View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0586_low_34 (Length: 361)

Name: NF0586_low_34
Description: NF0586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0586_low_34
NF0586_low_34
[»] chr7 (59 HSPs)
chr7 (97-244)||(28342436-28342583)
chr7 (97-242)||(23101387-23101532)
chr7 (97-244)||(29614728-29614875)
chr7 (98-235)||(39784189-39784326)
chr7 (97-243)||(3023015-3023161)
chr7 (97-243)||(18838478-18838624)
chr7 (97-243)||(28034770-28034916)
chr7 (97-243)||(9882202-9882347)
chr7 (98-243)||(33382727-33382872)
chr7 (97-233)||(7993231-7993367)
chr7 (97-243)||(37972832-37972978)
chr7 (105-243)||(41827401-41827539)
chr7 (102-243)||(8675427-8675567)
chr7 (97-244)||(509745-509882)
chr7 (97-243)||(44121875-44122011)
chr7 (97-243)||(12740462-12740607)
chr7 (97-240)||(44256734-44256877)
chr7 (97-242)||(40460683-40460818)
chr7 (97-214)||(973280-973397)
chr7 (97-226)||(43187339-43187468)
chr7 (97-214)||(47914362-47914479)
chr7 (97-243)||(29585603-29585739)
chr7 (97-214)||(34695369-34695486)
chr7 (97-243)||(37328016-37328152)
chr7 (97-243)||(39028186-39028322)
chr7 (97-243)||(46405406-46405542)
chr7 (97-214)||(7718356-7718473)
chr7 (97-214)||(7719254-7719371)
chr7 (97-214)||(30440892-30441009)
chr7 (97-214)||(40996643-40996760)
chr7 (97-202)||(43581096-43581201)
chr7 (97-214)||(44343390-44343507)
chr7 (97-223)||(12963790-12963911)
chr7 (97-214)||(12893504-12893621)
chr7 (97-214)||(18914729-18914846)
chr7 (97-214)||(32142911-32143028)
chr7 (97-214)||(47879264-47879381)
chr7 (97-223)||(10068556-10068682)
chr7 (97-202)||(20275269-20275374)
chr7 (97-243)||(32883871-32884002)
chr7 (109-214)||(39219371-39219476)
chr7 (97-214)||(7113548-7113665)
chr7 (145-214)||(17001037-17001106)
chr7 (97-214)||(34009109-34009226)
chr7 (97-151)||(10676477-10676531)
chr7 (97-163)||(43679510-43679576)
chr7 (97-141)||(19251628-19251672)
chr7 (145-205)||(47066821-47066881)
chr7 (147-243)||(33892212-33892321)
chr7 (196-243)||(29893173-29893220)
chr7 (97-151)||(25805781-25805835)
chr7 (134-215)||(19810915-19810996)
chr7 (97-141)||(31638971-31639015)
chr7 (97-132)||(17001099-17001134)
chr7 (97-132)||(47066793-47066828)
chr7 (97-138)||(447872-447913)
chr7 (98-214)||(9179970-9180076)
chr7 (98-136)||(3797129-3797167)
chr7 (114-223)||(10617024-10617134)
[»] chr4 (63 HSPs)
chr4 (97-244)||(5441498-5441645)
chr4 (97-244)||(27768150-27768297)
chr4 (97-244)||(37828367-37828514)
chr4 (97-242)||(54341238-54341383)
chr4 (97-244)||(48261221-48261368)
chr4 (97-241)||(51321015-51321159)
chr4 (97-229)||(54853448-54853580)
chr4 (97-233)||(37915921-37916057)
chr4 (97-243)||(32322185-32322331)
chr4 (97-243)||(23987308-23987444)
chr4 (97-243)||(41725219-41725359)
chr4 (97-242)||(30967276-30967411)
chr4 (115-223)||(8711978-8712086)
chr4 (97-243)||(49501485-49501623)
chr4 (97-243)||(49507550-49507688)
chr4 (145-243)||(49834799-49834897)
chr4 (97-214)||(41881077-41881194)
chr4 (97-243)||(44770821-44770965)
chr4 (145-229)||(32683988-32684072)
chr4 (97-211)||(55302937-55303051)
chr4 (97-214)||(12113039-12113156)
chr4 (97-214)||(25331225-25331342)
chr4 (98-214)||(34228578-34228694)
chr4 (97-243)||(5800072-5800208)
chr4 (115-214)||(24736447-24736546)
chr4 (97-243)||(28483993-28484127)
chr4 (97-202)||(3436687-3436792)
chr4 (97-214)||(32950831-32950948)
chr4 (97-214)||(39479350-39479467)
chr4 (97-214)||(41320904-41321021)
chr4 (97-214)||(24130976-24131094)
chr4 (97-214)||(37046445-37046563)
chr4 (101-202)||(1044905-1045006)
chr4 (97-214)||(1112987-1113104)
chr4 (97-214)||(7007468-7007585)
chr4 (109-214)||(30009672-30009777)
chr4 (97-214)||(42786778-42786895)
chr4 (97-188)||(19740929-19741020)
chr4 (97-211)||(50018345-50018449)
chr4 (97-243)||(12913318-12913455)
chr4 (98-202)||(22202110-22202214)
chr4 (97-223)||(36479228-36479343)
chr4 (97-163)||(7249811-7249877)
chr4 (97-240)||(20021427-20021570)
chr4 (97-180)||(25446144-25446227)
chr4 (97-163)||(9163170-9163236)
chr4 (97-151)||(25504697-25504751)
chr4 (97-214)||(46635643-46635754)
chr4 (97-214)||(56445350-56445457)
chr4 (97-141)||(29649735-29649779)
chr4 (97-156)||(23465049-23465108)
chr4 (97-172)||(28371018-28371093)
chr4 (97-163)||(28541792-28541858)
chr4 (97-214)||(31314737-31314844)
chr4 (97-214)||(27454073-27454190)
chr4 (135-243)||(36727916-36728023)
chr4 (97-189)||(53275933-53276025)
chr4 (97-132)||(32684065-32684100)
chr4 (97-132)||(49834890-49834925)
chr4 (97-202)||(39307260-39307365)
chr4 (98-141)||(40537218-40537261)
chr4 (145-219)||(40537150-40537224)
chr4 (134-219)||(11090435-11090520)
[»] chr1 (42 HSPs)
chr1 (97-244)||(6312662-6312809)
chr1 (97-244)||(51701668-51701815)
chr1 (97-244)||(25612245-25612392)
chr1 (97-243)||(9322466-9322612)
chr1 (97-239)||(29396358-29396500)
chr1 (97-239)||(15835023-15835165)
chr1 (97-243)||(28387359-28387505)
chr1 (97-229)||(48177442-48177574)
chr1 (97-243)||(46328130-46328276)
chr1 (97-243)||(38536065-38536201)
chr1 (97-243)||(38558283-38558419)
chr1 (97-223)||(9577418-9577544)
chr1 (98-202)||(35279761-35279865)
chr1 (105-226)||(29219382-29219493)
chr1 (145-229)||(18798607-18798691)
chr1 (97-212)||(35679125-35679240)
chr1 (97-211)||(21222235-21222349)
chr1 (97-214)||(6304247-6304364)
chr1 (97-214)||(19451803-19451920)
chr1 (134-243)||(45272700-45272809)
chr1 (97-214)||(49198264-49198381)
chr1 (98-202)||(31572204-31572308)
chr1 (106-214)||(47780808-47780916)
chr1 (97-224)||(48668770-48668887)
chr1 (97-214)||(50192545-50192662)
chr1 (97-214)||(45760004-45760121)
chr1 (97-214)||(47654346-47654463)
chr1 (97-214)||(29556192-29556310)
chr1 (97-199)||(32588963-32589065)
chr1 (97-214)||(28824368-28824484)
chr1 (97-214)||(37014635-37014752)
chr1 (97-202)||(49418172-49418277)
chr1 (97-189)||(45536032-45536124)
chr1 (134-198)||(5495117-5495181)
chr1 (97-180)||(48524407-48524490)
chr1 (97-132)||(18798579-18798614)
chr1 (97-163)||(730237-730303)
chr1 (97-141)||(955838-955882)
chr1 (97-141)||(43885158-43885202)
chr1 (97-131)||(49230974-49231008)
chr1 (97-151)||(51085883-51085937)
chr1 (170-202)||(33025664-33025696)
[»] chr8 (36 HSPs)
chr8 (97-244)||(14782099-14782246)
chr8 (97-244)||(44725774-44725921)
chr8 (97-243)||(39467433-39467579)
chr8 (97-229)||(9288436-9288568)
chr8 (97-243)||(43166655-43166801)
chr8 (97-233)||(19717856-19717992)
chr8 (97-243)||(26856162-26856308)
chr8 (97-229)||(18958706-18958838)
chr8 (97-229)||(4403202-4403334)
chr8 (97-227)||(10295360-10295492)
chr8 (97-244)||(18305935-18306072)
chr8 (134-243)||(7466457-7466566)
chr8 (97-231)||(32497620-32497744)
chr8 (97-229)||(37857214-37857336)
chr8 (97-227)||(16362291-16362411)
chr8 (97-214)||(24501807-24501924)
chr8 (97-214)||(26374424-26374541)
chr8 (97-229)||(42305774-42305896)
chr8 (97-214)||(42937446-42937563)
chr8 (97-214)||(42938111-42938228)
chr8 (145-227)||(31623818-31623900)
chr8 (97-214)||(7506893-7507010)
chr8 (97-226)||(39189798-39189925)
chr8 (97-199)||(10392246-10392348)
chr8 (97-214)||(2704813-2704930)
chr8 (97-214)||(5576614-5576731)
chr8 (97-214)||(42735271-42735388)
chr8 (97-214)||(23115163-23115280)
chr8 (145-192)||(4031294-4031341)
chr8 (98-151)||(8410455-8410508)
chr8 (97-132)||(4031334-4031369)
chr8 (97-132)||(31623790-31623825)
chr8 (109-214)||(4950010-4950115)
chr8 (98-151)||(13478307-13478360)
chr8 (97-141)||(43959752-43959796)
chr8 (136-214)||(41479221-41479299)
[»] chr6 (16 HSPs)
chr6 (97-244)||(31895790-31895937)
chr6 (98-229)||(14262412-14262543)
chr6 (97-233)||(34759025-34759161)
chr6 (97-243)||(7497170-7497315)
chr6 (97-244)||(4200401-4200538)
chr6 (97-241)||(31067587-31067721)
chr6 (97-244)||(34773503-34773639)
chr6 (97-243)||(30385034-30385168)
chr6 (97-214)||(6197472-6197589)
chr6 (97-202)||(2300744-2300849)
chr6 (97-214)||(1391718-1391835)
chr6 (97-214)||(29076693-29076810)
chr6 (97-214)||(29111667-29111784)
chr6 (97-202)||(7051939-7052044)
chr6 (97-194)||(28002759-28002856)
chr6 (170-214)||(2238678-2238722)
[»] chr5 (23 HSPs)
chr5 (97-244)||(14000069-14000216)
chr5 (97-239)||(39852440-39852582)
chr5 (97-243)||(1152068-1152214)
chr5 (97-243)||(13926026-13926172)
chr5 (97-243)||(7947538-7947684)
chr5 (97-219)||(4550246-4550368)
chr5 (97-237)||(4240433-4240563)
chr5 (97-243)||(5949203-5949339)
chr5 (97-243)||(1461113-1461249)
chr5 (97-233)||(40013687-40013813)
chr5 (97-214)||(21147162-21147279)
chr5 (97-214)||(33656035-33656152)
chr5 (145-232)||(37014037-37014124)
chr5 (97-202)||(7016745-7016850)
chr5 (97-202)||(5272925-5273030)
chr5 (97-214)||(22746392-22746501)
chr5 (97-211)||(32157891-32158008)
chr5 (100-214)||(27458944-27459058)
chr5 (97-202)||(139368-139473)
chr5 (97-189)||(849242-849334)
chr5 (98-214)||(9689753-9689869)
chr5 (97-163)||(6460887-6460953)
chr5 (97-156)||(14465279-14465338)
[»] chr3 (59 HSPs)
chr3 (97-244)||(36674095-36674242)
chr3 (97-242)||(32580270-32580415)
chr3 (97-244)||(34483995-34484142)
chr3 (97-243)||(17946382-17946528)
chr3 (97-239)||(18749706-18749848)
chr3 (97-243)||(44906479-44906625)
chr3 (97-244)||(54628938-54629085)
chr3 (98-227)||(11431621-11431750)
chr3 (97-243)||(26107355-26107501)
chr3 (97-243)||(48379251-48379397)
chr3 (97-233)||(40897238-40897375)
chr3 (97-244)||(31646251-31646396)
chr3 (97-243)||(52617937-52618077)
chr3 (97-243)||(51737693-51737838)
chr3 (97-239)||(52810472-52810614)
chr3 (105-216)||(50903233-50903344)
chr3 (97-231)||(10728629-10728753)
chr3 (97-233)||(39038134-39038260)
chr3 (99-231)||(50762038-50762160)
chr3 (97-214)||(3206200-3206317)
chr3 (97-227)||(37454955-37455075)
chr3 (97-243)||(39842460-39842596)
chr3 (145-239)||(23753377-23753470)
chr3 (97-214)||(996081-996198)
chr3 (97-214)||(10139141-10139258)
chr3 (97-214)||(19253921-19254038)
chr3 (97-214)||(20498303-20498420)
chr3 (97-223)||(6035039-6035165)
chr3 (97-211)||(33807796-33807910)
chr3 (97-214)||(3999640-3999757)
chr3 (97-214)||(37820472-37820589)
chr3 (101-214)||(44762032-44762145)
chr3 (145-222)||(45862983-45863060)
chr3 (97-214)||(54625686-54625803)
chr3 (97-214)||(5825156-5825273)
chr3 (97-214)||(6589658-6589775)
chr3 (105-198)||(20833094-20833187)
chr3 (97-214)||(29448853-29448970)
chr3 (183-244)||(10660691-10660752)
chr3 (97-214)||(40246938-40247055)
chr3 (97-199)||(35337829-35337930)
chr3 (97-202)||(33996548-33996653)
chr3 (97-214)||(25418460-25418577)
chr3 (98-214)||(1439889-1440005)
chr3 (126-214)||(6131228-6131316)
chr3 (134-239)||(15492836-15492942)
chr3 (97-141)||(10660629-10660673)
chr3 (134-226)||(44276506-44276598)
chr3 (98-214)||(53929123-53929239)
chr3 (97-151)||(1440010-1440064)
chr3 (97-163)||(22057856-22057922)
chr3 (97-194)||(51699495-51699592)
chr3 (97-202)||(52114623-52114728)
chr3 (97-137)||(539476-539516)
chr3 (97-141)||(55235278-55235322)
chr3 (97-132)||(23753463-23753498)
chr3 (97-151)||(29030099-29030153)
chr3 (136-214)||(27899467-27899545)
chr3 (170-211)||(33807678-33807719)
[»] scaffold0543 (1 HSPs)
scaffold0543 (97-239)||(10655-10797)
[»] chr2 (35 HSPs)
chr2 (97-244)||(26788882-26789026)
chr2 (97-235)||(18177363-18177501)
chr2 (97-243)||(10657502-10657648)
chr2 (97-243)||(25288255-25288401)
chr2 (97-243)||(28844651-28844797)
chr2 (97-243)||(33135719-33135864)
chr2 (97-243)||(43078659-43078805)
chr2 (145-243)||(6224535-6224633)
chr2 (97-242)||(13833401-13833536)
chr2 (101-233)||(3463772-3463894)
chr2 (97-229)||(28740275-28740397)
chr2 (97-243)||(379033-379169)
chr2 (168-243)||(7027054-7027129)
chr2 (145-243)||(215206-215303)
chr2 (97-214)||(12407476-12407593)
chr2 (97-214)||(16269787-16269904)
chr2 (97-214)||(24776451-24776568)
chr2 (98-214)||(20605333-20605449)
chr2 (97-214)||(14198574-14198691)
chr2 (97-214)||(31170621-31170738)
chr2 (97-202)||(32125349-32125454)
chr2 (97-214)||(35317158-35317275)
chr2 (97-214)||(5093044-5093161)
chr2 (97-214)||(22551760-22551877)
chr2 (97-214)||(43847742-43847859)
chr2 (106-214)||(9120231-9120339)
chr2 (97-240)||(10125270-10125404)
chr2 (97-212)||(305464-305579)
chr2 (97-189)||(1789538-1789630)
chr2 (97-141)||(7026700-7026744)
chr2 (145-223)||(3574971-3575049)
chr2 (97-163)||(44765871-44765937)
chr2 (97-132)||(3574943-3574978)
chr2 (97-132)||(6224626-6224661)
chr2 (145-182)||(7026738-7026775)
[»] scaffold0110 (1 HSPs)
scaffold0110 (97-243)||(39583-39729)
[»] scaffold0042 (1 HSPs)
scaffold0042 (97-243)||(58042-58188)
[»] scaffold0054 (1 HSPs)
scaffold0054 (98-243)||(36876-37018)
[»] scaffold0839 (1 HSPs)
scaffold0839 (103-240)||(3661-3798)
[»] scaffold1504 (1 HSPs)
scaffold1504 (97-243)||(959-1101)
[»] scaffold0306 (1 HSPs)
scaffold0306 (97-244)||(13977-14114)
[»] scaffold0152 (2 HSPs)
scaffold0152 (97-244)||(21213-21350)
scaffold0152 (114-244)||(28463-28584)
[»] scaffold0347 (1 HSPs)
scaffold0347 (134-233)||(14892-14991)
[»] scaffold0400 (1 HSPs)
scaffold0400 (97-214)||(15028-15145)
[»] scaffold0365 (1 HSPs)
scaffold0365 (97-214)||(15671-15788)
[»] scaffold0151 (1 HSPs)
scaffold0151 (97-214)||(38600-38716)
[»] scaffold0037 (1 HSPs)
scaffold0037 (97-202)||(100306-100411)
[»] scaffold0004 (1 HSPs)
scaffold0004 (97-214)||(102190-102307)
[»] scaffold0113 (1 HSPs)
scaffold0113 (97-214)||(38890-39007)
[»] scaffold0276 (1 HSPs)
scaffold0276 (97-219)||(529-651)
[»] scaffold0922 (1 HSPs)
scaffold0922 (97-139)||(4295-4337)
[»] scaffold0007 (1 HSPs)
scaffold0007 (97-157)||(199920-199980)


Alignment Details
Target: chr7 (Bit Score: 136; Significance: 7e-71; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 97 - 244
Target Start/End: Original strand, 28342436 - 28342583
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  28342436 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 28342535  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28342536 tttcttgagattgtttttattttaaaagttactatctttttcttctca 28342583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 97 - 242
Target Start/End: Original strand, 23101387 - 23101532
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  23101387 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 23101486  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttct 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  23101487 tttcttgagattgtttttattttaaaagttactatctttttcttct 23101532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 97 - 244
Target Start/End: Complemental strand, 29614875 - 29614728
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  29614875 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 29614776  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  29614775 tttcttgagattatttttattttaaaagttactatctttttcttctca 29614728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 98 - 235
Target Start/End: Original strand, 39784189 - 39784326
Alignment:
Q  98 aaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagat 197  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  39784189 aaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 39784288  T
Q  198 ttcttgagattgtttttattttaaaagttactatcttt 235  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39784289 ttcttgagattgtttttattttaaaagttactatcttt 39784326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 3023015 - 3023161
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||| ||||||||||||||||||    
T  3023015 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagatgaga 3023114  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| |||||||||||| ||||| |||||||||    
T  3023115 tttcttgagattgtttttcttttaaaagttagtatctctttcttctc 3023161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 18838478 - 18838624
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||| ||||||||||||||||||    
T  18838478 caaatttcgaaagattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgaga 18838577  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||    
T  18838578 tttcttgagattgtttttcttttaaaagttactatctctttcttctc 18838624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 28034916 - 28034770
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || || ||||||||||||||||||||||||||    
T  28034916 caaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaaaagtctttcatgaaaagatgaga 28034817  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||||    
T  28034816 tttcttgagattgtttttcttttacaagttactatctctttcttctc 28034770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 9882347 - 9882202
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||| ||||||    
T  9882347 caaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat-aaaaaatgaga 9882249  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| |||||||||||| ||||| |||||||||    
T  9882248 tttcttgagattgtttttcttttaaaagttattatctctttcttctc 9882202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 98 - 243
Target Start/End: Original strand, 33382727 - 33382872
Alignment:
Q  98 aaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagat 197  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||| |||||||||||||||    
T  33382727 aaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagat 33382826  T
Q  198 ttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    || || ||||||||||| |||||||| ||||||||| |||||||||    
T  33382827 ttatttagattgtttttcttttaaaatttactatctctttcttctc 33382872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 97 - 233
Target Start/End: Original strand, 7993231 - 7993367
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||| || ||||||||||||||||||||||||| |||    
T  7993231 caaatttcgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataaga 7993330  T
Q  197 tttcttgagattgtttttattttaaaagttactatct 233  Q
    |||||||||||||||||| ||||||||||||||||||    
T  7993331 tttcttgagattgtttttcttttaaaagttactatct 7993367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 37972978 - 37972832
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||| ||||||||||||||||||||||||||||  |||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  37972978 caaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 37972879  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
     ||||||||||||||||| |||||||||||| ||||| |||||||||    
T  37972878 cttcttgagattgtttttcttttaaaagttattatctctttcttctc 37972832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 105 - 243
Target Start/End: Original strand, 41827401 - 41827539
Alignment:
Q  105 gaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttga 204  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| || ||||||| |||||||||||||| ||||||||||||||    
T  41827401 gaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatatgagatttcttga 41827500  T
Q  205 gattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  41827501 gattgtttttcttttaaaagttactatctctttcttctc 41827539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 102 - 243
Target Start/End: Original strand, 8675427 - 8675567
Alignment:
Q  102 ttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttct 201  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||| ||||| |||||||||||||||||||    
T  8675427 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttct 8675526  T
Q  202 tgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    ||||||||||||| |||| ||||||||||||| |||||||||    
T  8675527 tgagattgtttttctttt-aaagttactatctatttcttctc 8675567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 97 - 244
Target Start/End: Original strand, 509745 - 509882
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||| ||||||||||||||||||||||||||||||          |||||||||  |||| || |||||||||||||||||||||||||||||    
