View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0584_low_2 (Length: 713)

Name: NF0584_low_2
Description: NF0584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0584_low_2
NF0584_low_2
[»] chr8 (16 HSPs)
chr8 (133-492)||(36902672-36903049)
chr8 (559-701)||(36903105-36903247)
chr8 (560-684)||(36892302-36892426)
chr8 (96-139)||(2041788-2041831)
chr8 (96-132)||(15730467-15730503)
chr8 (96-132)||(26782012-26782048)
chr8 (96-130)||(24112476-24112510)
chr8 (96-137)||(18595411-18595452)
chr8 (96-132)||(4716645-4716681)
chr8 (91-139)||(8022382-8022430)
chr8 (96-132)||(14423600-14423636)
chr8 (96-132)||(34998172-34998208)
chr8 (96-139)||(6143763-6143806)
chr8 (96-130)||(34678955-34678989)
chr8 (96-138)||(40116668-40116710)
chr8 (91-132)||(13111073-13111114)
[»] chr4 (25 HSPs)
chr4 (587-701)||(17480422-17480536)
chr4 (96-138)||(50354479-50354521)
chr4 (96-137)||(14988625-14988666)
chr4 (96-133)||(44784208-44784245)
chr4 (96-132)||(10687632-10687668)
chr4 (96-132)||(10901272-10901308)
chr4 (96-136)||(45423886-45423926)
chr4 (96-131)||(52140135-52140170)
chr4 (96-130)||(15670045-15670079)
chr4 (96-134)||(16701646-16701684)
chr4 (96-138)||(30172377-30172419)
chr4 (96-130)||(35490259-35490293)
chr4 (96-137)||(38056094-38056135)
chr4 (96-129)||(38070569-38070602)
chr4 (96-133)||(50053589-50053626)
chr4 (96-130)||(2480812-2480846)
chr4 (96-130)||(15240320-15240354)
chr4 (96-130)||(27531958-27531992)
chr4 (96-130)||(28031933-28031967)
chr4 (96-130)||(34618025-34618059)
chr4 (96-126)||(48910618-48910648)
chr4 (96-134)||(53408955-53408993)
chr4 (96-129)||(6687851-6687884)
chr4 (96-129)||(19912927-19912960)
chr4 (96-137)||(20877804-20877845)
[»] chr3 (17 HSPs)
chr3 (96-137)||(20841666-20841707)
chr3 (96-134)||(13697576-13697614)
chr3 (96-130)||(16355385-16355419)
chr3 (96-134)||(22175465-22175503)
chr3 (96-132)||(8043541-8043577)
chr3 (96-136)||(12116963-12117003)
chr3 (96-131)||(25493722-25493757)
chr3 (96-134)||(15517917-15517955)
chr3 (96-130)||(15521507-15521541)
chr3 (96-134)||(20699995-20700033)
chr3 (96-130)||(34701090-34701124)
chr3 (96-130)||(37697428-37697462)
chr3 (96-130)||(38934805-38934839)
chr3 (96-130)||(42307229-42307263)
chr3 (96-126)||(44689689-44689719)
chr3 (96-130)||(50529793-50529827)
chr3 (99-132)||(32245052-32245085)
[»] chr6 (10 HSPs)
chr6 (96-139)||(18614402-18614445)
chr6 (96-131)||(20727466-20727501)
chr6 (96-131)||(30692702-30692737)
chr6 (96-129)||(34887146-34887179)
chr6 (96-132)||(3346834-3346870)
chr6 (96-135)||(16306464-16306503)
chr6 (96-130)||(53765-53799)
chr6 (98-132)||(9460472-9460506)
chr6 (96-129)||(6085939-6085972)
chr6 (96-129)||(33465219-33465252)
[»] chr7 (17 HSPs)
chr7 (96-133)||(38867484-38867521)
chr7 (96-132)||(36890260-36890296)
chr7 (96-132)||(42205223-42205259)
chr7 (96-130)||(43157404-43157438)
chr7 (96-132)||(5281567-5281603)
chr7 (96-131)||(12097083-12097118)
chr7 (96-139)||(43407813-43407856)
chr7 (98-132)||(8631602-8631636)
chr7 (96-130)||(18120692-18120726)
chr7 (96-130)||(25749157-25749191)
chr7 (96-129)||(4476316-4476349)
chr7 (96-125)||(16893830-16893859)
chr7 (96-129)||(17754462-17754495)
chr7 (96-129)||(30180065-30180098)
chr7 (96-125)||(32042217-32042246)
chr7 (96-129)||(33358407-33358440)
chr7 (96-133)||(43021055-43021092)
[»] chr1 (24 HSPs)
chr1 (96-137)||(15718544-15718585)
chr1 (96-132)||(1171378-1171414)
chr1 (91-131)||(1940244-1940284)
chr1 (96-132)||(38829985-38830021)
chr1 (96-132)||(46410121-46410157)
chr1 (96-130)||(1168709-1168743)
chr1 (96-130)||(42369640-42369674)
chr1 (96-137)||(20097548-20097589)
chr1 (96-132)||(7146523-7146559)
chr1 (96-136)||(23323494-23323534)
chr1 (96-128)||(26579508-26579540)
chr1 (96-132)||(38172626-38172662)
chr1 (96-127)||(969851-969882)
chr1 (96-131)||(17586685-17586720)
chr1 (96-127)||(32672515-32672546)
chr1 (99-130)||(40093364-40093395)
chr1 (96-135)||(52752508-52752547)
chr1 (96-130)||(2478479-2478513)
chr1 (96-130)||(17592547-17592581)
chr1 (96-130)||(39259697-39259731)
chr1 (96-129)||(8078949-8078982)
chr1 (96-129)||(51358672-51358705)
chr1 (96-125)||(52088475-52088504)
chr1 (96-129)||(52697518-52697551)
[»] chr5 (10 HSPs)
chr5 (96-132)||(9007289-9007325)
chr5 (96-132)||(26602283-26602319)
chr5 (96-134)||(8373594-8373632)
chr5 (96-132)||(16070289-16070325)
chr5 (96-131)||(1165050-1165085)
chr5 (98-129)||(27678493-27678524)
chr5 (96-130)||(19360835-19360869)
chr5 (96-134)||(27421537-27421575)
chr5 (96-130)||(35419917-35419951)
chr5 (96-129)||(41817997-41818030)
[»] chr2 (10 HSPs)
chr2 (96-136)||(33905277-33905317)
chr2 (96-135)||(851771-851810)
chr2 (96-131)||(3872474-3872509)
chr2 (96-133)||(1110158-1110195)
chr2 (96-133)||(26322512-26322549)
chr2 (96-132)||(19900655-19900691)
chr2 (99-130)||(1481268-1481299)
chr2 (96-130)||(4231653-4231687)
chr2 (96-126)||(5734260-5734290)
chr2 (96-129)||(18806113-18806146)
[»] scaffold0920 (1 HSPs)
scaffold0920 (96-134)||(189-227)


Alignment Details
Target: chr8 (Bit Score: 252; Significance: 1e-140; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 133 - 492
Target Start/End: Original strand, 36902672 - 36903049
Alignment:
