View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0587_high_6 (Length: 361)
Name: NF0587_high_6
Description: NF0587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0587_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 4 - 309
Target Start/End: Complemental strand, 32936600 - 32936291
Alignment:
| Q |
4 |
aagttaactcataaaatgatggtgtccgaagcatatatata----catccaaccttacaatgtaacctcgatacaacttcaatcgatataagataaagaa |
99 |
Q |
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|||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32936600 |
aagttaactcattaaatgatggtgtccgaagcatatatatatatacatccaaccttacaatgtaacctcgatacaacttcaatcgatataagataaagaa |
32936501 |
T |
|
| Q |
100 |
ttaacctaatattgatagcgttctccatttgaaaaacatgcctaacaaataagccagcatgatcccaattgtaactgatagctacaagaaaacaacataa |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32936500 |
ttaacctaatattgatagcgttctccatttgaaaaacatgcctaacaaataagccagcatgatcccaattgtaactgatagctacaagaaaacaacataa |
32936401 |
T |
|
| Q |
200 |
aaaatattcgtatcaaattaatgagaataataataaaaatgaacgcatgtgatgtaattctctgtttcaaagcaacataaagccaacctggttcacagat |
299 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
32936400 |
aaaatattcgtatcaaattaatgagaataataataaaaatgaacgcatgtgatgtaattctctgtttcaaagcaacataaaaccaacctggttcacagat |
32936301 |
T |
|
| Q |
300 |
cctatgctac |
309 |
Q |
| |
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|||| ||||| |
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| T |
32936300 |
cctaggctac |
32936291 |
T |
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