View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0585_low_9 (Length: 328)

Name: NF0585_low_9
Description: NF0585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0585_low_9
NF0585_low_9
[»] chr7 (11 HSPs)
chr7 (30-314)||(39564158-39564442)
chr7 (74-314)||(39338658-39338898)
chr7 (95-310)||(39353505-39353720)
chr7 (95-314)||(39537986-39538205)
chr7 (96-314)||(39366011-39366229)
chr7 (74-314)||(39547423-39547663)
chr7 (138-309)||(39589315-39589486)
chr7 (98-314)||(39622043-39622259)
chr7 (131-312)||(39575070-39575251)
chr7 (96-312)||(1084781-1084998)
chr7 (156-205)||(42133041-42133090)
[»] chr2 (4 HSPs)
chr2 (138-314)||(44223164-44223340)
chr2 (138-314)||(44233986-44234162)
chr2 (159-314)||(44211023-44211178)
chr2 (186-250)||(43457605-43457669)
[»] chr4 (3 HSPs)
chr4 (138-297)||(2877208-2877367)
chr4 (162-297)||(2886975-2887110)
chr4 (162-235)||(2897266-2897339)
[»] chr1 (1 HSPs)
chr1 (138-297)||(2160857-2161016)
[»] chr3 (1 HSPs)
chr3 (132-241)||(49773219-49773328)
[»] chr8 (1 HSPs)
chr8 (189-241)||(4501297-4501349)


Alignment Details
Target: chr7 (Bit Score: 277; Significance: 1e-155; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 30 - 314
Target Start/End: Original strand, 39564158 - 39564442
Alignment:
Q  30 acaggtacatgaatgcagtgtgattaaagtggctgattcatgtcaaaatttcaagtaattgagaaactaacctttctggtttcagcattgatgtctgggg 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  39564158 acaggtacatgaatgcagtgtgattaaagtggctgattcatgtcaaaatttcaagtaattgagaaactaacctttctagtttcagcattgatgtctgggg 39564257  T
Q  130 acaaccggagccacgctgaatagagcaaagattcatagacagtaacataaggagagtggatatcattttgctcacagtacccagaaattcttgcaaaggt 229  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39564258 acaaccggagccatgctgaatagagcaaagattcatagacagtaacataaggagagtggatatcattttgctcacagtacccagaaattcttgcaaaggt 39564357  T
Q  230 ttcttgcttctttggaaagccggaaattgtgatgttcccaccaatatatcctccggttttcctaccagaaagcacatccatcaga 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39564358 ttcttgcttctttggaaagccggaaattgtgatgttcccaccaatatatcctccggttttcctaccagaaagcacatccatcaga 39564442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 74 - 314
Target Start/End: Complemental strand, 39338898 - 39338658
Alignment:
Q  74 aaaatttcaagtaattgagaaactaacctttctggtttcagcattgatgtctggggacaaccggagccacgctgaatagagcaaagattcatagacagta 173  Q
    ||||| |||||| ||| | | |||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||    
T  39338898 aaaatctcaagtgattaaaatactaacctttctggtttcagcattgatgtcaggggacaatcggagccatgctgaatagagcaaagattcatagacagta 39338799  T
Q  174 acataaggagagtggatatcattttgctcacagtacccagaaattcttgcaaaggtttcttgcttctttggaaagccggaaattgtgatgttcccaccaa 273  Q
    |||| |||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  39338798 acatgaggagaatggatatcagtttgctcacagtatccagaaattcttgcaaaggtttcttgcttctttggaaagccggaaattttgatgttcccaccaa 39338699  T
Q  274 tatatcctccggttttcctaccagaaagcacatccatcaga 314  Q
    ||||||| || ||||| ||||||||||||||||||||||||    
T  39338698 tatatccaccagtttttctaccagaaagcacatccatcaga 39338658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 95 - 310
Target Start/End: Complemental strand, 39353720 - 39353505
Alignment:
Q  95 actaacctttctggtttcagcattgatgtctggggacaaccggagccacgctgaatagagcaaagattcatagacagtaacataaggagagtggatatca 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||| |||||||||    
