View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0589_low_53 (Length: 269)

Name: NF0589_low_53
Description: NF0589
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0589_low_53
NF0589_low_53
[»] chr3 (62 HSPs)
chr3 (37-247)||(54685415-54685625)
chr3 (37-247)||(33341812-33342022)
chr3 (37-235)||(7853913-7854111)
chr3 (72-242)||(17956103-17956274)
chr3 (59-242)||(30152893-30153078)
chr3 (68-242)||(45581591-45581767)
chr3 (80-242)||(54038243-54038406)
chr3 (91-236)||(16996176-16996322)
chr3 (87-236)||(19570805-19570954)
chr3 (37-176)||(19946629-19946768)
chr3 (96-236)||(50112168-50112309)
chr3 (87-233)||(317628-317775)
chr3 (96-233)||(16182065-16182203)
chr3 (87-236)||(22144389-22144539)
chr3 (80-242)||(3992522-3992686)
chr3 (112-236)||(12349847-12349970)
chr3 (80-242)||(23492346-23492509)
chr3 (116-242)||(16261463-16261589)
chr3 (87-242)||(53771020-53771177)
chr3 (87-236)||(13817495-13817642)
chr3 (87-236)||(35123677-35123826)
chr3 (116-236)||(6154448-6154567)
chr3 (116-242)||(2844201-2844327)
chr3 (87-236)||(14298402-14298551)
chr3 (87-236)||(14304029-14304178)
chr3 (87-236)||(53898572-53898721)
chr3 (112-236)||(6146863-6146986)
chr3 (87-236)||(17523006-17523156)
chr3 (87-242)||(38167894-38168050)
chr3 (37-176)||(47784924-47785064)
chr3 (87-236)||(14295418-14295569)
chr3 (92-236)||(17100638-17100783)
chr3 (92-236)||(17101323-17101468)
chr3 (87-233)||(11329081-11329228)
chr3 (73-214)||(17139474-17139616)
chr3 (80-236)||(54423986-54424142)
chr3 (80-214)||(14528151-14528286)
chr3 (37-118)||(9303343-9303425)
chr3 (87-227)||(12560362-12560503)
chr3 (99-181)||(28558198-28558282)
chr3 (92-236)||(19260956-19261101)
chr3 (87-236)||(14301045-14301196)
chr3 (80-206)||(55440996-55441123)
chr3 (92-236)||(12349656-12349806)
chr3 (64-214)||(12488865-12489017)
chr3 (87-227)||(14059339-14059480)
chr3 (74-213)||(17204667-17204807)
chr3 (117-228)||(8631801-8631912)
chr3 (183-236)||(34439460-34439513)
chr3 (114-233)||(17938582-17938701)
chr3 (65-191)||(38811170-38811297)
chr3 (64-176)||(1990759-1990873)
chr3 (65-146)||(17960520-17960602)
chr3 (73-189)||(9590918-9591035)
chr3 (59-214)||(12952915-12953072)
chr3 (114-214)||(16880131-16880231)
chr3 (93-214)||(15876054-15876176)
chr3 (87-214)||(3576577-3576705)
chr3 (65-176)||(34559857-34559969)
chr3 (206-236)||(28558271-28558301)
chr3 (112-236)||(11061122-11061247)
chr3 (40-76)||(8901257-8901293)
[»] chr5 (28 HSPs)
chr5 (38-236)||(11583982-11584184)
chr5 (80-242)||(2031783-2031946)
chr5 (98-242)||(11342675-11342821)
chr5 (59-236)||(1168321-1168500)
chr5 (87-236)||(28261501-28261651)
chr5 (96-236)||(21397078-21397222)
chr5 (80-242)||(21204898-21205062)
chr5 (68-236)||(20712036-20712206)
chr5 (87-235)||(21646857-21647006)
chr5 (87-236)||(11337303-11337452)
chr5 (87-236)||(24475563-24475708)
chr5 (87-236)||(4865242-4865393)
chr5 (80-242)||(21650668-21650831)
chr5 (115-235)||(21906729-21906846)
chr5 (37-119)||(16105573-16105656)
chr5 (37-119)||(109075-109158)
chr5 (112-236)||(24183249-24183370)
chr5 (73-227)||(19405503-19405658)
chr5 (97-206)||(23466447-23466557)
chr5 (65-233)||(7728378-7728547)
chr5 (64-233)||(3673818-3673989)
chr5 (64-227)||(23493875-23494040)
chr5 (65-214)||(21616974-21617124)
chr5 (38-76)||(24225596-24225634)
chr5 (81-233)||(19862183-19862336)
chr5 (73-148)||(16595474-16595550)
chr5 (65-148)||(32966352-32966436)
chr5 (64-214)||(6456580-6456732)
[»] scaffold1867 (1 HSPs)
scaffold1867 (37-236)||(75-274)
[»] scaffold0833 (1 HSPs)
scaffold0833 (37-214)||(3230-3407)
[»] chr6 (30 HSPs)
chr6 (37-242)||(18583264-18583453)
chr6 (72-242)||(35015276-35015447)
chr6 (72-236)||(19983416-19983581)
chr6 (87-235)||(25744331-25744480)
chr6 (81-242)||(26089710-26089871)
chr6 (96-236)||(32898779-32898920)
chr6 (37-176)||(18823573-18823712)
chr6 (80-242)||(18002615-18002777)
chr6 (80-242)||(15742339-15742505)
chr6 (37-176)||(18839428-18839567)
chr6 (87-242)||(23994902-23995059)
chr6 (112-236)||(22440941-22441064)
chr6 (87-233)||(31628248-31628395)
chr6 (80-235)||(18777119-18777275)
chr6 (112-236)||(13014826-13014949)
chr6 (37-119)||(4991002-4991085)
chr6 (59-233)||(18398890-18399065)
chr6 (119-233)||(18432656-18432770)
chr6 (96-233)||(16086007-16086144)
chr6 (72-233)||(18381803-18381965)
chr6 (99-236)||(18570271-18570409)
chr6 (37-148)||(17083383-17083496)
chr6 (65-233)||(22361885-22362054)
chr6 (96-214)||(25367376-25367495)
chr6 (87-233)||(16106502-16106643)
chr6 (87-212)||(28195234-28195360)
chr6 (73-178)||(18629786-18629892)
chr6 (87-146)||(15740209-15740269)
chr6 (68-214)||(25651197-25651345)
chr6 (65-148)||(25919571-25919655)
[»] scaffold0120 (2 HSPs)
scaffold0120 (37-236)||(21442-21642)
scaffold0120 (37-236)||(31141-31341)
[»] scaffold0158 (2 HSPs)
scaffold0158 (37-236)||(24890-25088)
scaffold0158 (106-236)||(25212-25341)
[»] chr8 (38 HSPs)
chr8 (80-242)||(41506928-41507091)
chr8 (72-242)||(24716981-24717152)
chr8 (99-242)||(39115267-39115411)
chr8 (97-233)||(41246648-41246785)
chr8 (87-236)||(19993171-19993321)
chr8 (118-236)||(22234920-22235038)
chr8 (87-236)||(20573309-20573458)
chr8 (112-236)||(37611675-37611798)
chr8 (68-236)||(20481565-20481735)
chr8 (80-235)||(274416-274572)
chr8 (80-235)||(641277-641433)
chr8 (80-235)||(827083-827239)
chr8 (68-242)||(16039000-16039176)
chr8 (96-233)||(20647949-20648087)
chr8 (96-233)||(20654025-20654163)
chr8 (73-227)||(39446892-39447046)
chr8 (65-227)||(38533607-38533770)
chr8 (65-214)||(5854572-5854722)
chr8 (87-152)||(20567200-20567265)
chr8 (87-176)||(20567335-20567424)
chr8 (87-176)||(20573528-20573617)
chr8 (112-188)||(25122543-25122618)
chr8 (99-225)||(21680994-21681121)
chr8 (98-169)||(29759933-29760005)
chr8 (65-214)||(22735977-22736127)
chr8 (72-233)||(23837163-23837325)
chr8 (65-214)||(26011452-26011602)
chr8 (64-214)||(33528383-33528533)
chr8 (116-242)||(24385871-24385988)
chr8 (87-148)||(15969799-15969860)
chr8 (180-233)||(20561751-20561804)
chr8 (65-214)||(15933256-15933406)
chr8 (64-189)||(23226240-23226368)
chr8 (72-143)||(21198362-21198434)
chr8 (64-190)||(23149736-23149865)
chr8 (73-214)||(27233206-27233348)
chr8 (64-214)||(18261610-18261762)
chr8 (64-178)||(22742717-22742833)
[»] chr7 (37 HSPs)
chr7 (80-242)||(111388-111550)
chr7 (37-233)||(7284180-7284376)
chr7 (68-242)||(32494165-32494341)
chr7 (98-242)||(126406-126551)
chr7 (87-236)||(39046740-39046890)
chr7 (80-236)||(11287390-11287547)
chr7 (87-242)||(42056408-42056565)
chr7 (87-236)||(35094797-35094946)
chr7 (116-242)||(2190305-2190431)
chr7 (80-242)||(2028893-2029057)
chr7 (87-236)||(12758968-12759117)
chr7 (92-242)||(3049568-3049719)
chr7 (87-236)||(15822548-15822698)
chr7 (80-236)||(3894998-3895155)
chr7 (87-233)||(26070384-26070531)
chr7 (87-233)||(26094171-26094318)
chr7 (87-214)||(45452305-45452432)
chr7 (112-236)||(47289788-47289911)
chr7 (80-236)||(12248237-12248395)
chr7 (96-236)||(16570122-16570264)
chr7 (96-236)||(16595398-16595540)
chr7 (112-236)||(44865234-44865360)
chr7 (72-242)||(1937131-1937290)
chr7 (73-214)||(49047813-49047955)
chr7 (73-236)||(13274753-13274918)
chr7 (68-236)||(12369957-12370127)
chr7 (37-190)||(14272049-14272203)
chr7 (112-236)||(143652-143769)
chr7 (72-242)||(17224048-17224220)
chr7 (65-214)||(16915067-16915217)
chr7 (65-214)||(48356602-48356752)
chr7 (64-242)||(13377485-13377666)
chr7 (64-143)||(4446168-4446249)
