View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0586_low_72 (Length: 253)
Name: NF0586_low_72
Description: NF0586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0586_low_72 |
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Alignment Details
Target: chr1 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 49 - 226
Target Start/End: Complemental strand, 34784853 - 34784677
Alignment:
| Q |
49 |
attgttgcaccatttttctaagttatgatctgttttaggtcttccataaatggttacgggttttgtgcttaaaatatgtctaattaaccccgattctaaa |
148 |
Q |
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| T |
34784853 |
attgttgcaccatttttctaagttattgtctgttttagatcctacataaatggttacgg-ttttgtgcttaaaatatgtctaattaacctcgattctaaa |
34784755 |
T |
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| Q |
149 |
cgacgtaaaactttgtgtattgaagaaacaacatcaattatgttatattatatacttggaaaattattggtaataatg |
226 |
Q |
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| T |
34784754 |
cgacgtaaaactttgtgtattgaagaaacaacatcaattatgttatattatatacttggaaaattattggtaataatg |
34784677 |
T |
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