View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0586_low_79 (Length: 250)
Name: NF0586_low_79
Description: NF0586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0586_low_79 |
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Alignment Details
Target: chr3 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 41975937 - 41976174
Alignment:
| Q |
1 |
taatatggaacattaacatgggagtgtgcatggttcataaccttttaacagtgacggagaatagcgccgaactaggtattatcttgtatcgatgaataaa |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41975937 |
taatatggaacattaacatgggagtgtgcatggttcataaccttttagcagtgacggagaatagcgccgaactaggtattatcttgtatcgatgaataaa |
41976036 |
T |
|
| Q |
101 |
agctgtctgcgacacatttggcatcctctgagaaaataactatcaaatcaaagcactctttgatctaacaaatacaactaacaaagctttagtttcacct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |
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| T |
41976037 |
agctgtctgcgacacatttggcatcctctgagaaaataactatcaaatcaaagcactctttgatctaacaaatacagctaacaaagctttaatttcacct |
41976136 |
T |
|
| Q |
201 |
tcacgaacttatatcacaggctccaaccaaatcgtctc |
238 |
Q |
| |
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|||| ||||||||||| ||||||||||||||||||||| |
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| T |
41976137 |
tcacaaacttatatcataggctccaaccaaatcgtctc |
41976174 |
T |
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