chr7 (64-143)||(14935319-14935400)
chr7 (64-143)||(15362912-15362993)
chr7 (129-236)||(13863046-13863154)
chr7 (65-148)||(34241393-34241477)
[»] scaffold0310 (2 HSPs)
scaffold0310 (37-233)||(234-430)
scaffold0310 (37-113)||(6603-6679)
[»] scaffold0686 (1 HSPs)
scaffold0686 (72-242)||(6202-6373)
[»] scaffold0184 (1 HSPs)
scaffold0184 (72-242)||(31399-31570)
[»] scaffold0078 (1 HSPs)
scaffold0078 (72-242)||(41274-41445)
[»] scaffold0039 (2 HSPs)
scaffold0039 (80-242)||(12639-12802)
scaffold0039 (80-213)||(19049-19183)
[»] chr4 (37 HSPs)
chr4 (59-242)||(14951713-14951898)
chr4 (72-235)||(25119333-25119498)
chr4 (87-236)||(53704850-53705000)
chr4 (72-242)||(5682646-5682817)
chr4 (96-240)||(55376710-55376855)
chr4 (72-236)||(34395222-34395387)
chr4 (87-240)||(23270047-23270201)
chr4 (87-236)||(44055895-44056045)
chr4 (87-236)||(16732149-16732299)
chr4 (96-236)||(44346816-44346957)
chr4 (99-236)||(21959580-21959718)
chr4 (87-234)||(53907818-53907963)
chr4 (128-236)||(30457925-30458033)
chr4 (112-236)||(820033-820153)
chr4 (87-242)||(15272431-15272588)
chr4 (128-236)||(8872588-8872699)
chr4 (37-139)||(16522748-16522851)
chr4 (87-236)||(12837317-12837466)
chr4 (87-236)||(30232613-30232763)
chr4 (80-214)||(18494467-18494602)
chr4 (112-235)||(45458973-45459096)
chr4 (96-227)||(13809636-13809768)
chr4 (37-139)||(9295624-9295727)
chr4 (96-213)||(27960961-27961078)
chr4 (37-214)||(7185983-7186159)
chr4 (112-233)||(52265628-52265749)
chr4 (65-148)||(37957230-37957314)
chr4 (64-233)||(15044784-15044955)
chr4 (65-174)||(7964890-7965000)
chr4 (64-242)||(15109459-15109640)
chr4 (65-213)||(18276392-18276541)
chr4 (72-148)||(47535251-47535328)
chr4 (65-148)||(19821981-19822065)
chr4 (64-233)||(41256489-41256660)
chr4 (166-236)||(10104382-10104452)
chr4 (72-148)||(14901197-14901274)
chr4 (164-236)||(15675221-15675293)
[»] scaffold0034 (3 HSPs)
scaffold0034 (87-242)||(79844-80000)
scaffold0034 (112-236)||(46171-46295)
scaffold0034 (112-236)||(40664-40788)
[»] chr1 (22 HSPs)
chr1 (80-242)||(21859984-21860147)
chr1 (59-242)||(22366970-22367154)
chr1 (59-242)||(15861545-15861728)
chr1 (77-242)||(44035090-44035255)
chr1 (87-236)||(49967631-49967780)
chr1 (87-236)||(35522436-35522585)
chr1 (87-236)||(41212049-41212202)
chr1 (87-236)||(21718209-21718358)
chr1 (112-236)||(22403227-22403350)
chr1 (68-236)||(35054716-35054886)
chr1 (80-236)||(27329872-27330026)
chr1 (73-212)||(51627805-51627945)
chr1 (65-148)||(27674755-27674838)
chr1 (112-214)||(9784239-9784341)
chr1 (66-148)||(22829629-22829712)
chr1 (65-214)||(17608886-17609036)
chr1 (65-148)||(19603055-19603139)
chr1 (65-145)||(38033882-38033962)
chr1 (72-233)||(20177140-20177302)
chr1 (166-233)||(9784184-9784248)
chr1 (73-233)||(21194980-21195141)
chr1 (65-227)||(37233986-37234149)
[»] scaffold0116 (1 HSPs)
scaffold0116 (72-217)||(30056-30202)
[»] scaffold0016 (4 HSPs)
scaffold0016 (72-242)||(162297-162469)
scaffold0016 (96-236)||(164204-164345)
scaffold0016 (72-242)||(166383-166547)
scaffold0016 (72-176)||(116690-116795)
[»] chr2 (27 HSPs)
chr2 (72-242)||(22274688-22274858)
chr2 (87-236)||(23836822-23836972)
chr2 (87-236)||(32465838-32465988)
chr2 (72-242)||(22283921-22284091)
chr2 (68-236)||(25876036-25876206)
chr2 (80-242)||(9653015-9653179)
chr2 (37-190)||(19433495-19433649)
chr2 (91-242)||(21274168-21274320)
chr2 (87-240)||(6879417-6879571)
chr2 (87-236)||(28974029-28974179)
chr2 (87-236)||(271151-271300)
chr2 (87-235)||(4448251-4448399)
chr2 (68-233)||(36890805-36890972)
chr2 (72-236)||(25601989-25602154)
chr2 (87-199)||(27261786-27261899)
chr2 (37-119)||(24826961-24827044)
chr2 (73-213)||(22579999-22580140)
chr2 (37-139)||(25212977-25213081)
chr2 (65-191)||(3403-3529)
chr2 (73-236)||(24571408-24571572)
chr2 (37-233)||(43645824-43646020)
chr2 (68-233)||(67952-68119)
chr2 (65-148)||(722353-722437)
chr2 (64-105)||(24884643-24884684)
chr2 (68-191)||(23821767-23821892)
chr2 (68-191)||(23830846-23830971)
chr2 (164-236)||(24341521-24341593)
[»] scaffold0342 (1 HSPs)
scaffold0342 (77-242)||(570-736)
[»] scaffold0021 (3 HSPs)
scaffold0021 (97-236)||(132367-132507)
scaffold0021 (80-236)||(11660-11818)
scaffold0021 (120-235)||(88289-88404)
[»] scaffold0091 (2 HSPs)
scaffold0091 (87-236)||(32183-32333)
scaffold0091 (87-236)||(41970-42120)
[»] scaffold0001 (2 HSPs)
scaffold0001 (87-236)||(70739-70889)
scaffold0001 (87-240)||(60787-60940)
[»] scaffold0480 (2 HSPs)
scaffold0480 (87-236)||(5363-5513)
scaffold0480 (96-236)||(8998-9140)
[»] scaffold0008 (1 HSPs)
scaffold0008 (87-236)||(22671-22821)
[»] scaffold0597 (1 HSPs)
scaffold0597 (80-242)||(1097-1261)
[»] scaffold0251 (2 HSPs)
scaffold0251 (80-242)||(13505-13669)
scaffold0251 (87-242)||(21479-21636)
[»] scaffold0175 (1 HSPs)
scaffold0175 (80-242)||(14921-15085)
[»] scaffold0396 (1 HSPs)
scaffold0396 (96-236)||(11825-11965)
[»] scaffold0673 (2 HSPs)
scaffold0673 (87-236)||(6962-7115)
scaffold0673 (87-236)||(939-1089)
[»] scaffold0234 (1 HSPs)
scaffold0234 (80-242)||(17523-17686)
[»] scaffold0035 (2 HSPs)
scaffold0035 (80-233)||(109582-109736)
scaffold0035 (80-235)||(118081-118237)
[»] scaffold0014 (2 HSPs)
scaffold0014 (96-233)||(85321-85459)
scaffold0014 (80-242)||(159275-159436)
[»] scaffold0011 (2 HSPs)
scaffold0011 (87-236)||(254931-255081)
scaffold0011 (87-236)||(261537-261687)
[»] scaffold0044 (1 HSPs)
scaffold0044 (96-236)||(38287-38428)
[»] scaffold0083 (2 HSPs)
scaffold0083 (87-236)||(14857-15004)
scaffold0083 (87-177)||(14197-14288)
[»] scaffold0077 (1 HSPs)
scaffold0077 (68-236)||(15588-15761)
[»] scaffold0610 (1 HSPs)
scaffold0610 (87-236)||(693-843)
[»] scaffold0240 (1 HSPs)
scaffold0240 (96-236)||(7561-7699)
[»] scaffold0032 (2 HSPs)
scaffold0032 (80-242)||(55553-55717)
scaffold0032 (65-152)||(93973-94061)
[»] scaffold0012 (1 HSPs)
scaffold0012 (72-236)||(253106-253271)
[»] scaffold0190 (1 HSPs)
scaffold0190 (73-236)||(9903-10067)
[»] scaffold0465 (1 HSPs)
scaffold0465 (80-233)||(10094-10248)
[»] scaffold0359 (2 HSPs)
scaffold0359 (96-233)||(1306-1444)
scaffold0359 (128-236)||(11771-11876)
[»] scaffold0195 (1 HSPs)
scaffold0195 (87-236)||(635-785)
[»] scaffold0706 (1 HSPs)
scaffold0706 (82-242)||(6662-6823)
[»] scaffold0338 (1 HSPs)
scaffold0338 (80-236)||(8960-9117)
[»] scaffold0004 (2 HSPs)
scaffold0004 (80-242)||(193607-193770)
scaffold0004 (87-242)||(186645-186801)
[»] scaffold0574 (1 HSPs)
scaffold0574 (80-242)||(9626-9789)
[»] scaffold0037 (2 HSPs)
scaffold0037 (80-242)||(94948-95111)
scaffold0037 (80-236)||(24845-25002)
[»] scaffold0022 (3 HSPs)
scaffold0022 (87-236)||(112662-112809)
scaffold0022 (73-214)||(109556-109698)
scaffold0022 (65-227)||(103048-103211)
[»] scaffold0150 (2 HSPs)
scaffold0150 (37-143)||(28466-28573)
scaffold0150 (37-85)||(21637-21685)
[»] scaffold0025 (1 HSPs)
scaffold0025 (68-236)||(146561-146731)
[»] scaffold0160 (2 HSPs)
scaffold0160 (98-236)||(12-151)
scaffold0160 (98-176)||(3510-3589)
[»] scaffold1164 (1 HSPs)
scaffold1164 (59-210)||(1332-1485)
[»] scaffold0117 (1 HSPs)
scaffold0117 (87-233)||(11688-11834)
[»] scaffold0075 (1 HSPs)
scaffold0075 (72-233)||(4906-5068)
[»] scaffold0068 (2 HSPs)
scaffold0068 (112-236)||(48154-48277)
scaffold0068 (112-236)||(61602-61725)
[»] scaffold0028 (3 HSPs)
scaffold0028 (37-139)||(130486-130589)
scaffold0028 (167-236)||(89586-89655)
scaffold0028 (87-214)||(79519-79647)
