 35605171  T
Q  205 gataacaacaacaacaag 222  Q
    | ||||||||||||||||    
T  35605172 ggtaacaacaacaacaag 35605189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 160; E-Value: 7e-85
Query Start/End: Original strand, 395 - 570
Target Start/End: Original strand, 46407964 - 46408139
Alignment:
Q  395 tattagtattgtaataacttatattttaactatattgcacttaattatcctaatttagtaatttctatttagttatgtccattttagtaattatacattc 494  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  46407964 tattagtattgtaataacttatattttaactatattgcacttaattatcctaatttagtaatttctatttaactatgttcattttagtaattatacattc 46408063  T
Q  495 aaaagcaattttgataaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46408064 aaaagcaattttgataaaactatccaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 46408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 5 - 185
Target Start/End: Original strand, 46406579 - 46406759
Alignment:
Q  5 tctccaagaatatttgcttttttctacctggaaccttaaattcattcactccactgtccacttttttctagctagaactcaatcacccttcacaaattta 104  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||||| |||||||||||||||||    
T  46406579 tctccaaccatatttgcttttttctacctgaaaccttaaattcattcagtccactatccacttttctctagctagaactcaaccacccttcacaaattta 46406678  T
Q  105 atctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaaaaa 185  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  46406679 atctaaaaatttattgctattaagttatataacaacaccacctcttgctagcaaatattgtgctcaagagaacaacaaaaa 46406759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 395 - 566
Target Start/End: Original strand, 35606806 - 35606980
Alignment:
Q  395 tattagtattgtaataacttatattttaa--ctatattgcacttaattatcctaatttagtaatttctatttagttatgtccattttagtaattatacat 492  Q
    |||| ||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||    
T  35606806 tatttgtattgtaataacctatattttaagactatattgcacttaattatcctaatttagtaatttctatttagctatgtcaattttcgtaattatacat 35606905  T
Q  493 tcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaa 566  Q
    ||||||||||||||||| ||||||||  ||| || | ||| | |||||||||||||||| ||||||| |||||||    
T  35606906 tcaaaagcaattttgatcaaaactattcaaataaaaatcattatgtttaatcaattctgtattattgcatccaaa 35606980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 5271222 - 5271036
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  5271222 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 5271123  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  5271122 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 5271036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 15353640 - 15353826
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  15353640 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 15353739  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  15353740 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 15353826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 26821817 - 26822003
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  26821817 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 26821916  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  26821917 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 26822003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 50978542 - 50978356
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  50978542 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 50978443  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  50978442 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 50978356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 51488091 - 51487905
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  51488091 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 51487992  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  51487991 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 51487905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 461 - 570
Target Start/End: Original strand, 6706677 - 6706787
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||    
T  6706677 atttagctatgtccattttagtaattatacgttcaaaagcaattttgataaaaactatccaaacaacatttagtttgtttaatcaattctgcattattgt 6706776  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  6706777 atccaaacata 6706787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 470 - 570
Target Start/End: Complemental strand, 16342999 - 16342898
Alignment:
Q  470 tgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaaca 568  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16342999 tgtccattttagtaattatacgttcaaaagcaattttgataaaaactatccaaacaacattcagtttgtttaatcaattctgcattattgtatccaaaca 16342900  T
Q  569 ta 570  Q
    ||    
T  16342899 ta 16342898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 27000007 - 26999821
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  27000007 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 26999908  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||  |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  26999907 ttatacattcaaaagtaattttgatcaaaactattcaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 26999821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 35605264 - 35605356
