View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0589-Insertion-6 (Length: 329)
Name: NF0589-Insertion-6
Description: NF0589
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0589-Insertion-6 |
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Alignment Details
Target: chr3 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 15 - 328
Target Start/End: Original strand, 22405241 - 22405559
Alignment:
| Q |
15 |
gaatgagttacaaacaacattattattattataaattacgcagtacttccatct---gactcattttcatttgattgctctcaaaacccatttccatgta |
111 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
22405241 |
gaatgagttacaaacaacattattattattataaattacgcaatacttccatctaaagactcattttcatttgattgctctcaaaacctatttccatgta |
22405340 |
T |
|
| Q |
112 |
agtgtttttt-atgtaatcacaacacctatttgaaaa-caacattaaaaacaatttataagaatgattgagcattatcatctatatgtggcagtaagcaa |
209 |
Q |
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|||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
22405341 |
agtgtttttttatgtaatcacaacacctatttgaaaaacaacattaaaaacaatttataagaatgattgagcattatcatctatatgtggcagtgagcaa |
22405440 |
T |
|
| Q |
210 |
agatacaaagtaaaaggataatcaaacagttactatttgttggatgatcaaaacatgaagacattaaaagctagcatgaattccttcgttttttattctt |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22405441 |
agatacaaagtaaaaggataatcaaacagttactatttgttggatgatgaaaacatgaagacattaaaagctagcatgaattccttcgttttttattctt |
22405540 |
T |
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| Q |
310 |
gggtttcgcaccggtttcc |
328 |
Q |
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|||||| |||| ||||||| |
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| T |
22405541 |
gggttttgcactggtttcc |
22405559 |
T |
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