[»] scaffold0095 (1 HSPs)
scaffold0095 (73-227)||(33854-34008)
[»] scaffold0303 (1 HSPs)
scaffold0303 (82-242)||(147-308)
[»] scaffold0031 (3 HSPs)
scaffold0031 (73-211)||(31010-31149)
scaffold0031 (169-227)||(70676-70734)
scaffold0031 (65-148)||(97403-97487)
[»] scaffold0103 (1 HSPs)
scaffold0103 (112-233)||(33668-33789)
[»] scaffold0092 (1 HSPs)
scaffold0092 (87-206)||(3299-3419)
[»] scaffold0740 (2 HSPs)
scaffold0740 (172-235)||(4351-4414)
scaffold0740 (87-152)||(4287-4353)
[»] scaffold0122 (1 HSPs)
scaffold0122 (80-178)||(24372-24471)
[»] scaffold0053 (1 HSPs)
scaffold0053 (72-233)||(76967-77129)
[»] scaffold0009 (1 HSPs)
scaffold0009 (65-214)||(69415-69565)
[»] scaffold0554 (1 HSPs)
scaffold0554 (96-212)||(1905-2022)
[»] scaffold0080 (1 HSPs)
scaffold0080 (65-176)||(43975-44087)
[»] scaffold1272 (1 HSPs)
scaffold1272 (68-233)||(270-436)
[»] scaffold0231 (1 HSPs)
scaffold0231 (40-97)||(12990-13048)
[»] scaffold0589 (1 HSPs)
scaffold0589 (87-150)||(7814-7878)
[»] scaffold0700 (1 HSPs)
scaffold0700 (65-227)||(2483-2646)
[»] scaffold0483 (1 HSPs)
scaffold0483 (68-153)||(6622-6708)
[»] scaffold0013 (1 HSPs)
scaffold0013 (72-148)||(35444-35520)
[»] scaffold0162 (1 HSPs)
scaffold0162 (72-203)||(7175-7307)
[»] scaffold0017 (1 HSPs)
scaffold0017 (37-77)||(12694-12734)
[»] scaffold0090 (1 HSPs)
scaffold0090 (37-72)||(3392-3427)
[»] scaffold0244 (1 HSPs)
scaffold0244 (80-150)||(22715-22786)
[»] scaffold0243 (1 HSPs)
scaffold0243 (64-233)||(2436-2607)
[»] scaffold0006 (1 HSPs)
scaffold0006 (65-214)||(197392-197545)
[»] scaffold1734 (1 HSPs)
scaffold1734 (72-129)||(1364-1422)
[»] scaffold0010 (1 HSPs)
scaffold0010 (65-206)||(30978-31120)
[»] scaffold0020 (1 HSPs)
scaffold0020 (64-176)||(107967-108080)


Alignment Details
Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 37 - 247
Target Start/End: Complemental strand, 54685625 - 54685415
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 136  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||    
T  54685625 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaacagcaactcatttctcaacaacaatcatgaatcatgcaaatccaagc 54685526  T
Q  137 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54685525 catgaattatcatcaaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 54685426  T
Q  237 tataatctacc 247  Q
     ||||| ||||    
T  54685425 cataatttacc 54685415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 37 - 247
Target Start/End: Original strand, 33341812 - 33342022
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 136  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33341812 acataatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 33341911  T
Q  137 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33341912 catgaattatcatcaaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcataattcatcaacaaccatgcataattcaccaattgag 33342011  T
Q  237 tataatctacc 247  Q
     ||||| ||||    
T  33342012 cataatttacc 33342022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 37 - 235
Target Start/End: Original strand, 7853913 - 7854111
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 136  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  7853913 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgattcatgcaaacccaagc 7854012  T
Q  137 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattga 235  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7854013 catgaattatcatcaaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattga 7854111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 72 - 242
Target Start/End: Complemental strand, 17956274 - 17956103
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||| ||||||||| |||| ||||  |||||||||||||||| |||||||||||||||||||||| |||| || ||||||||  ||||||||||||||||    
T  17956274 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagtcatgtatcatcatcaacaatatgactaaacaaca 17956175  T
Q  171 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17956174 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataatacaccaattgagtataat 17956103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 59 - 242
Target Start/End: Original strand, 30152893 - 30153078
Alignment:
Q  59 tcattatcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 156  Q
    |||| ||||||||||||| || ||| || |||| ||||  |||||||||||||||| ||||||||||||||||||||||||||  || ||||||||  ||    
T  30152893 tcataatcaacccattttcaccaaaacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatatatcatcatcaacaat 30152992  T
Q  157 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30152993 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 30153078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 68 - 242
Target Start/End: Original strand, 45581591 - 45581767
Alignment:
Q  68 acccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 165  Q
    ||||||||| || |||||| |||| |||| | ||||||||||||||| | |||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  45581591 acccattttcaccaaaccaacaacaacaatttatttctcaacaacaaattatgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaa 45581690  T
Q  166 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  45581691 caacaacaacaaccattaatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcataat 45581767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 80 - 242
Target Start/End: Complemental strand, 54038406 - 54038243
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| |||| | |||||| |||||||| | |||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  54038406 aaaccaacaacaacaatttatttcttaacaacaaattatgaatcatgcatacccaagccatgaattatcatcaactatatgactaaacaacaacaacaac 54038307  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||    
T  54038306 cattaatcatgaaacatatcacatttcatcaacaaccatgcataattcaccaatttagcataat 54038243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 91 - 236
Target Start/End: Complemental strand, 16996322 - 16996176
Alignment:
Q  91 cacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatg 189  Q
    ||||||||||||||||||||||| | | |||| |||||||| |||||||||||||||||||||  | |||||||||||||||||||||| ||||||||||    
T  16996322 cacaactcatttctcaacaacaaaccaagaattatgcaaactcaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgatcatg 16996223  T
Q  190 aaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  16996222 aaacatatcacaattcatcaacaacaatgcataattcaccaattgag 16996176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 19570954 - 19570805
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 186  Q
    |||| ||| |||||||||||||||||| || |||| |||||||| |||||||||||||||||||||  | |||||||||||||||||||||| |||||||    
T  19570954 caacaacatctcatttctcaacaacaaccaagaattatgcaaactcaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgatc 19570855  T
Q  187 atgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  19570854 atgaaacttatcacaattcaccaacaacaatgcataattcaccaattgag 19570805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 37 - 176
Target Start/End: Original strand, 19946629 - 19946768
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 136  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19946629 acatcatcaaaatcaaacttctatattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 19946728  T
Q  137 catgaattatcatcaaacatatgactaaacaacaacaaca 176  Q
    |||| |||||||||||  | |||||  | |||||||||||    
