View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0589_high_11 (Length: 425)

Name: NF0589_high_11
Description: NF0589
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0589_high_11
NF0589_high_11
[»] chr7 (5 HSPs)
chr7 (16-404)||(21291368-21291749)
chr7 (384-413)||(22600457-22600486)
chr7 (380-412)||(27263363-27263395)
chr7 (380-412)||(27270257-27270289)
chr7 (347-407)||(44454506-44454561)
[»] chr8 (3 HSPs)
chr8 (380-412)||(35198544-35198576)
chr8 (352-405)||(15079166-15079214)
chr8 (380-413)||(29908033-29908066)
[»] chr4 (3 HSPs)
chr4 (380-412)||(10148201-10148233)
chr4 (378-410)||(34545954-34545986)
chr4 (380-408)||(55421580-55421608)
[»] chr6 (5 HSPs)
chr6 (346-405)||(331900-331954)
chr6 (382-413)||(28951423-28951454)
chr6 (377-412)||(33542814-33542849)
chr6 (379-412)||(788887-788920)
chr6 (377-405)||(12735156-12735184)
[»] chr5 (5 HSPs)
chr5 (354-408)||(43108570-43108619)
chr5 (380-408)||(16076453-16076481)
chr5 (380-412)||(17708096-17708128)
chr5 (378-406)||(20125046-20125074)
chr5 (352-404)||(33654747-33654794)
[»] chr1 (10 HSPs)
chr1 (378-412)||(47417803-47417837)
chr1 (352-413)||(2889932-2889988)
chr1 (380-409)||(8253761-8253790)
chr1 (378-415)||(10385308-10385345)
chr1 (380-413)||(19020594-19020627)
chr1 (353-406)||(34808576-34808624)
chr1 (380-413)||(45140012-45140045)
chr1 (347-407)||(30678825-30678880)
chr1 (379-407)||(35011414-35011442)
chr1 (381-413)||(51241513-51241545)
[»] chr2 (6 HSPs)
chr2 (347-404)||(24393239-24393291)
chr2 (380-408)||(11560520-11560548)
chr2 (379-415)||(12231898-12231934)
chr2 (380-412)||(16877146-16877178)
chr2 (380-412)||(16989277-16989309)
chr2 (352-404)||(31815902-31815949)
[»] chr3 (4 HSPs)
chr3 (379-407)||(16980366-16980394)
chr3 (379-415)||(26973382-26973418)
chr3 (346-406)||(33223861-33223916)
chr3 (379-415)||(41258992-41259027)