Q  133 gtctattcaccagtgattttgatttttgtatagatttgatccgtacagacgcgcactgctcgtgtatcactctactaaacacactaaaaaactttgggcg 232  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||    
T  36902672 gtctattcaccagtaattttgatttttgtatagatttgatccgtacagacgcgcactgctcgtgtatcactctactaa--atactaaaaaactttgggcg 36902769  T
Q  233 gg------------caattttcaatt--------------ttgaatcacacacacggtcactttcactttaacaatctctgcgtctgagtagcggttgaa 306  Q
    ||            ||||||||||||              |||||||||||||||||      |||||||||||||||||||||||||||||||||||||    
T  36902770 ggactcaaaattttcaattttcaattttcaattttcaattttgaatcacacacacgg------tcactttaacaatctctgcgtctgagtagcggttgaa 36902863  T
Q  307 gaagaacatggcgatgtcgaactacgaatacccaaggcttcgccggccagaaatagttcaactcctaaacaactttcaaattgctaccgttacagacaac 406  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  36902864 gaagaacatggcgatgtcgaactacgaatacccaaggcttcgccggccagaaatagttcaactcctaaacaactttcaaattgctaccgttacagagaac 36902963  T
Q  407 gacatctccaaccccagaaccggcgtcgttttggatctctacactcgcatcctcaactacctcgattttctccacgagtaactatc 492  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36902964 gacatctccaaccccagaaccggcgtcgttttggatctctacactcgcatcctcaactacctcgattttctccacgagtaactatc 36903049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 559 - 701
Target Start/End: Original strand, 36903105 - 36903247
Alignment:
Q  559 aatttctcacagcgaagacaacggacagcttgatttcgatgcactagagcatctcgagaatcccgatcttcacgttggatctattcatgctatcaagctt 658  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  36903105 aatttctcacagcgaagacaacggacagcttgatttcgatgcactagagcatctcgagaatcccgaccttcacgttggatctattcatgctatcaagctt 36903204  T
Q  659 tataacaagatcaaggaaatgcttaacttacttgaatgtccta 701  Q
    || ||||||||||||||||||||||||||||||||||||||||    
T  36903205 tacaacaagatcaaggaaatgcttaacttacttgaatgtccta 36903247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 560 - 684
Target Start/End: Complemental strand, 36892426 - 36892302
Alignment:
Q  560 atttctcacagcgaagacaacggacagcttgatttcgatgcactagagcatctcgagaatcccgatcttcacgttggatctattcatgctatcaagcttt 659  Q
    ||||||||||| ||| || ||| ||||||||| ||| |||| ||||||||||| |||||||||||||||||||||||| |  ||| || ||| ||||| |    
T  36892426 atttctcacagggaatacgacgaacagcttgagttcaatgccctagagcatcttgagaatcccgatcttcacgttggagcggttcctgttattaagctgt 36892327  T
Q  660 ataacaagatcaaggaaatgcttaa 684  Q
    | ||||||||||  |||||||||||    
T  36892326 acaacaagatcatagaaatgcttaa 36892302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 2041831 - 2041788
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagtctatt 139  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  2041831 agcatctatataagttgtttatccaaacggggcctaaatctatt 2041788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 15730467 - 15730503
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaa 132  Q
    |||||||||||||||||||||||||||||||||||||    
T  15730467 agcatctatataagttgtttatccaaacggggcctaa 15730503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 26782048 - 26782012
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaa 132  Q
    |||||||||||||||||||||||||||||||||||||    
T  26782048 agcatctatataagttgtttatccaaacggggcctaa 26782012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 130
Target Start/End: Complemental strand, 24112510 - 24112476
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||||||||||||||||||||||||    
T  24112510 agcatctatataagttgtttatccaaacggggcct 24112476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 18595411 - 18595452
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagtcta 137  Q
    |||||||||||||| ||||||||||||||||||| |||||||    
T  18595411 agcatctatataagctgtttatccaaacggggcccaagtcta 18595452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 4716645 - 4716681
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaa 132  Q
    |||||||||||||| ||||||||||||||||||||||    
T  4716645 agcatctatataagctgtttatccaaacggggcctaa 4716681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 8022382 - 8022430
Alignment:
Q  91 tcatcagcatctatataagttgtttatccaaacggggcctaagtctatt 139  Q
    |||| |||||||||||||| ||||||||||||| ||||||| |||||||    
T  8022382 tcataagcatctatataagctgtttatccaaacagggcctatgtctatt 8022430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 14423600 - 14423636
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaa 132  Q
    |||||||||||||| ||||||||||||||||||||||    
T  14423600 agcatctatataagctgtttatccaaacggggcctaa 14423636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 34998208 - 34998172
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaa 132  Q
    ||||||||||||||||||||||||||||||| |||||    
T  34998208 agcatctatataagttgtttatccaaacgggacctaa 34998172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 6143806 - 6143763
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagtctatt 139  Q
    |||||||||||||| ||||||||||||| |||||||||| ||||    
T  6143806 agcatctatataagctgtttatccaaacagggcctaagtatatt 6143763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 130
Target Start/End: Complemental strand, 34678989 - 34678955
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||| ||||||||||||||||||||    