Alignment:
Q  298 ctgcaatgcttataaaatttgtttggttgcataatataacatctcttatgaatttctacaaacaaaaaatattgcattatatgtgtttgataa 390  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  35605264 ctgcaatgcttataaaatttgtttggttgcataatataacatctcttatgaatttctacaaacaaaaaatattgtattatatgtatttgataa 35605356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 38843797 - 38843983
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  38843797 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 38843896  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| |||||||||  ||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  38843897 ttatacattcaaaagtaattttgatcaaaactatccgaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 38843983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 461 - 566
Target Start/End: Original strand, 7385774 - 7385883
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa----ctatctaaacaacattcagtttgtttaatcaattctgcattat 556  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||    ||||| |||||||||||||||||||||||||||||||||||||    
T  7385774 atttagctatctccattttagtaattatacattcaaaagcaattttgataaaaaaaactatccaaacaacattcagtttgtttaatcaattctgcattat 7385873  T
Q  557 tgtatccaaa 566  Q
    ||||||||||    
T  7385874 tgtatccaaa 7385883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 397 - 558
Target Start/End: Complemental strand, 7592921 - 7592747
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  7592921 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttttatttaactatgtctattttggtaa 7592822  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattg 558  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | ||||||||||||||||||||||||    
T  7592821 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 7592747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 468 - 570
Target Start/End: Complemental strand, 47655238 - 47655135
Alignment:
Q  468 tatgtccattttagtaattatacattcaaaagcaattttgataaaact-atctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaa 566  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| | ||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  47655238 tatgtccattttagtaattatacattcaaaaacaattttgataaaaattattcaaacaacattcagtttgtttaatcaattctgcattattgtatccaaa 47655139  T
Q  567 cata 570  Q
    ||||    
T  47655138 cata 47655135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 4484772 - 4484662
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| |||||  ||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| ||| |||||||||||||||||||||||    
T  4484772 atttagctatgtttattttagtaattatacattcaaaagcaattttgttaaaaactatccaaacaacattcaatttatttaatcaattctgcattattgt 4484673  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  4484672 atccaaacata 4484662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 461 - 570
Target Start/End: Original strand, 50031388 - 50031498
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||||||||||| ||||| |||||||||||||| ||||||||||||| |||||||||||    
T  50031388 atttagctatgtccattttagtaattatatattcaaaagtaattttgataaaaactatccaaacaacattcagtatgtttaatcaattatgcattattgt 50031487  T
Q  560 atccaaacata 570  Q
    ||| |||||||    
T  50031488 atcaaaacata 50031498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 11829562 - 11829678
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||| ||||||| |||||||||||||||||   |    
T  11829562 atttttatttagatatgtccattttagtaattatacatttaaaagcaattttgatcaaaactatccaaacgacattcattttgtttaatcaattctatgt 11829661  T
Q  554 tattgtatccaaacata 570  Q
    |||||||||||||||||    
T  11829662 tattgtatccaaacata 11829678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 455 - 570
Target Start/End: Complemental strand, 31100009 - 31099893
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||| | | ||||||||| ||| |||    
T  31100009 atttgtatttagctatgtccattttagtaattatacattcaaaagcaattttgatcaaaaccatccaaacaacattcattctctttaatcaactctacat 31099910  T
Q  554 tattgtatccaaacata 570  Q
    |||||||||||||||||    
T  31099909 tattgtatccaaacata 31099893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 41512696 - 41512811
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| ||||||||||||||| ||||||||||||||| |||||||||| ||||| ||| |||||||||||||||||||| ||||||||||||     
T  41512696 atttgtatttagctatgtccattttagtgattatacattcaaaatcaattttgatcaaaacaatccaaacaacattcagtttgttttatcaattctgca- 41512794  T
Q  554 tattgtatccaaacata 570  Q
    ||||||||| |||||||    
T  41512795 tattgtatctaaacata 41512811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 460 - 570
Target Start/End: Complemental strand, 46033279 - 46033169
Alignment:
Q  460 tatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattg 558  Q
    ||||||| |||||| |||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||| ||||||||||||||| ||||||| ||    
