View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0584_high_9 (Length: 351)
Name: NF0584_high_9
Description: NF0584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0584_high_9 |
 | |
|
| [»] scaffold0491 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 15)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 92 - 334
Target Start/End: Complemental strand, 2338619 - 2338377
Alignment:
| Q |
92 |
tggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcaagtaaaaccttcacattatttggaagtgggagacgc |
191 |
Q |
| |
|
|||||||| || ||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2338619 |
tggtcgagcgcaagggttgagatttaagcatccaaatgctactacggcaacacgaattatgtcaagtaaaaccttcacattatttggaagtgggagacgc |
2338520 |
T |
|
| Q |
192 |
tggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaaagtttcaagtgcca |
291 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
2338519 |
tggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagctatgatagtatatcaccagggtgtcttcccattaaagtttcaagtgcca |
2338420 |
T |
|
| Q |
292 |
ctactccaaagctatatacatcacacttttcactcacaaccat |
334 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
2338419 |
ctactccaaaactatatacatcgcacttttcactcacaaccat |
2338377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 92 - 334
Target Start/End: Complemental strand, 2330763 - 2330521
Alignment:
| Q |
92 |
tggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcaagtaaaaccttcacattatttggaagtgggagacgc |
191 |
Q |
| |
|
|||||||| || ||||||||||||||||||| ||||||| ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
2330763 |
tggtcgagcgcaagggttgagatttaagcatccaaatgctactacggcaacacgaattatgtccagtaaaacctttacattatttggaagtgggagacgt |
2330664 |
T |
|
| Q |
192 |
tggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaaagtttcaagtgcca |
291 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
2330663 |
tggtctaatacttcacataatttcatcccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcccattaaagtttcaagtgcca |
2330564 |
T |
|
| Q |
292 |
ctactccaaagctatatacatcacacttttcactcacaaccat |
334 |
Q |
| |
|
| |||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
2330563 |
caactccaaaactatatacatcgcacttttcactcacaaccat |
2330521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 79 - 340
Target Start/End: Complemental strand, 2322162 - 2321901
Alignment:
| Q |
79 |
cacacttcatttctggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcaagtaaaaccttcacattatttgg |
178 |
Q |
| |
|
|||| |||||| |||||||||| ||| |||||||||||||| |||||||| | | ||||||||||||||||||||||||||| |||||||||| || |
|
|
| T |
2322162 |
cacatttcattgttggtcgagagaaaggattgagatttaagcaagcaaatgctattgtggcaacacgaattatgtcaagtaaaaccatcacattattcgg |
2322063 |
T |
|
| Q |
179 |
aagtgggagacgctggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaaa |
278 |
Q |
| |
|
|||| | ||||| |||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
2322062 |
aagtagaagacgttggtctaatacttcacataacttaatgccttgagttgatgctaactgaagtgatgacagtatatcaccagggtgtcttcccattaaa |
2321963 |
T |
|
| Q |
279 |
gtttcaagtgccactactccaaagctatatacatcacacttttcactcacaaccatagtata |
340 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
2321962 |
gtttcaagtgccacaactccaaagctatatacatcgcacttttcactcacaaccatagtata |
2321901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 112 - 340
Target Start/End: Original strand, 3954500 - 3954728
Alignment:
| Q |
112 |
gatttaagcatgcaaatgcgactacagcaacacgaattatgtcaagtaaaaccttcacattatttggaagtgggagacgctggtctaatacttcacataa |
211 |
Q |
| |
|