T  509745 caaatttcgaacgattgtttaataaattggattttgatggat----------tttgtagtgggattttaacaagaaaaagtctttcatgaaaagatgaga 509834  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  509835 tttcttgagattgtttttattttaaaagttactatctttttcttctca 509882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 44122011 - 44121875
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||          |||||||||||| || |||||||||||||| ||||||||||||||    
T  44122011 caaatttcgaaggattgtttaataaattggattttgatggatttt----------gtagtgtaattttaacaagaaaaagtctttaatgaaaagatgaga 44121922  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    ||| |||||||||||||| |||||||||||||||||| |||||||||    
T  44121921 ttttttgagattgtttttcttttaaaagttactatctctttcttctc 44121875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 12740462 - 12740607
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| |||||||||||||||||| |||||||||| |||||| ||||||||| ||||||||||| || |||| |||||||||||| |||||||||||    
T  12740462 caaatttcaaaggattgtttaataaat-ggattttgatagattttgtgggattttatagtgtaattttaacaagagaaagtctttcataaaaagatgaga 12740560  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||| ||||||||||  |||||||||||||| ||| |||||||||    
T  12740561 tttcttaagattgttttacttttaaaagttactgtctctttcttctc 12740607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 97 - 240
Target Start/End: Complemental strand, 44256877 - 44256734
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||| | |||||||| |||||||||| || |||||||||| |||||| |||| ||||||    
T  44256877 caaatttcgaatgattgtttaataaattggatttggatgaattttgttggattttgcagtgtaattttaacaagaaaaagtttttcatcaaaatatgaga 44256778  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttctt 240  Q
    ||| |||||||||||||| |||||||||||| ||||| ||||||    
T  44256777 ttttttgagattgtttttcttttaaaagttattatctctttctt 44256734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 97 - 242
Target Start/End: Complemental strand, 40460818 - 40460683
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||| |||||||||||||||||||||||||||||||||          |||||||||||| || |||||||| ||||||||||||| ||||||    
T  40460818 caaatttcgaatgattgtttaataaattggattttgatggatttt----------gtagtgtaattttaacaagaaaaaatctttcatgaaaatatgaga 40460729  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttct 242  Q
    |||||||||||||||||| |||||||||||||||||| ||| ||||    
T  40460728 tttcttgagattgtttttcttttaaaagttactatctctttgttct 40460683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 973280 - 973397
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  |||||||||||||||||||||| ||||||    
T  973280 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgaga 973379  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  973380 tttcttaggattgttttt 973397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 97 - 226
Target Start/End: Complemental strand, 43187468 - 43187339
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| |||| |||||||||||||||||||||||||| ||||| | ||||||| ||||| ||||| || |||||||||||||||||||| | ||||||    
T  43187468 caaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaattttaacaagaaaaagtctttcatgaagacatgaga 43187369  T
Q  197 tttcttgagattgtttttattttaaaagtt 226  Q
    ||| ||| |||||||||| |||||||||||    
T  43187368 ttttttgggattgtttttcttttaaaagtt 43187339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 47914362 - 47914479
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  47914362 caaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 47914461  T
Q  197 tttcttgagattgttttt 214  Q
    |||||| |||||||||||    
T  47914462 tttcttaagattgttttt 47914479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 29585603 - 29585739
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| ||||||||||||||||| ||||||||||||||||          ||||||||||||||| || ||||||||||||||||| ||||||||| |    
T  29585603 caaattttgaaggattgtttaataatttggattttgatggat----------tttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgaaa 29585692  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| |||||||||||||| | | |||||||||    
T  29585693 tttcttgagattgtttttcttttaaaagttactgtatctttcttctc 29585739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 34695369 - 34695486
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  34695369 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 34695468  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  34695469 tttcttaggattgttttt 34695486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 37328016 - 37328152
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| |||||||||||||||||||| ||||||||||||          |||||||| |||||| || || |||||||||||||||||||||| |||    
T  37328016 caaatttcaaaggattgtttaataaattgaattttgatggat----------tttgtagtataattttaacaaaaaaaagtctttcatgaaaagataaga 37328105  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    ||| |||||||||||||| ||||||||||||||||||  ||||||||    
T  37328106 ttttttgagattgtttttcttttaaaagttactatctccttcttctc 37328152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 39028186 - 39028322
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||| |||| ||||||||||||||||||||||||||||||          |||||||||||| || || |||||||||| |||||||||||   ||||    
T  39028186 caaattacgaaagattgtttaataaattggattttgatggat----------tttgtagtgtaactttaacaagaaaaagtttttcatgaaaaacagaga 39028275  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||    
T  39028276 tttcttgagattgtttttcttttaaaagttactatctctttcttctc 39028322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 46405542 - 46405406
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| || ||||||||||||||||||||||||||||||||| |||          |||||||| || |||||||||| ||| || |||||||||||    
T  46405542 caaatttcaaatgattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtatttaataaaaagatgaga 46405453  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| |||||||||||||||||| ||| |||||    
T  46405452 tttcttgagattgtttttcttttaaaagttactatctcttttttctc 46405406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 7718473 - 7718356
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||| ||||||||||||| ||||||    
T  7718473 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgaga 7718374  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  7718373 tttcttaggattgttttt 7718356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 7719371 - 7719254
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||| |||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  7719371 caaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 7719272  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  7719271 tttcttaggattgttttt 7719254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 30440892 - 30441009
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||| |||||| ||||||    
T  30440892 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagtatgaaaaagtctttcgtgaaaacatgaga 30440991  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  30440992 tttcttaggattgttttt 30441009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 40996760 - 40996643
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| | ||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  40996760 caaatttcgaaggattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 40996661  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  40996660 tttcttaggattgttttt 40996643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 43581201 - 43581096
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  43581201 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 43581102  T
Q  197 tttctt 202  Q
    ||||||    
T  43581101 tttctt 43581096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 44343507 - 44343390
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||| ||||| ||||||    
T  44343507 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcacgaaaacatgaga 44343408  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  44343407 tttcttaggattgttttt 44343390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 12963790 - 12963911
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||| |  ||||||||||||||  |      ||||||    
T  12963790 caaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtaagaaaaagtctttttt-----catgaga 12963884  T
Q  197 tttcttgagattgtttttattttaaaa 223  Q
    |||||||||||||||||| ||||||||    
T  12963885 tttcttgagattgtttttcttttaaaa 12963911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 12893504 - 12893621
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||| ||||||||||||||  |||||||||||||||| || |||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  12893504 caaatttcgaagaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 12893603  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  12893604 tttcttaggattgttttt 12893621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 18914846 - 18914729
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| |||| |||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  18914846 caaatttcaaaggtttgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 18914747  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  18914746 tttcttaggattgttttt 18914729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 32143028 - 32142911
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| |||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||| ||| |||| ||||||    
T  32143028 caaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttccataaaaacatgaga 32142929  T
Q  197 tttcttgagattgttttt 214  Q
    |||||| |||||||||||    
T  32142928 tttcttaagattgttttt 32142911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 47879264 - 47879381
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||  ||||||||||||||||||  |||||||||||||||| ||| ||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  47879264 caaatttaaaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 47879363  T
Q  197 tttcttgagattgttttt 214  Q
    |||||| |||||||||||    
T  47879364 tttcttaagattgttttt 47879381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 10068556 - 10068682
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||| ||||| ||||| |  | |||||||| |||||| |||| ||||||    
T  10068556 caaattttgaaggattgtttaataaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcataaaaacatgaga 10068655  T
Q  197 tttcttgagattgtttttattttaaaa 223  Q
    ||| ||  |||||||||| ||||||||    
T  10068656 tttgttaggattgtttttcttttaaaa 10068682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 20275374 - 20275269
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||| ||||||||  ||||||    
T  20275374 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctgtcatgaaagcatgaga 20275275  T
Q  197 tttctt 202  Q
    ||||||    
T  20275274 tttctt 20275269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 32883871 - 32884002
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| ||               || ||||||||||||    
T  32883871 caaatttcgaatgattgtttattaaattggattttgatggatttcgtgggattttgtagtgtaattttaa---------------caagaaaagatgaga 32883955  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    ||| |||||||||||||| |||||||||||||||| | |||||||||    
T  32883956 tttattgagattgtttttcttttaaaagttactatttgtttcttctc 32884002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 109 - 214
Target Start/End: Complemental strand, 39219476 - 39219371
Alignment:
Q  109 gattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagatt 208  Q
    |||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||| |||| ||||||||||||  ||||    
T  39219476 gattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggatt 39219377  T
Q  209 gttttt 214  Q
    ||||||    
T  39219376 gttttt 39219371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 7113548 - 7113665
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||| |||||||||||||||||  ||||||||| |||||| ||||||||| |||   ||||| |  | |||||||||||||||||||| |||| |    
T  7113548 caaatttcgcaggattgtttaataaatcagattttgatagattttgtgggattttctaggaaaattttagcatgaaaaagtctttcatgaaaacatgaaa 7113647  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  7113648 tttcttaggattgttttt 7113665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 214
Target Start/End: Complemental strand, 17001106 - 17001037
Alignment:
Q  145 ggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 214  Q
    ||||||||||||||||||  || |||||||||||||||||||||| |||||||||||||| |||||||||    
T  17001106 ggattttgtagtgtaattataacaagaaaaagtctttcatgaaaatatgagatttcttgatattgttttt 17001037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 34009109 - 34009226
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||| ||||| || |  ||||| |  |  ||||||||||||| ||||| ||||||    
T  34009109 caaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctaataaaattttagcataaaaaagtctttcaagaaaacatgaga 34009208  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  34009209 tttcttaggattgttttt 34009226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 10676531 - 10676477
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggatttt 151  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  10676531 caaatttcgaaggattgtttaataaattggatttggatggattttatggaatttt 10676477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 43679510 - 43679576
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattt 163  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| |||||    
T  43679510 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattt 43679576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 19251628 - 19251672
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggatttt 141  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  19251628 caaatttcgaaggattgtttaataaattggattttgatggatttt 19251672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 47066821 - 47066881
Alignment:
Q  145 ggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgag 205  Q
    ||||||||||||||||||| || |||||||| | |||||||||||||||||||||||||||    
T  47066821 ggattttgtagtgtaattttaacaagaaaaaatatttcatgaaaagatgagatttcttgag 47066881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 33892321 - 33892212
Alignment:
Q  147 attttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagattt-------------cttgagattgtttttattttaaaagttactatct 233  Q
    ||||||||||||||||| || ||||||||||||||||| ||||||||||||||             ||||||||| ||||| ||||||||||||||||||    
T  33892321 attttgtagtgtaattttaacaagaaaaagtctttcattaaaagatgagattttttaatgagatttcttgagattatttttcttttaaaagttactatct 33892222  T
Q  234 ttttcttctc 243  Q
     |||||||||    
T  33892221 ctttcttctc 33892212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 29893173 - 29893220
Alignment:
Q  196 atttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||    
T  29893173 atttcttgagattgtttttcttttaaaagttactatctctttcttctc 29893220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 25805781 - 25805835
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggatttt 151  Q
    ||||||||| ||||||||||||||||||| ||| ||||||||||| |||||||||    
T  25805781 caaatttcgtaggattgtttaataaattgaattatgatggattttgtgggatttt 25805835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 19810915 - 19810996
Alignment:
Q  134 tggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttta 215  Q
    |||||||| ||| ||||| ||||| ||||| |  |  |||| |||||||||||||| |||||||||||||||||||||||||    
T  19810915 tggattttgtggaattttctagtgaaattttagcataaaaatgtctttcatgaaaacatgagatttcttgagattgttttta 19810996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 31638971 - 31639015
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggatttt 141  Q
    |||||||||||||||||||||||||||  ||||||||||||||||    
T  31638971 caaatttcgaaggattgtttaataaatcagattttgatggatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 132
Target Start/End: Complemental strand, 17001134 - 17001099
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttg 132  Q
    ||||||||||||||||||||||||||||||||||||    
T  17001134 caaatttcgaaggattgtttaataaattggattttg 17001099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 132
Target Start/End: Original strand, 47066793 - 47066828
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttg 132  Q
    ||||||||||||||||||||||||||||||||||||    
T  47066793 caaatttcgaaggattgtttaataaattggattttg 47066828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 447872 - 447913
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggat 138  Q
    ||||||||||| ||||||||||| ||||||||||||||||||    
T  447872 caaatttcgaatgattgtttaattaattggattttgatggat 447913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 214
Target Start/End: Original strand, 9179970 - 9180076
Alignment:
Q  98 aaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagat 197  Q
    ||||| |||||||||||||||||||||||||||||          ||||||||| ||||| | ||| |  |  ||||||||||||||||||| |||||||    
T  9179970 aaattccgaaggattgtttaataaattggattttg----------tgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagat 9180059  T
Q  198 ttcttgagattgttttt 214  Q
    |||||  ||||||||||    
T  9180060 ttcttaggattgttttt 9180076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 136
Target Start/End: Complemental strand, 3797167 - 3797129
Alignment:
Q  98 aaatttcgaaggattgtttaataaattggattttgatgg 136  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  3797167 aaattttgaaggattgtttaataaattagattttgatgg 3797129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 223
Target Start/End: Original strand, 10617024 - 10617134
Alignment:
Q  114 tttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagat-gagatttcttgagattgttt 212  Q
    ||||||||||| |||||||||||||||| || |||||| |||||  |||| |  || || ||||||||||| |||| ||  |||||| ||| ||||| ||    
T  10617024 tttaataaattagattttgatggattttgtgagattttctagtgatattttagtaataacaagtctttcataaaaacataaagattttttgggattgctt 10617123  T
Q  213 ttattttaaaa 223  Q
    || ||||||||    
T  10617124 ttcttttaaaa 10617134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 7e-71; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 97 - 244
Target Start/End: Original strand, 5441498 - 5441645
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  5441498 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 5441597  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5441598 tttcttgagattgtttttattttaaaagttactatctttttcttctca 5441645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 97 - 244
Target Start/End: Original strand, 27768150 - 27768297
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  27768150 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 27768249  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27768250 tttcttgagattgtttttattttaaaagttactatctttttcttctca 27768297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 97 - 244
Target Start/End: Complemental strand, 37828514 - 37828367
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  37828514 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaaaagtctttcatgaaaagatgaga 37828415  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37828414 tttcttgagattgtttttattttaaaaattactatctttttcttctca 37828367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 97 - 242
Target Start/End: Original strand, 54341238 - 54341383
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  54341238 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 54341337  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttct 242  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  54341338 tttcttgagattgtttttattttaaaagttactatttttttcttct 54341383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 97 - 244
Target Start/End: Original strand, 48261221 - 48261368
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||| ||||||||||||| ||||||    