T  34678989 agcatctatataagctgtttatccaaacggggcct 34678955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 40116710 - 40116668
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagtctat 138  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||    
T  40116710 agcatctatataagttgttaatccaaacgaggcctaaatctat 40116668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 132
Target Start/End: Original strand, 13111073 - 13111114
Alignment:
Q  91 tcatcagcatctatataagttgtttatccaaacggggcctaa 132  Q
    |||| ||||||||||||||||||||||||||||  |||||||    
T  13111073 tcataagcatctatataagttgtttatccaaacatggcctaa 13111114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 7e-20; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 587 - 701
Target Start/End: Complemental strand, 17480536 - 17480422
Alignment:
Q  587 cttgatttcgatgcactagagcatctcgagaatcccgatcttcacgttggatctattcatgctatcaagctttataacaagatcaaggaaatgcttaact 686  Q
    ||||||||| ||||| | ||||||||||| ||||| |||||||||||||||||  ||| || ||||||| | ||||| ||||||||||||||||||||      
T  17480536 cttgatttcaatgcagttgagcatctcgaaaatcctgatcttcacgttggatcggttcctgttatcaaggtgtataataagatcaaggaaatgcttaata 17480437  T
Q  687 tacttgaatgtccta 701  Q
      |||||||||||||    
T  17480436 ctcttgaatgtccta 17480422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 50354479 - 50354521
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagtctat 138  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  50354479 agcatctatataagttgtttatccaaacgaggcctaagtctat 50354521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 14988625 - 14988666
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagtcta 137  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  14988625 agcatctatataagctgtttatccaaacggggcctaagtcta 14988666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 44784245 - 44784208
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaag 133  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44784245 agcatctatataagttgtttatccaaacggggcctaag 44784208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 10687668 - 10687632
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaa 132  Q
    |||||||||||||||||||||||||||||||||||||    
T  10687668 agcatctatataagttgtttatccaaacggggcctaa 10687632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 10901308 - 10901272
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaa 132  Q
    |||||||||||||||||||||||||||||||||||||    
T  10901308 agcatctatataagttgtttatccaaacggggcctaa 10901272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 45423926 - 45423886
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagtct 136  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  45423926 agcatctatataagctgtttatccaaacggggcctaagtct 45423886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 96 - 131
Target Start/End: Original strand, 52140135 - 52140170
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggccta 131  Q
    ||||||||||||||||||||||||||||||||||||    
T  52140135 agcatctatataagttgtttatccaaacggggccta 52140170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 130
Target Start/End: Original strand, 15670045 - 15670079
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||||||||||||||||||||||||    
T  15670045 agcatctatataagttgtttatccaaacggggcct 15670079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 16701646 - 16701684
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagt 134  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  16701646 agcatctatataagttgtttatccaaacggagcctaagt 16701684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 30172377 - 30172419
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagtctat 138  Q
    ||||||||||||||||||||||||||| ||||||||| |||||    
T  30172377 agcatctatataagttgtttatccaaatggggcctaattctat 30172419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 130
Target Start/End: Complemental strand, 35490293 - 35490259
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||||||||||||||||||||||||    
T  35490293 agcatctatataagttgtttatccaaacggggcct 35490259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 38056094 - 38056135
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagtcta 137  Q
    |||||||||||||| ||||||||||||||||||| |||||||    
T  38056094 agcatctatataagctgtttatccaaacggggccaaagtcta 38056135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 38070602 - 38070569
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcc 129  Q
    ||||||||||||||||||||||||||||||||||    
T  38070602 agcatctatataagttgtttatccaaacggggcc 38070569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 50053626 - 50053589
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaag 133  Q
    |||||||||||||| |||||||||||||||||||||||    
T  50053626 agcatctatataagctgtttatccaaacggggcctaag 50053589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 130
Target Start/End: Complemental strand, 2480846 - 2480812
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||| ||||||||||||||||||||    
T  2480846 agcatctatataagctgtttatccaaacggggcct 2480812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 130