T  19946729 catggattatcatcaacaacatgacatatcaacaacaaca 19946768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 96 - 236
Target Start/End: Complemental strand, 50112309 - 50112168
Alignment:
Q  96 ctcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 194  Q
    |||||||||||| ||||| | ||||||||||||||| |||||||||||||||||||||  | |||||||||||||||||||| | ||||||||||||||     
T  50112309 ctcatttctcaaaaacaaaccatgaatcatgcaaactcaagccatgaattatcatcaacaacatgactaaacaacaacaacatcaattgatcatgaaact 50112210  T
Q  195 tatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  50112209 tatcacaattcatcaacaacaatgcataattcaccaattgag 50112168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 87 - 233
Target Start/End: Complemental strand, 317775 - 317628
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||| ||||||| | | |||| || ||||| |||||||||||||||||||||  | |||||||||||||||||||||| ||||||    
T  317775 caacaacatctcatttctccacaacaaaccaagaattatacaaactcaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgat 317676  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  317675 catgaaacatatcacaattcatcaacaacaatgcataattcaccaatt 317628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 96 - 233
Target Start/End: Complemental strand, 16182203 - 16182065
Alignment:
Q  96 ctcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 194  Q
    |||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||  | ||||||||| |||||||||||| ||||||||| ||||     
T  16182203 ctcatttctcaacaacaatccaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaaaaacaacaacaacaattgatcattaaact 16182104  T
Q  195 tatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  16182103 tatcacaattcatcaacgacaatgcataattcaccaatt 16182065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 22144539 - 22144389
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| ||||||||||||| |||| | ||||||||||||||||||||||||| |||||||||||  | ||| || ||||||||||||||| ||||||    
T  22144539 caacaacatctcatttctcaaccacaaaccatgaatcatgcaaacccaagccatgtattatcatcaacaacatggcttaacaacaacaacaacaattgat 22144440  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||| |||||||||||||||||||| ||||||| |||||||||||||    
T  22144439 catgaaacttatcacaattcatcaacaacaatgcatacttcaccaattgag 22144389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 80 - 242
Target Start/End: Original strand, 3992522 - 3992686
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa 177  Q
    |||||| |||| |||||| ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||| |  | || ||| |||||||||||||     
T  3992522 aaaccaacaacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 3992621  T
Q  178 ccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  3992622 ctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataat 3992686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 12349970 - 12349847
Alignment:
Q  112 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaac 211  Q
    ||||||||||||||||| |||||||||||||||||||||||  | |||||| ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  12349970 aatcatgaatcatgcaa-cccaagccatgaattatcatcaacaacatgacttaacaacaacaacaacaattgatcatgaaacttatcacaattcatcaac 12349872  T
Q  212 aaccatgcataattcaccaattgag 236  Q
     || |||||||||||||||||||||    
T  12349871 tacgatgcataattcaccaattgag 12349847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 80 - 242
Target Start/End: Original strand, 23492346 - 23492509
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| |||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| |    
T  23492346 aaaccaacaacaacaacttatttcacaacaacaaactatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatc 23492445  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
     |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||    
T  23492446 tattgatcatgaaacatatcacaattcatcaacaaccatccataattcaccatttgagcataat 23492509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 16261463 - 16261589
Alignment:
Q  116 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaacc 215  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  16261463 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaacc 16261562  T
Q  216 atgcataattcaccaattgagtataat 242  Q
    ||||||||||||||||||||| |||||    
T  16261563 atgcataattcaccaattgagcataat 16261589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 53771020 - 53771177
Alignment:
Q  87 caaccacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattga 184  Q
    |||| |||||| ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||  |  | || ||| ||||||||||||| | |||||    
T  53771020 caacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacatctattga 53771119  T
Q  185 tcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  53771120 tcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 53771177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 13817495 - 13817642
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||| | | |||| ||||||||||||||||||||||||||||||  | |||||||||||   |||||||| ||||||    
T  13817495 caacaacatctcatttctcaacaacaaaccaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaaca---acaacaacaattgat 13817591  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  13817592 catgaaacttatcacaattcaccaacaacaatgcataattcaccaattgag 13817642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 35123677 - 35123826
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 186  Q
    |||| ||| ||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||  | |||||  | ||||||||||| | |||||||    
T  35123677 caacaacatctcatttctcaacacaaatcatgaatcatgcaaacccaaaccatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatc 35123776  T
Q  187 atgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||| ||||||||||||  |||||| | |||||||||||||||||||    
T  35123777 atgaaacttatcacaattcaataacaacaaagcataattcaccaattgag 35123826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 116 - 236
Target Start/End: Complemental strand, 6154567 - 6154448
Alignment:
Q  116 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaacc 215  Q
    ||||||||||||| |||||||||||||||||||||||  | |||||| ||||| ||||||||| |||||||||||||| |||||||||||||||| |||     
T  6154567 atgaatcatgcaa-cccaagccatgaattatcatcaacaacatgacttaacaataacaacaacaattgatcatgaaacttatcacaattcatcaataaca 6154469  T
Q  216 atgcataattcaccaattgag 236  Q
    |||||||||||||||||||||    
T  6154468 atgcataattcaccaattgag 6154448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 2844201 - 2844327
Alignment:
Q  116 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaacc 215  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | |||||||||||||| |||||||||||||||| ||||    
T  2844201 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaagaacc 2844300  T
Q  216 atgcataattcaccaattgagtataat 242  Q
    ||||||||||||||||||||| |||||    
T  2844301 atgcataattcaccaattgagcataat 2844327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 14298402 - 14298551
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 186  Q
    |||| ||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  | |||||  |  || ||||||| | |||||||    
T  14298402 caacaacatctcatttctcaacacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatattaataacaacatcaattgatc 14298501  T
Q  187 atgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||| |||||||||||  ||||||| | |||||||||||||||||||    
