View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0586_low_47 (Length: 318)
Name: NF0586_low_47
Description: NF0586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0586_low_47 |
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| [»] scaffold0063 (1 HSPs) |
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Alignment Details
Target: scaffold0063 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0063
Description:
Target: scaffold0063; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 89 - 231
Target Start/End: Original strand, 30825 - 30966
Alignment:
| Q |
89 |
gaaaccaagagggctactgaacaaaaaccctaattagaatcatcaagaaacgatggccaacaacctttctcatttcctgaatctttaaaccaaaaccaaa |
188 |
Q |
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||||| ||||||| |||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||| |
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| T |
30825 |
gaaacgaagagggggactgaa-aaaaaccctaattagaatcatcaagaaacggcggccaaaaacctttctcatttccaaaatctttaaaccaaaaccaac |
30923 |
T |
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| Q |
189 |
acaataacaacaccacaaatcataatcacctcaaacccagaca |
231 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30924 |
acaataacaacaccacaaatcataatcacctcaaacccagaca |
30966 |
T |
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