Target Start/End: Complemental strand, 15240354 - 15240320
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||||||||||||| ||||||||||    
T  15240354 agcatctatataagttgtttatccgaacggggcct 15240320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 130
Target Start/End: Complemental strand, 27531992 - 27531958
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||||||||||||||||||| ||||    
T  27531992 agcatctatataagttgtttatccaaacggagcct 27531958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 130
Target Start/End: Complemental strand, 28031967 - 28031933
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||| ||||||||||||||||||||    
T  28031967 agcatctatataagctgtttatccaaacggggcct 28031933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 130
Target Start/End: Original strand, 34618025 - 34618059
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    ||||| |||||||||||||||||||||||||||||    
T  34618025 agcatttatataagttgtttatccaaacggggcct 34618059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 126
Target Start/End: Original strand, 48910618 - 48910648
Alignment:
Q  96 agcatctatataagttgtttatccaaacggg 126  Q
    |||||||||||||||||||||||||||||||    
T  48910618 agcatctatataagttgtttatccaaacggg 48910648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 53408955 - 53408993
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagt 134  Q
    |||||||||||||| ||||||||||||| ||||||||||    
T  53408955 agcatctatataagctgtttatccaaacagggcctaagt 53408993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 6687884 - 6687851
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcc 129  Q
    |||||||||||||| |||||||||||||||||||    
T  6687884 agcatctatataagctgtttatccaaacggggcc 6687851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 19912960 - 19912927
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcc 129  Q
    ||||||||||||||||||||||||||||| ||||    
T  19912960 agcatctatataagttgtttatccaaacgaggcc 19912927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 20877804 - 20877845
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagtcta 137  Q
    ||||||||||||||||||||||||||||| || |||| ||||    
T  20877804 agcatctatataagttgtttatccaaacgagggctaattcta 20877845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 20841707 - 20841666
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagtcta 137  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  20841707 agcatctatataagttgtttatccaaacggggcctaagtcta 20841666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 13697576 - 13697614
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagt 134  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  13697576 agcatctatataagctgtttatccaaacggggcctaagt 13697614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 130
Target Start/End: Original strand, 16355385 - 16355419
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||||||||||||||||||||||||    
T  16355385 agcatctatataagttgtttatccaaacggggcct 16355419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 22175465 - 22175503
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagt 134  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  22175465 agcatctatataagctgtttatccaaacggggcctaagt 22175503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 8043541 - 8043577
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaa 132  Q
    |||||||||||||||||||||||||||| ||||||||    
T  8043541 agcatctatataagttgtttatccaaacagggcctaa 8043577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 12117003 - 12116963
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagtct 136  Q
    |||||||||||||| ||||||||||||| ||||||||||||    
T  12117003 agcatctatataagctgtttatccaaacagggcctaagtct 12116963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 131
Target Start/End: Complemental strand, 25493757 - 25493722
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggccta 131  Q
    ||||||||||||||||||||||||||||| ||||||    
T  25493757 agcatctatataagttgtttatccaaacgaggccta 25493722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 15517955 - 15517917
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagt 134  Q
    |||| ||||||||| ||||||||||||||||||||||||    
T  15517955 agcacctatataagctgtttatccaaacggggcctaagt 15517917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 130
Target Start/End: Original strand, 15521507 - 15521541
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||| ||||||||||||||||||||    
T  15521507 agcatctatataagctgtttatccaaacggggcct 15521541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 20699995 - 20700033
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagt 134  Q
    |||||||||||||| ||||||||||||| ||||||||||    
T  20699995 agcatctatataagctgtttatccaaacagggcctaagt 20700033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 130
Target Start/End: Original strand, 34701090 - 34701124
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    ||||||||||||||||||||||||||||| |||||    
T  34701090 agcatctatataagttgtttatccaaacgaggcct 34701124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 130
Target Start/End: Complemental strand, 37697462 - 37697428