T  46033279 tatttagctatgtcaattttagtaattatacattcaaaatcaattttgataaaaactatccaaacaacattcaatttgtttaatcaattatgcatta-tg 46033181  T
Q  559 tatccaaacata 570  Q
    ||| ||||||||    
T  46033180 tattcaaacata 46033169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 455 - 570
Target Start/End: Complemental strand, 42137245 - 42137128
Alignment:
Q  455 atttctatttagttatgtccatttt-agtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgca 552  Q
    |||| ||||||| ||||| |||||| | |||||||||||||||||||||||||||| ||||||||| |||||||||||| | ||||||||||||||||||    
T  42137245 atttgtatttagctatgttcatttttaataattatacattcaaaagcaattttgatcaaaactatccaaacaacattcaatctgtttaatcaattctgca 42137146  T
Q  553 ttattgtatccaaacata 570  Q
    ||||||||  ||||||||    
T  42137145 ttattgtacacaaacata 42137128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 27576685 - 27576801
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| | |||||||||||||||   |    
T  27576685 atttttatttagctatgtccattttagtaattatacattcaaaagcaaatttgatcaaaactatccaaacaacattcattctgtttaatcaattctatgt 27576784  T
Q  554 tattgtatccaaacata 570  Q
    ||| |||| ||||||||    
T  27576785 tatcgtattcaaacata 27576801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 455 - 570
Target Start/End: Complemental strand, 36496026 - 36495910
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||  |||||| ||||| ||||||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||    
T  36496026 atttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcat 36495927  T
Q  554 tattgtatccaaacata 570  Q
    ||||| |||||||||||    
T  36495926 tattgcatccaaacata 36495910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 38627769 - 38627885
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||  |||||| ||||| ||||||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||    
T  38627769 atttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcat 38627868  T
Q  554 tattgtatccaaacata 570  Q
    ||||| |||||||||||    
T  38627869 tattgcatccaaacata 38627885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 45179877 - 45179993
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| |||||||||||||||||||||||||| |||| |||||||||| |||||| || |||||||||||| |  |||||||||||||| |||    
T  45179877 atttgtatttagctatgtccattttagtaattatacatttaaaaacaattttgatcaaaactgtcaaaacaacattcattccgtttaatcaattctacat 45179976  T
Q  554 tattgtatccaaacata 570  Q
    |||| ||||||||||||    
T  45179977 tattttatccaaacata 45179993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 468 - 570
Target Start/End: Complemental strand, 11050662 - 11050558
Alignment:
Q  468 tatgtccattttagtaattatacattcaaaagcaattttgat-aaaactat-ctaaacaacattcagtttgtttaatcaattctgcattattgtatccaa 565  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||| |||||||||||||||||||||||  |||||| | |    
T  11050662 tatgtcctttttagtaattatacattcaaaagcaattttgatcaaaactatccaaaacaacatttagtttgtttaatcaattctgcatccttgtattcta 11050563  T
Q  566 acata 570  Q
    |||||    
T  11050562 acata 11050558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 455 - 570
Target Start/End: Complemental strand, 50521162 - 50521047
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| |||||||||||| ||||||||||||||||| |||||||| |||||||||| ||||||||| |||||||||||| | |||||||| |||||  | |    
T  50521162 atttttatttagttatg-ccattttagtaattatatattcaaaaacaattttgatcaaaactatccaaacaacattcattctgtttaattaattccacgt 50521064  T
Q  554 tattgtatccaaacata 570  Q
    |||||||||||||||||    
T  50521063 tattgtatccaaacata 50521047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 476 - 570
Target Start/End: Original strand, 1763271 - 1763366
Alignment:
Q  476 ttttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||| || |  | |||||||||||| ||||||||||||||||||||    
T  1763271 ttttagtaattatacattcaaaaacaattttgatcaaaactatctaaacaacatccattccgcttaatcaattctacattattgtatccaaacata 1763366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 461 - 532
Target Start/End: Complemental strand, 13509477 - 13509404
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgat--aaaactatctaaacaacattcag 532  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  13509477 atttagctatgtccattttagtaattatacattcaaaagcaattttgataaaaaactatccaaacaacattcag 13509404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 501 - 570
Target Start/End: Original strand, 24076062 - 24076132
Alignment:
Q  501 aattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24076062 aattttgatcaaaactatccaaacaacattcagtttgtttaatcaattctacattattgtatccaaacata 24076132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 481 - 566
Target Start/End: Original strand, 44740674 - 44740760
Alignment:
Q  481 gtaattatacattcaaaagcaattttgataaaact-atctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaa 566  Q
    ||||||||||||| ||||  ||||||||||||| | ||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  44740674 gtaattatacatttaaaaataattttgataaaaattatccaaacaacattcagtttgtttaatcaattctacattattgtatccaaa 44740760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 38843517 - 38843632
Alignment:
Q  83 tcaatcacccttcacaaatttaatctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaa 182  Q
    |||| |||||||| ||||||||||| ||||||||||| | || || ||||||||||||| || ||||| | || ||| |||||| | |||||||||||||    
T  38843517 tcaaccacccttcccaaatttaatccaaaaatttattaccatcagcttatataacaacatcatctcctacaaggaaaaattgtggtgaagagaacaacaa 38843616  T
Q  183 aaaggaaaaattctgc 198  Q
     ||| |||||||||||    
T  38843617 gaagaaaaaattctgc 38843632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 468 - 570
Target Start/End: Original strand, 49431183 - 49431285
Alignment:
Q  468 tatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaa 566  Q
    |||||||||||||||||||||| ||||||||| |||||||||  ||| |||||||| |||||| | |||||||||| |||| ||||||||| ||| ||||    
T  49431183 tatgtccattttagtaattatatattcaaaagtaattttgatcgaaattatctaaataacattta-tttgtttaataaattatgcattattatatacaaa 49431281  T
Q  567 cata 570  Q
    ||||    
T  49431282 cata 49431285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 27576326 - 27576395
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctattt 464  Q
    ||||||||||||||||||||||||||  || |||||||||||||||||  ||||||||||||||||||||    
T  27576326 ttagtattgtaataacttatattttaggaccatattgcacttaattattttaatttagtaatttctattt 27576395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 390
Target Start/End: Original strand, 26821642 - 26821736
Alignment:
Q  299 tgcaatgcttataaaatttgtttggttgcataatataacatctcttatgaatttctacaaacaaaaaatat---tgcattatatgtgtttgataa 390  Q
    ||||||||||||||||||||||||||| |||||  ||  | ||||||| ||||| ||||||  ||||||||   |||||| ||||||||||||||    
T  26821642 tgcaatgcttataaaatttgtttggttccataaattagtacctcttattaatttatacaaaggaaaaatattgctgcattgtatgtgtttgataa 26821736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 472 - 525
Target Start/End: Original strand, 40709152 - 40709205
Alignment:
Q  472 tccattttagtaattatacattcaaaagcaattttgataaaactatctaaacaa 525  Q
    |||||||| ||||| |||| ||||||||||||||||||  ||||||||||||||    
T  40709152 tccattttggtaatgatactttcaaaagcaattttgattcaactatctaaacaa 40709205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 358 - 390
Target Start/End: Original strand, 46406752 - 46406784
Alignment:
Q  358 aacaaaaaatattgcattatatgtgtttgataa 390  Q
    |||||||||||||||||||||||||||||||||    
T  46406752 aacaaaaaatattgcattatatgtgtttgataa 46406784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 164; Significance: 3e-87; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 395 - 570
Target Start/End: Complemental strand, 21515310 - 21515135
Alignment:
Q  395 tattagtattgtaataacttatattttaactatattgcacttaattatcctaatttagtaatttctatttagttatgtccattttagtaattatacattc 494  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  21515310 tattagtattgtaataacttatattttaactatattgcacttaattatcctaatttagtaatttctatttagctatgtccatattagtaattatacattc 21515211  T
Q  495 aaaagcaattttgataaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21515210 aaaagcaattttgataaaactatccaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 21515135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 30019700 - 30019886
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  30019700 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 30019799  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  30019800 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 30019886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 461 - 558
Target Start/End: Original strand, 10683721 - 10683819
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattg 558  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  10683721 atttagctatgtccattttagtaattatacattcaaaagaaattttgataaaaactatccaaacaacattcagtttgtttaattaattctgcattattg 10683819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 455 - 570
Target Start/End: Complemental strand, 31745560 - 31745444
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| | | ||||||||||||| | | |    
T  31745560 atttttatttagctatgtccattttagtaattatacattcaaaagcaattttgatcaaaactatccaaacaacatttattctgtttaatcaattatacgt 31745461  T
Q  554 tattgtatccaaacata 570  Q
    ||| |||||||||||||    
T  31745460 tatcgtatccaaacata 31745444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 455 - 549
Target Start/End: Original strand, 4147378 - 4147473
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattct 549  Q
    |||| |||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||| | |||||||||||||||    
T  4147378 atttttatttagttatgtctattttagtaattatacattcaagagcaattttgatcaaaactatccaaacaacattcattctgtttaatcaattct 4147473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 455 - 562
Target Start/End: Complemental strand, 20838060 - 20837952
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||  ||||||||||||||||||||||  |||||||||||||||||| |||| |||  |||||||||||| ||| ||||||||||| |||||    
T  20838060 atttgtatttaactatgtccattttagtaattatatgttcaaaagcaattttgatcaaaattattcaaacaacattcaatttatttaatcaattatgcat 20837961  T
Q  554 tattgtatc 562  Q
    |||||||||    