|||||||||||||| |||| |||||| ||||| ||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
3954500 |
gatttaagcatgcagatgctactacaacaacatgaattatgtcaagtaaaactttcacatcatttggaagtgggagacgttggtctaatacttcacataa |
3954599 |
T |
|
| Q |
212 |
tttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaaagtttcaagtgccactactccaaagctatataca |
311 |
Q |
| |
|
||| ||| ||||||| |||| ||| ||||||||||||| ||| || | || | |||||| | |||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
3954600 |
tttgatgtcttgagttgatgttaattgaagtgatgacaatatttcctcgggatatcttcccactaaaatttcaagtgccactactccaaaactatataca |
3954699 |
T |
|
| Q |
312 |
tcacacttttcactcacaaccatagtata |
340 |
Q |
| |
|
||||| |||||||| |||||||||||||| |
|
|
| T |
3954700 |
tcacatttttcacttacaaccatagtata |
3954728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 92 - 341
Target Start/End: Complemental strand, 1089490 - 1089241
Alignment:
| Q |
92 |
tggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcaagtaaaaccttcacattatttggaagtgggagacgc |
191 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||| || || |||||| ||||||||||| | | | | | | ||| |||||||||| ||||| |
|
|
| T |
1089490 |
tggtcgagaacgaggattgagatttaagcatgcaaatgctaccacggcaacatgaattatgtcatggatagctatttctttacttggaagtggaagacgt |
1089391 |
T |
|
| Q |
192 |
tggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaaagtttcaagtgcca |
291 |
Q |
| |
|
||||||||||||| ||||||||| || | ||| ||||||| | | ||||| ||||||| |||||| ||||||| ||||| | ||||||||||||||||| |
|
|
| T |
1089390 |
tggtctaatacttgacataatttgatactttgtgtcgatgttgattgaagggatgacaatatatcttcagggtgccttccaactaaagtttcaagtgcca |
1089291 |
T |
|
| Q |
292 |
ctactccaaagctatatacatcacacttttcactcacaaccatagtataa |
341 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
1089290 |
ctacaccaaaactatatacatcacacttttcactcacagccatagtataa |
1089241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 76 - 340
Target Start/End: Original strand, 1549892 - 1550156
Alignment:
| Q |
76 |
acacacacttcatttctggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcaagtaaaaccttcacattatt |
175 |
Q |
| |
|
||||||| |||||| ||||||||||||||| ||||||||||| ||||||||||| || || ||||| ||||||||||| ||| ||| | ||||||| |
|
|
| T |
1549892 |
acacacatttcattgttggtcgagagcgaggattgagatttaaacatgcaaatgctaccacggcaacttgaattatgtcacgtataactatttcattatt |
1549991 |
T |
|
| Q |
176 |
tggaagtgggagacgctggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctatt |
275 |
Q |
| |
|
||||||||| | ||| ||||||||||||| ||||||||| || | ||| ||||||| | |||||||||| || |||||| ||||||| |||| | | |
|
|
| T |
1549992 |
tggaagtggaatacgttggtctaatacttgacataatttgatactttgtgtcgatggagattgaagtgatgccaatatatcctcagggtgctttccaact |
1550091 |
T |
|
| Q |
276 |
aaagtttcaagtgccactactccaaagctatatacatcacacttttcactcacaaccatagtata |
340 |
Q |
| |
|
|| ||||||||||||||||| ||||| ||||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
1550092 |
aatgtttcaagtgccactacaccaaaactatatacatcacacttctcattcacagccatagtata |
1550156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 92 - 340
Target Start/End: Original strand, 1556728 - 1556976
Alignment:
| Q |
92 |
tggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcaagtaaaaccttcacattatttggaagtgggagacgc |
191 |
Q |
| |
|
||||||||| |||| |||| |||||||||||||||||| || || ||||| ||||||||||| ||| ||| | |||||||||||||||| |||||| |
|
|
| T |
1556728 |
tggtcgagaatgaggattgatatttaagcatgcaaatgcaaccacgacaacatgaattatgtcacgtataactatgtcattatttggaagtggaagacgc |
1556827 |
T |
|
| Q |
192 |
tggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaaagtttcaagtgcca |
291 |
Q |
| |
|