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||| ||||||||||||||||||||    
T  37697462 agcatctatataagctgtttatccaaacggggcct 37697428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 130
Target Start/End: Original strand, 38934805 - 38934839
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||||||||||||||||| ||||||    
T  38934805 agcatctatataagttgtttatccaaacagggcct 38934839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 130
Target Start/End: Complemental strand, 42307263 - 42307229
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||| ||||||||||||||||||||    
T  42307263 agcatctatataagatgtttatccaaacggggcct 42307229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 126
Target Start/End: Original strand, 44689689 - 44689719
Alignment:
Q  96 agcatctatataagttgtttatccaaacggg 126  Q
    |||||||||||||||||||||||||||||||    
T  44689689 agcatctatataagttgtttatccaaacggg 44689719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 130
Target Start/End: Original strand, 50529793 - 50529827
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||| ||||||||||||||||||||    
T  50529793 agcatctatataagctgtttatccaaacggggcct 50529827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 32245052 - 32245085
Alignment:
Q  99 atctatataagttgtttatccaaacggggcctaa 132  Q
    ||||||||||| ||||||||||||||||||||||    
T  32245052 atctatataagctgtttatccaaacggggcctaa 32245085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 139
Target Start/End: Original strand, 18614402 - 18614445
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagtctatt 139  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  18614402 agcatctatataagttgtttatccaaacggggcctaattctatt 18614445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 96 - 131
Target Start/End: Original strand, 20727466 - 20727501
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggccta 131  Q
    ||||||||||||||||||||||||||||||||||||    
T  20727466 agcatctatataagttgtttatccaaacggggccta 20727501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 96 - 131
Target Start/End: Original strand, 30692702 - 30692737
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggccta 131  Q
    ||||||||||||||||||||||||||||||||||||    
T  30692702 agcatctatataagttgtttatccaaacggggccta 30692737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 34887146 - 34887179
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcc 129  Q
    ||||||||||||||||||||||||||||||||||    
T  34887146 agcatctatataagttgtttatccaaacggggcc 34887179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 3346870 - 3346834
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaa 132  Q
    ||||||||||||||||||||||||||||| |||||||    
T  3346870 agcatctatataagttgtttatccaaacgtggcctaa 3346834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 135
Target Start/End: Complemental strand, 16306503 - 16306464
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagtc 135  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  16306503 agcatctatataagctgtttatccaaacggggccttagtc 16306464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 130
Target Start/End: Original strand, 53765 - 53799
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||| ||||||||||||||||||||    
T  53765 agcatctatataagctgtttatccaaacggggcct 53799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 98 - 132
Target Start/End: Original strand, 9460472 - 9460506
Alignment:
Q  98 catctatataagttgtttatccaaacggggcctaa 132  Q
    |||||||||||| ||||||||||||||||||||||    
T  9460472 catctatataagctgtttatccaaacggggcctaa 9460506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 6085972 - 6085939
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcc 129  Q
    |||||||||||||| |||||||||||||||||||    
T  6085972 agcatctatataagctgtttatccaaacggggcc 6085939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 33465219 - 33465252
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcc 129  Q
    |||||||||||||||||||||| |||||||||||    
T  33465219 agcatctatataagttgtttattcaaacggggcc 33465252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000004; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 38867484 - 38867521
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaag 133  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38867484 agcatctatataagttgtttatccaaacggggcctaag 38867521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 36890296 - 36890260
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaa 132  Q
    |||||||||||||||||||||||||||||||||||||    
T  36890296 agcatctatataagttgtttatccaaacggggcctaa 36890260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 42205223 - 42205259
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaa 132  Q
    |||||||||||||||||||||||||||||||||||||    
T  42205223 agcatctatataagttgtttatccaaacggggcctaa 42205259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 130
Target Start/End: Original strand, 43157404 - 43157438
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||||||||||||||||||||||||    
T  43157404 agcatctatataagttgtttatccaaacggggcct 43157438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 5281567 - 5281603