T  48261221 caaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaatatgaga 48261320  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48261321 tttcttgagattgtttttattttaaaagttactatctttttcttctca 48261368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 97 - 241
Target Start/End: Original strand, 51321015 - 51321159
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||| ||||||||||| || |||||||||| ||||||||||||||||||    
T  51321015 caaatttcgaaggattgtttaataaattggattttgatggattttgtgtaattttatagtgtaattttaacaagaaaaagtttttcatgaaaagatgaga 51321114  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttc 241  Q
    |||||||||||||||||| |||||||||||||||||| |||||||    
T  51321115 tttcttgagattgtttttcttttaaaagttactatctctttcttc 51321159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 54853580 - 54853448
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||| ||||||||||||||||||||    
T  54853580 caaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgaga 54853481  T
Q  197 tttcttgagattgtttttattttaaaagttact 229  Q
    |||||||||||||||||| ||||||||||||||    
T  54853480 tttcttgagattgtttttcttttaaaagttact 54853448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 97 - 233
Target Start/End: Original strand, 37915921 - 37916057
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| || ||||||||||| ||||||||||||| |||    
T  37915921 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtacttttaacaagaaaaagtcattcatgaaaagataaga 37916020  T
Q  197 tttcttgagattgtttttattttaaaagttactatct 233  Q
    ||| |||||||||||||| ||||||||||||||||||    
T  37916021 tttattgagattgtttttcttttaaaagttactatct 37916057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 32322185 - 32322331
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| || ||||||| ||||||||| |||||||||||    
T  32322185 caaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaaaagatgaga 32322284  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| |||||| |||||  |||| |||||||||    
T  32322285 tttcttgagattgtttttcttttaatagttatcatctctttcttctc 32322331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 23987308 - 23987444
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||| |||||||||||||          ||||||||||||||| || |||||||||||||||||||||||||||||    
T  23987308 caaatttcgaaggattgtttaataaattagattttgatggat----------tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 23987397  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||    
T  23987398 tttcttgagattgtttttcttttaaaagttactatctctttcttctc 23987444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 41725219 - 41725359
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| ||||||||||||||   |||||||||||||| ||||| ||||||||| ||||||||||| || |||||||| ||||||||||||||||||||    
T  41725219 caaattttgaaggattgtttaa---attggattttgatgaattttgtgggattttatagtgtaattttaacaagaaaaaatctttcatgaaaagatgaga 41725315  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||   ||| |||||||||||||||||||||||||||||||||    
T  41725316 tttcttg---ttggttttattttaaaagttactatctttttcttctc 41725359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 97 - 242
Target Start/End: Complemental strand, 30967411 - 30967276
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| |||||||||||||||||||||||||||          ||||||||||||||||||||| || |||||||| ||||||||||||| || |||    
T  30967411 caaatttcaaaggattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaaaataaga 30967322  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttct 242  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||    
T  30967321 tttcttgagattgttttttttttaaaagttactatctctttcttct 30967276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 115 - 223
Target Start/End: Original strand, 8711978 - 8712086
Alignment:
Q  115 ttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 214  Q
    ||||||||||||||||||||||||||| ||||||||| ||||| ||||| |  ||||||||||||||||| |||| ||||||||||||||||||||||||    
T  8711978 ttaataaattggattttgatggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttcttgagattgttttt 8712077  T
Q  215 attttaaaa 223  Q
     ||||||||    
T  8712078 cttttaaaa 8712086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 49501623 - 49501485
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatg--aaaagatga 194  Q
    ||||||||||| ||||||||||||||||||||||||          ||| ||||||||||||||||| || |||||||||||||||||   |||||||||    
T  49501623 caaatttcgaatgattgtttaataaattggattttg----------tggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatga 49501534  T
Q  195 gatttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  49501533 gatttcttgagattgtttttcttttaaaagttattatctctttcttctc 49501485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 49507688 - 49507550
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatg--aaaagatga 194  Q
    ||||||||||| ||||||||||||||||||||||||          ||| ||||||||||||||||| || |||||||||||||||||   |||||||||    
T  49507688 caaatttcgaatgattgtttaataaattggattttg----------tggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatga 49507599  T
Q  195 gatttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  49507598 gatttcttgagattgtttttcttttaaaagttattatctctttcttctc 49507550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 49834897 - 49834799
Alignment:
Q  145 ggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    ||||||||||||||||||| || ||||| ||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||    
T  49834897 ggattttgtagtgtaattttaacaagaagaagtctttcattaaaagatgagatttcttgagattgtttttctattaaaagttactatctatttcttctc 49834799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 41881194 - 41881077
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  41881194 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 41881095  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  41881094 tttcttaggattgttttt 41881077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 44770965 - 44770821
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| ||||| ||||| ||||||||||||||||||||||  | ||||||    
T  44770965 caaattttgaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaattttaagaagaaaaagtctttcatgacgacatgaga 44770866  T
Q  197 tttcttgagattgtttttattttaaaag-ttactatctttttcttctc 243  Q
    ||||   | |||| |||| ||||||||| ||||||||| |||| ||||    
T  44770865 tttc---atattgcttttcttttaaaagtttactatctctttcctctc 44770821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 145 - 229
Target Start/End: Complemental strand, 32684072 - 32683988
Alignment:
Q  145 ggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttact 229  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  32684072 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttattgagattgtttttcttttaaaagttact 32683988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 97 - 211
Target Start/End: Original strand, 55302937 - 55303051
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  ||||||||||||| || ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  55302937 caaatttcgaaggattgtttaataaatcagattttgatggatattgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 55303036  T
Q  197 tttcttgagattgtt 211  Q
    |||||| ||||||||    
T  55303037 tttcttaagattgtt 55303051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 12113039 - 12113156
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||| ||||||||| ||| ||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  12113039 caaatttcgaaggattgtttaataaatcagattttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 12113138  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||| ||||||||||    
T  12113139 tttcttgggattgttttt 12113156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 25331225 - 25331342
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| ||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  25331225 caaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 25331324  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  25331325 tttcttaggattgttttt 25331342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 98 - 214
Target Start/End: Complemental strand, 34228694 - 34228578
Alignment:
Q  98 aaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagat 197  Q
    |||||||||| |||||||||||||||  |||||||||||||||| | ||||||| ||||| ||||| |  | |||||||||||||||||||| |||||||    
T  34228694 aaatttcgaatgattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagat 34228595  T
Q  198 ttcttgagattgttttt 214  Q
    ||||| |||||||||||    
T  34228594 ttcttaagattgttttt 34228578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 5800072 - 5800208
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| |||||||||||||||||||||||||||          || |||||||||| ||||||| || |||||||||||||| |||||||||| |||    
T  5800072 caaatttcaaaggattgtttaataaattggattttg----------tgagattttgtagagtaattttaacaagaaaaagtctttaatgaaaagataaga 5800161  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    ||| |||||||||||||| |||||||||||| ||||| |||| ||||    
T  5800162 ttttttgagattgtttttcttttaaaagttattatctctttcatctc 5800208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 115 - 214
Target Start/End: Original strand, 24736447 - 24736546
Alignment:
Q  115 ttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 214  Q
    ||||||||||||||||||||||||||| || |||||| ||||| ||||| || ||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  24736447 ttaataaattggattttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttcttgtgattgttttt 24736546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 28483993 - 28484127
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||| |||||||||||||||||||          | ||||||||||||||||||| || |||||||||||||||||||||||| ||||    
T  28483993 caaatttcgaaggattatttaataaattggattttg----------taggattttgtagtgtaattt-aacaagaaaaagtctttcatgaaaagacgaga 28484081  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||| ||||| ||||| |||||||| ||||||||| |||||||||    
T  28484082 tttcttaagattatttttcttttaaaa-ttactatctctttcttctc 28484127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 3436687 - 3436792
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||| ||||| ||||||||||||||| ||||| || | |||||||| ||||||||||| || |||    
T  3436687 caaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttgtagtgaaattttaacatgaaaaagtttttcatgaaaacataaga 3436786  T
Q  197 tttctt 202  Q
    ||||||    
T  3436787 tttctt 3436792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 32950948 - 32950831
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||| ||||| ||||||||| ||||| ||||| |  | |||||| ||||||||||||| ||||||    
T  32950948 caaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgaga 32950849  T
Q  197 tttcttgagattgttttt 214  Q
    |||||| ||||| |||||    
T  32950848 tttcttaagatttttttt 32950831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 39479467 - 39479350
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||| ||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||  ||||||    
T  39479467 caaatttcgaagaattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaggaaaaagtctttcatgaaagcatgaga 39479368  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  39479367 tttcttaggattgttttt 39479350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 41320904 - 41321021
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| |||||| || ||||| ||||| |  | ||||||||||||||| |||| ||||||    
T  41320904 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatgttctagtgaaattttagtatgaaaaagtctttcataaaaacatgaga 41321003  T
Q  197 tttcttgagattgttttt 214  Q
    |||||| |||||| ||||    
T  41321004 tttcttaagattgatttt 41321021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 24131094 - 24130976
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaag-aaaaagtctttcatgaaaagatgag 195  Q
    ||||||||||| |||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| | || | ||||| ||||||||||||| |||||    
T  24131094 caaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatgaaaacatgag 24130995  T
Q  196 atttcttgagattgttttt 214  Q
    |||||||  ||||||||||    
T  24130994 atttcttaggattgttttt 24130976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 37046563 - 37046445
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtg-taatttcaagaagaaaaagtctttcatgaaaagatgag 195  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||| ||||| |||||  ||||| |  | |||||||||||||||||||| |||||    
T  37046563 caaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaaattttagcatgaaaaagtctttcatgaaaatatgag 37046464  T
Q  196 atttcttgagattgttttt 214  Q
    |||||||  ||||||||||    
T  37046463 atttcttaggattgttttt 37046445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 1044905 - 1045006
Alignment:
Q  101 tttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttc 200  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| || |||||||    
T  1044905 tttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttc 1045004  T
Q  201 tt 202  Q
    ||    
T  1045005 tt 1045006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 1112987 - 1113104
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| || |||||||||||||||  |||||||||||||||| ||||||||  ||||  ||||| || | |||||||||||||||||||| ||||||    
T  1112987 caaatttcaaatgattgtttaataaatcagattttgatggattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaacatgaga 1113086  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  1113087 tttcttaggattgttttt 1113104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 7007468 - 7007585
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||| ||||| ||||||||| ||||| ||||| |  | |||||  | ||||||||||| ||||||    
T  7007468 caaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaatttttttcatgaaaacatgaga 7007567  T
Q  197 tttcttgagattgttttt 214  Q
    |||||| |||||||||||    
T  7007568 tttcttaagattgttttt 7007585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 214
Target Start/End: Complemental strand, 30009777 - 30009672
Alignment:
Q  109 gattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagatt 208  Q
    |||||||||||||||  |||||||||||||||| ||||||||| ||||  ||||| |  | |||||||||||||||||||| |||||||||||| |||||    
T  30009777 gattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagatt 30009678  T
Q  209 gttttt 214  Q
    ||||||    
T  30009677 gttttt 30009672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 42786778 - 42786895
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||   ||||||||||||||| ||| ||||| ||||| ||||| |  |  ||||||||||||||||||| ||||||    
T  42786778 caaatttcgaaggattgtttaataaatcatattttgatggattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgaga 42786877  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  42786878 tttcttatgattgttttt 42786895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 19741020 - 19740929
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaa 188  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||| |    |||||||||||||||||||    
T  19741020 caaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcatgaaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 97 - 211
Target Start/End: Original strand, 50018345 - 50018449
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||          ||||||||||||||| || |||||||||||||||| ||||||||||||    
T  50018345 caaattttgaaggattgtttaataaattgaattttaatggat----------tttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgaga 50018434  T
Q  197 tttcttgagattgtt 211  Q
    ||| |||||||||||    
T  50018435 tttattgagattgtt 50018449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 12913318 - 12913455
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| ||||||||||||||||||||||||||||          ||||||||| ||||| ||||| || |||||||||| ||||||||| | ||||||    
T  12913318 caaattttgaaggattgtttaataaattggattttg----------tgggattttctagtgaaattttaacaagaaaaagtatttcatgaagacatgaga 12913407  T
Q  197 tttcttgagattgtttttattttaaaag-ttactatctttttcttctc 243  Q
    |||||||  ||| ||||| ||||||||| ||||||||  |||||||||    
T  12913408 tttcttggaattatttttcttttaaaagtttactatcagtttcttctc 12913455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 22202110 - 22202214
Alignment:
Q  98 aaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagat 197  Q
    ||||||| || |||||||||||||||   ||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| || ||||    
T  22202110 aaatttcaaaagattgtttaataaataaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacattagat 22202209  T
Q  198 ttctt 202  Q
    |||||    
T  22202210 ttctt 22202214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 36479343 - 36479228
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||| ||||||||||||||||||||||||||||           ||||| ||||| |  || ||||||||||| ||||||| ||||||    
T  36479343 caaatttcgaaggattatttaataaattggattttgatggatttt-----------tagtgaaattttagcaaaaaaaagtcttttatgaaaacatgaga 36479255  T
Q  197 tttcttgagattgtttttattttaaaa 223  Q
    |||||||||||| ||||| ||||||||    
T  36479254 tttcttgagattatttttcttttaaaa 36479228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 7249877 - 7249811
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattt 163  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| |||||    
T  7249877 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattt 7249811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 240
Target Start/End: Original strand, 20021427 - 20021570
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaa-gaagaaaaagtctttcatgaaaagatgag 195  Q
    |||||||  ||||||||||||||||||| ||||||| |||||||||||||||||| || || ||||| ||  || ||||| ||||||||||| | || ||    
T  20021427 caaattttaaaggattgtttaataaattagattttgctggattttatgggattttttaatgaaattttaacaaaaaaaaaatctttcatgaagacataag 20021526  T
Q  196 atttcttgagattgtttttattttaaaagttactatctttttctt 240  Q
    ||||| || ||||  ||||  ||| ||||||||||||| ||||||    
T  20021527 atttcatgggattactttt-ctttgaaagttactatctctttctt 20021570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 97 - 180
Target Start/End: Original strand, 25446144 - 25446227
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctt 180  Q
    ||||||||||| |||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||    
T  25446144 caaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 9163170 - 9163236
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattt 163  Q
    ||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||| ||||| |||||    
T  9163170 caaatttcgaaggattgtttaataaattaaattttgatggattttgtggaattttctagtgaaattt 9163236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 25504751 - 25504697
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggatttt 151  Q
    |||||||||||||||||||||||||||  |||||||||||||||| |||||||||    
T  25504751 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatttt 25504697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 46635754 - 46635643
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  ||||      |||||| ||||||||| ||||| ||||| |  | ||||||||||||||| |||| ||||||    
T  46635754 caaatttcgaaggattgtttaataaataagatt------gattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaaacatgaga 46635661  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  46635660 tttcttaggattgttttt 46635643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 56445457 - 56445350
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||| ||||||||||||||||||||||||          ||||||||| ||||| || || |  ||||||||||||||||| || | ||||||    
T  56445457 caaatttcgaatgattgtttaataaattggattttg----------tgggattttctagtgaaactttagcaagaaaaagtctttcataaagacatgaga 56445368  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||||||||||||||    