T  20837960 tattgtatc 20837952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 27825545 - 27825661
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| ||||||||||||| |||||||||||| ||||| ||||||||| ||||||||| |||||||||||| | | |||||||||||||  ||    
T  27825545 atttgtatttagctatgtccattttaataattatacatttaaaagtaattttgatcaaaactatccaaacaacattcattctatttaatcaattctatat 27825644  T
Q  554 tattgtatccaaacata 570  Q
    ||| || ||||||||||    
T  27825645 tatcgtgtccaaacata 27825661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 472 - 570
Target Start/End: Original strand, 921614 - 921712
Alignment:
Q  472 tccattttagtaattatacattcaaaagcaattttgataaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||| |||||||||||||||||  ||||||||| |||||||| ||||||||| || | |||||||||||| || | ||||||||||||||||||    
T  921614 tccattttaataattatacattcaaaaataattttgatcaaactatccaaacaacatccattctgtttaatcaatcctactttattgtatccaaacata 921712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 397 - 464
Target Start/End: Complemental strand, 31745933 - 31745864
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctattt 464  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| ||| |||||||||||||| |||||    
T  31745933 ttagtattgtaataacttatattttaggactatattgcacttaataatcttaatttagtaatttatattt 31745864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 636 - 667
Target Start/End: Complemental strand, 21515114 - 21515083
Alignment:
Q  636 attctatctaaagctaaaccaaacacacacta 667  Q
    ||||||||||||||||||||||||||||||||    
T  21515114 attctatctaaagctaaaccaaacacacacta 21515083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 472 - 509
Target Start/End: Complemental strand, 21255031 - 21254994
Alignment:
Q  472 tccattttagtaattatacattcaaaagcaattttgat 509  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  21255031 tccattttggtaattatactttcaaaagcaattttgat 21254994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 6e-64; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 395 - 570
Target Start/End: Original strand, 56560984 - 56561149
Alignment:
Q  395 tattagtattgtaataacttatattttaactatattgcacttaattatcctaatttagtaatttctatttagttatgtccattttagtaattatacattc 494  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||| |||||||||||||||||||||||||||    
T  56560984 tattagtattgtaataacttatattttaactatattgcacttaattatcctaatttagt----------tagctatgtccattttagtaattatacattc 56561073  T
Q  495 aaaagcaattttgataaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  56561074 aaaagcaattttgataaaactatccaaccaacattcagtttgtttaatcaattctgcgttattgtatccaaacata 56561149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 52058192 - 52057954
Alignment:
Q  5 tctccaagaatatttgcttttttctacctggaaccttaaattcattcactccactgtccacttttttctagctagaactcaatcacccttcacaaattta 104  Q
    |||||||  |||||||||||||||||| || ||| ||||||||||||||| |||||| ||||||| |||||||| ||||||| |||||||||||||||||    
T  52058192 tctccaaccatatttgcttttttctacttgaaacgttaaattcattcacttcactgttcacttttctctagctataactcaaccacccttcacaaattta 52058093  T
Q  105 atctaaaaat-----------------ttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaaaaagg 187  Q
    |||| |||||                 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  52058092 atctgaaaataaatttaatctgaaaatttattgctattaggttatataacaacaccacctcctactagcaaatattgtgctcaagagaacaacaaaaagg 52057993  T
Q  188 aaaaattctgctcaaaggataacaacaacaacaaggtaa 226  Q
    |||  || |||||||| | ||||||||||||||||||||    
T  52057992 aaattttttgctcaaaaggtaacaacaacaacaaggtaa 52057954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 30417944 - 30417834
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  30417944 atttagttatgtctattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacattcagtttgtttaatcaattctgcattattgt 30417845  T
Q  560 atccaaacata 570  Q
    ||| |||||||    
T  30417844 atctaaacata 30417834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 24035817 - 24035631
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  24035817 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 24035718  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  24035717 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 24035631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 24247027 - 24247213
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  24247027 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 24247126  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  24247127 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 24247213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 39382635 - 39382449
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  39382635 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 39382536  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  39382535 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 39382449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 49128138 - 49128324
Alignment:
Q  397 ttagtattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctatttagtt----------atgtccattttagtaa 484  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||          ||||| ||||| ||||    
T  49128138 ttagtattgtaataccttatattttaggactatattgcacttaattatcttaatttagtaatttctatttatttgtatttaactatgtctattttggtaa 49128237  T
Q  485 ttatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||    
T  49128238 ttatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattgcatccaaacata 49128324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 455 - 570
Target Start/End: Complemental strand, 50523424 - 50523308
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| ||||||||||||||||||||||| ||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  50523424 atttgtatttagatatgtccattttagtaattataccttcaaaatcaattttgatcaaaactatccaaacaacattcagtttgtttaatcaattctgcat 50523325  T
Q  554 tattgtatccaaacata 570  Q
    |||||||||||||||||    
T  50523324 tattgtatccaaacata 50523308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 28963407 - 28963297
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||    
T  28963407 atttagctatgtccattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacattcagtttgtttaatcaattttgcattattgt 28963308  T
Q  560 atccaaacata 570  Q
    ||| |||||||    
T  28963307 atctaaacata 28963297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 29385595 - 29385485
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaact-atctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||| |||||||||||    
T  29385595 atttagctatgtccattttagtaattatacattcaaaagcaattttgataaaaattatccaaacaacattcagtttgtttaatcaattatgcattattgt 29385496  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  29385495 atccaaacata 29385485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 460 - 570
Target Start/End: Original strand, 26459535 - 26459646
Alignment:
Q  460 tatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattg 558  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| |||||||||||| ||||||||||||||| ||||||||||    
T  26459535 tatttagttatgtccattttagtaattatactttcaaaagtaattttgatcaaaactatccaaacaacattcaatttgtttaatcaattttgcattattg 26459634  T
Q  559 tatccaaacata 570  Q
    ||||||||||||    
T  26459635 tatccaaacata 26459646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 53663184 - 53663074
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||||||| |||||||||||    
T  53663184 atttagttatgtctattttagtaattatacattcaaaaacaattttgttaaaaactatccaaacaacattcagtttgtttaatcaattttgcattattgt 53663085  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  53663084 atccaaacata 53663074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 455 - 570
Target Start/End: Complemental strand, 16202688 - 16202572
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| | | ||||||||||||| |||    
T  16202688 atttgtatttagctatgtccattttagtaattatacattcaaaagcaattttgatcaaaactatccaaacaacattcattatatttaatcaattctacat 16202589  T
Q  554 tattgtatccaaacata 570  Q
    |||||||||||||||||    
T  16202588 tattgtatccaaacata 16202572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 39733363 - 39733479
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| ||||||| |||||||||||||||||||||||  ||||||||| ||||||||| |||||||||||||||||||||||||||||| |||    
T  39733363 atttgtatttagctatgtccgttttagtaattatacattcaaaattaattttgatcaaaactatccaaacaacattcagtttgtttaatcaattctacat 39733462  T
Q  554 tattgtatccaaacata 570  Q
    |||||||||||||||||    
T  39733463 tattgtatccaaacata 39733479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 298 - 390
Target Start/End: Complemental strand, 52057882 - 52057790
Alignment:
Q  298 ctgcaatgcttataaaatttgtttggttgcataatataacatctcttatgaatttctacaaacaaaaaatattgcattatatgtgtttgataa 390  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  52057882 ctgcaatgcttataaaatttgtttggttgcataatataacatctcttatgaatttctacaaacaaaaacaattgtattatatgtgtttgataa 52057790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 461 - 570
Target Start/End: Original strand, 45106330 - 45106440
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| |||||| |||||| ||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||    
T  45106330 atttagctatgtctattttattaattatacattcaaaatcaattttgataaaaactatccaaacaacattcagtttgtttaatcaattttgcattattgt 45106429  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  45106430 atccaaacata 45106440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 22605906 - 22605798
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||  ||||||||||||| ||||||||||||    
T  22605906 atttagctatgtcaattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacattca--ttgtttaatcaatactgcattattgt 22605809  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  22605808 atccaaacata 22605798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 461 - 570
Target Start/End: Original strand, 38768352 - 38768458
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaactatctaaacaacattcagtttgtttaatcaattctgcattattgta 560  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||   |||| |||||||||||| |||||||||||||||||||| |||||||    