Alignment Details
Target: chr7 (Bit Score: 318; Significance: 1e-179; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 16 - 404
Target Start/End: Complemental strand, 21291749 - 21291368
Alignment:
Q  16 ataccaagaaatgtatgcagacactaatatgaatcgaattcatagttactctttattttggtataaatccgggatatcgtcagcaattaatcatgtactt 115  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21291749 ataccaagaaatgtatgcagacactaatatgaatccaattcatagttactctttattttggtataaatccgggatatcgtcagcaattaatcatgtactt 21291650  T
Q  116 atgggactgccagtttataatagatactccctttccctttttatgatttctaatataatattaagaaaaattagaagagtttaatatttatgcacttgta 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21291649 atgggactgccagtttataatagatactccctttccctttttatgatttctaatata-tattaagaaaaattagaagagtttaatatttatgcacttgta 21291551  T
Q  216 aagagttttacagtgtcaatttatcatagccatttatgtccctaatactaaaaacgattaagagaaaagtcaaacgattatgatcgattcacaatataaa 315  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  21291550 aagagttttacactgtcaatttatcatagccatttatgtccctaatattaaaaacgattaagataaaagtcaaacgattatgatcgattcacaatgtaaa 21291451  T
Q  316 cttttatcatttcattagagtagctgaagtagtccacgtgagcttaactcagttgttagaagtaggacaatgcataatatatgcaaggt 404  Q
    ||||||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||||||      ||||||| |||||||||||||||    
T  21291450 cttttatcatttcatcagagtagttgaagtagtccacgtgaacttaactcaattgttaga------acaatgcgtaatatatgcaaggt 21291368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 384 - 413
Target Start/End: Original strand, 22600457 - 22600486
Alignment:
Q  384 aatgcataatatatgcaaggttcagagttt 413  Q
    ||||||||||||||||||||||||||||||    
T  22600457 aatgcataatatatgcaaggttcagagttt 22600486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 412
Target Start/End: Original strand, 27263363 - 27263395
Alignment:
Q  380 ggacaatgcataatatatgcaaggttcagagtt 412  Q
    ||||||||||||||||||||||||||| |||||    
T  27263363 ggacaatgcataatatatgcaaggttcggagtt 27263395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 412
Target Start/End: Original strand, 27270257 - 27270289
Alignment:
Q  380 ggacaatgcataatatatgcaaggttcagagtt 412  Q
    ||||||||||||||||||||||||||| |||||    
T  27270257 ggacaatgcataatatatgcaaggttcggagtt 27270289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 407
Target Start/End: Original strand, 44454506 - 44454561
Alignment:
Q  347 gtccacgtgagcttaactcagttgttagaagtaggacaatgcataatatatgcaaggttca 407  Q
    |||| ||||||||||||||||||| |||     ||||||||||||| ||||||||||||||    
T  44454506 gtcctcgtgagcttaactcagttggtag-----ggacaatgcataaaatatgcaaggttca 44454561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 380 - 412
Target Start/End: Complemental strand, 35198576 - 35198544
Alignment:
Q  380 ggacaatgcataatatatgcaaggttcagagtt 412  Q
    |||||||||||||||||||||||||||||||||    
T  35198576 ggacaatgcataatatatgcaaggttcagagtt 35198544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 15079214 - 15079166
Alignment:
Q  352 cgtgagcttaactcagttgttagaagtaggacaatgcataatatatgcaaggtt 405  Q
    ||||||||||||||||||| |||     ||||||||||||||||||||||||||    
T  15079214 cgtgagcttaactcagttggtag-----ggacaatgcataatatatgcaaggtt 15079166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 380 - 413
Target Start/End: Original strand, 29908033 - 29908066
Alignment:
Q  380 ggacaatgcataatatatgcaaggttcagagttt 413  Q
    ||||||||||||||||||||||||| ||||||||    
T  29908033 ggacaatgcataatatatgcaaggtccagagttt 29908066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 380 - 412
Target Start/End: Original strand, 10148201 - 10148233
Alignment:
Q  380 ggacaatgcataatatatgcaaggttcagagtt 412  Q
    |||||||||||||||||||||||||||||||||    
T  10148201 ggacaatgcataatatatgcaaggttcagagtt 10148233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 410
Target Start/End: Original strand, 34545954 - 34545986
Alignment:
Q  378 taggacaatgcataatatatgcaaggttcagag 410  Q
    ||||||||||||||||||||||||||| |||||    
T  34545954 taggacaatgcataatatatgcaaggtccagag 34545986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Complemental strand, 55421608 - 55421580
Alignment:
Q  380 ggacaatgcataatatatgcaaggttcag 408  Q
    |||||||||||||||||||||||||||||    
T  55421608 ggacaatgcataatatatgcaaggttcag 55421580  T

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Target: chr6 (Bit Score: 32; Significance: 0.00000001; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 405
Target Start/End: Complemental strand, 331954 - 331900
Alignment:
Q  346 agtccacgtgagcttaactcagttgttagaagtaggacaatgcataatatatgcaaggtt 405  Q
    ||||| ||||||||||||||||||| ||||     |||||||||||||||||||||||||    
T  331954 agtcctcgtgagcttaactcagttggtaga-----gacaatgcataatatatgcaaggtt 331900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 413
Target Start/End: Original strand, 28951423 - 28951454
Alignment:
Q  382 acaatgcataatatatgcaaggttcagagttt 413  Q
    ||||||||||||||||||||||||||||||||    
T  28951423 acaatgcataatatatgcaaggttcagagttt 28951454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 412
Target Start/End: Complemental strand, 33542849 - 33542814
Alignment:
Q  377 gtaggacaatgcataatatatgcaaggttcagagtt 412  Q
    ||||||||||||||||||||||||||||||| ||||    
T  33542849 gtaggacaatgcataatatatgcaaggttcatagtt 33542814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 379 - 412
Target Start/End: Original strand, 788887 - 788920
Alignment:
Q  379 aggacaatgcataatatatgcaaggttcagagtt 412  Q
    |||||||||||||||||||||||||||| |||||    
T  788887 aggacaatgcataatatatgcaaggttcggagtt 788920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 405
Target Start/End: Complemental strand, 12735184 - 12735156
Alignment:
Q  377 gtaggacaatgcataatatatgcaaggtt 405  Q
    |||||||||||||||||||||||||||||    
T  12735184 gtaggacaatgcataatatatgcaaggtt 12735156  T