||||||||||||| ||||| ||| | | | | ||||||| | |||||||||||||||||| ||| ||||| || ||||| | ||||||||||||||| | |
|
|
| T |
1556828 |
tggtctaatacttgacatagtttgacacttcgtgtcgatgttgactgaagtgatgacagtaaatctccaggatgccttccaactaaagtttcaagtgcta |
1556927 |
T |
|
| Q |
292 |
ctactccaaagctatatacatcacacttttcactcacaaccatagtata |
340 |
Q |
| |
|
| || ||||| |||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
1556928 |
caacaccaaaactatatgcatcacacttttcattcacaaccatagtata |
1556976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 115 - 340
Target Start/End: Complemental strand, 1597220 - 1596995
Alignment:
| Q |
115 |
ttaagcatgcaaatgcgactacagcaacacgaattatgtcaagtaaaaccttcacattatttggaagtgggagacgctggtctaatacttcacataattt |
214 |
Q |
| |
|
|||||||||||||||| |||| |||||| ||||||||| | ||| ||| || |||||||||||||||| ||||| ||||||||||||| ||||| ||| |
|
|
| T |
1597220 |
ttaagcatgcaaatgcaactatggcaacatgaattatgtgacgtataactatctcattatttggaagtggaagacgttggtctaatacttgacatagttt |
1597121 |
T |
|
| Q |
215 |
catgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaaagtttcaagtgccactactccaaagctatatacatca |
314 |
Q |
| |
|
| | ||| ||||||| | | ||||||||||||| || ||| |||||||| ||||| | |||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
1597120 |
gagactttgtgtcgatgatgattgaagtgatgacaataaatccccagggtgccttccaactaaagtttcaagtgccaccacgccaaagctatatacatca |
1597021 |
T |
|
| Q |
315 |
cacttttcactcacaaccatagtata |
340 |
Q |
| |
|
||||||||| |||| |||||||||| |
|
|
| T |
1597020 |
cacttttcattcaccgccatagtata |
1596995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 92 - 341
Target Start/End: Complemental strand, 1605217 - 1604968
Alignment:
| Q |
92 |
tggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcaagtaaaaccttca-cattatttggaagtgggagacg |
190 |
Q |
| |
|
||||||||| ||||| |||| |||||||||||||||||| || || |||||| ||||||||||| ||| ||| | || | |||||||||||||| ||||| |
|
|
| T |
1605217 |
tggtcgagaacgaggattgatatttaagcatgcaaatgcaaccacggcaacatgaattatgtcacgtataac-tacatcgttatttggaagtggaagacg |
1605119 |
T |
|
| Q |
191 |
ctggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaaagtttcaagtgcc |
290 |
Q |
| |
|
|||||||||||||| ||||| ||| | | ||| ||||| | | ||||||||||||| |||||| ||||||| ||||| | ||||| |||||||||| |
|
|
| T |
1605118 |
ctggtctaatacttgacatagtttgacactttgtgtcgaatttgattgaagtgatgacaatatatcctcagggtgccttccaactaaagcttcaagtgcc |
1605019 |
T |
|
| Q |
291 |
actactccaaagctatatacatcacacttttcactcacaaccatagtataa |
341 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||| ||||| |||| |||||| |
|
|
| T |
1605018 |
actacaccaaaactatatacatcacacttttcattcacagccattgtataa |
1604968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 114 - 340
Target Start/End: Complemental strand, 3853449 - 3853223
Alignment:
| Q |
114 |
tttaagcatgcaaatgcgactacagcaacacgaattatgtcaagtaaaaccttcacattatttggaagtgggagacgctggtctaatacttcacataatt |
213 |
Q |
| |
|
||||| ||||||||||| || |||||||| |||| |||| |||| ||||| || ||||||||||| || ||||||| | ||||| |||||||| || || |
|
|
| T |
3853449 |
tttaaacatgcaaatgctacgacagcaacctgaataatgtgaagtgaaaccatctcattatttggacgttggagacgtttgtctagtacttcacgtagtt |
3853350 |
T |
|
| Q |
214 |
tcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaaagtttcaagtgccactactccaaagctatatacatc |
313 |
Q |
| |
|
| ||| ||||||| |||| ||| ||||||||||||| ||| || |||| |||||||| | |||| |||||||||||| ||| ||||| ||||||||||| |
|
|
| T |
3853349 |
tgatgtcttgagttgatgttaattgaagtgatgacaatatttcctcaggatgtcttcccaataaaatttcaagtgccattaccccaaaactatatacatc |
3853250 |
T |
|
| Q |
314 |
acacttttcactcacaaccatagtata |
340 |
Q |
| |
|