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaa 132  Q
    |||||||||||||| ||||||||||||||||||||||    
T  5281567 agcatctatataagctgtttatccaaacggggcctaa 5281603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 131
Target Start/End: Complemental strand, 12097118 - 12097083
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggccta 131  Q
    |||||||||||||| |||||||||||||||||||||    
T  12097118 agcatctatataagctgtttatccaaacggggccta 12097083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 139
Target Start/End: Original strand, 43407813 - 43407856
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagtctatt 139  Q
    |||||| ||||||| |||||||||||||||||||||||| ||||    
T  43407813 agcatcaatataagctgtttatccaaacggggcctaagtatatt 43407856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 98 - 132
Target Start/End: Original strand, 8631602 - 8631636
Alignment:
Q  98 catctatataagttgtttatccaaacggggcctaa 132  Q
    |||||||||||||||||||||||| ||||||||||    
T  8631602 catctatataagttgtttatccaagcggggcctaa 8631636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 130
Target Start/End: Complemental strand, 18120726 - 18120692
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||| ||||||||||||||||||||    
T  18120726 agcatctatataagctgtttatccaaacggggcct 18120692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 130
Target Start/End: Original strand, 25749157 - 25749191
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||||||||||||||| ||||||||    
T  25749157 agcatctatataagttgtttatccaaccggggcct 25749191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 4476349 - 4476316
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcc 129  Q
    |||||||||||||| |||||||||||||||||||    
T  4476349 agcatctatataagctgtttatccaaacggggcc 4476316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 125
Target Start/End: Complemental strand, 16893859 - 16893830
Alignment:
Q  96 agcatctatataagttgtttatccaaacgg 125  Q
    ||||||||||||||||||||||||||||||    
T  16893859 agcatctatataagttgtttatccaaacgg 16893830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 17754462 - 17754495
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcc 129  Q
    |||||||||||||| |||||||||||||||||||    
T  17754462 agcatctatataagctgtttatccaaacggggcc 17754495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 30180098 - 30180065
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcc 129  Q
    ||||| ||||||||||||||||||||||||||||    
T  30180098 agcatgtatataagttgtttatccaaacggggcc 30180065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 125
Target Start/End: Original strand, 32042217 - 32042246
Alignment:
Q  96 agcatctatataagttgtttatccaaacgg 125  Q
    ||||||||||||||||||||||||||||||    
T  32042217 agcatctatataagttgtttatccaaacgg 32042246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 33358440 - 33358407
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcc 129  Q
    |||||||||||||| |||||||||||||||||||    
T  33358440 agcatctatataagatgtttatccaaacggggcc 33358407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 43021092 - 43021055
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaag 133  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  43021092 agcatttatataagttgtttatccaaacagggcctaag 43021055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000004; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 15718544 - 15718585
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagtcta 137  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  15718544 agcatctatataagctgtttatccaaacggggcctaagtcta 15718585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 1171378 - 1171414
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaa 132  Q
    |||||||||||||||||||||||||||||||||||||    
T  1171378 agcatctatataagttgtttatccaaacggggcctaa 1171414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 1940284 - 1940244
Alignment:
Q  91 tcatcagcatctatataagttgtttatccaaacggggccta 131  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  1940284 tcataagcatctatataagttgtttatccaaacggggccta 1940244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 38829985 - 38830021
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaa 132  Q
    |||||||||||||||||||||||||||||||||||||    
T  38829985 agcatctatataagttgtttatccaaacggggcctaa 38830021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 46410121 - 46410157
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaa 132  Q
    |||||||||||||||||||||||||||||||||||||    
T  46410121 agcatctatataagttgtttatccaaacggggcctaa 46410157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 130
Target Start/End: Complemental strand, 1168743 - 1168709
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||||||||||||||||||||||||    
T  1168743 agcatctatataagttgtttatccaaacggggcct 1168709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 130
Target Start/End: Complemental strand, 42369674 - 42369640
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||||||||||||||||||||||||    
T  42369674 agcatctatataagttgtttatccaaacggggcct 42369640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 20097548 - 20097589