T  14298502 atgaaacttatcacaattcgacaacaacaaagcataattcaccaattgag 14298551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 14304029 - 14304178
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 186  Q
    |||| ||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  | |||||  |  || ||||||| | |||||||    
T  14304029 caacaacatctcatttctcaacacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatattaataacaacatcaattgatc 14304128  T
Q  187 atgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||| |||||||||||  ||||||| | |||||||||||||||||||    
T  14304129 atgaaacttatcacaattcgacaacaacaaagcataattcaccaattgag 14304178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 53898721 - 53898572
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 186  Q
    |||| ||| ||||||||||||||  ||||||||||| ||||||||||||||||||||||||| |||  | |||||  | |||||||||||   |||||||    
T  53898721 caacaacatctcatttctcaacataaatcatgaatcttgcaaacccaagccatgaattatcaccaacaacatgacatatcaacaacaacattaattgatc 53898622  T
Q  187 atgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||| ||||||||| || ||||||| |||||||||||||||||||||    
T  53898621 atgaaacttatcacaatgcaacaacaacaatgcataattcaccaattgag 53898572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 6146986 - 6146863
Alignment:
Q  112 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaac 211  Q
    |||||||||||||| |||||||||||||||||||| |||||  | |||||| |||||||||| |||| ||||| |||||||| |||||||||||||||||    
T  6146986 aatcatgaatcatg-aaacccaagccatgaattattatcaacaacatgacttaacaacaacagcaacaattgaccatgaaacttatcacaattcatcaac 6146888  T
Q  212 aaccatgcataattcaccaattgag 236  Q
    ||| |||||| ||||||||||||||    
T  6146887 aacaatgcatgattcaccaattgag 6146863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 17523156 - 17523006
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaa-acatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| ||||||||||||||  |||||| |||||||||||||||||||||||||||||||||| | |  ||||| | ||||||||||| | |||| |    
T  17523156 caacaacatctcatttctcaacacaaatcataaatcatgcaaacccaagccatgaattatcatcaacaaaattgacttagcaacaacaacatcaattggt 17523057  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||| |||||||||||||||| |||   |||||||||||||||||||    
T  17523056 catgaaacttatcacaattcatcaataacatagcataattcaccaattgag 17523006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 38167894 - 38168050
Alignment:
Q  87 caaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| |||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | ||||||    
T  38167894 caacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaacaacatctattgat 38167993  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||||||| ||| ||||||||||||||||   ||||||||||||||||||| |||||    
T  38167994 catgaaacttattacaattcatcaacaacatagcataattcaccaattgagcataat 38168050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 37 - 176
Target Start/End: Complemental strand, 47785064 - 47784924
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaag 135  Q
    ||||||||||||||||||||||||||||||||||||||||||| || || |||| ||||||||||||||| |||| |||||||||| ||| | |||||||    
T  47785064 acatcatcaaaatcaaacttcttcattatcaacccattttacagaatcaccaacaacaactcatttctcaccaacaaatcatgaattatgaacacccaag 47784965  T
Q  136 ccatgaattatcatcaaacatatgactaaacaacaacaaca 176  Q
    |||||||| || | |||  | || ||| |||||||||||||    
T  47784964 ccatgaatcattaacaacaacatcacttaacaacaacaaca 47784924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 14295418 - 14295569
Alignment:
Q  87 caaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  | || ||| |  |||||||||| | ||||||    
T  14295418 caacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatcacttagaaacaacaacatcaattgat 14295517  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattc-accaattgag 236  Q
    |||||| | |||||||||||| |||||||   ||||||||| ||||||||||    
T  14295518 catgaatcttatcacaattcaacaacaacatagcataattcaaccaattgag 14295569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 92 - 236
Target Start/End: Original strand, 17100638 - 17100783
Alignment:
Q  92 acaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatga 190  Q
    |||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| |||| |  | || ||| |||||||| |||| | |||||||||||    
T  17100638 acaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaataacatcaattgatcatga 17100737  T
Q  191 aacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||| ||||||||||||||||||||   |||||||||||||||||||    
T  17100738 aacttatcacaattcatcaacaacatagcataattcaccaattgag 17100783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 92 - 236
Target Start/End: Original strand, 17101323 - 17101468
Alignment:
Q  92 acaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatga 190  Q
    |||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| |||| |  | || ||| |||||||| |||| | |||||||||||    
T  17101323 acaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaataacatcaattgatcatga 17101422  T
Q  191 aacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||| ||||||||||||||||||||   |||||||||||||||||||    
T  17101423 aacttatcacaattcatcaacaacatagcataattcaccaattgag 17101468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 87 - 233
Target Start/End: Complemental strand, 11329228 - 11329081
Alignment:
Q  87 caaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| ||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||  | || ||| | ||||||||||| | ||||||    
T  11329228 caacaacatctcatttctcatcaacaaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattgat 11329129  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    |||||| | |||||||||||| |||||||   |||||||||| |||||    
T  11329128 catgaatcttatcacaattcaacaacaacatagcataattcaacaatt 11329081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 73 - 214
Target Start/End: Original strand, 17139474 - 17139616
Alignment:
Q  73 ttttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 171  Q
    |||||| |||| | |||| ||| |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||  | || ||| | ||||||    
T  17139474 ttttaccaaactaccaacaacatctcatttcgcaacaacaaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacttagcaacaa 17139573  T
Q  172 caacaaccattgatcatgaaacatatcacaattcatcaacaac 214  Q
    ||||| | |||||||||||| | |||||||||||| |||||||    
T  17139574 caacatcaattgatcatgaatcttatcacaattcaacaacaac 17139616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 80 - 236
Target Start/End: Original strand, 54423986 - 54424142
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaacc 179  Q
    |||||| |||| |||||| ||||||||  |  |||||||||||||||| ||||||||||||||| |||||| |  |  | ||| | ||| ||||||| |     
T  54423986 aaaccaacaacaacaacttatttctcataacaaatcatgaatcatgcatacccaagccatgaataatcatccacaacgtcacttagcaataacaacatca 54424085  T
Q  180 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||||||||| ||||||||||||||||||||   |||||||||||||||||||    
T  54424086 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgag 54424142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 214
Target Start/End: Complemental strand, 14528286 - 14528151
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| ||| |||||||||||||||||| ||||||||||| || ||||||||||||||||| ||||||  | || ||| | ||||||||||| |    
T  14528286 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcattcatacccaagccatgaattaccatcaacaacatcacttagcaacaacaacatc 14528187  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaac 214  Q