|||||||||||| |||||||||||||| |
|
|
| T |
3853249 |
acacttttcacttacaaccatagtata |
3853223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 92 - 341
Target Start/End: Complemental strand, 1106830 - 1106581
Alignment:
| Q |
92 |
tggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcaagtaaaaccttcacattatttggaagtgggagacgc |
191 |
Q |
| |
|
||||||||| ||||| |||| |||||||||||||||||| || || |||||| ||||||||||| ||| ||| | |||||||||||||| |||||| |
|
|
| T |
1106830 |
tggtcgagaacgaggattgatatttaagcatgcaaatgcaaccacggcaacatgaattatgtcacgtataactacgtcgttatttggaagtggaagacgc |
1106731 |
T |
|
| Q |
192 |
tggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaaagtttcaagtgcca |
291 |
Q |
| |
|
||||||||||||| ||||| ||| | | ||| | ||| | | ||||||||||||| |||||| ||||||| ||||| | ||||| ||||||||||| |
|
|
| T |
1106730 |
tggtctaatacttgacatagtttgacactttgtggcgaatttgattgaagtgatgacaatatatcctcagggtgccttccaactaaagcttcaagtgcca |
1106631 |
T |
|
| Q |
292 |
ctactccaaagctatatacatcacacttttcactcacaaccatagtataa |
341 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||| ||||| |||| |||||| |
|
|
| T |
1106630 |
ctacaccaaaactatatacatcacacttttcattcacagccattgtataa |
1106581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 92 - 340
Target Start/End: Original strand, 1540683 - 1540931
Alignment:
| Q |
92 |
tggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcaagtaaaaccttcacattatttggaagtgggagacgc |
191 |
Q |
| |
|
||||||||| ||||| ||| |||||||||||||||||| || | | |||| ||||||||||| ||| ||| | |||||||||||||||| ||||| |
|
|
| T |
1540683 |
tggtcgagaacgaggattgccatttaagcatgcaaatgctaccagggaaacatgaattatgtcacgtataactatgtcattatttggaagtggaagacgt |
1540782 |
T |
|
| Q |
192 |
tggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaaagtttcaagtgcca |
291 |
Q |
| |
|
||||||||||||| || || ||| | | | ||||||| | | ||||||||||||| || ||| |||||||| ||||| | |||||||||||||| || |
|
|
| T |
1540783 |
tggtctaatacttgacgtagtttgacacttcttgtcgatgttgattgaagtgatgacaataaatccccagggtgccttccaactaaagtttcaagtgtca |
1540882 |
T |
|
| Q |
292 |
ctactccaaagctatatacatcacacttttcactcacaaccatagtata |
340 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
1540883 |
ctacaccaaaactatatacatcacacttttcattcacagccatagtata |
1540931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 78 - 308
Target Start/End: Original strand, 1563970 - 1564200
Alignment:
| Q |
78 |
acacacttcatttctggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcaagtaaaaccttcacattatttg |
177 |
Q |
| |
|
||||| |||||| ||||||||| ||||| ||||||||||| | ||||||||| || || |||||| ||||||||||| ||| ||| | | ||||||| |
|
|
| T |
1563970 |
acacatttcattgttggtcgagaacgaggattgagatttaaacttgcaaatgctaccacggcaacatgaattatgtcacgtataactatttcgttatttg |
1564069 |
T |
|
| Q |
178 |
gaagtgggagacgctggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaa |
277 |
Q |
| |
|
||||| | ||||| ||||||||||||| ||||||||| || | ||| ||||||| | | ||||||||||||| |||||| ||||| | ||||| | ||| |
|
|
| T |
1564070 |
gaagtcgaagacgttggtctaatacttgacataatttgatactttgtgtcgatgttgattgaagtgatgacaatatatctccaggtttccttccaactaa |
1564169 |
T |
|
| Q |
278 |
agtttcaagtgccactactccaaagctatat |
308 |
Q |
| |
|
||||||||||| |||||| ||||| |||||| |
|
|
| T |
1564170 |
agtttcaagtgtcactacaccaaaactatat |
1564200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 92 - 256
Target Start/End: Complemental strand, 2335308 - 2335141
Alignment:
| Q |
92 |
tggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcaagtaaaaccttcacattatttggaagtgggagacgc |
191 |
Q |
| |
|