T  38768352 atttagctatgtccattttagtaattatacattcaaaagcaattttgataa---tatccaaacaacattcattttgtttaatcaattctgcagtattgta 38768448  T
Q  561 tccaaacata 570  Q
    |||| |||||    
T  38768449 tccagacata 38768458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 469 - 570
Target Start/End: Complemental strand, 53403667 - 53403565
Alignment:
Q  469 atgtccattttagtaattatacattcaaaagcaattttgataaaact-atctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaac 567  Q
    |||||||||||||||||||||||||||||| |||||||||||||| | ||| ||| |||||||||||||||||||||||| |||||||||||||||||||    
T  53403667 atgtccattttagtaattatacattcaaaatcaattttgataaaaattatccaaataacattcagtttgtttaatcaattatgcattattgtatccaaac 53403568  T
Q  568 ata 570  Q
    |||    
T  53403567 ata 53403565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 83 - 226
Target Start/End: Complemental strand, 24037901 - 24037758
Alignment:
Q  83 tcaatcacccttcacaaatttaatctaaaaatttattgctattaggttatataacaacaccacctcctgctagcaaatattgtgctcaagagaacaacaa 182  Q
    |||| |||||||| ||||||||||| ||||||||||| | || || ||||||||||||| || ||||| | || ||| |||||| | |||||||||||||    
T  24037901 tcaaccacccttcccaaatttaatccaaaaatttattaccatcagcttatataacaacatcatctcctacaaggaaaaattgtggtgaagagaacaacaa 24037802  T
Q  183 aaaggaaaaattctgctcaaaggataacaacaacaacaaggtaa 226  Q
     ||| |||||||||||||||| ||||||||||||||||||||||    
T  24037801 gaagaaaaaattctgctcaaaagataacaacaacaacaaggtaa 24037758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 455 - 566
Target Start/End: Complemental strand, 5937471 - 5937359
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||  ||||||| ||||||||||||||||||||||| |||||||||| |||| |||  ||||||||||||||||||||||||||||||||||    
T  5937471 atttgtatttaactatgtccgttttagtaattatacattcaaaatcaattttgatcaaaaatattcaaacaacattcagtttgtttaatcaattctgcat 5937372  T
Q  554 tattgtatccaaa 566  Q
    |||||||| ||||    
T  5937371 tattgtattcaaa 5937359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 455 - 570
Target Start/End: Complemental strand, 51833614 - 51833498
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||| | ||||||||||||||| | |    
T  51833614 atttttatttagctatgtccattttagtaattatacattcaaaagcaattttgttcaaaactatccaaacaacattcattctgtttaatcaattctacgt 51833515  T
Q  554 tattgtatccaaacata 570  Q
    ||| |||| ||||||||    
T  51833514 tatcgtattcaaacata 51833498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 28912158 - 28912271
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||  || ||||||||||||  |||    
T  28912158 atttttatttaattatgtccattttagtaattatacattcaaaagcaa-tttgatcaaaattatctaaacaacattca--ttctttaatcaattccacat 28912254  T
Q  554 tattgtatccaaacata 570  Q
    |||||||||||||||||    
T  28912255 tattgtatccaaacata 28912271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 490 - 570
Target Start/End: Original strand, 48407491 - 48407572
Alignment:
Q  490 cattcaaaagcaattttgataaaact-atctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    |||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  48407491 cattcaaaagcaattttgataaaaattatccaaacaacattcattttgtttaatcaattctgcattattgtatccaaacata 48407572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 36212792 - 36212882
Alignment:
Q  481 gtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    |||||||||||||||||||  ||||| || ||||||||||||||||||| || ||| ||||||||| | |||||||||| |||||||||||    
T  36212792 gtaattatacattcaaaagtgattttaatcaaaactatctaaacaacatacattttatttaatcaaatatgcattattgcatccaaacata 36212882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 401 - 464
Target Start/End: Complemental strand, 51833981 - 51833916
Alignment:
Q  401 tattgtaataacttatatttta--actatattgcacttaattatcctaatttagtaatttctattt 464  Q
    ||||||||||||||||||||||  | ||||||||||||||||||| ||||||||||||||||||||    
T  51833981 tattgtaataacttatattttaggattatattgcacttaattatcttaatttagtaatttctattt 51833916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 8510688 - 8510804
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||  ||| ||||||||| ||||||||||||||||| |||||||||| |||| ||   |||||||||| | | | ||| ||||||| |||||    
T  8510688 atttgtatttaactatatccattttaataattatacattcaaaaacaattttgatcaaaattaatcaaacaacatttattctattttatcaattatgcat 8510787  T
Q  554 tattgtatccaaacata 570  Q
    |||||||||||||||||    
T  8510788 tattgtatccaaacata 8510804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 523 - 570
Target Start/End: Original strand, 49724378 - 49724425
Alignment:
Q  523 caacattcagtttgtttaatcaattctgcattattgtatccaaacata 570  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  49724378 caacattcagtttgtttaatcaattatgcattattgtatccaaacata 49724425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 390
Target Start/End: Complemental strand, 24037686 - 24037592
Alignment:
Q  299 tgcaatgcttataaaatttgtttggttgcataatataacatctcttatgaatttctacaaacaaaaaatat---tgcattatatgtgtttgataa 390  Q
    ||||||||||||||||||||||||||| |||||  ||  | ||||||| ||||| ||||||  ||||||||   |||||| ||||||||||||||    