     |||||||||||| | |||||||||||| |||||||    
T  14528186 aattgatcatgaatcttatcacaattcaacaacaac 14528151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 9303425 - 9303343
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactca-tttctcaacaacaatcatg 118  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||| |||| |||||||| |||||||||||||||||||    
T  9303425 acatcatcaaaatcaaacttcttctttatcaacccgttttacaaaaccaccaacaacaactcattttctcaacaacaatcatg 9303343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 227
Target Start/End: Complemental strand, 12560503 - 12560362
Alignment:
Q  87 caaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||| ||| |||||||||||||| |||||||||| |||||| |||| |  | || ||| | ||||||||||| ||||||||    
T  12560503 caacaacatctcatttctcaacatcaaatcatgaatcatgcatacccaagccaggaattaacatccacaacatcacttagcaacaacaacatccattgat 12560404  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattca 227  Q
    |||||| |||||||||||||| |||||||   ||||||||||    
T  12560403 catgaatcatatcacaattcaacaacaacatagcataattca 12560362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 28558198 - 28558282
Alignment:
Q  99 atttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa-caacaaccat 181  Q
    ||||||||||||||| | |||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  28558198 atttctcaacaacaaattatgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaacaacaatcaacaaccat 28558282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 236
Target Start/End: Complemental strand, 19261101 - 19260956
Alignment:
Q  92 acaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatga 190  Q
    |||||| |||||  |||||||| | |||||||||||| ||||||||||||||||| |||  |  | || | | ||||||||||||| | |||||||||||    
T  19261101 acaacttatttcataacaacaaattatgaatcatgcatacccaagccatgaattaacattcataacatcatttaacaacaacaacatctattgatcatga 19261002  T
Q  191 aacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||| ||||||||||||||||||||   | |||||||||||||||||    
T  19261001 aacttatcacaattcatcaacaacttagtataattcaccaattgag 19260956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 14301045 - 14301196
Alignment:
Q  87 caaccacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| ||||||||||||||||||  ||||||||||||||||| ||| ||||||| ||||||||  | || ||| |  |||||||||| | ||||||    
T  14301045 caacaacatctcatttctcaacaacaaaacatgaatcatgcaaaccaaagacatgaataatcatcaacaacatcacttagaaacaacaacatcaattgat 14301144  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattc-accaattgag 236  Q
    |||||| | |||||||||||| |||||||   ||||||||| ||||||||||    
T  14301145 catgaatcttatcacaattcaacaacaacatagcataattcaaccaattgag 14301196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 80 - 206
Target Start/End: Complemental strand, 55441123 - 55440996
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| ||| ||||||||||||||| || |||||||| ||||| ||||||| ||||||||||||||||  | || ||| | || |||||||| |    
T  55441123 aaaccaccaacaacatctcatttctcaacaaaaaatcatgaattatgcatacccaagtcatgaattatcatcaacaacatcacttagcatcaacaacatc 55441024  T
Q  179 cattgatcatgaaacatatcacaattca 206  Q
     |||||||||||||| ||||||||||||    
T  55441023 aattgatcatgaaacttatcacaattca 55440996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 92 - 236
Target Start/End: Complemental strand, 12349806 - 12349656
Alignment:
Q  92 acaactcatttctcaacaacaa-tcatgaatcatgcaaacc-----caagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||||| |||||||| || ||| | ||||||||||||||||     |||||||||| |||||||| |  | |||||  | ||||||||||| | ||||||    
T  12349806 acaacttatttctcatcatcaaattatgaatcatgcaaaccatggccaagccatgatttatcatctacaacatgacatatcaacaacaacatcaattgat 12349707  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||| |||||||||||| ||||||| | |||||||||||||||||||    
T  12349706 catgaaacttatcacaattcaacaacaacaaagcataattcaccaattgag 12349656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 214
Target Start/End: Complemental strand, 12489017 - 12488865
Alignment:
Q  64 atcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgac 161  Q
    ||||||||||||| || |||||| |||| |||||| ||||| || ||  || |||||||| ||| | ||||||||||||||||||||||||  | || ||    
T  12489017 atcaacccattttcaccaaaccaacaacaacaacttatttcccatcattaaatcatgaattatgaacacccaagccatgaattatcatcaacaacatcac 12488918  T
Q  162 taaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaac 214  Q
    | | ||||||||||| | |||||||||||| | |||||||||||| |||||||    
T  12488917 ttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaac 12488865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 227
Target Start/End: Complemental strand, 14059480 - 14059339
Alignment:
Q  87 caaccacaactcatttctcaacaaca-atcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||  | || ||  | |||||| |||| | |||||     
T  14059480 caacaacatctcatttctcatcaacagatcatgaattatgcaaacccaagccatgaattatcatcaacaacatcacatagcaacaataacatcaattgaa 14059381  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattca 227  Q
    ||||||   |||||||||||| |||||||   ||||||||||    
T  14059380 catgaatattatcacaattcaacaacaacatagcataattca 14059339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 213
Target Start/End: Original strand, 17204667 - 17204807
Alignment:
Q  74 tttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaac 172  Q
    ||||||||||||  ||| ||||||||||||||| |||||| |||||||| ||  | ||||||||||||||| |||| |||  |||| ||| | |||||||    
T  17204667 tttacaaaaccactaacaacaactcatttctcatcaacaaatcatgaattataaacacccaagccatgaatcatcaacaacaatattacttagcaacaac 17204766  T
Q  173 aacaaccattgatcatgaaacatatcacaattcatcaacaa 213  Q
    |||| ||||| | |||||  | |||||||||||| ||||||    
T  17204767 aacatccattaaacatgattcctatcacaattcaacaacaa 17204807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 228
Target Start/End: Original strand, 8631801 - 8631912
Alignment:
Q  117 tgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaacca 216  Q
    ||||||||||||||||||||||||||| ||||||||  | |||||  | ||||||||||| | |||  | ||||||| ||||||||| || ||||||| |    
T  8631801 tgaatcatgcaaacccaagccatgaatgatcatcaacaacatgacatatcaacaacaacatcaatttgttatgaaacttatcacaatccaacaacaacaa 8631900  T
Q  217 tgcataattcac 228  Q
     |||||||||||    
T  8631901 agcataattcac 8631912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 34439513 - 34439460
Alignment:
Q  183 gatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  34439513 gatcatgaaacttatcataattcatcaacaacaatgcataattcaccaattgag 34439460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 233
Target Start/End: Original strand, 17938582 - 17938701
Alignment:
Q  114 tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaa 213  Q
    |||||||||||| ||||||||||||||||| || |||||  | |||||  | ||||||||||| | |||||||||||||   | |||||| || ||||||    
T  17938582 tcatgaatcatgtaaacccaagccatgaatgattatcaacaacatgacatatcaacaacaacatcaattgatcatgaaaataaccacaatccaacaacaa 17938681  T
Q  214 ccatgcataattcaccaatt 233  Q
    | | |||||||||| |||||    
T  17938682 caaagcataattcatcaatt 17938701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 38811297 - 38811170
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 163  Q
    |||||||||||||||||  || |||| ||||||||||||| | || |||  ||||||| ||||| ||||||||||||||| ||||||||  | || |||     
T  38811297 tcaacccattttacaaagtcaccaacaacaactcatttctgatcatcaaaacatgaattatgcacacccaagccatgaatcatcatcaacaacatcactt 38811198  T
Q  164 aacaacaacaacaaccattgatcatgaa 191  Q
