View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0586_low_63 (Length: 268)
Name: NF0586_low_63
Description: NF0586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0586_low_63 |
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Alignment Details
Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 38935041 - 38935108
Alignment:
| Q |
173 |
gtaagaatcttacgtcaccgtacctttgaccctctctctttctttcccctttatacccttctttctct |
240 |
Q |
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| T |
38935041 |
gtaagaatcttacgtcaccgtacctttgaccctctctctttctttcccctttatacccttctttctct |
38935108 |
T |
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Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 38934917 - 38934977
Alignment:
| Q |
47 |
ctaccaaataaagtaacataacaaaccactttctctttgaccaaagaccaaaaacgcaagc |
107 |
Q |
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| T |
38934917 |
ctaccaaataaagtaacataacaaaccactttctctttgaccaaagaccaaaaacgcaagc |
38934977 |
T |
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