View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0586_low_33 (Length: 364)
Name: NF0586_low_33
Description: NF0586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0586_low_33 |
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Alignment Details
Target: chr5 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 6082043 - 6081754
Alignment:
| Q |
1 |
tagaacatagaagttgagaaagtaaagagaacaatgaatatgataacgtgttgtgcttgatatctcaccgacgctctgagttcaaggaaaatgactcaca |
100 |
Q |
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| T |
6082043 |
tagaacatagaagttgagaaagtgaagagaacaatgaatatgataacgtgttgtgtttgatatctcaccgacgctctgagttcaaggaaaatgactcaca |
6081944 |
T |
|
| Q |
101 |
ctcctcaactaacaactatctctgctttctctttattataataacttcaaaagattggatttggtatacaaactactaataaagaaatcttataaagata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6081943 |
ctcctcaactaacaactatctctgctttctctttattataataacttcaaaagattggatttggtatacaaactactaataaagaaatcttataaagata |
6081844 |
T |
|
| Q |
201 |
ttttaactaacttatttaatgttctcttttctaatatatatacttattcataaatcttcttataaaattaatagaagagaaatgatatat |
290 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6081843 |
ttttaactaacttatttaatgttcttttttctaatatatatacttcttcataaatcttcttataaaattaatagaagagaaatgatatat |
6081754 |
T |
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