T  56445367 tttcttgagattgttttt 56445350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 29649779 - 29649735
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggatttt 141  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  29649779 caaatttcgaaagattgtttaataaattggattttgatggatttt 29649735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 23465049 - 23465108
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagt 156  Q
    |||||||||||||||||||||||||||  || ||||||||||||| ||||||||| ||||    
T  23465049 caaatttcgaaggattgtttaataaatcagaatttgatggattttgtgggattttctagt 23465108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 28371018 - 28371093
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaa 172  Q
    |||||||  |||||||||||||||||||| |||||| || ||||| ||||||||| ||||| ||||| ||||||||    
T  28371018 caaattttaaaggattgtttaataaattgaattttggtgaattttgtgggattttctagtgaaattttaagaagaa 28371093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 28541792 - 28541858
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattt 163  Q
    ||||||||||| |||||||||||||||  |||||||||||||||| ||| ||||| ||||| |||||    
T  28541792 caaatttcgaatgattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattt 28541858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 31314844 - 31314737
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||          ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  31314844 caaatttcgaaggattgtttaataaatcagattttg----------tgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 31314755  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  31314754 tttcttaggattgttttt 31314737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 27454190 - 27454073
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| ||| |||| ||||||||||  |||||||||| ||||| ||| ||||| ||||| |||||    | |||||||||||||||||||| || | |    
T  27454190 caaattttgaaagattatttaataaatcagattttgatgaattttgtggaattttctagtgaaattttggcatgaaaaagtctttcatgaaaacataata 27454091  T
Q  197 tttcttgagattgttttt 214  Q
    ||| || |||||||||||    
T  27454090 tttgttaagattgttttt 27454073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 135 - 243
Target Start/End: Complemental strand, 36728023 - 36727916
Alignment:
Q  135 ggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctt 234  Q
    ||||||| | ||||||| ||||| ||||| || |||||||| |||||||||| |  ||||||||| |||||||||||||| |||||||  ||||| ||      
T  36728023 ggattttgtaggattttttagtgaaattttaacaagaaaaaatctttcatgagac-atgagattttttgagattgttttttttttaaagtttactgtcac 36727925  T
Q  235 tttcttctc 243  Q
    |||||||||    
T  36727924 tttcttctc 36727916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 53275933 - 53276025
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaa 189  Q
    |||||||||||||||||| ||||||||  |||||||||||||||| || |||||| || |  ||||| |  | ||||||||||||||| ||||    
T  53275933 caaatttcgaaggattgtgtaataaatcagattttgatggattttgtgagattttctaataaaattttagcatgaaaaagtctttcattaaaa 53276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 132
Target Start/End: Complemental strand, 32684100 - 32684065
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttg 132  Q
    ||||||||||||||||||||||||||||||||||||    
T  32684100 caaatttcgaaggattgtttaataaattggattttg 32684065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 132
Target Start/End: Complemental strand, 49834925 - 49834890
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttg 132  Q
    ||||||||||||||||||||||||||||||||||||    
T  49834925 caaatttcgaaggattgtttaataaattggattttg 49834890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 39307365 - 39307260
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| || |||| |||||| |||||  |||||||| ||||| ||||||||| ||||| ||||| || | |||||||| | | || |||| ||||||    
T  39307365 caaatttctaaagattatttaatgaattgagttttgatgaattttgtgggattttctagtgaaattttaacatgaaaaagtttctgataaaaacatgaga 39307266  T
Q  197 tttctt 202  Q
    ||||||    
T  39307265 tttctt 39307260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 40537261 - 40537218
Alignment:
Q  98 aaatttcgaaggattgtttaataaattggattttgatggatttt 141  Q
    |||||||||| |||||||||||||||  ||||||||||||||||    
T  40537261 aaatttcgaatgattgtttaataaatctgattttgatggatttt 40537218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 40537224 - 40537150
Alignment:
Q  145 ggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttatttt 219  Q
    ||||||||| ||| ||||| |  | |||||||||||||||||||| ||||||||||||  |||| ||||| ||||    
T  40537224 ggattttgtggtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattttttttttttt 40537150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 11090435 - 11090520
Alignment:
Q  134 tggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttatttt 219  Q
    |||||||| ||||||||| ||||| ||||| |  |  ||||||||||| || |||| ||||||||||||  |||||||||| ||||    
T  11090435 tggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattgtttttctttt 11090520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 7e-71; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 97 - 244
Target Start/End: Original strand, 6312662 - 6312809
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  6312662 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 6312761  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6312762 tttcttgagattgtttttattttaaaagttactatctttttcttctca 6312809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 97 - 244
Target Start/End: Original strand, 51701668 - 51701815
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  51701668 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 51701767  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  51701768 ttttttgagattgtttttattttaaaagttactatctttttcttctca 51701815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 97 - 244
Target Start/End: Original strand, 25612245 - 25612392
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || |||||||||||||||||||||||||||||    
T  25612245 caaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaaaagtctttcatgaaaagatgaga 25612344  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25612345 tttcttgagattgtttttattttaaaagttactatctttttcttctca 25612392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 9322612 - 9322466
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  9322612 caaatttagaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 9322513  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  9322512 tttcttgagattgtttttattttaaaatttactatctttttcttctc 9322466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 97 - 239
Target Start/End: Complemental strand, 29396500 - 29396358
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  29396500 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 29396401  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttct 239  Q
    |||||||||||||||||| |||||||||||||||||| |||||    
T  29396400 tttcttgagattgtttttgttttaaaagttactatctctttct 29396358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 97 - 239
Target Start/End: Complemental strand, 15835165 - 15835023
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  15835165 caaattgcaaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 15835066  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttct 239  Q
    |||||||||||||||||| |||||||||||||||||| |||||    
T  15835065 tttcttgagattgtttttgttttaaaagttactatctctttct 15835023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 28387505 - 28387359
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || || |||||||||||||| |||||||||||    
T  28387505 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtctttcataaaaagatgaga 28387406  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| |||||||||||| ||||| |||||||||    
T  28387405 tttcttgagattgtttttgttttaaaagttattatctctttcttctc 28387359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 48177574 - 48177442
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  48177574 caaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 48177475  T
Q  197 tttcttgagattgtttttattttaaaagttact 229  Q
    |||||||||||||||||| ||||||||| ||||    
T  48177474 tttcttgagattgtttttcttttaaaagatact 48177442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 46328130 - 46328276
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||| ||||||| |||    
T  46328130 caaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagataaga 46328229  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    ||||| || ||||||||| |||||||||||||||||| |||||||||    
T  46328230 tttctcgaaattgtttttcttttaaaagttactatctctttcttctc 46328276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 38536201 - 38536065
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| ||||||||||||||||||||||||||||||||||||          |||||||||||| || |||||||||||||||||||||||||||||    
T  38536201 caaatttcaaaggattgtttaataaattggattttgatggatttt----------gtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 38536112  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| ||||||||||||| |||| | |||||||    
T  38536111 tttcttgagattgtttttcttttaaaagttacaatctctctcttctc 38536065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 38558419 - 38558283
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| ||||||||||||||||||||||||||||||||||||          |||||||||||| || |||||||||||||||||||||||||||||    
T  38558419 caaatttcaaaggattgtttaataaattggattttgatggatttt----------gtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 38558330  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| ||||||||||||| |||| | |||||||    
T  38558329 tttcttgagattgtttttcttttaaaagttacaatctctctcttctc 38558283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 9577544 - 9577418
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| || |||||| ||||| ||||| |  | |||||| ||||||||||||| ||||||    
T  9577544 caaatttagaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaaaaatctttcatgaaaacatgaga 9577445  T
Q  197 tttcttgagattgtttttattttaaaa 223  Q
    ||||||| |||||||||| ||||||||    
T  9577444 tttcttgggattgtttttcttttaaaa 9577418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 35279761 - 35279865
Alignment:
Q  98 aaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagat 197  Q
    ||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| |||||||| | |||||||||||||||||||| |||||||    
T  35279761 aaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaaacatgagat 35279860  T
Q  198 ttctt 202  Q
    |||||    
T  35279861 ttctt 35279865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 105 - 226
Target Start/End: Original strand, 29219382 - 29219493
Alignment:
Q  105 gaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttga 204  Q
    ||||||||||||||||||||||||||||||||||          ||||||||||||||| || |||||||||| ||||||||||||||||||||||||||    
T  29219382 gaaggattgtttaataaattggattttgatggat----------tttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcttga 29219471  T
Q  205 gattgtttttattttaaaagtt 226  Q
    |||||||||| |||||||||||    
T  29219472 gattgtttttcttttaaaagtt 29219493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 18798607 - 18798691
Alignment:
Q  145 ggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttact 229  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  18798607 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctagagattgtttttgttttaaaagttact 18798691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 212
Target Start/End: Complemental strand, 35679240 - 35679125
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||||||||| ||||| ||||| |  | |||||||||||||||||| | ||||||    
T  35679240 caaatttcgaaggattgtttaataaatcagattttgatggatttgatgggattttctagtgaaattttagcatgaaaaagtctttcatgaagacatgaga 35679141  T
Q  197 tttcttgagattgttt 212  Q
    |||||| |||||||||    
T  35679140 tttcttaagattgttt 35679125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 97 - 211
Target Start/End: Original strand, 21222235 - 21222349
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  21222235 caaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 21222334  T
Q  197 tttcttgagattgtt 211  Q
    ||||||  |||||||    
T  21222335 tttcttaggattgtt 21222349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 6304364 - 6304247
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| |||| |    
T  6304364 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaa 6304265  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  6304264 tttcttatgattgttttt 6304247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 19451920 - 19451803
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||| |||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  19451920 caaatttcgaaggatcgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 19451821  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  19451820 tttcttatgattgttttt 19451803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 134 - 243
Target Start/End: Original strand, 45272700 - 45272809
Alignment:
Q  134 tggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 233  Q
    |||||||| || |||||||||||||||||| || |||||||| ||||| || |||||||||||||| |||||||||||||| |||||||||||| |||||    
T  45272700 tggattttgtgagattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagattttttgagattgtttttcttttaaaagttattatct 45272799  T
Q  234 ttttcttctc 243  Q
     |||||||||    
T  45272800 gtttcttctc 45272809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 49198381 - 49198264
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| |||| |    
T  49198381 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgata 49198282  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  49198281 tttcttaggattgttttt 49198264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 98 - 202
Target Start/End: Complemental strand, 31572308 - 31572204
Alignment:
Q  98 aaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagat 197  Q
    ||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| | || |||||||||||||||||||  |||||||    
T  31572308 aaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaagtctttcatgaaatcatgagat 31572209  T
Q  198 ttctt 202  Q
    |||||    
T  31572208 ttctt 31572204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 47780808 - 47780916
Alignment:
Q  106 aaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgag 205  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| || | |||||||| ||||||||||| |||||||||||| ||    
T  47780808 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacatgagatttcttaag 47780907  T
Q  206 attgttttt 214  Q
    |||||||||    
T  47780908 attgttttt 47780916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 97 - 224
Target Start/End: Complemental strand, 48668887 - 48668770
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||| ||||||||||||||||||||||||          ||||||| ||||||||||||| || |||||||||||||||||||||||||||||    
T  48668887 caaatttcgaaagattgtttaataaattggattttg----------tgggattctgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 48668798  T
Q  197 tttcttgagattgtttttattttaaaag 224  Q
    ||| ||| |||||||||| |||||||||    
T  48668797 tttgttgggattgtttttcttttaaaag 48668770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 50192662 - 50192545
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| |||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  50192662 caaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 50192563  T
Q  197 tttcttgagattgttttt 214  Q
    ||| ||  ||||||||||    
T  50192562 ttttttaggattgttttt 50192545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 45760121 - 45760004
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||| ||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||| ||| ||||||| ||||||    
T  45760121 caaacttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttgatgaaaacatgaga 45760022  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  45760021 tttcttaggattgttttt 45760004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 47654463 - 47654346
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||| ||||| ||| | ||||| |  | |||||||| ||||||||||| ||||||    
T  47654463 caaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagggaaattttagcatgaaaaagtatttcatgaaaacatgaga 47654364  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  47654363 tttcttaggattgttttt 47654346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 29556192 - 29556310
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaa-agatgag 195  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||| || || ||||| |    |||||||||||| |||||| | |||||    
T  29556192 caaatttcgaaagattgtttaataaattagattttgatggattttatgggattttctaatgaaattttagcttgaaaaagtcttttatgaaacacatgag 29556291  T
Q  196 atttcttgagattgttttt 214  Q
    |||||||  ||||||||||    
T  29556292 atttcttaggattgttttt 29556310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 97 - 199
Target Start/End: Complemental strand, 32589065 - 32588963
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| || |||||| ||||| ||||| |  |  ||||||||||||||||||| ||||||    
T  32589065 caaattttgaaggattgtttaataaatcggattttgatggattttgtgagattttctagtgaaattttagcataaaaaagtctttcatgaaaacatgaga 32588966  T
Q  197 ttt 199  Q
    |||    
T  32588965 ttt 32588963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 28824484 - 28824368
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||| ||||||||||||||  |||||||||||||||| ||||||||| ||| | ||||| || | |||||||||||| || |||| ||||||    
T  28824484 caaatttcgaag-attgtttaataaatcagattttgatggattttgtgggattttctagggaaattttaacatgaaaaagtcttttataaaaacatgaga 28824386  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  28824385 tttcttaggattgttttt 28824368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 37014752 - 37014635
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| || |||||||| |||||||| ||||||||||||||| | ||||||| ||||| ||||| |  | |||||||||| |||| |||| ||||||    
T  37014752 caaatttctaaagattgttttataaattgaattttgatggattttgtcggattttctagtgaaattttagcatgaaaaagtctctcataaaaacatgaga 37014653  T
Q  197 tttcttgagattgttttt 214  Q
    |||||| |||||||||||    
T  37014652 tttcttaagattgttttt 37014635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 49418172 - 49418277
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| ||||||||||||||||||  |||||||||||||||| ||||||||| || || ||||| |  | |||||| ||||||||||||| ||||||    
T  49418172 caaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctattgaaattttagcatgaaaaaatctttcatgaaaatatgaga 49418271  T
Q  197 tttctt 202  Q
    ||||||    
T  49418272 tttctt 49418277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 45536032 - 45536124
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaa 189  Q
    ||||||||||| |||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||||    
T  45536032 caaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 45536124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 5495181 - 5495117
Alignment:
Q  134 tggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatt 198  Q
    |||||||| ||||||||||||||||||||| || ||||||||||| || ||||||||||||||||    
T  5495181 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtcctttatgaaaagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 180
Target Start/End: Original strand, 48524407 - 48524490
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctt 180  Q
    ||||||| ||| |||||||||||||||  | |||||||||||||| ||||||||| ||||| ||||| || | |||||||||||    
T  48524407 caaattttgaaagattgtttaataaatcagtttttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 132
