View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0583_low_80 (Length: 356)
Name: NF0583_low_80
Description: NF0583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0583_low_80 |
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Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 26135796 - 26135526
Alignment:
| Q |
1 |
tcatcaacaatgtaatgaaattcttagaaaccgagatacataaaattcaatgaggatcaaaaagtttttgtttcttaaaaattcctatatatttcaacat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26135796 |
tcatcaacaatgtaatgaaattcttagaaaccgagatacataaaattcaacgaggatcaaaaagtttttgtttcttaaaaattcctatatatttcaacat |
26135697 |
T |
|
| Q |
101 |
atgcacaagatagaaaacaccagagaatatagacaataagatgcattattgatacaacatgatgtattattaatagcagttaaaaccaacaaagtcacca |
200 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
26135696 |
atgcacaagatagaaagcaccagagaatatagacaataagatgcattattgatacaacatgatgtattattaataggtgttaaaaccaacaaagtc---- |
26135601 |
T |
|
| Q |
201 |
taaatactagctattgctatgtgattgtactttgtgacaatagaaaaagcataacagaaccataatcatttttctgtg |
278 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26135600 |
---atactagctattgctatgtgattgtactttgtgacaatagaaaaagcataacagaaccataatcatttttctgtg |
26135526 |
T |
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