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagtcta 137  Q
    |||||||||||||| |||||||||||||||||||||| ||||    
T  20097548 agcatctatataagctgtttatccaaacggggcctaaatcta 20097589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 7146523 - 7146559
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaa 132  Q
    |||||||||||||| ||||||||||||||||||||||    
T  7146523 agcatctatataagctgtttatccaaacggggcctaa 7146559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 23323494 - 23323534
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagtct 136  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  23323494 agcatctatataagctgtttatccaaacggggccttagtct 23323534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 128
Target Start/End: Complemental strand, 26579540 - 26579508
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggc 128  Q
    |||||||||||||||||||||||||||||||||    
T  26579540 agcatctatataagttgtttatccaaacggggc 26579508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 38172626 - 38172662
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaa 132  Q
    |||||||||||||| ||||||||||||||||||||||    
T  38172626 agcatctatataagatgtttatccaaacggggcctaa 38172662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 127
Target Start/End: Complemental strand, 969882 - 969851
Alignment:
Q  96 agcatctatataagttgtttatccaaacgggg 127  Q
    ||||||||||||||||||||||||||||||||    
T  969882 agcatctatataagttgtttatccaaacgggg 969851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 131
Target Start/End: Complemental strand, 17586720 - 17586685
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggccta 131  Q
    ||||||||||||||||||||||||||| ||||||||    
T  17586720 agcatctatataagttgtttatccaaatggggccta 17586685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 127
Target Start/End: Original strand, 32672515 - 32672546
Alignment:
Q  96 agcatctatataagttgtttatccaaacgggg 127  Q
    ||||||||||||||||||||||||||||||||    
T  32672515 agcatctatataagttgtttatccaaacgggg 32672546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 40093364 - 40093395
Alignment:
Q  99 atctatataagttgtttatccaaacggggcct 130  Q
    ||||||||||||||||||||||||||||||||    
T  40093364 atctatataagttgtttatccaaacggggcct 40093395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 135
Target Start/End: Complemental strand, 52752547 - 52752508
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagtc 135  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  52752547 agcatctatataagctgtttatccaaacggggccttagtc 52752508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 130
Target Start/End: Original strand, 2478479 - 2478513
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||||||||||||||||| ||||||    
T  2478479 agcatctatataagttgtttatccaaacagggcct 2478513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 130
Target Start/End: Original strand, 17592547 - 17592581
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||||||||||||||||| ||||||    
T  17592547 agcatctatataagttgtttatccaaacagggcct 17592581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 130
Target Start/End: Complemental strand, 39259731 - 39259697
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||| ||||||||||||||||||||    
T  39259731 agcatctatataagctgtttatccaaacggggcct 39259697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 8078982 - 8078949
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcc 129  Q
    |||||||||||||| |||||||||||||||||||    
T  8078982 agcatctatataagctgtttatccaaacggggcc 8078949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 51358705 - 51358672
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcc 129  Q
    |||||||||||||| |||||||||||||||||||    
T  51358705 agcatctatataagctgtttatccaaacggggcc 51358672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 125
Target Start/End: Original strand, 52088475 - 52088504
Alignment:
Q  96 agcatctatataagttgtttatccaaacgg 125  Q
    ||||||||||||||||||||||||||||||    
T  52088475 agcatctatataagttgtttatccaaacgg 52088504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 52697518 - 52697551
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcc 129  Q
    |||||||||||||| |||||||||||||||||||    
T  52697518 agcatctatataagctgtttatccaaacggggcc 52697551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000002; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 9007325 - 9007289
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaa 132  Q
    |||||||||||||||||||||||||||||||||||||    
T  9007325 agcatctatataagttgtttatccaaacggggcctaa 9007289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 26602319 - 26602283
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaa 132  Q
    |||||||||||||||||||||||||||||||||||||    
T  26602319 agcatctatataagttgtttatccaaacggggcctaa 26602283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 8373632 - 8373594
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagt 134  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  8373632 agcatctatataagttgtttatccaaacggggcttaagt 8373594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 16070289 - 16070325