Target Start/End: Original strand, 18798579 - 18798614
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttg 132  Q
    ||||||||||||||||||||||||||||||||||||    
T  18798579 caaatttcgaaggattgtttaataaattggattttg 18798614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 730237 - 730303
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattt 163  Q
    |||||||||| | ||||||||||||||  |||||||||||||||| || |||||| ||||| |||||    
T  730237 caaatttcgacgaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattt 730303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 955838 - 955882
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggatttt 141  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||    
T  955838 caaatttcgaagggttgtttaataaatcagattttgatggatttt 955882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 43885202 - 43885158
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggatttt 141  Q
    ||||||| ||| |||| ||||||||||||||||||||||||||||    
T  43885202 caaattttgaatgattatttaataaattggattttgatggatttt 43885158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 131
Target Start/End: Original strand, 49230974 - 49231008
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggatttt 131  Q
    |||||||||||||||| ||||||||||||||||||    
T  49230974 caaatttcgaaggattatttaataaattggatttt 49231008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 51085883 - 51085937
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggatttt 151  Q
    ||||||| |||||||| || ||||||||||||||||||| ||||| ||| |||||    
T  51085883 caaattttgaaggattattaaataaattggattttgatgaattttgtggaatttt 51085937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 33025664 - 33025696
Alignment:
Q  170 gaaaaagtctttcatgaaaagatgagatttctt 202  Q
    |||||||||||||||||||| ||||||||||||    
T  33025664 gaaaaagtctttcatgaaaacatgagatttctt 33025696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 132; Significance: 2e-68; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 97 - 244
Target Start/End: Complemental strand, 14782246 - 14782099
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  14782246 caaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 14782147  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14782146 tttcttgagattgtttttattttaaaagttactatctttttcttctca 14782099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 97 - 244
Target Start/End: Complemental strand, 44725921 - 44725774
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  44725921 caaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 44725822  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44725821 tttcttgagattgtttttattttaaaagttactatctttttcttctca 44725774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 39467579 - 39467433
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||    
T  39467579 caaatttcgaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgaga 39467480  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    ||| |||||||||||||| |||||||||||||||||| |||||||||    
T  39467479 ttttttgagattgtttttcttttaaaagttactatctctttcttctc 39467433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 9288568 - 9288436
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  9288568 caaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 9288469  T
Q  197 tttcttgagattgtttttattttaaaagttact 229  Q
    |||||||||||||||||| ||||||||||||||    
T  9288468 tttcttgagattgtttttcttttaaaagttact 9288436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 43166801 - 43166655
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| || |||||||||| ||||||||||||||||||    
T  43166801 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaaaagatgaga 43166702  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    ||||||||||||| |||| |||||||||||||||||| |||| ||||    
T  43166701 tttcttgagattggttttcttttaaaagttactatctctttcctctc 43166655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 97 - 233
Target Start/End: Complemental strand, 19717992 - 19717856
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||| || |||||||||||||| ||||||||||||||    
T  19717992 caaatttcgaagaattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgaga 19717893  T
Q  197 tttcttgagattgtttttattttaaaagttactatct 233  Q
    |||||||||||||||||| ||||||||||||||||||    
T  19717892 tttcttgagattgtttttgttttaaaagttactatct 19717856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 26856162 - 26856308
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||  |||| || |||    
T  26856162 caaatttcgaagtattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcagaaaaaaataaga 26856261  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||    
T  26856262 tttcttgagattgtttttcttttaaaagttactatctctttcttctc 26856308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 18958838 - 18958706
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||| |||    
T  18958838 caaatttcgaaggattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagattaga 18958739  T
Q  197 tttcttgagattgtttttattttaaaagttact 229  Q
    ||| |||||||||||||| ||||||||||||||    
T  18958738 ttttttgagattgtttttgttttaaaagttact 18958706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 97 - 229
Target Start/End: Original strand, 4403202 - 4403334
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||| || |||||||||||||||||||||| ||||||    
T  4403202 caaatttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtctttcatgaaaatatgaga 4403301  T
Q  197 tttcttgagattgtttttattttaaaagttact 229  Q
    ||||||| |||||||||| ||||||||||||||    
T  4403302 tttcttgggattgtttttcttttaaaagttact 4403334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 97 - 227
Target Start/End: Complemental strand, 10295492 - 10295360
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggatttta-tgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgag 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  10295492 caaatttcgaaggattgtttaataaattggattttgatggatttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 10295393  T
Q  196 atttcttgagattgt-ttttattttaaaagtta 227  Q
    ||||||||||||||| |||| ||||||||||||    
T  10295392 atttcttgagattgtttttttttttaaaagtta 10295360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 97 - 244
Target Start/End: Complemental strand, 18306072 - 18305935
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||| ||||||||||||||||||||||||          ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  18306072 caaatttcgaaagattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 18305983  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    ||||||||||||||| || |||||||||||||||||| ||||||||||    
T  18305982 tttcttgagattgttattcttttaaaagttactatctctttcttctca 18305935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 134 - 243
Target Start/End: Original strand, 7466457 - 7466566
Alignment:
Q  134 tggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 233  Q
    |||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  7466457 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttacgatct 7466556  T
Q  234 ttttcttctc 243  Q
     |||||||||    
T  7466557 ctttcttctc 7466566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 97 - 231
Target Start/End: Original strand, 32497620 - 32497744
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||| ||||||||||||||||||||||||          ||||||||||||||||||||| || |||| ||||||||||||||||||||||||    
T  32497620 caaatttcgaatgattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagagaaagtctttcatgaaaagatgaga 32497709  T
Q  197 tttcttgagattgtttttattttaaaagttactat 231  Q
    |||||||||||||||||| ||||||||||||||||    
T  32497710 tttcttgagattgtttttcttttaaaagttactat 32497744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 97 - 229
Target Start/End: Original strand, 37857214 - 37857336
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||  |||||||||||||||||||||||||||||||||          ||||||||||||||| || |||||||| ||||||||||||||||||||    
T  37857214 caaattttaaaggattgtttaataaattggattttgatggat----------tttgtagtgtaatttgaacaagaaaaaatctttcatgaaaagatgaga 37857303  T
Q  197 tttcttgagattgtttttattttaaaagttact 229  Q
    |||||||||||||||||| ||||||||||||||    
T  37857304 tttcttgagattgtttttcttttaaaagttact 37857336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 227
Target Start/End: Original strand, 16362291 - 16362411
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||| || |||||||| ||||| || |||||||||||    
T  16362291 caaatttcgaaggattgtttaataaattggattttgatggat----------tttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgaga 16362380  T
Q  197 tttcttgagattgtttttattttaaaagtta 227  Q
    |||||||||||||||||| ||||||||||||    
T  16362381 tttcttgagattgtttttcttttaaaagtta 16362411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 24501924 - 24501807
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  24501924 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 24501825  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  24501824 tttcttaggattgttttt 24501807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 26374541 - 26374424
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  26374541 caaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 26374442  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  26374441 tttcttaggattgttttt 26374424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 42305896 - 42305774
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||          |||||||||||| || ||||||||||| |||||||||| ||||||    
T  42305896 caaatttcgaaggattgtttaatcaattggattttaatggatttt----------gtagtgtaattttaacaagaaaaagtcattcatgaaaaaatgaga 42305807  T
Q  197 tttcttgagattgtttttattttaaaagttact 229  Q
    |||||||||||||||||| |||| |||||||||    
T  42305806 tttcttgagattgtttttgtttttaaagttact 42305774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 42937446 - 42937563
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  |  ||||||||||||||||||| ||||||    
T  42937446 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcattaaaaagtctttcatgaaaacatgaga 42937545  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  42937546 tttcttatgattgttttt 42937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 42938228 - 42938111
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |    |||||||||||||||||||| ||||||    
T  42938228 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcctgaaaaagtctttcatgaaaacatgaga 42938129  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  42938128 tttcttaggattgttttt 42938111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 31623818 - 31623900
Alignment:
Q  145 ggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 227  Q
    ||||||||||||||||||| || |||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  31623818 ggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagataagatttcttgagattgtttttcttttaaaagtta 31623900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 7507010 - 7506893
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| |||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||| ||| ||||||    
T  7507010 caaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaacatgaga 7506911  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  7506910 tttcttaggattgttttt 7506893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 226
Target Start/End: Complemental strand, 39189925 - 39189798
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||   | ||||| ||||  ||||| || |||||||| ||||||||||||| ||||||    
T  39189925 caaatttcgaaggattgtttaataaattgaattt-gatggattttgatgaattttctagta-aattttaacaagaaaaaatctttcatgaaaacatgaga 39189828  T
Q  197 tttcttgagattgtttttattttaaaagtt 226  Q
    ||||||| |||||||||| |||||||||||    
T  39189827 tttcttgggattgtttttcttttaaaagtt 39189798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 97 - 199
Target Start/End: Complemental strand, 10392348 - 10392246
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||| ||||||||||||| ||||||    
T  10392348 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgaga 10392249  T
Q  197 ttt 199  Q
    |||    
T  10392248 ttt 10392246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 2704930 - 2704813
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||| |||||||||||||||   ||||||||||||||| ||||||||| |||||  |||| |  | |||||||||||||||||||| ||||||    
T  2704930 caaatttcgaatgattgtttaataaatcaaattttgatggattttgtgggattttctagtgatattttagcatgaaaaagtctttcatgaaaacatgaga 2704831  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  2704830 tttcttaggattgttttt 2704813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 5576731 - 5576614
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||| |||||||||||||   |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||| ||||||| ||||||    
T  5576731 caaatttcgaagaattgtttaataaaccagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgaga 5576632  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  5576631 tttcttaggattgttttt 5576614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 42735388 - 42735271
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||| ||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |    ||||||||||||||| |||| ||||||    
T  42735388 caaatttcgaagtattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcataaaaacatgaga 42735289  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  42735288 tttcttaggattgttttt 42735271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 23115280 - 23115163
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| |||||||||||||||||||  |||||||||||||||| ||||||||| || || |||||    | |||||||||||||||||||| ||||||    
T  23115280 caaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttggcatgaaaaagtctttcatgaaaacatgaga 23115181  T
Q  197 tttcttgagattgttttt 214  Q
    || |||  ||||||||||    
T  23115180 ttccttaggattgttttt 23115163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 4031341 - 4031294
Alignment:
Q  145 ggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagat 192  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||    
T  4031341 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 4031294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 8410508 - 8410455
Alignment:
Q  98 aaatttcgaaggattgtttaataaattggattttgatggattttatgggatttt 151  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  8410508 aaatttggaaggattgtttactaaattggactttgatggattttgtgggatttt 8410455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 132
Target Start/End: Complemental strand, 4031369 - 4031334
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttg 132  Q
    ||||||||||||||||||||||||||||||||||||    
T  4031369 caaatttcgaaggattgtttaataaattggattttg 4031334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 132
Target Start/End: Original strand, 31623790 - 31623825
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttg 132  Q
    ||||||||||||||||||||||||||||||||||||    
T  31623790 caaatttcgaaggattgtttaataaattggattttg 31623825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 109 - 214
Target Start/End: Complemental strand, 4950115 - 4950010
Alignment:
Q  109 gattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagatt 208  Q
    |||| ||||||||||| |||||||||||| ||| ||| ||||| ||||| ||||| |  | |||||| | ||||||| ||| || ||||||||| | |||    
T  4950115 gattatttaataaattagattttgatggaatttgtggaattttctagtgaaattttagcatgaaaaaatatttcatgcaaacataagatttcttaaaatt 4950016  T
Q  209 gttttt 214  Q
    ||||||    
T  4950015 gttttt 4950010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 13478360 - 13478307
Alignment:
Q  98 aaatttcgaaggattgtttaataaattggattttgatggattttatgggatttt 151  Q
    ||||||||||||||||||||||||||| ||||| | |||||||| | |||||||    
T  13478360 aaatttcgaaggattgtttaataaattagatttcgttggattttgtaggatttt 13478307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 43959752 - 43959796
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggatttt 141  Q
    ||||||||||| |||||||||||||||  ||||||||||||||||    
T  43959752 caaatttcgaatgattgtttaataaatcagattttgatggatttt 43959796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 41479221 - 41479299
Alignment:
Q  136 gattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 214  Q
    |||||| ||||||||| ||||  ||||| |  | |||||| ||||||||||||| ||||||||||||  ||||||||||    
T  41479221 gattttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattgttttt 41479299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 132; Significance: 2e-68; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 97 - 244
Target Start/End: Original strand, 31895790 - 31895937
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  31895790 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 31895889  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31895890 tttcttgagattgtttttattttaaaagttactatctttttcttctca 31895937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 98 - 229
Target Start/End: Complemental strand, 14262543 - 14262412
Alignment:
Q  98 aaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagat 197  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||| |||    
T  14262543 aaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgggat 14262444  T
Q  198 ttcttgagattgtttttattttaaaagttact 229  Q
    ||||||||||||||||| ||||||||||||||    
T  14262443 ttcttgagattgtttttcttttaaaagttact 14262412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 97 - 233
Target Start/End: Complemental strand, 34759161 - 34759025
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||| ||||||||||||||||||||    
T  34759161 caaatttccaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgaga 34759062  T
Q  197 tttcttgagattgtttttattttaaaagttactatct 233  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  34759061 tttcttgagattatttttcttttaaaagttactatct 34759025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 7497170 - 7497315
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||| || |||||||||||||||||||||||||||||    
T  7497170 caaatttcgaaggagtgtttaataaattggattttgatggattttgtgg-attttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 7497268  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||| ||||| |||||||||||||||||| ||| |||||    
T  7497269 tttcttgagattatttttcttttaaaagttactatctctttattctc 7497315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 97 - 244
Target Start/End: Complemental strand, 4200538 - 4200401
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||          |||||||||||| || |||||||||||||||||||||||||||||    
T  4200538 caaatttcgaaggattgtttaataaattggattttgatggatttt----------gtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 4200449  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4200448 tttcttgagattgtttttattttaaaagttactatctttttcttctca 4200401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 97 - 241
Target Start/End: Original strand, 31067587 - 31067721
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||| || ||||||||||||||||| |||||||||||    
T  31067587 caaatttcgaaggattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgaga 31067676  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttc 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  31067677 tttcttgagattgtttttattttaaaagttactatctttttcttc 31067721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 97 - 244
Target Start/End: Original strand, 34773503 - 34773639
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| || |||||||||||||||||||||||||||||    
T  34773503 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 34773602  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    ||||           |||||||||||||||||||||||||||||||||    