T  39353720 actaacctttctggtttcagcattgatgtctggggacaaccggagccatgttggatagagcaaagattcatagacagtaacataaggagaatggatatca 39353621  T
Q  195 ttttgctcacagtacccagaaattcttgcaaaggtttcttgcttctttggaaagccggaaattgtgatgttcccaccaatatatcctccggttttcctac 294  Q
     ||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||| ||||    
T  39353620 gtttgctcacagtatccagaaattcttgcaaaggtttcttgcttttttggatagccggaaattgtgatgttcccaccaatatatccaccggtttttctac 39353521  T
Q  295 cagaaagcacatccat 310  Q
    ||||||||||||||||    
T  39353520 cagaaagcacatccat 39353505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 95 - 314
Target Start/End: Original strand, 39537986 - 39538205
Alignment:
Q  95 actaacctttctggtttcagcattgatgtctggggacaaccggagccacgctgaatagagcaaagattcatagacagtaacataaggagagtggatatca 194  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39537986 actaaccttcctggtttcagcattgatgtctggagacaaccggagccatgctgaatagagcaaagattcatagacagtaacataaggagaatggatatca 39538085  T
Q  195 ttttgctcacagtacccagaaattcttgcaaaggtttcttgcttctttggaaagccggaaattgtgatgttcccaccaatatatcctccggttttcctac 294  Q
     ||||||||||||| || ||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  39538086 gtttgctcacagtatcctgaaattcttgcaaaggtatcttgcttctttggatagccagaaattgtgatgttcccaccaatatatccaccagtttttctac 39538185  T
Q  295 cagaaagcacatccatcaga 314  Q
    ||||||||||||||||||||    
T  39538186 cagaaagcacatccatcaga 39538205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 96 - 314
Target Start/End: Complemental strand, 39366229 - 39366011
Alignment:
Q  96 ctaacctttctggtttcagcattgatgtctggggacaaccggagccacgctgaatagagcaaagattcatagacagtaacataaggagagtggatatcat 195  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||||| |||||| |||||||||     
T  39366229 ctaacctttctggtttcagcattgatgtcaggggacaatcggagccatgctgaatagagtaaagattcatagacagtaacatgaggagaatggatatcag 39366130  T
Q  196 tttgctcacagtacccagaaattcttgcaaaggtttcttgcttctttggaaagccggaaattgtgatgttcccaccaatatatcctccggttttcctacc 295  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||| || ||||| |||||    
T  39366129 tttgctcgcagtatccagaaattcttgcaaaggtttcttgcttctttggatagccagatattgtgatgttcccaccaatatatccaccagtttttctacc 39366030  T
Q  296 agaaagcacatccatcaga 314  Q
    |||||||||||||||||||    
T  39366029 agaaagcacatccatcaga 39366011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 74 - 314
Target Start/End: Original strand, 39547423 - 39547663
Alignment:
Q  74 aaaatttcaagtaattgagaaactaacctttctggtttcagcattgatgtctggggacaaccggagccacgctgaatagagcaaagattcatagacagta 173  Q
    ||||| |||||| ||| | | |||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||    
T  39547423 aaaatctcaagtgattaaaatactaacctttctggtttcagcattgatgtcaggggacaatcggagccatgctgaatagagcaaagattcatagacagta 39547522  T
Q  174 acataaggagagtggatatcattttgctcacagtacccagaaattcttgcaaaggtttcttgcttctttggaaagccggaaattgtgatgttcccaccaa 273  Q
    |||| |||||| ||||||||| ||||||||||||| || ||||||||||||||||| ||||||||||||||| |||| || |||||||||||||||||||    
T  39547523 acatgaggagaatggatatcagtttgctcacagtatcctgaaattcttgcaaaggtatcttgcttctttggatagccagatattgtgatgttcccaccaa 39547622  T
Q  274 tatatcctccggttttcctaccagaaagcacatccatcaga 314  Q
    ||||||| || ||||| ||||||||||| ||||||||||||    
