View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0587_high_12 (Length: 304)
Name: NF0587_high_12
Description: NF0587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0587_high_12 |
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Alignment Details
Target: chr5 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 30 - 295
Target Start/End: Original strand, 41795959 - 41796223
Alignment:
| Q |
30 |
catatatacatataatgatataaagaaccgaaacacattatctaaaaggctcgaggaactggtattatagcttaggaattgttaggagtcatttcaaact |
129 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41795959 |
catatataca-ataatgatataaagaaccgaaacacattatctaaaaggctcgaggaactggtattatagcttaggaattgttaggagtcatttcaaact |
41796057 |
T |
|
| Q |
130 |
caggaaagcttcttgattcataaaactagttatagctaattaattagcatatctcaaaagttaaaactatgttatttctgcatataacaactgattgtta |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41796058 |
caggaaagcttcttgattcataaaactagttatagctaattaattagcatatctcaaaagttaaaactatgttatttctgcatataacaactgattgtta |
41796157 |
T |
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| Q |
230 |
gcatgtaacatatataattacataaaccacttgaagttgaacgcacctgcaacgattagcctatga |
295 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41796158 |
gcatgtaacatatataattacataaaccacttgaagttgaacgcacctgcaacgattagcctatga |
41796223 |
T |
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