||||| ||||| ||| ||||||||||||||||||||||| || | |||||||||||||||||||||||||| ||||||||||||||| | || || | |
|
|
| T |
2335308 |
tggtcaagagcaaggattgagatttaagcatgcaaatgctacaatgacaacacgaattatgtcaagtaaaaccatcacattatttggaaataggggatgt |
2335209 |
T |
|
| Q |
192 |
tggtctaatacttcaca---taatttcatgccttgagtcgatgctaactgaagtgatgacagtatatc |
256 |
Q |
| |
|
|| |||||||||||||| |||||||||||| |||| ||||| || ||||||||||||| |||||| |
|
|
| T |
2335208 |
tgttctaatacttcacataataatttcatgccgagagttgatgcaaattgaagtgatgacaatatatc |
2335141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 76 - 216
Target Start/End: Complemental strand, 2326455 - 2326313
Alignment:
| Q |
76 |
acacacacttcatttctggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattat--gtcaagtaaaaccttcacatta |
173 |
Q |
| |
|
||||||| |||||| |||||||||| ||| |||||||||||| |||||||||| |||| |||||||||||||| ||||||||||||| ||| |||| |
|
|
| T |
2326455 |
acacacatttcattgttggtcgagagaaaggattgagatttaagtatgcaaatgctactaaggcaacacgaattatatgtcaagtaaaaccatcatatta |
2326356 |
T |
|
| Q |
174 |
tttggaagtgggagacgctggtctaatacttcacataatttca |
216 |
Q |
| |
|
|| ||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
2326355 |
ttcagaagtgggagacgttggtctaatacttcacataacttca |
2326313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0491 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0491
Description:
Target: scaffold0491; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 76 - 340
Target Start/End: Original strand, 5319 - 5583
Alignment:
| Q |
76 |
acacacacttcatttctggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcaagtaaaaccttcacattatt |
175 |
Q |
| |
|
||||||| |||||| ||||||||| ||||| |||| ||||||||||||||| || || || |||| | ||||||||| | ||| |||| | ||||||| |
|
|
| T |
5319 |
acacacatttcattgttggtcgagaacgaggattgacatttaagcatgcaaaggcaacaacggcaaaatgaattatgttacgtataaccatttcattatt |
5418 |
T |
|
| Q |
176 |
tggaagtgggagacgctggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctatt |
275 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||| ||| | | ||| ||||||| | | ||||||||||||| || ||| |||||||| ||||| | |
|
|
| T |
5419 |
tggaagtggaagacgctggtctaatacttgacatagtttgacactttgtgtcgatgttgattgaagtgatgacaataaatccccagggtgccttccagct |
5518 |
T |
|
| Q |
276 |
aaagtttcaagtgccactactccaaagctatatacatcacacttttcactcacaaccatagtata |
340 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
5519 |
aaagtttcaagtgccactacaccaaaactatatacatcacacttttcattcacagccatagtata |
5583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 105; Significance: 2e-52; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 76 - 340
Target Start/End: Original strand, 18738547 - 18738811
Alignment:
| Q |
76 |
acacacacttcatttctggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcaagtaaaaccttcacattatt |
175 |
Q |
| |
|
||||||| |||||| ||||||||| ||||| |||| |||||||||||||||||| || || ||| || ||||||||||| ||| ||| | ||||||| |
|
|
| T |
18738547 |
acacacatttcattgttggtcgagaacgaggattgacatttaagcatgcaaatgctaccacggcagcatgaattatgtcacgtataactatgtcattatt |
18738646 |
T |
|
| Q |
176 |
tggaagtgggagacgctggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctatt |
275 |
Q |
| |
|
||||||||| ||||| ||||||||||||| ||||| ||| | | ||| ||||||| | | ||||||||||||| || ||| |||||||| ||||| | | |
|
|
| T |
18738647 |
tggaagtggaagacggtggtctaatacttgacatagtttgagactttgtgtcgatgttgattgaagtgatgacaataaatccccagggtgccttccaact |
18738746 |
T |
|
| Q |
276 |
aaagtttcaagtgccactactccaaagctatatacatcacacttttcactcacaaccatagtata |
340 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||||| | ||| |||||||||| |
|
|
