View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0583_low_91 (Length: 334)
Name: NF0583_low_91
Description: NF0583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0583_low_91 |
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Alignment Details
Target: chr1 (Bit Score: 312; Significance: 1e-176; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 13367712 - 13367389
Alignment:
| Q |
1 |
tgtatgatttccatggtccttttaaaatattttgttacttgtaatttgtaaataataatatatctgttgtttatacgtggaatgatcaagtgttgtcata |
100 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
13367712 |
tgtatgatttccatggtccttttaaagtattttgttacttgtaatttgtaaataataatatatcttttgtttatacgtggaatgatcaagtgttgtcata |
13367613 |
T |
|
| Q |
101 |
taagttgcaacttgtatactgcttcttatcctacagtgtggttatgtattctaaagctggcctcaatatatgtgcataataaataacaaccatgcctttt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13367612 |
taagttgcaacttgtatactgcttcttatcctacagtgtggttatgtattctaaagctggcctcaatatatgtgcataataaataacaaccatgcctttt |
13367513 |
T |
|
| Q |
201 |
ctcacttttgcttatcgctacatgcatcattcaaccctatgattttgcgtaggacatatggagggttgacatttggtatgtttaggttctcttatatagt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13367512 |
ctcacttttgcttatcgctacatgcatcattcaaccctatgattttgtgtaggacatatggagggttgacatttggtatgtttaggttctcttatatagt |
13367413 |
T |
|
| Q |
301 |
tttatcactgttcaatgccctttg |
324 |
Q |
| |
|
|||||||||||||||||||||||| |
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|
| T |
13367412 |
tttatcactgttcaatgccctttg |
13367389 |
T |
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