    | ||||||||||| | ||||| ||||||    
T  38811197 agcaacaacaacatcaattgaacatgaa 38811170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 176
Target Start/End: Original strand, 1990759 - 1990873
Alignment:
Q  64 atcaacccattttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgca-aacccaagccatgaattatcatcaaacatatgac 161  Q
    |||||||||||||||||||||| |||| ||||||||||||||| || | |||||||| | ||| | || ||||||||||||| |||| |||  ||||  |    
T  1990759 atcaacccattttacaaaaccaccaacaacaactcatttctcatcatcaaatcatgatttatgaacaaaccaagccatgaatcatcaacaacaatatctc 1990858  T
Q  162 taaacaacaacaaca 176  Q
    | |||||||||||||    
T  1990859 ttaacaacaacaaca 1990873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 146
Target Start/End: Complemental strand, 17960602 - 17960520
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattat 146  Q
    |||||||||||||||||  || |||| |||||||||||| || |||| |||||||||| ||||| ||||||| ||||||||||    
T  17960602 tcaacccattttacaaagtcaccaacaacaactcatttcccatcaacaaatcatgaattatgcacacccaagtcatgaattat 17960520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 9591035 - 9590918
Alignment:
Q  73 ttttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 171  Q
    ||||||||||||| |||| ||||||||||||||| || | |||||||||  ||| | ||||||| ||||||| |||| |||  |||| ||| ||||||||    
T  9591035 ttttacaaaaccaacaacaacaactcatttctcatcatcaaatcatgaactatgaacacccaagtcatgaatcatcaacaacaatatcacttaacaacaa 9590936  T
Q  172 caacaaccattgatcatg 189  Q
    ||||| | ||||| ||||    
T  9590935 caacatcaattgaacatg 9590918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 214
Target Start/End: Original strand, 12952915 - 12953072
Alignment:
Q  59 tcattatcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacat 156  Q
    |||| ||||||||||||| ||||||||| |||| ||||||||||||||| || | |||||||| | ||| | ||||||||||||||| |||| |||  ||    
T  12952915 tcataatcaacccatttttacaaaaccaacaacaacaactcatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaat 12953014  T
Q  157 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaac 214  Q
    ||  || | ||||||||||| | ||| | ||| || |  ||||||||||| |||||||    
T  12953015 atctcttagcaacaacaacatcaattaaacataaatctcatcacaattcaacaacaac 12953072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 214
Target Start/End: Original strand, 16880131 - 16880231
Alignment:
Q  114 tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaa 213  Q
    |||||||| ||||| |||||||||||||||||||||| |  | || ||| | |||||| |||| | ||||| |||||| | |||||||||||| ||||||    
T  16880131 tcatgaattatgcacacccaagccatgaattatcatccacaacatcacttagcaacaataacatcaattgaacatgaatcttatcacaattcaacaacaa 16880230  T
Q  214 c 214  Q
    |    
T  16880231 c 16880231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 214
Target Start/End: Original strand, 15876054 - 15876176
Alignment:
Q  93 caactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaa 191  Q
    |||||||||||||| | |||| |||||||| ||| | ||| ||||||||||| ||||| ||  | || ||| | ||||||||||| | ||||| ||||||    
T  15876054 caactcatttctcatccacaaatcatgaattatgaatacctaagccatgaatcatcattaacaacatcacttaccaacaacaacatcaattgaacatgaa 15876153  T
Q  192 acatatcacaattcatcaacaac 214  Q
     | |||||||||||| |||||||    
T  15876154 tcttatcacaattcaacaacaac 15876176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 214
Target Start/End: Complemental strand, 3576705 - 3576577
Alignment:
Q  87 caaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||||||||||||||| |||||| |||||||| ||| | ||||||||||||||| |||| | |  |||| ||| | ||||||||||| | ||  |     
T  3576705 caacaacaactcatttctcatcaacaaatcatgaattatgaacacccaagccatgaatcatcaaccacaatattacttagcaacaacaacatcaatcaaa 3576606  T
Q  186 catgaaacatatcacaattcatcaacaac 214  Q
    |||||  | |||||||||||| |||||||    
T  3576605 catgactcttatcacaattcaacaacaac 3576577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 176
Target Start/End: Original strand, 34559857 - 34559969
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 163  Q
    ||||||||||||||||||||| |||| |||||||| |||||| || | ||| |||| | ||| | || |||||||||||| |||| |||  |||| |||     
T  34559857 tcaacccattttacaaaaccaacaacaacaactcaattctcatcatcaaattatgatttatgaacactcaagccatgaatcatcaacaacaatatcactt 34559956  T
Q  164 aacaacaacaaca 176  Q
    | |||||||||||    
T  34559957 agcaacaacaaca 34559969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 236
Target Start/End: Original strand, 28558271 - 28558301
Alignment:
Q  206 atcaacaaccatgcataattcaccaattgag 236  Q
    |||||||||||||||||||||||||||||||    
T  28558271 atcaacaaccatgcataattcaccaattgag 28558301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 11061247 - 11061122
Alignment:
Q  112 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaac 211  Q
    |||||||||| ||| | ||||||||||||||| |||| |||  |||| ||| | || |||||||| | ||||| |||||    |||||||||||| ||||    
T  11061247 aatcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaccaacaacatcaattgaacatgactattatcacaattcaacaac 11061148  T
Q  212 aaccatgcataattc-accaattgag 236  Q
    |||   ||||||||| ||||||||||    
T  11061147 aacatagcataattcaaccaattgag 11061122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 76
Target Start/End: Original strand, 8901257 - 8901293
Alignment:
Q  40 tcatcaaaatcaaacttcttcattatcaacccatttt 76  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  8901257 tcatcaaaatcaaacttctccattttcaacccatttt 8901293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 2e-76; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 38 - 236
Target Start/End: Original strand, 11583982 - 11584184
Alignment:
Q  38 catcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaa-cccaagc 136  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  11583982 catcatcaaaaacaaacttcttcatcatcaacccattttacaaaaccacgaacaacaactcatttctcaacaacaatcatgaatcatgcaaaacccaagc 11584081  T
Q  137 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccat---gcataattcaccaatt 233  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    ||||||||||||||||    
T  11584082 catgaattatcatcaaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcaacaacaacaacaaagcataattcaccaatt 11584181  T
Q  234 gag 236  Q
    |||    
T  11584182 gag 11584184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 80 - 242
Target Start/End: Original strand, 2031783 - 2031946
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| ||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  2031783 aaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaatatgactaaacaacaacaacaac 2031882  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2031883 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 2031946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 98 - 242
Target Start/End: Original strand, 11342675 - 11342821
Alignment:
Q  98 catttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaa-caacaacaaccattgatcatgaaacat 195  Q
    |||||||||||||||| ||||||||||||||||||||||||||  || ||||||||  |||||||||||||| |||||||||||||||||||||||||||    
T  11342675 catttctcaacaacaaatcatgaatcatgcaaacccaagccatatatcatcatcaacaatatgactaaacaaacaacaacaaccattgatcatgaaacat 11342774  T
Q  196 atcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  11342775 atcacaattcatcaacaaccatgcataattcaccaattgagcataat 11342821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 59 - 236
Target Start/End: Complemental strand, 1168500 - 1168321
Alignment:
