View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0586_high_56 (Length: 228)
Name: NF0586_high_56
Description: NF0586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0586_high_56 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 11 - 228
Target Start/End: Complemental strand, 25873641 - 25873423
Alignment:
| Q |
11 |
actaggtaaaagtagtacacacaccatacgttctacaaacaattaggagaaaatatgggcgagatcattaacaaacaatttcacacaacctttttaaatt |
110 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
25873641 |
actaggtaaaagcagtacacacaccatacgttctacaaacaattaggagaaaatatgggtaagatcattaacaaacaatttcacacaacctttttaaatt |
25873542 |
T |
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| Q |
111 |
ggacatcaccttacacaaagatacaaaacactgcatgaaattgttgatgaagttc-agtctaaagattggtcattgatcgagtataaagtaactgaggtg |
209 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||| |
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| T |
25873541 |
ggacatcaccttacacaaagatacaaaacactccatgaaattgttgatgaagttcgggtctaaagattggtcactgattgagtataaagtaactgaggtc |
25873442 |
T |
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| Q |
210 |
tcaattgaattgcataatt |
228 |
Q |
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||||||||||||||||||| |
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| T |
25873441 |
tcaattgaattgcataatt |
25873423 |
T |
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