View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0586_low_2 (Length: 732)
Name: NF0586_low_2
Description: NF0586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0586_low_2 |
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Alignment Details
Target: chr1 (Bit Score: 587; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 587; E-Value: 0
Query Start/End: Original strand, 97 - 725
Target Start/End: Complemental strand, 37058154 - 37057529
Alignment:
| Q |
97 |
cttttctagtgaagttttcccttttttcttcacttaaaaattaacacaaggattgtaatatttgatcaaagatgttgttgcaatgttatttcaacttcca |
196 |
Q |
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| T |
37058154 |
cttttctagtgaagttttcccttttttcttcacttaaaaattaacacaaggattgtaatatttgatcaaagatgttgttgcaatgttatttcaacttcca |
37058055 |
T |
|
| Q |
197 |
aactttattcagccctcaagtttaagagtttgttttacttatatctaaaggttcatcacatgctaatagaatggtcccatccacatgagattttaaaaaa |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37058054 |
aactttattcagccctcaagtttaagagtttgttttacttatatctaaaggttcatcacatgctaatagaatggtcccatccacatgagattttaaaaaa |
37057955 |
T |
|
| Q |
297 |
tatatccacaattgtgattagatgaatactttttaagtatctaaaagttttgttgaatattgttgtttctgaccaggttaagatccattttttcagagga |
396 |
Q |
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| T |
37057954 |
tatatccacaattgtgattagatgaatactctttaagtatctaaaagttttgttgaatattgttgtttctgaccaggttaagatccattttttcagagga |
37057855 |
T |
|
| Q |
397 |
ttggatccttccaaaccatctttaatctgtactgcacatgtgtccctggacaattgttcggattagagttagaaagaccaaaaaccttaatccaatagac |
496 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37057854 |
ttggatccttccaaaccatctttaatct---ctgcacatgtgtccctggacaattgttcggattagagttagaaagaccaaaaaccttaatccaatagac |
37057758 |
T |
|
| Q |
497 |
tccatccaggtgcacgcttttctaccctaaaaatcttgtatatatttgatgcattttatacttagtttgagtgtttgcatgtataccattccccttcgca |
596 |
Q |
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||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
37057757 |
tccatccaggtgcacacttttctaccataaaaatcttgtatatatttgacgcattttatacttagttggagtgtttgcatgtataccattccccttcgca |
37057658 |
T |
|
| Q |
597 |
agagaatgagttgttgttcaaagtttaaccacttcaacgcctccgcaacaatcatcggactgtagatcttagatcccatcatgtcgaattagatacatat |
696 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
37057657 |
agagaatgagttgttgttcaaagtttaaccacttcaacgcctccgcaacaatcatcggaccgtagatcttagatcccatcatgtcgaattagatacatat |
37057558 |
T |
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| Q |
697 |
ccatcattcaatcacttaatttcatatca |
725 |
Q |
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| T |
37057557 |
caatcattcaatcacttaatttcatatca |
37057529 |
T |
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