| T |
18738747 |
aaagtttcaagtgccactacaccaaaactatatacatcacacttttcattaacagccatagtata |
18738811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 76 - 340
Target Start/End: Original strand, 18743511 - 18743775
Alignment:
| Q |
76 |
acacacacttcatttctggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcaagtaaaaccttcacattatt |
175 |
Q |
| |
|
||||||| |||||| ||||||||| ||||| |||| |||||||||||||||||| || || ||| || ||||||||||| ||| ||| | ||||||| |
|
|
| T |
18743511 |
acacacatttcattgttggtcgagaacgaggattgacatttaagcatgcaaatgctaccacggcagcatgaattatgtcacgtataactatgtcattatt |
18743610 |
T |
|
| Q |
176 |
tggaagtgggagacgctggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctatt |
275 |
Q |
| |
|
||||||||| ||||| ||||||||||||| ||||| ||| | | ||| ||||||| | | ||||||||||||| || ||| |||||||| ||||| | | |
|
|
| T |
18743611 |
tggaagtggaagacggtggtctaatacttgacatagtttgagactttgtgtcgatgttgattgaagtgatgacaataaatccccagggtgccttccaact |
18743710 |
T |
|
| Q |
276 |
aaagtttcaagtgccactactccaaagctatatacatcacacttttcactcacaaccatagtata |
340 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||||| | ||| |||||||||| |
|
|
| T |
18743711 |
aaagtttcaagtgccactacaccaaaactatatacatcacacttttcattaacagccatagtata |
18743775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 76 - 340
Target Start/End: Original strand, 18748478 - 18748742
Alignment:
| Q |
76 |
acacacacttcatttctggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcaagtaaaaccttcacattatt |
175 |
Q |
| |
|
||||||| |||||| ||||||||| ||||| |||| ||||||||||||||| || || || |||| | ||||||||| | ||| |||| | ||||||| |
|
|
| T |
18748478 |
acacacatttcattgttggtcgagaacgaggattgacatttaagcatgcaaaggcaacaacggcaaaatgaattatgttacgtataaccatttcattatt |
18748577 |
T |
|
| Q |
176 |
tggaagtgggagacgctggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctatt |
275 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||| ||| | | ||| ||||||| | | ||||||||||||| || ||| |||||||| ||||| | |
|
|
| T |
18748578 |
tggaagtggaagacgctggtctaatacttgacatagtttgacactttgtgtcgatgttgattgaagtgatgacaataaatccccagggtgccttccagct |
18748677 |
T |
|
| Q |
276 |
aaagtttcaagtgccactactccaaagctatatacatcacacttttcactcacaaccatagtata |
340 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
18748678 |
aaagtttcaagtgccactacaccaaaactatatacatcacacttttcattcacagccatagtata |
18748742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 76 - 340
Target Start/End: Original strand, 18722826 - 18723090
Alignment:
| Q |
76 |
acacacacttcatttctggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcaagtaaaaccttcacattatt |
175 |
Q |
| |
|
||||||| |||||| ||||||||| ||||| |||| ||||||||||||||| || || || |||| | ||||||||| | ||| |||| | ||||||| |
|
|
| T |
18722826 |
acacacatttcattgttggtcgagaacgaggattgacatttaagcatgcaaaggcaacaacggcaaaatgaattatgttacgtataaccatttcattatt |
18722925 |
T |
|
| Q |
176 |
tggaagtgggagacgctggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctatt |
275 |
Q |
| |
|
||||||||| ||||||||||||||||||| | ||| ||| | | ||| || |||| | | ||||||||||||| || ||| |||||||| ||||| | |
|
|
| T |
18722926 |
tggaagtggaagacgctggtctaatacttgatatagtttgacactttgtgttgatgttgattgaagtgatgacaataaatccccagggtgccttccagct |
18723025 |
T |
|
| Q |
276 |
aaagtttcaagtgccactactccaaagctatatacatcacacttttcactcacaaccatagtata |
340 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
18723026 |
aaagtttcaagtgccactacaccaaaactatatacatcacacttttcattcacagccatagtata |
18723090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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