T  24037686 tgcaatgcttataaaatttgtttggttccataaattagtacctcttattaatttatacaaaggaaaaatattgctgcattgtatgtgtttgataa 24037592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 461 - 507
Target Start/End: Original strand, 49724332 - 49724377
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttg 507  Q
    |||||| |||||||||||||||||||||| |||||||| ||||||||    
T  49724332 atttagctatgtccattttagtaattatatattcaaaa-caattttg 49724377  T

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Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 636 - 670
Target Start/End: Original strand, 56561215 - 56561249
Alignment:
Q  636 attctatctaaagctaaaccaaacacacactaagt 670  Q
    ||||||||||||| |||||||||||||||||||||    
T  56561215 attctatctaaagttaaaccaaacacacactaagt 56561249  T

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Target: scaffold0068 (Bit Score: 91; Significance: 1e-43; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 461 - 570
Target Start/End: Original strand, 38262 - 38372
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  38262 atttagctatgtccattttagtaattaaacattcaaaagcaattttgataaaaactatcgaaacaacattcagtttgtttaatcaattctgcattattgt 38361  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  38362 atccaaacata 38372  T

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Target: scaffold0097 (Bit Score: 87; Significance: 3e-41; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 32609 - 32499
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgataaaa-ctatctaaacaacattcagtttgtttaatcaattctgcattattgt 559  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||| |||||||||||    
T  32609 atttagctatgtccattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacattcattttgtttaatcaattatgcattattgt 32510  T
Q  560 atccaaacata 570  Q
    |||||||||||    
T  32509 atccaaacata 32499  T

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Target: scaffold0184 (Bit Score: 85; Significance: 4e-40; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 455 - 570
Target Start/End: Complemental strand, 9328 - 9212
Alignment:
Q  455 atttctatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcat 553  Q
    |||| ||||||| |||||||||||||||||||||||||| |||| |||||||||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  9328 atttgtatttagctatgtccattttagtaattatacatttaaaatcaattttgatcaaaactatccaaacaacattcagtttgtttaatcaattatgcat 9229  T
Q  554 tattgtatccaaacata 570  Q
    |||||||||||||||||    
T  9228 tattgtatccaaacata 9212  T

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Target: scaffold0006 (Bit Score: 71; Significance: 9e-32; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 468 - 561
Target Start/End: Original strand, 92103 - 92199
Alignment:
Q  468 tatgtccattttagtaattatacattcaaaagcaattttgat---aaaactatctaaacaacattcagtttgtttaatcaattctgcattattgtat 561  Q
    ||||||||||||||||||||||||||||||||||||||||||   |||||||||  ||||||||| |||||||||||||||||||||||||||||||    
T  92103 tatgtccattttagtaattatacattcaaaagcaattttgataaaaaaactatcctaacaacatttagtttgtttaatcaattctgcattattgtat 92199  T

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Target: scaffold0808 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 461 - 570
Target Start/End: Original strand, 4646 - 4757
Alignment:
Q  461 atttagttatgtccattttagtaattatacattcaaaagcaattttgat--aaaactatctaaacaacattcagtttgtttaatcaattctgcattattg 558  Q
    |||||| ||||||||||| |||||||||||||||||||| |||||||||  |||| |||| ||||||| ||||| |||||||||||||||| ||||||||    
T  4646 atttagctatgtccatttcagtaattatacattcaaaagaaattttgataaaaaaatatccaaacaacgttcagcttgtttaatcaattctacattattg 4745  T
Q  559 tatccaaacata 570  Q
    ||||||||||||    
T  4746 tatccaaacata 4757  T

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Target: scaffold0069 (Bit Score: 61; Significance: 9e-26; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 468 - 561
Target Start/End: Original strand, 17377 - 17474
Alignment:
Q  468 tatgtccattttagtaattatacattcaaaagcaattttgataaaa----ctatctaaacaacattcagtttgtttaatcaattctgcattattgtat 561  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||    |||||  ||||||||| |||||||||||||||||||||||||||||||    
T  17377 tatgtccattttagtaattatatattcaaaaacaattttgataaaaaaaactatccgaacaacatttagtttgtttaatcaattctgcattattgtat 17474  T

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Target: scaffold0003 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 460 - 567
Target Start/End: Complemental strand, 301814 - 301706
Alignment:
Q  460 tatttagttatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatctaaacaacattcagtttgtttaatcaattctgcattattg 558  Q
    |||||| |||||||  |||||||| |||||||||||||| |||||||||| ||||||||| ||||||||||||   ||||||||||||| ||||||||      
T  301814 tatttaattatgtcggttttagtacttatacattcaaaaacaattttgatcaaaactatccaaacaacattcaacgtgtttaatcaattttgcattataa 301715  T
Q  559 tatccaaac 567  Q
    |||||||||    
T  301714 tatccaaac 301706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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