T  39547623 tatatccaccagtttttctaccagaaagtacatccatcaga 39547663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 138 - 309
Target Start/End: Original strand, 39589315 - 39589486
Alignment:
Q  138 agccacgctgaatagagcaaagattcatagacagtaacataaggagagtggatatcattttgctcacagtacccagaaattcttgcaaaggtttcttgct 237  Q
    ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  39589315 agccatgctgaatagagcaaagattcatatacagtaacatgaggagagtggatatcattttgctcacagtatccagaaattcttgcaaatgtttcttgct 39589414  T
Q  238 tctttggaaagccggaaattgtgatgttcccaccaatatatcctccggttttcctaccagaaagcacatcca 309  Q
    |||| ||| | || |||||||||||| |||||||||||||||| || ||||| |||||||||||||||||||    
T  39589415 tcttaggatatccagaaattgtgatggtcccaccaatatatccaccagtttttctaccagaaagcacatcca 39589486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 98 - 314
Target Start/End: Original strand, 39622043 - 39622259
Alignment:
Q  98 aacctttctggtttcagcattgatgtctggggacaaccggagccacgctgaatagagcaaagattcatagacagtaacataaggagagtggatatcattt 197  Q
    |||||| ||||||||||||||||| ||||  ||||| |||||||| || ||| ||||||| |||||||| ||||||||||||||||| ||||||| ||||    
T  39622043 aaccttcctggtttcagcattgatttctgcagacaatcggagccatgccgaaaagagcaatgattcatatacagtaacataaggagaatggatataattt 39622142  T
Q  198 tgctcacagtacccagaaattcttgcaaaggtttcttgcttctttggaaagccggaaattgtgatgttcccaccaatatatcctccggttttcctaccag 297  Q
    || |||||||| ||| ||| ||||||||||||||| |||||||||| | |||| |||||||||||| |||||||||||||||||| |||||| || ||||    
T  39622143 tgttcacagtatccacaaactcttgcaaaggtttcctgcttctttgaatagccagaaattgtgatggtcccaccaatatatcctctggtttttcttccag 39622242  T
Q  298 aaagcacatccatcaga 314  Q
      || ||||||||||||    
T  39622243 ctagtacatccatcaga 39622259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 131 - 312
Target Start/End: Original strand, 39575070 - 39575251
Alignment:
Q  131 caaccggagccacgctgaatagagcaaagattcatagacagtaacataaggagagtggatatcattttgctcacagtacccagaaattcttgcaaaggtt 230  Q
    |||||||||||| ||||||||||||||||| |||||||| |||| || ||||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  39575070 caaccggagccatgctgaatagagcaaagactcatagaccgtaatatgaggagagtgtatatcattttgctcacagtatccggaaattcttgcaaaggtt 39575169  T
Q  231 tcttgcttctttggaaagccggaaattgtgatgttcccaccaatatatcctccggttttcctaccagaaagcacatccatca 312  Q
    |||||||| || |||   ||||||| |||||||||||||| ||||||||| ||  |||||||||||| ||| ||||||||||    
T  39575170 tcttgctttttgggatgcccggaaactgtgatgttcccactaatatatcccccacttttcctaccagcaagtacatccatca 39575251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 96 - 312
Target Start/End: Original strand, 1084781 - 1084998
Alignment:
Q  96 ctaacctttctggtttcagcattgatgtctggggacaaccggagccacgctgaatagagcaaagattcatagacagtaacataaggagagtggatatcat 195  Q
    |||||||| |||||||||||||| ||||| | || ||| |||||||| ||||||||||||||||| || |||||||||| || |||||| ||||||||      
T  1084781 ctaaccttcctggtttcagcattaatgtccgaggtcaatcggagccatgctgaatagagcaaagactcgtagacagtaaaatgaggagaatggatatcta 1084880  T
Q  196 tttgctcacagtacccagaaattcttgcaaaggtttcttgc--ttctttggaaagccggaaattgtgatgttcccaccaatatatcctccggttttccta 293  Q
    ||||||||||||| ||||||||||||| ||| |||||||||  |||| |||| |||| |||||| ||||||||||||||||||||||  | ||||| |||    
T  1084881 tttgctcacagtatccagaaattcttgtaaatgtttcttgcttttctatggatagccagaaattatgatgttcccaccaatatatccatcagtttttcta 1084980  T
Q  294 ccagaaagcacatccatca 312  Q
    |||| ||||||||||||||    