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Target: chr5 (Bit Score: 31; Significance: 0.00000004; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 408
Target Start/End: Original strand, 43108570 - 43108619
Alignment:
Q  354 tgagcttaactcagttgttagaagtaggacaatgcataatatatgcaaggttcag 408  Q
    ||||||||||||||||| ||     ||||||||||||||||||||||||||||||    
T  43108570 tgagcttaactcagttggta-----aggacaatgcataatatatgcaaggttcag 43108619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 16076453 - 16076481
Alignment:
Q  380 ggacaatgcataatatatgcaaggttcag 408  Q
    |||||||||||||||||||||||||||||    
T  16076453 ggacaatgcataatatatgcaaggttcag 16076481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 412
Target Start/End: Original strand, 17708096 - 17708128
Alignment:
Q  380 ggacaatgcataatatatgcaaggttcagagtt 412  Q
    ||||||||||||| |||||||||||||||||||    
T  17708096 ggacaatgcataaaatatgcaaggttcagagtt 17708128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 406
Target Start/End: Original strand, 20125046 - 20125074
Alignment:
Q  378 taggacaatgcataatatatgcaaggttc 406  Q
    |||||||||||||||||||||||||||||    
T  20125046 taggacaatgcataatatatgcaaggttc 20125074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 404
Target Start/End: Original strand, 33654747 - 33654794
Alignment:
Q  352 cgtgagcttaactcagttgttagaagtaggacaatgcataatatatgcaaggt 404  Q
    ||||||||||||||||||| |||     |||||||||||||||||||||||||    
T  33654747 cgtgagcttaactcagttggtag-----ggacaatgcataatatatgcaaggt 33654794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 31; Significance: 0.00000004; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 412
Target Start/End: Original strand, 47417803 - 47417837
Alignment:
Q  378 taggacaatgcataatatatgcaaggttcagagtt 412  Q
    ||||||||||||||||||||||||||||| |||||    
T  47417803 taggacaatgcataatatatgcaaggttcggagtt 47417837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 352 - 413
Target Start/End: Complemental strand, 2889988 - 2889932
Alignment:
Q  352 cgtgagcttaactcagttgttagaagtaggacaatgcataatatatgcaaggttcagagttt 413  Q
    ||||||||||||||||||| |||     ||||||||||||||||||||||||| ||| ||||    
T  2889988 cgtgagcttaactcagttggtag-----ggacaatgcataatatatgcaaggtccagtgttt 2889932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 380 - 409
Target Start/End: Original strand, 8253761 - 8253790
Alignment:
Q  380 ggacaatgcataatatatgcaaggttcaga 409  Q
    ||||||||||||||||||||||||||||||    
T  8253761 ggacaatgcataatatatgcaaggttcaga 8253790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 378 - 415
Target Start/End: Original strand, 10385308 - 10385345
Alignment:
Q  378 taggacaatgcataatatatgcaaggttcagagtttga 415  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  10385308 taggataatgcataatatatgcaaggttcggagtttga 10385345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 380 - 413
Target Start/End: Complemental strand, 19020627 - 19020594
Alignment:
Q  380 ggacaatgcataatatatgcaaggttcagagttt 413  Q
    |||||||||||||||||||||||||| |||||||    
T  19020627 ggacaatgcataatatatgcaaggtttagagttt 19020594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 406
Target Start/End: Complemental strand, 34808624 - 34808576
Alignment:
Q  353 gtgagcttaactcagttgttagaagtaggacaatgcataatatatgcaaggttc 406  Q
    ||||||||| |||||||||||     ||||||||||||||||||||||||||||    
T  34808624 gtgagcttagctcagttgtta-----aggacaatgcataatatatgcaaggttc 34808576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 380 - 413
Target Start/End: Complemental strand, 45140045 - 45140012
Alignment:
Q  380 ggacaatgcataatatatgcaaggttcagagttt 413  Q
    ||||||||||||||||||||||||| ||||||||    
T  45140045 ggacaatgcataatatatgcaaggtccagagttt 45140012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 407
Target Start/End: Complemental strand, 30678880 - 30678825
Alignment:
Q  347 gtccacgtgagcttaactcagttgttagaagtaggacaatgcataatatatgcaaggttca 407  Q
    |||| ||||||||||||||||||| |||     ||||||||||||||||||| ||||||||    