T  34773603 tttc-----------tttattttaaaagttactatctttttcttctca 34773639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 30385168 - 30385034
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||| || || |||  |||||||||||||||||||||    
T  30385168 caaatttcgaaggattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaacaaa--gtctttcatgaaaagatgaga 30385081  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| |||||||| ||||||||| |||||||||    
T  30385080 tttcttgagattgtttttcttttaaaaattactatctctttcttctc 30385034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 6197589 - 6197472
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  6197589 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 6197490  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  6197489 tttcttaggattgttttt 6197472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 2300849 - 2300744
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  2300849 caaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 2300750  T
Q  197 tttctt 202  Q
    ||||||    
T  2300749 tttctt 2300744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 1391718 - 1391835
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| |||||||||||||||||||  |||||||||||||||| ||||||||| ||||| |||||    | |||||||||||||||||||| ||||||    
T  1391718 caaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgaga 1391817  T
Q  197 tttcttgagattgttttt 214  Q
    || |||  ||||||||||    
T  1391818 ttccttaggattgttttt 1391835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 29076693 - 29076810
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| ||||||| ||||| ||||| |  | |||||| |||||||| |||| ||||||    
T  29076693 caaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaaaacatgaga 29076792  T
Q  197 tttcttgagattgttttt 214  Q
    ||| ||  ||||||||||    
T  29076793 ttttttaggattgttttt 29076810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 29111667 - 29111784
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| ||||||| ||||| ||||| |  | |||||| |||||||| |||| ||||||    
T  29111667 caaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaaaacatgaga 29111766  T
Q  197 tttcttgagattgttttt 214  Q
    ||| ||  ||||||||||    
T  29111767 ttttttaggattgttttt 29111784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 7051939 - 7052044
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||  ||||| |  | |||||||| |||||| |||  ||||||    
T  7051939 caaatttcgaaggattgtttaataaattggattttgatggattttgtaggattttctagtaaaattttagcatgaaaaagtttttcataaaatcatgaga 7052038  T
Q  197 tttctt 202  Q
    ||||||    
T  7052039 tttctt 7052044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 28002759 - 28002856
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatga 194  Q
    ||||||| |||||||||||||||||||  |||||||||||||||| ||  ||||| ||||| ||||| |  | |||||||||||||||||||| ||||    
T  28002759 caaatttggaaggattgtttaataaatcagattttgatggattttgtgaaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 28002856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 2238678 - 2238722
Alignment:
Q  170 gaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 214  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||    
T  2238678 gaaaaaatctttcatgaaaacatgagatttcttaagattgttttt 2238722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 2e-68; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 97 - 244
Target Start/End: Complemental strand, 14000216 - 14000069
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  14000216 caaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 14000117  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14000116 tttcttgagattgtttttattttaaaagttactatctttttcttctca 14000069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 97 - 239
Target Start/End: Original strand, 39852440 - 39852582
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  39852440 caaatttcgaaggattgtttactaaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 39852539  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttct 239  Q
    |||||||||||||||||| |||||||||||||||||| |||||    
T  39852540 tttcttgagattgtttttgttttaaaagttactatctctttct 39852582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 1152214 - 1152068
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||| ||||||||||||||    
T  1152214 caaatttcgagggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgaga 1152115  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||| ||||||||||| |||||||||||||||||| |||||||||    
T  1152114 tttcttaagattgtttttcttttaaaagttactatctctttcttctc 1152068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 13926026 - 13926172
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||| |||||||||| |    
T  13926026 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgata 13926125  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| || ||||||||||||||| |||||||||    
T  13926126 tttcttgagattgtttttcttctaaaagttactatctctttcttctc 13926172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 7947684 - 7947538
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| || |||||||||||||||||||||||| ||||    
T  7947684 caaatttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagaagaga 7947585  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||| ||||||||| |||||||||||| ||||| |||||||||    
T  7947584 tttcttgaaattgtttttcttttaaaagttaatatctctttcttctc 7947538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 97 - 219
Target Start/End: Complemental strand, 4550368 - 4550246
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| || |||||| ||||||||||||||||||||||    
T  4550368 caaatttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaagagtctttcatgaaaagatgaga 4550269  T
Q  197 tttcttgagattgtttttatttt 219  Q
    ||| |||||||||||||| ||||    
T  4550268 tttgttgagattgtttttttttt 4550246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 97 - 237
Target Start/End: Complemental strand, 4240563 - 4240433
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||          |||||||||||| || |||||||||||||||||||| ||||||||    
T  4240563 caaatttcgaaggattgtttaataaattggattttgatggatttt----------gtagtgtaattttaacaagaaaaagtctttcatgaatagatgaga 4240474  T
Q  197 tttcttgagattgtttttattttaaaagttactatcttttt 237  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  4240473 tttcttgagattgtttttcttttaaaagttactatcttttt 4240433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 5949203 - 5949339
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||| || |||||||||||||||||||||||||||||    
T  5949203 caaatttcgaaggattgtttaataaattggattttgatggat----------tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 5949292  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| |||||||||||| ||||| ||| |||||    
T  5949293 tttcttgagattgtttttcttttaaaagttattatctctttattctc 5949339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 1461249 - 1461113
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||          ||| |||||||| || |||||||| ||||||||||||||||||||    
T  1461249 caaatttcgaaggattgtttaataaattggattttgatggatttt----------gtactgtaattttaacaagaaaaaatctttcatgaaaagatgaga 1461160  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||    
T  1461159 tttcttgagattgtttttcttttaaaagttactatatctttcttctc 1461113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 97 - 233
Target Start/End: Complemental strand, 40013813 - 40013687
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||          |||||||||||| || |||||||||||||||||||||||||||||    
T  40013813 caaatttcgaaggattgtttaatcaattggattttaatggatttt----------gtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 40013724  T
Q  197 tttcttgagattgtttttattttaaaagttactatct 233  Q
    |||||||||||||||||| |||| |||||||||||||    
T  40013723 tttcttgagattgtttttgtttttaaagttactatct 40013687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 21147162 - 21147279
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  21147162 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 21147261  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  21147262 tttcttaggattgttttt 21147279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 33656152 - 33656035
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  33656152 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaatatgaga 33656053  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  33656052 tttcttaggattgttttt 33656035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 145 - 232
Target Start/End: Original strand, 37014037 - 37014124
Alignment:
Q  145 ggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatc 232  Q
    |||||||||||| |||||| || ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  37014037 ggattttgtagtataattttaacaagaaaaagtctttcataaaaagatgagatttcttgagattgtttttcttttaaaagttactatc 37014124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 7016850 - 7016745
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||| |||| ||||||    
T  7016850 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgaga 7016751  T
Q  197 tttctt 202  Q
    ||||||    
T  7016750 tttctt 7016745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 5273030 - 5272925
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||| |||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||| |||| ||||||    
T  5273030 caaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgaga 5272931  T
Q  197 tttctt 202  Q
    ||||||    
T  5272930 tttctt 5272925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 22746392 - 22746501
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||| |||||        |||||||| || |||||||| |||||||||||||||| |||    
T  22746392 caaatttcgaatgattgtttaataaattgaattttgatggattttgtggga--------tgtaattttaacaagaaaaactctttcatgaaaagataaga 22746483  T
Q  197 tttcttgagattgttttt 214  Q
    |||||| |||||||||||    
T  22746484 tttcttaagattgttttt 22746501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 211
Target Start/End: Complemental strand, 32158008 - 32157891
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattt---caagaagaaaaagtctttcatgaaaagatg 193  Q
    |||||||||||||||||||||||||||| |||||||| ||||||| ||||||||| ||||  |||||   || ||| ||| ||||||||||||||| |||    
T  32158008 caaatttcgaaggattgtttaataaattagattttgacggattttgtgggattttctagtaaaattttagcacgaaaaaatagtctttcatgaaaacatg 32157909  T
Q  194 agatttcttgagattgtt 211  Q
    ||||||||| | ||||||    
T  32157908 agatttcttaaaattgtt 32157891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 100 - 214
Target Start/End: Complemental strand, 27459058 - 27458944
Alignment:
Q  100 atttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagattt 199  Q
    |||| |||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||| |  | |||||| || |||||||||| |||| ||||    
T  27459058 attttgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatcattcatgaaaacatgatattt 27458959  T
Q  200 cttgagattgttttt 214  Q
    |||  ||||||||||    
T  27458958 cttaggattgttttt 27458944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 139368 - 139473
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||   |||||||||||||||| | |||||||  |||| ||||| || | ||||||||||||||| |||| ||||||    
T  139368 caaatttcgaaggattgtttaataaaccagattttgatggattttgttggattttccagtgaaattttaatatgaaaaagtctttcataaaaacatgaga 139467  T
Q  197 tttctt 202  Q
    ||||||    
T  139468 tttctt 139473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 849242 - 849334
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaa 189  Q
    |||||||||||||||||||||||||||  ||||||||| |||||| ||||||||| ||||| ||||| |  | ||||||||||||||||||||    
T  849242 caaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 849334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 214
Target Start/End: Original strand, 9689753 - 9689869
Alignment:
Q  98 aaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagat 197  Q
    |||||||||| |||||||| ||||||| |||||||||||||| | || |||||| | ||  ||||| |  | ||||||||||||||| |||| || ||||    
T  9689753 aaatttcgaatgattgtttgataaattagattttgatggattgtgtgagattttcttgtaaaattttattatgaaaaagtctttcataaaaacataagat 9689852  T
Q  198 ttcttgagattgttttt 214  Q
    |||||  ||||||||||    
T  9689853 ttcttatgattgttttt 9689869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 6460887 - 6460953
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattt 163  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||  |||||||| ||||| |||||    
T  6460887 caaatttcgaaggtttgtttaataaatcagattttgatggattttgagggattttctagtgaaattt 6460953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 14465338 - 14465279
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagt 156  Q
    ||||||||||| ||||||||||||||| ||||||||||| ||||| ||| ||||| ||||    
T  14465338 caaatttcgaaagattgtttaataaatcggattttgatgaattttgtggaattttctagt 14465279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 132; Significance: 2e-68; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 97 - 244
Target Start/End: Complemental strand, 36674242 - 36674095
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  36674242 caaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 36674143  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36674142 tttcttgagattgtttttattttaaaagttactatctttttcttctca 36674095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 97 - 242
Target Start/End: Original strand, 32580270 - 32580415
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  32580270 caaatttcgaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 32580369  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttct 242  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  32580370 tttcttgagattgtttttattttaaaaattactatctttttcttct 32580415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 97 - 244
Target Start/End: Complemental strand, 34484142 - 34483995
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||| ||||||||||||||||||||    
T  34484142 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgaga 34484043  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||    
T  34484042 tttcttgagattgtttttgttttaaaagttactatctctttcttctca 34483995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 17946382 - 17946528
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  17946382 caaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 17946481  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||    
T  17946482 tttcttgagattgtttttcttttaaaagttactatctatttcttctc 17946528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 97 - 239
Target Start/End: Original strand, 18749706 - 18749848
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  18749706 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 18749805  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttct 239  Q
    |||||||||||||||||| |||||||||||||||||| |||||    
T  18749806 tttcttgagattgtttttcttttaaaagttactatctctttct 18749848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 44906625 - 44906479
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| || ||||||| |||||||||||||||||||||    
T  44906625 caaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaaaagatgaga 44906526  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||    
T  44906525 tttcttgagattgtttttcttttaaaagttactatctctttcttctc 44906479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 97 - 244
Target Start/End: Original strand, 54628938 - 54629085
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||| |||||||||||    
T  54628938 caaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgaga 54629037  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||||||    
T  54629038 tttcttgagattgtttttcttttgaaagttactatctctttcttctca 54629085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 98 - 227
Target Start/End: Original strand, 11431621 - 11431750
Alignment:
Q  98 aaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagat 197  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  11431621 aaatttcgaaggattgtttaataaattggattttggtggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 11431720  T
Q  198 ttcttgagattgtttttattttaaaagtta 227  Q
    ||||||||||||||||||||||||||||||    
T  11431721 ttcttgagattgtttttattttaaaagtta 11431750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 26107355 - 26107501
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| || |||||||||| |||||| |||||||||||    
T  26107355 caaatttcgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcataaaaagatgaga 26107454  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||||    
T  26107455 tttcttgagattgtttttcttttaaaagttactttctctttcttctc 26107501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 48379251 - 48379397
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| || ||||||| ||||||||||||||||| |||    
T  48379251 caaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcatgaaaagatcaga 48379350  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| ||||||| |||||||||| |||||||||    
T  48379351 tttcttgagattgtttttcttttaaatgttactatctctttcttctc 48379397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 97 - 233
Target Start/End: Original strand, 40897238 - 40897375
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  40897238 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 40897337  T
Q  197 tttcttgagattgtttttatttt-aaaagttactatct 233  Q
    |||||||| ||||||||| ||||  |||||||||||||    
T  40897338 tttcttgatattgtttttcttttgtaaagttactatct 40897375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 97 - 244
Target Start/End: Complemental strand, 31646396 - 31646251
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||  ||||||    
T  31646396 caaatttcgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa--atgaga 31646299  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    ||||||||||||||| || ||||||||||||||| || ||||||||||    
T  31646298 tttcttgagattgttattcttttaaaagttactacctctttcttctca 31646251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 52618077 - 52617937
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||       || ||||||||||| |||||||||||    
T  52618077 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattt------taacaagtctttcataaaaagatgaga 52617984  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||    
T  52617983 tttcttgagattgtttttcttttaaaagttactatctctttcttctc 52617937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 51737838 - 51737693
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| || ||||||||||||||||| ||||||| ||     
T  51737838 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtctttcataaaaagataagt 51737739  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
     |||||||||||||||||  ||||||||||| ||||| |||||||||    
T  51737738 attcttgagattgttttt-ctttaaaagttattatctctttcttctc 51737693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 97 - 239
Target Start/End: Original strand, 52810472 - 52810614
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| || |||||||| ||||||||||||||||||||    
T  52810472 caaattttgaatgattgtttaataaattgaattttgatggattttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagatgaga 52810571  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttct 239  Q
    |||||||||||||||||| |||||||||  ||||||| |||||    
T  52810572 tttcttgagattgtttttcttttaaaagaaactatctctttct 52810614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 105 - 216
Target Start/End: Complemental strand, 50903344 - 50903233
Alignment:
Q  105 gaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttga 204  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||| ||||| ||||||| ||||||||||||||    
T  50903344 gaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaatatgagatttcttga 50903245  T
Q  205 gattgtttttat 216  Q
    ||||||||||||    
T  50903244 gattgtttttat 50903233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 97 - 231
Target Start/End: Complemental strand, 10728753 - 10728629
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| |||||||||||||||||||||||||||||||||||||          |||||||||||| || |||||||||||||||||||||||||||||    
T  10728753 caaatttggaaggattgtttaataaattggattttgatggatttt----------gtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 10728664  T
Q  197 tttcttgagattgtttttattttaaaagttactat 231  Q
    |||||||||||||||||| ||||||||||||||||    
T  10728663 tttcttgagattgtttttcttttaaaagttactat 10728629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 97 - 233
Target Start/End: Original strand, 39038134 - 39038260
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||| |||||||||||||||||||||||||||||          ||||||||||||||| || ||||||||||||||||| |||||||||||    
T  39038134 caaatttcgaagaattgtttaataaattggattttgatggat----------tttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgaga 39038223  T
Q  197 tttcttgagattgtttttattttaaaagttactatct 233  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  39038224 tttcttgaaattgtttttcttttaaaagttactatct 39038260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 99 - 231
Target Start/End: Complemental strand, 50762160 - 50762038
Alignment:
Q  99 aatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatt 198  Q
    ||||||||| |||||||| ||||||||||||||||||||||||          |||||||||||| || |||||||||||||||||||||||||||||||    
T  50762160 aatttcgaatgattgtttgataaattggattttgatggatttt----------gtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 50762071  T
Q  199 tcttgagattgtttttattttaaaagttactat 231  Q
    |||||||||||||||| ||||||||||||||||    
T  50762070 tcttgagattgtttttcttttaaaagttactat 50762038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 3206317 - 3206200
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  |||||||||||||||||||||| ||||||    
T  3206317 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgaga 3206218  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  3206217 tttcttatgattgttttt 3206200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 227
Target Start/End: Original strand, 37454955 - 37455075
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||| ||||||||||||||||| ||||||          ||||||||||||||||||||| || |||||||||| ||||||||||||||||||    
T  37454955 caaatttcgaatgattgtttaataaattgaattttg----------tgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgaga 37455044  T
Q  197 tttcttgagattgtttttattttaaaagtta 227  Q
    |||||||||||||||||| ||||||||||||    
T  37455045 tttcttgagattgtttttcttttaaaagtta 37455075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 39842596 - 39842460
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||| ||||||||||||||| |||||||| |||||||          ||| |||||||| || |||||||||||||||||||||||||||||    
T  39842596 caaatttcgaagaattgtttaataaattagattttgacggatttt----------gtaatgtaattttaacaagaaaaagtctttcatgaaaagatgaga 39842507  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    ||||||| |||||||||| ||||||||||||| |||| |||||||||    
T  39842506 tttcttgggattgtttttcttttaaaagttaccatctctttcttctc 39842460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 145 - 239
Target Start/End: Complemental strand, 23753470 - 23753377
Alignment:
Q  145 ggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttct 239  Q
    ||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  23753470 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa-gatgagatttcttgagattgtttttgttttaaaagttactatctctttct 23753377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 996198 - 996081
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  996198 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 996099  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  996098 tttcttaggattgttttt 996081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 10139258 - 10139141
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  10139258 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 10139159  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  10139158 tttcttaggattgttttt 10139141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 19253921 - 19254038
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  19253921 caaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 19254020  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  19254021 tttcttaggattgttttt 19254038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 20498303 - 20498420
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  20498303 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 20498402  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  20498403 tttcttaggattgttttt 20498420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 6035165 - 6035039
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||| | ||||||||||||| |||||||||||||||| ||||||||| ||||  ||||| |  | ||||||||||||||| |||| ||||||    
T  6035165 caaatttcgaagcaatgtttaataaattagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcataaaaacatgaga 6035066  T
Q  197 tttcttgagattgtttttattttaaaa 223  Q
    |||||| ||||||||||| ||||||||    
T  6035065 tttcttaagattgtttttcttttaaaa 6035039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 97 - 211
Target Start/End: Complemental strand, 33807910 - 33807796
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  33807910 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 33807811  T
Q  197 tttcttgagattgtt 211  Q
    ||||||  |||||||    
T  33807810 tttcttaggattgtt 33807796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 3999757 - 3999640
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||| |||| ||||||    
T  3999757 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagaatgaaaaagtctttcataaaaacatgaga 3999658  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  3999657 tttcttaggattgttttt 3999640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 37820589 - 37820472
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| |||||||||  |||| ||||| |  | ||||||||||||||| |||| ||||||    
T  37820589 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttccagtgaaattttagcatgaaaaagtctttcataaaaacatgaga 37820490  T
Q  197 tttcttgagattgttttt 214  Q
    |||||| |||||||||||    
T  37820489 tttcttaagattgttttt 37820472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 101 - 214
Target Start/End: Complemental strand, 44762145 - 44762032
Alignment:
Q  101 tttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttc 200  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||| ||||||| ||||||||||    
T  44762145 tttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttc 44762046  T
Q  201 ttgagattgttttt 214  Q
    || |||||||||||    
T  44762045 ttaagattgttttt 44762032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 45862983 - 45863060
Alignment:
Q  145 ggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaa 222  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45862983 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaa 45863060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 54625686 - 54625803
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||| ||||||||||| ||||||    
T  54625686 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtttttcatgaaaacatgaga 54625785  T
Q  197 tttcttgagattgttttt 214  Q
    |||||| |||||| ||||    
T  54625786 tttcttaagattgatttt 54625803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 5825156 - 5825273
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| |||||||||||||||||||||||||||||| |||||| ||||||||| ||||| ||||  |  | ||||||| |||||||||||| ||||||    
T  5825156 caaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggctttcatgaaaacatgaga 5825255  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  5825256 tttcttatgattgttttt 5825273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 6589658 - 6589775
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||| ||| ||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  6589658 caaatttcgaagaattatttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 6589757  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  6589758 tttcttaggattgttttt 6589775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 105 - 198
Target Start/End: Original strand, 20833094 - 20833187
Alignment:
Q  105 gaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatt 198  Q
    ||||||||||||||||||||||||||||||||||||| || |||||  ||||||||||| || |||||||||| |||||||||||||| |||||    
T  20833094 gaaggattgtttaataaattggattttgatggattttgtgagatttattagtgtaattttaacaagaaaaagtatttcatgaaaagataagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 29448970 - 29448853
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||  ||||| |  |  ||||||||||||||||||| ||||||    
T  29448970 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcataaaaaagtctttcatgaaaacatgaga 29448871  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  29448870 tttcttaggattgttttt 29448853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 10660691 - 10660752
Alignment:
Q  183 atgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10660691 atgaaaagatgagatttcttgagattgtttttattttaaaagttactatttttttcttctca 10660752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 40246938 - 40247055
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| |||||||||||||||||||  |||||||||||||||| ||||||||| ||||| |||||    | |||||||||||||||||||| ||||||    
T  40246938 caaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgaga 40247037  T
Q  197 tttcttgagattgttttt 214  Q
    || |||  ||||||||||    
T  40247038 ttccttatgattgttttt 40247055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 97 - 199
Target Start/End: Original strand, 35337829 - 35337930
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||| ||||||||||| ||||||    
T  35337829 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt-tttcatgaaaacatgaga 35337927  T
Q  197 ttt 199  Q
    |||    
T  35337928 ttt 35337930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 33996653 - 33996548
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  ||||||||||||||||  |||||||| ||||| ||||| |  | |||||||||||| || |||| ||||||    
T  33996653 caaatttcgaaggattgtttaataaatcagattttgatggattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatgaga 33996554  T
Q  197 tttctt 202  Q
    ||||||    
T  33996553 tttctt 33996548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 25418460 - 25418577
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||  ||||||||||||||||||  |||||||||||||||| ||||||||| ||||| |||||    | |||||||| ||||||||||| ||||||    
T  25418460 caaatttgaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtatttcatgaaaacatgaga 25418559  T
Q  197 tttcttgagattgttttt 214  Q
    || |||  ||||||||||    
T  25418560 ttccttaggattgttttt 25418577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 98 - 214
Target Start/End: Complemental strand, 1440005 - 1439889
Alignment:
Q  98 aaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagat 197  Q
    |||||| |||||||||||||||||||| ||||||||| |||||| ||||||||| ||||  |||||    | |||||||||||||| ||||| |||||||    
T  1440005 aaatttggaaggattgtttaataaattagattttgatagattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgagat 1439906  T
Q  198 ttcttgagattgttttt 214  Q
    || ||  ||||||||||    
T  1439905 tttttaggattgttttt 1439889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 126 - 214
Target Start/End: Complemental strand, 6131316 - 6131228
Alignment:
Q  126 gattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 214  Q
    |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||||||||  ||||||||||    
T  6131316 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 6131228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 134 - 239
Target Start/End: Complemental strand, 15492942 - 15492836
Alignment:
Q  134 tggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaag-ttactatc 232  Q
    |||||||| | |||| || ||||| ||||| || |||||||| |||||||||||   || ||||||||||||||||||||||||||||||| ||||||||    
T  15492942 tggattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttcttgagattgtttttattttaaaagtttactatc 15492843  T
Q  233 tttttct 239  Q
    | |||||    
T  15492842 tatttct 15492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 10660629 - 10660673
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggatttt 141  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  10660629 caaatttcgaaggattgtttaataaattggattttgatggatttt 10660673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 226
Target Start/End: Original strand, 44276506 - 44276598
Alignment:
Q  134 tggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtt 226  Q
    |||||||| ||||||||| ||||| ||||| || |||||||| ||||||||||| | ||||||||| ||| |||| ||||| |||||||||||    
T  44276506 tggattttgtgggattttctagtgaaattttaacaagaaaaaatctttcatgaagacatgagattttttgggattatttttcttttaaaagtt 44276598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 214
Target Start/End: Complemental strand, 53929239 - 53929123
Alignment:
Q  98 aaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagat 197  Q
    |||| ||||| |||||||||||||||  |||||||||||||||| | ||||||| ||||| ||||| |  | |||||| ||||| ||||||| |||||||    
T  53929239 aaatatcgaacgattgtttaataaataagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagat 53929140  T
Q  198 ttcttgagattgttttt 214  Q
    || ||  ||||||||||    
T  53929139 tttttaggattgttttt 53929123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 1440064 - 1440010
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggatttt 151  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  1440064 caaatttccaaggattgtttaataaatcagattttgatggattttatgggatttt 1440010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 22057856 - 22057922
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattt 163  Q
    |||||||||| ||||||||||||||||  |||||||||||||||| ||||||||| ||||| |||||    
T  22057856 caaatttcgatggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattt 22057922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 194
Target Start/End: Complemental strand, 51699592 - 51699495
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatga 194  Q
    ||||||||||||||||| |||||||||  |||||||||| ||||| ||||||||| ||||| ||||| |  | |||||| |||||| |||||| ||||    
T  51699592 caaatttcgaaggattggttaataaataagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaaatctttcgtgaaaacatga 51699495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 52114623 - 52114728
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||| |||||||||||||||||  ||||||||| |||||| ||| ||||| ||||  ||||| |  | |||||| |||||  |||||| ||||||    
T  52114623 caaatttcgcaggattgtttaataaatcagattttgatagattttgtggaattttctagtaaaattttagcatgaaaaaatcttttgtgaaaacatgaga 52114722  T
Q  197 tttctt 202  Q
    ||||||    
T  52114723 tttctt 52114728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 137
Target Start/End: Complemental strand, 539516 - 539476
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatgga 137  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  539516 caaatttcgaaggattatttaataaattggattttgatgga 539476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 55235278 - 55235322
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggatttt 141  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||    
T  55235278 caaatttcgaaagattgtttaataaattggtttttgatggatttt 55235322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 132
Target Start/End: Complemental strand, 23753498 - 23753463
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttg 132  Q
    ||||||||||||||||||||||||||||||||||||    
T  23753498 caaatttcgaaggattgtttaataaattggattttg 23753463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 29030099 - 29030153
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggatttt 151  Q
    ||||||| |||||||||||||||||||  |||||||||||||||| ||| |||||    
T  29030099 caaattttgaaggattgtttaataaatcagattttgatggattttgtggaatttt 29030153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 27899467 - 27899545
Alignment:
Q  136 gattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 214  Q
    |||||| | ||||||| ||||| ||||| |  | |||||||||||||||||||| |||| |||||||  ||||||||||    
T  27899467 gattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttatgattgttttt 27899545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 33807719 - 33807678
Alignment:
Q  170 gaaaaagtctttcatgaaaagatgagatttcttgagattgtt 211  Q
    |||||||||||||||||||| ||||||||||||  |||||||    
T  33807719 gaaaaagtctttcatgaaaacatgagatttcttaggattgtt 33807678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 97 - 239
Target Start/End: Original strand, 10655 - 10797
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  10655 caaatttcaaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 10754  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttct 239  Q
    |||||||||||||||||| |||||||||||||||||| |||||    
T  10755 tttcttgagattgtttttgttttaaaagttactatctctttct 10797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 4e-60; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 97 - 244
Target Start/End: Original strand, 26788882 - 26789026
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||   |||||||||    
T  26788882 caaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat---aagatgaga 26788978  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26788979 tttcttgagattgtttttattttaaaagttactatctttttcttctca 26789026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 97 - 235
Target Start/End: Original strand, 18177363 - 18177501
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||| || |||||||||||    
T  18177363 caaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttaataaaaagatgaga 18177462  T
Q  197 tttcttgagattgtttttattttaaaagttactatcttt 235  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18177463 tttcttgagattgtttttattttaaaagttactatcttt 18177501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 10657502 - 10657648
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||| |||||||||||||||| |    
T  10657502 caaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgaaa 10657601  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||||    
T  10657602 tttcttgagattgtttttcttttaaaaggtactatctctttcttctc 10657648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 25288255 - 25288401
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| || |||| || |||||||||||||||||||||    
T  25288255 caaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtctttcatgaaaagatgaga 25288354  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||    
T  25288355 tttcttgagattgtttttcttttaaaagttactatatatttcttctc 25288401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 28844651 - 28844797
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||| || ||||||||||||||||| |||||||||||    
T  28844651 caaatttcgaaggattgtttaataaattagattttgatggattttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaaaagatgaga 28844750  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| |||||||||||| ||||| |||||||||    
T  28844751 tttcttgagattgtttttcttttaaaagttagtatctatttcttctc 28844797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 33135719 - 33135864