T  1084981 ccag-aagcacatccatca 1084998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 42133041 - 42133090
Alignment:
Q  156 aaagattcatagacagtaacataaggagagtggatatcattttgctcaca 205  Q
    ||||||||||||||||| ||||| ||||| || |||||||||||||||||    
T  42133041 aaagattcatagacagttacatagggagaatgaatatcattttgctcaca 42133090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 9e-24; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 138 - 314
Target Start/End: Original strand, 44223164 - 44223340
Alignment:
Q  138 agccacgctgaatagagcaaagattcatagacagtaacataaggagagtggatatcattttgctcacagtacccagaaattcttgcaaaggtttcttgct 237  Q
    |||||||| ||||| |||||||| ||||| || |||||||  || || ||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||    
T  44223164 agccacgccgaataaagcaaagactcataaactgtaacatgcggtgaatggatatcattctgctcacagtagccagaaattctagcaaatgtttcttgct 44223263  T
Q  238 tctttggaaagccggaaattgtgatgttcccaccaatatatcctccggttttcctaccagaaagcacatccatcaga 314  Q
    | || ||  | || ||||   ||||||  ||| |||||||||| || |||||||||||||  || ||||||||||||    
T  44223264 ttttagggtacccagaaaccttgatgtctccatcaatatatccacctgttttcctaccagccagaacatccatcaga 44223340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 138 - 314
Target Start/End: Original strand, 44233986 - 44234162
Alignment:
Q  138 agccacgctgaatagagcaaagattcatagacagtaacataaggagagtggatatcattttgctcacagtacccagaaattcttgcaaaggtttcttgct 237  Q
    ||||||||||| || |||||||| ||||| || ||||||| ||| || ||||||||||| ||||||||||| || || ||||| ||||| ||||||||||    
T  44233986 agccacgctgagtaaagcaaagactcataaactgtaacatgaggtgaatggatatcattctgctcacagtaaccggagattctagcaaatgtttcttgct 44234085  T
Q  238 tctttggaaagccggaaattgtgatgttcccaccaatatatcctccggttttcctaccagaaagcacatccatcaga 314  Q
    | || ||| | || ||||   ||||||  ||| |||||||||| || |||||||||||||  || ||||||||||||    
T  44234086 ttttaggatacccagaaaccttgatgtctccatcaatatatccacctgttttcctaccagccagaacatccatcaga 44234162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 314
Target Start/End: Original strand, 44211023 - 44211178
Alignment:
Q  159 gattcatagacagtaacataaggagagtggatatcattttgctcacagtacccagaaattcttgcaaaggtttcttgcttctttggaaagccggaaattg 258  Q
    |||||||| || ||||||| ||| || || |||||||| || |||||||| ||||| ||||| ||||| ||||||||||| || ||  | || ||||       
T  44211023 gattcataaactgtaacatgaggtgaatgaatatcattctgttcacagtagccagatattctagcaaatgtttcttgctttttagggtacccagaaacct 44211122  T
Q  259 tgatgttcccaccaatatatcctccggttttcctaccagaaagcacatccatcaga 314  Q
    ||||||  ||| |||||||||| || |||||||||||||  || ||||||||||||    
T  44211123 tgatgtctccatcaatatatccacctgttttcctaccagccagaacatccatcaga 44211178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 43457605 - 43457669
Alignment:
Q  186 tggatatcattttgctcacagtacccagaaattcttgcaaaggtttcttgcttctttggaaagcc 250  Q
    ||||||||  |||| || ||||| ||||||||||||||||| |||||||| ||||| || |||||    
T  43457605 tggatatcggtttgttcgcagtatccagaaattcttgcaaatgtttcttgattcttagggaagcc 43457669  T

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Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 297
Target Start/End: Complemental strand, 2877367 - 2877208
Alignment:
Q  138 agccacgctgaatagagcaaagattcatagacagtaacataaggagagtggatatcattttgctcacagtacccagaaattcttgcaaaggtttcttgct 237  Q