T  30678880 gtcctcgtgagcttaactcagttggtag-----ggacaatgcataatatatgtaaggttca 30678825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 407
Target Start/End: Original strand, 35011414 - 35011442
Alignment:
Q  379 aggacaatgcataatatatgcaaggttca 407  Q
    |||||||||||||||||||||||||||||    
T  35011414 aggacaatgcataatatatgcaaggttca 35011442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 413
Target Start/End: Original strand, 51241513 - 51241545
Alignment:
Q  381 gacaatgcataatatatgcaaggttcagagttt 413  Q
    |||||||||||||||||||||||||||| ||||    
T  51241513 gacaatgcataatatatgcaaggttcagggttt 51241545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 30; Significance: 0.0000001; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 404
Target Start/End: Original strand, 24393239 - 24393291
Alignment:
Q  347 gtccacgtgagcttaactcagttgttagaagtaggacaatgcataatatatgcaaggt 404  Q
    |||| |||||||||| |||||||||||     ||||||||||||||||||||||||||    
T  24393239 gtccccgtgagcttagctcagttgtta-----aggacaatgcataatatatgcaaggt 24393291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 11560520 - 11560548
Alignment:
Q  380 ggacaatgcataatatatgcaaggttcag 408  Q
    |||||||||||||||||||||||||||||    
T  11560520 ggacaatgcataatatatgcaaggttcag 11560548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 415
Target Start/End: Original strand, 12231898 - 12231934
Alignment:
Q  379 aggacaatgcataatatatgcaaggttcagagtttga 415  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  12231898 aggataatgcataatatatgcaaggtccagagtttga 12231934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 412
Target Start/End: Original strand, 16877146 - 16877178
Alignment:
Q  380 ggacaatgcataatatatgcaaggttcagagtt 412  Q
    ||||||||||||||||||||||||||| |||||    
T  16877146 ggacaatgcataatatatgcaaggttcggagtt 16877178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 412
Target Start/End: Original strand, 16989277 - 16989309
Alignment:
Q  380 ggacaatgcataatatatgcaaggttcagagtt 412  Q
    ||||||||||||||||||||||||||| |||||    
T  16989277 ggacaatgcataatatatgcaaggttcggagtt 16989309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 404
Target Start/End: Complemental strand, 31815949 - 31815902
Alignment:
Q  352 cgtgagcttaactcagttgttagaagtaggacaatgcataatatatgcaaggt 404  Q
    ||||||||||||||||||| |||     |||||||||||||||||||||||||    
T  31815949 cgtgagcttaactcagttggtag-----ggacaatgcataatatatgcaaggt 31815902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 29; Significance: 0.0000006; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 407
Target Start/End: Complemental strand, 16980394 - 16980366
Alignment:
Q  379 aggacaatgcataatatatgcaaggttca 407  Q
    |||||||||||||||||||||||||||||    
T  16980394 aggacaatgcataatatatgcaaggttca 16980366  T

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Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 415
Target Start/End: Original strand, 26973382 - 26973418
Alignment:
Q  379 aggacaatgcataatatatgcaaggttcagagtttga 415  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  26973382 aggacaatgcataatatatgtaaggttcggagtttga 26973418  T

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Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 406
Target Start/End: Original strand, 33223861 - 33223916
Alignment:
Q  346 agtccacgtgagcttaactcagttgttagaagtaggacaatgcataatatatgcaaggttc 406  Q
    ||||| |||||||||| |||||||| |||||     |||||||||||||||||||||||||    
T  33223861 agtcctcgtgagcttagctcagttggtagaa-----acaatgcataatatatgcaaggttc 33223916  T

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Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 415
Target Start/End: Original strand, 41258992 - 41259027
Alignment:
Q  379 aggacaatgcataatatatgcaaggttcagagtttga 415  Q
    |||||||||||||||||||||||||||| ||||||||    
T  41258992 aggacaatgcataatatatgcaaggttc-gagtttga 41259027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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