View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0589_high_15 (Length: 407)
Name: NF0589_high_15
Description: NF0589
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0589_high_15 |
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Alignment Details
Target: chr2 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 13 - 313
Target Start/End: Complemental strand, 8768307 - 8768007
Alignment:
| Q |
13 |
aatatccagcaagtgtaacaacgttcggatgccgcaagcgtgacatattagaaatggcttcaagaaaattgtcttcctcttgtaaagacagtgctgcgtt |
112 |
Q |
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| T |
8768307 |
aatatccagcaagtgtaacaacgttcggatgccgcaagcgtgacatattagaaatggcttcaagaaaattgtcttcctcttgtaaagacagtgctgcgtt |
8768208 |
T |
|
| Q |
113 |
gtcaatcttcttgacggccataatctaaacaaaaggagaaacttgaaattaatagaatatttgagtatttataaattctcaaacaaacagtatgaaggtg |
212 |
Q |
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| T |
8768207 |
gtcaatcttcttgacggccataatctaaacaaaaggaaaaacttgaaattaatagaatatttgagtatttataaattctcaaacaaacagtatgaaggtg |
8768108 |
T |
|
| Q |
213 |
gataacaaatgcaacattaaaagtttaccttcccgtttgggaattcagccttgtaaactcgaccaagagaaccttcaccaataataaattcttgactgaa |
312 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8768107 |
gataacaaatgcaacattaaaagtttaccttcccatttgggaattcagccttgtaaactcgaccaagagaaccttcaccaataataaattcttgactgaa |
8768008 |
T |
|
| Q |
313 |
g |
313 |
Q |
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| T |
8768007 |
g |
8768007 |
T |
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