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaa 132  Q
    |||||||||||||| ||||||||||||||||||||||    
T  16070289 agcatctatataagctgtttatccaaacggggcctaa 16070325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 131
Target Start/End: Complemental strand, 1165085 - 1165050
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggccta 131  Q
    ||||||||||||||||||||||||||||| ||||||    
T  1165085 agcatctatataagttgtttatccaaacgaggccta 1165050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 129
Target Start/End: Complemental strand, 27678524 - 27678493
Alignment:
Q  98 catctatataagttgtttatccaaacggggcc 129  Q
    ||||||||||||||||||||||||||||||||    
T  27678524 catctatataagttgtttatccaaacggggcc 27678493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 130
Target Start/End: Original strand, 19360835 - 19360869
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    ||||||||||||| |||||||||||||||||||||    
T  19360835 agcatctatataaattgtttatccaaacggggcct 19360869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 27421537 - 27421575
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagt 134  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  27421537 agcatctatataagctgtttatctaaacggggcctaagt 27421575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 130
Target Start/End: Complemental strand, 35419951 - 35419917
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||| ||||||||||||||||||||    
T  35419951 agcatctatataagctgtttatccaaacggggcct 35419917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 41818030 - 41817997
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcc 129  Q
    |||||||||||||| |||||||||||||||||||    
T  41818030 agcatctatataagctgtttatccaaacggggcc 41817997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000002; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 33905317 - 33905277
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagtct 136  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  33905317 agcatctatataagctgtttatccaaacggggcctaagtct 33905277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 96 - 135
Target Start/End: Original strand, 851771 - 851810
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagtc 135  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  851771 agcatctatataagttgtttatccaaacggggcccaagtc 851810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 96 - 131
Target Start/End: Complemental strand, 3872509 - 3872474
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggccta 131  Q
    ||||||||||||||||||||||||||||||||||||    
T  3872509 agcatctatataagttgtttatccaaacggggccta 3872474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 1110158 - 1110195
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaag 133  Q
    |||||||||||||| |||||||||||||||||||||||    
T  1110158 agcatctatataagctgtttatccaaacggggcctaag 1110195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 26322549 - 26322512
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaag 133  Q
    |||||||||||||| |||||||||||||||||||||||    
T  26322549 agcatctatataagctgtttatccaaacggggcctaag 26322512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 19900691 - 19900655
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaa 132  Q
    |||||||||||||||||||||||||||||| ||||||    
T  19900691 agcatctatataagttgtttatccaaacggagcctaa 19900655  T

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Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 1481299 - 1481268
Alignment:
Q  99 atctatataagttgtttatccaaacggggcct 130  Q
    ||||||||||||||||||||||||||||||||    
T  1481299 atctatataagttgtttatccaaacggggcct 1481268  T

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Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 130
Target Start/End: Complemental strand, 4231687 - 4231653
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcct 130  Q
    |||||||||||||||||||||||||||||| ||||    
T  4231687 agcatctatataagttgtttatccaaacggagcct 4231653  T

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Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 126
Target Start/End: Original strand, 5734260 - 5734290
Alignment:
Q  96 agcatctatataagttgtttatccaaacggg 126  Q
    |||||||||||||||||||||||||||||||    
T  5734260 agcatctatataagttgtttatccaaacggg 5734290  T

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Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 18806146 - 18806113
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcc 129  Q
    |||||||||||||||||||||||||||| |||||    
T  18806146 agcatctatataagttgtttatccaaacagggcc 18806113  T

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Target: scaffold0920 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0920
Description:

Target: scaffold0920; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 189 - 227
Alignment:
Q  96 agcatctatataagttgtttatccaaacggggcctaagt 134  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  189 agcatctatataagctgtttatccaaacggggcccaagt 227  T

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