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||| |||| ||||||    
T  33135719 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat-aaaaaatgaga 33135817  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| |||||||||||| ||||| |||||||||    
T  33135818 tttcttgagattgtttttcttttaaaagttattatctctttcttctc 33135864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 43078659 - 43078805
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||| || | ||||||||||||||| ||||||| |||    
T  43078659 caaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaagataaga 43078758  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| |||||||||||| ||||| |||||||||    
T  43078759 tttcttgagattgtttttgttttaaaagttagtatctctttcttctc 43078805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 6224633 - 6224535
Alignment:
Q  145 ggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||    
T  6224633 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgatattgtttttcttttaaaagttactatctctttcttctc 6224535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 97 - 242
Target Start/End: Complemental strand, 13833536 - 13833401
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| ||||||||||||||||||||||||||||          ||||||||||||||||||||| || ||||||||||||||||||| |||||||||    
T  13833536 caaattttgaaggattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgacaagatgaga 13833447  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttct 242  Q
    ||||||||||||| |||| |||||||| ||||||||| ||||||||    
T  13833446 tttcttgagattgcttttcttttaaaaattactatctctttcttct 13833401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 3463772 - 3463894
Alignment:
Q  101 tttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttc 200  Q
    |||| |||||||||||||||||||||||||||||||||          ||||||||||||||| || |||||||||||||||||||||| ||||||||||    
T  3463772 tttcaaaggattgtttaataaattggattttgatggat----------tttgtagtgtaattttaacaagaaaaagtctttcatgaaaatatgagatttc 3463861  T
Q  201 ttgagattgtttttattttaaaagttactatct 233  Q
    |||||||||||||| ||||||||||||||||||    
T  3463862 ttgagattgtttttgttttaaaagttactatct 3463894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 28740397 - 28740275
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||          |||||||| || ||||||||||||||||| |||||||||||    
T  28740397 caaatttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcataaaaagatgaga 28740308  T
Q  197 tttcttgagattgtttttattttaaaagttact 229  Q
    |||||||||||||||||| ||||||||||||||    
T  28740307 tttcttgagattgtttttcttttaaaagttact 28740275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 379033 - 379169
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| |||||||||||||||||||||||||||||| ||||          |||||||||||||| || |||||||| || |||||||||||||||||    
T  379033 caaattttgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaagaaaaaatcgttcatgaaaagatgaga 379122  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    ||| |||||||||||||| |||||||| ||||||||| |||||||||    
T  379123 tttattgagattgtttttcttttaaaacttactatctctttcttctc 379169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 7027054 - 7027129
Alignment:
Q  168 aagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7027054 aagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctc 7027129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 215303 - 215206
Alignment:
Q  145 ggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    ||||||||||||||||||| || | ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||    
T  215303 ggattttgtagtgtaattttaaca-gaaaaagtctttcatgaaaagatgagatttcatgagattgtttttcttttaaaagttactatctctttcttctc 215206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 12407476 - 12407593
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| |||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  12407476 caaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaaaacatgaga 12407575  T
Q  197 tttcttgagattgttttt 214  Q
    |||||| |||||||||||    
T  12407576 tttcttaagattgttttt 12407593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 16269787 - 16269904
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  16269787 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 16269886  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  16269887 tttcttaggattgttttt 16269904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 24776451 - 24776568
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  24776451 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 24776550  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  24776551 tttcttaggattgttttt 24776568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 98 - 214
Target Start/End: Original strand, 20605333 - 20605449
Alignment:
Q  98 aaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagat 197  Q
    ||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| |||||||    
T  20605333 aaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagat 20605432  T
Q  198 ttcttgagattgttttt 214  Q
    |||||  ||||||||||    
T  20605433 ttcttaggattgttttt 20605449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 14198691 - 14198574
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||| ||||||||||||| ||||||    
T  14198691 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgaga 14198592  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  14198591 tttcttaggattgttttt 14198574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 31170738 - 31170621
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| ||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  31170738 caaatttccaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 31170639  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  31170638 tttcttaggattgttttt 31170621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 32125349 - 32125454
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||  ||||| |  | |||||||||||||||||||| ||||||    
T  32125349 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaatatgaga 32125448  T
Q  197 tttctt 202  Q
    ||||||    
T  32125449 tttctt 32125454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 35317158 - 35317275
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||| ||||| ||||| ||||| |  | |||||||||||||||||||| || |||    
T  35317158 caaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataaga 35317257  T
Q  197 tttcttgagattgttttt 214  Q
    |||||| | |||||||||    
T  35317258 tttcttaacattgttttt 35317275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 5093161 - 5093044
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| |||||||||||||||||||  |||||||||||||||| ||||||||| || || ||||| |  | ||||||||||||||| |||| ||||||    
T  5093161 caaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcataaaaacatgaga 5093062  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  5093061 tttcttaggattgttttt 5093044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 22551877 - 22551760
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||| ||||||||| ||||||  ||||||||||||||| ||||||||| ||||| ||||| |  | |||||||| ||||||||||| ||||||    
T  22551877 caaatttcgaatgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaaaacatgaga 22551778  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  22551777 tttcttatgattgttttt 22551760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 43847742 - 43847859
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  || ||||||||||||| ||| ||||| ||||| ||||| |  | |||||||||| ||||||||| ||||||    
T  43847742 caaatttcgaaggattgtttaataaatcagaatttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcatgaaaacatgaga 43847841  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  43847842 tttcttaggattgttttt 43847859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 9120231 - 9120339
Alignment:
Q  106 aaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgag 205  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||| |  | | |||| ||||||||||||| ||||||||||||  |    
T  9120231 aaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtatggaaaaatctttcatgaaaacatgagatttcttagg 9120330  T
Q  206 attgttttt 214  Q
    |||||||||    
T  9120331 attgttttt 9120339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 97 - 240
Target Start/End: Complemental strand, 10125404 - 10125270
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| |||||||||||||||||||| ||||||          ||||||||| ||||| ||||| || ||||||||||||||||| |||| | ||||    
T  10125404 caaatttcaaaggattgtttaataaattgaattttg----------tgggattttttagtgaaattttaacaagaaaaagtctttcataaaaacacgaga 10125315  T
Q  197 tttcttgagattgtttttattttaaaag-ttactatctttttctt 240  Q
    |||||| ||||||||||| ||||||||| ||||||||| ||||||    
T  10125314 tttcttaagattgtttttcttttaaaagtttactatctctttctt 10125270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 97 - 212
Target Start/End: Complemental strand, 305579 - 305464
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| ||| |||||||||||||||  ||||| |||||||||| || |||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  305579 caaattttgaatgattgtttaataaatcagatttcgatggattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaaaacatgaga 305480  T
Q  197 tttcttgagattgttt 212  Q
    ||||||  ||||||||    
T  305479 tttcttaggattgttt 305464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 1789538 - 1789630
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaa 189  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| || || ||||| |  | ||||||||||||||| ||||    
T  1789538 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatcaaaa 1789630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 7026700 - 7026744
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggatttt 141  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  7026700 caaatttcgaaggattgtttaataaattggattttgatggatttt 7026744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 3574971 - 3575049
Alignment:
Q  145 ggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaa 223  Q
    ||||||||||||||||||| || || ||||| | |||| | ||||| ||||||||||||||||||||||| ||||||||    
T  3574971 ggattttgtagtgtaattttaacaaaaaaaaatatttcgtaaaaagttgagatttcttgagattgtttttcttttaaaa 3575049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 44765871 - 44765937
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattt 163  Q
    ||||||||||| |||||||||||||||  |||||||||||||||| ||||||||| ||||| |||||    
T  44765871 caaatttcgaaagattgtttaataaataagattttgatggattttgtgggattttctagtgaaattt 44765937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 132
Target Start/End: Original strand, 3574943 - 3574978
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttg 132  Q
    ||||||||||||||||||||||||||||||||||||    
T  3574943 caaatttcgaaggattgtttaataaattggattttg 3574978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 132
Target Start/End: Complemental strand, 6224661 - 6224626
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttg 132  Q
    |||||||||||||||| |||||||||||||||||||    
T  6224661 caaatttcgaaggattatttaataaattggattttg 6224626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 7026738 - 7026775
Alignment:
Q  145 ggattttgtagtgtaatttcaagaagaaaaagtctttc 182  Q
    ||||||||||||||||||| || |||||||||||||||    
T  7026738 ggattttgtagtgtaattttaacaagaaaaagtctttc 7026775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 39729 - 39583
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||| |||    
T  39729 caaacttcgaaggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataaga 39630  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||    
T  39629 tttcttgagattgtttttcttttaaaagttactatctctttcttctc 39583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 111; Significance: 6e-56; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 58188 - 58042
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || |||| ||| ||||||||||||||||||||    
T  58188 caaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatctttcatgaaaagatgaga 58089  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||    
T  58088 tttcttgagattgtttttcttttaaaagttactatctctttcttctc 58042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 98 - 243
Target Start/End: Complemental strand, 37018 - 36876
Alignment:
Q  98 aaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagat 197  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||| ||||    
T  37018 aaatttcgaagcattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagat 36919  T
Q  198 ttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    ||||||||||||   || |||||||||||| ||||| |||||||||    
T  36918 ttcttgagattg---ttcttttaaaagttattatctctttcttctc 36876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 103 - 240
Target Start/End: Complemental strand, 3798 - 3661
Alignment:
Q  103 tcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttctt 202  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||| ||||||||| ||||||| | |||| ||    
T  3798 tcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaagattatatttttt 3699  T
Q  203 gagattgtttttattttaaaagttactatctttttctt 240  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  3698 gagattgtttttcttttaaaagttactatctctttctt 3661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 959 - 1101
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||| ||| |||||||||| | ||||||||||||||| ||||||||||||||||||||| ||  |||||||||||||||| |||| ||||||    
T  959 caaatttcgaagaattatttaataaatag-attttgatggattttgtgggattttgtagtgtaattttaactagaaaaagtctttcattaaaatatgaga 1057  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctc 243  Q
    ||||||||||||||||   |||||||||||||||||| |||||||||    
T  1058 tttcttgagattgttt---ttttaaaagttactatctctttcttctc 1101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 97 - 244
Target Start/End: Original strand, 13977 - 14114
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| || ||||||||||||||||||||||||||||||          |||||||||  |||| || |||||||||||||||||||||||||||||    
T  13977 caaatttcaaaagattgtttaataaattggattttgatggat----------tttgtagtgggattttaataagaaaaagtctttcatgaaaagatgaga 14066  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||    
T  14067 tttcttgagattgtttttcttttaaaagttactatctctttcttctca 14114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 97 - 244
Target Start/End: Complemental strand, 21350 - 21213
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| || |||||||||||||||||||||||||||||||||          ||||||  |||| || |||||||||||||||||||||||||||||    
T  21350 caaatttcaaaagattgtttaataaattggattttgatggatttt----------gtagtgggattttaataagaaaaagtctttcatgaaaagatgaga 21261  T
Q  197 tttcttgagattgtttttattttaaaagttactatctttttcttctca 244  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||    
T  21260 tttcttgagattgtttttcttttaaaagttactatctctttcttctca 21213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 114 - 244
Target Start/End: Original strand, 28463 - 28584
Alignment:
Q  114 tttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttt 213  Q
    ||||||||||||||||||||||||||||          ||||||  |||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  28463 tttaataaattggattttgatggattttg---------gtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattgtttt 28553  T
Q  214 tattttaaaagttactatctttttcttctca 244  Q
    | |||||||||||||||||| ||||||||||    
T  28554 tcttttaaaagttactatctctttcttctca 28584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 134 - 233
Target Start/End: Original strand, 14892 - 14991
Alignment:
Q  134 tggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 233  Q
    |||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  14892 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattgtttttcttttaaaagttactatct 14991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 15145 - 15028
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| |||| |    
T  15145 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaa 15046  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  15045 tttcttaggattgttttt 15028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 15788 - 15671
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| |||| |    
T  15788 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaa 15689  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  15688 tttcttaggattgttttt 15671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 38716 - 38600
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||||||||||||||||| |  |||||||||||||||| ||||||||| ||||| ||||| |  | |||||||||||||||||||| ||||||    
T  38716 caaatttcgaaggattgtttaataa-tcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 38618  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  38617 tttcttaggattgttttt 38600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 100306 - 100411
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    |||||||| ||||||||||||||||||   ||||||||||||||| |||| |||| ||||| ||||| || |||||||||||||||||||||| ||||||    
T  100306 caaatttcaaaggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaacatgaga 100405  T
Q  197 tttctt 202  Q
    ||||||    
T  100406 tttctt 100411  T

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Target: scaffold0004 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 102190 - 102307
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||||||| |||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||| |  | ||||||||||||||| |||| ||||||    
T  102190 caaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaatatgaga 102289  T
Q  197 tttcttgagattgttttt 214  Q
    ||||||  ||||||||||    
T  102290 tttcttatgattgttttt 102307  T

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Target: scaffold0113 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 39007 - 38890
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| |||||||||||||||||||  |||||||||||||||| ||||||||| ||||| |||||    | |||||||||||||||||||| ||||||    
T  39007 caaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgaga 38908  T
Q  197 tttcttgagattgttttt 214  Q
    || |||  ||||||||||    
T  38907 ttccttaggattgttttt 38890  T

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Target: scaffold0276 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 219
Target Start/End: Complemental strand, 651 - 529
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaatttcaagaagaaaaagtctttcatgaaaagatgaga 196  Q
    ||||||| |||||||||||||||||||   ||||||||||||||| ||| ||||| ||||| |||||    | |||||||||||| | ||||| ||||||    
T  651 caaatttggaaggattgtttaataaatcatattttgatggattttgtggaattttctagtgaaattttggtatgaaaaagtctttgacgaaaacatgaga 552  T
Q  197 tttcttgagattgtttttatttt 219  Q
    ||||||  |||| ||||| ||||    
T  551 tttcttaggattttttttttttt 529  T

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Target: scaffold0922 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 4295 - 4337
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggatt 139  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  4295 caaattttgaaggattgtttaataaattggattttgatggatt 4337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 157
Target Start/End: Original strand, 199920 - 199980
Alignment:
Q  97 caaatttcgaaggattgtttaataaattggattttgatggattttatgggattttgtagtg 157  Q
    ||||||| ||| || |||||||||||||| |||||||| |||||| || |||||| |||||    
T  199920 caaattttgaaagagtgtttaataaattgaattttgattgattttgtgagattttttagtg 199980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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