    ||||| |||||||| || || || |||||||||||||| | ||| |||||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||    
T  2877367 agccaagctgaatacagtaaggactcatagacagtaacttgaggggagtggatatcattctgctcacaatagccagagattctagcaaatgtttcttgct 2877268  T
Q  238 tctttggaaagccggaaattgtgatgttcccaccaatatatcctccggttttcctaccag 297  Q
    | || ||  | || |||||| | ||| ||||| ||||||| || |  |||||||||||||    
T  2877267 ttttagggtaaccagaaatttttatgctcccatcaatataaccactagttttcctaccag 2877208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 297
Target Start/End: Complemental strand, 2887110 - 2886975
Alignment:
Q  162 tcatagacagtaacataaggagagtggatatcattttgctcacagtacccagaaattcttgcaaaggtttcttgcttctttggaaagccggaaattgtga 261  Q
    |||||||||||||||| |||||| ||||||||||| |||||||| || ||||| ||||  ||||| |||||||| || || ||  | || |||||| | |    
T  2887110 tcatagacagtaacatgaggagaatggatatcattctgctcacaataaccagagattcgagcaaacgtttcttgttttttagggtacccagaaattttta 2887011  T
Q  262 tgttcccaccaatatatcctccggttttcctaccag 297  Q
    || ||||  ||||||| || || |||||||||||||    
T  2887010 tgctcccgtcaatataaccaccagttttcctaccag 2886975  T

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Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 2897266 - 2897339
Alignment:
Q  162 tcatagacagtaacataaggagagtggatatcattttgctcacagtacccagaaattcttgcaaaggtttcttg 235  Q
    |||||||||||||||| |||||| ||||||||||| |||||||| || ||||| ||||  ||||| ||||||||    
T  2897266 tcatagacagtaacatgaggagaatggatatcattctgctcacaataaccagagattcgagcaaacgtttcttg 2897339  T

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Target: chr1 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 138 - 297
Target Start/End: Original strand, 2160857 - 2161016
Alignment:
Q  138 agccacgctgaatagagcaaagattcatagacagtaacataaggagagtggatatcattttgctcacagtacccagaaattcttgcaaaggtttcttgct 237  Q
    ||||| || ||||| | |||||||||||| || ||||||| ||| || |||||||||  |||||| || || || || || |  ||||| |||| ||| |    
T  2160857 agccatgccgaatataacaaagattcataaactgtaacattaggtgaatggatatcaaattgctcgcaatatcccgatatgcgagcaaatgttttttgat 2160956  T
Q  238 tctttggaaagccggaaattgtgatgttcccaccaatatatcctccggttttcctaccag 297  Q
    |||||||| ||||||| ||||||||||| ||| |||||||||| || |||||||| ||||    
T  2160957 tctttggatagccggatattgtgatgtttccatcaatatatccaccagttttccttccag 2161016  T

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Target: chr3 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 49773328 - 49773219
Alignment:
Q  132 aaccggagccacgctgaatagagcaaagattcatagacagtaacataaggagagtggatatcattttgctcacagtacccagaaattcttgcaaaggttt 231  Q
    ||||||||||| || ||||| |  | ||||||||||||||||||||  ||||||||||||||| ||||||||||||| || || || |  | ||| ||||    
T  49773328 aaccggagccatgcagaataaacaagagattcatagacagtaacatggggagagtggatatcagtttgctcacagtatcctgatatccgagaaaatgttt 49773229  T
Q  232 cttgcttctt 241  Q
    ||||||||||    
T  49773228 cttgcttctt 49773219  T

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Target: chr8 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 4501349 - 4501297
Alignment:
Q  189 atatcattttgctcacagtacccagaaattcttgcaaaggtttcttgcttctt 241  Q
    |||||| |||| ||||| || ||||||| |||||||||||||||||| |||||    
T  4501349 atatcagtttgttcacaataaccagaaactcttgcaaaggtttcttggttctt 4501297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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