Q  59 tcattatcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 156  Q
    |||| ||||||||||||| |  ||| || |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |     
T  1168500 tcataatcaacccattttcatcaaaacaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaac 1168401  T
Q  157 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||| | ||||||||||| | |||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  1168400 atgacttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacattgcataattcaccaattgag 1168321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 28261501 - 28261651
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||| | | |||| |||||||||||||||||||||||||||||   | |||||||||||||||||||||| ||||||    
T  28261501 caacaacatctcatttctcaacaacaaaccaagaattatgcaaacccaagccatgaattatcatcagcaacatgactaaacaacaacaacaacaattgat 28261600  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||| ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  28261601 cataaaacatatcacaatttatcaacaacaatgcataattcaccaattgag 28261651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 96 - 236
Target Start/End: Original strand, 21397078 - 21397222
Alignment:
Q  96 ctcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa---caacaaccattgatcatgaa 191  Q
    |||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||  | |||||| ||||||||   ||||||| ||||||||||||    
T  21397078 ctcatttctcaataacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaataacaacaacaattgatcatgaa 21397177  T
Q  192 acatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    || |||||||||||||||||||| |||||||||||||||||||||    
T  21397178 acttatcacaattcatcaacaacaatgcataattcaccaattgag 21397222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 80 - 242
Target Start/End: Original strand, 21204898 - 21205062
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa 177  Q
    |||||| |||| |||||| ||||| |||||||||  | |||||||||||| |||||||||||||||||  || ||  | || ||| ||||||||||||||    
T  21204898 aaaccaacaacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagaataaataacatcacttaacaacaacaacaa 21204997  T
Q  178 ccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21204998 atattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 21205062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 68 - 236
Target Start/End: Original strand, 20712036 - 20712206
Alignment:
Q  68 acccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 165  Q
    ||||||||| || |||||| |||| |||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| ||||||  | |||||| ||    
T  20712036 acccattttcaccaaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattaacatcaacaacatgacttaa 20712135  T
Q  166 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||||||| | |||||||||| ||| |||||||||||||||||||| | |||||||||||||||||||    
T  20712136 caacaacaacatcaattgatcatgcaacttatcacaattcatcaacaacaaagcataattcaccaattgag 20712206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 235
Target Start/End: Complemental strand, 21647006 - 21646857
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacat-atgactaaacaacaacaacaaccattga 184  Q
    |||| ||| |||||||||||||||||| | |  ||| || ||||||||||||||||||||||||||| ||| ||||||||||||||||| |||| |||||    
T  21647006 caacaacatctcatttctcaacaacaaaccaataattatacaaacccaagccatgaattatcatcaa-catcatgactaaacaacaacagcaacaattga 21646908  T
Q  185 tcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattga 235  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||    
T  21646907 tcatgaaacatatcacaattcatcaacaacgatacataattcaccaattga 21646857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 11337452 - 11337303
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 186  Q
    |||| ||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||  | |||||| | ||||||||||| | |||||||    
T  11337452 caacaacatctcatttctcaacaacaatcatgaatcatgtaaactcaagccatgaattatcatcaacgacatgacttagcaacaacaacatcaattgatc 11337353  T
Q  187 atgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||| ||||||||||||||||||||    ||||||||||||| ||||    
T  11337352 atgaaacttatcacaattcatcaacaacataacataattcaccaaatgag 11337303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 24475563 - 24475708
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||| | | |||| ||||||||||||||||||||||||||||||  | ||||||||||||||||||||   ||||||    
T  24475563 caacaacatctcatttctcaacaacaaaccaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaaca---attgat 24475659  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||||||  |||||||||||||||| |||||||||||||||||||||    
T  24475660 catgaaacata--acaattcatcaacaacaatgcataattcaccaattgag 24475708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 4865242 - 4865393
Alignment:
Q  87 caaccacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaa-ttatcatcaaacatatgactaaacaacaacaacaaccattga 184  Q
    |||| ||| ||||| ||||||||||||| || |||| |||||||||||||||||||| ||||||||||  | |||| |||||||| | |||||| |||||    
T  4865242 caacaacacctcatctctcaacaacaattcaagaattatgcaaacccaagccatgaaattatcatcaacaacatgaataaacaaccataacaacaattga 4865341  T
Q  185 tcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  4865342 tcatgaaacatatcacaattcatcaaccacaatgcataattcaccaattgag 4865393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 80 - 242
Target Start/End: Original strand, 21650668 - 21650831
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| |||||| ||||| | ||||||| | |||||||||||| |||||| |||||||||| |||  |  | || ||| ||||||||||||| |    
T  21650668 aaaccaacaacaacaacttatttcaccacaacaaattatgaatcatgcatacccaaaccatgaattagcattcataacatcacttaacaacaacaacatc 21650767  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
     |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||    
T  21650768 tattgatcatgaaacttatcacaattcaacaacaaccatgcataattcaccaattgagcataat 21650831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 21906729 - 21906846
Alignment:
Q  115 catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaac 214  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||| |||||||||| ||   |||||||||||||| ||||||||||||||||||||    
T  21906729 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaacatca---attgatcatgaaacttatcacaattcatcaacaac 21906825  T
Q  215 catgcataattcaccaattga 235  Q
       |||||||||| |||||||    
T  21906826 atagcataattcatcaattga 21906846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 16105573 - 16105656
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactca-tttctcaacaacaatcatga 119  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  16105573 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatga 16105656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 109158 - 109075
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactca-tttctcaacaacaatcatga 119  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  109158 acatcatcaaaatcaaacttcttctctatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatga 109075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 24183370 - 24183249
Alignment:
Q  112 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaac 211  Q
    |||||||||||||||||||||||||||| ||||||||||||    |||||  | |||||||| || | ||||||||||||||  ||||||||||| ||||    
T  24183370 aatcatgaatcatgcaaacccaagccattaattatcatcaac---atgacatatcaacaacaccatcaattgatcatgaaactcatcacaattcaacaac 24183274  T
Q  212 aaccatgcataattcaccaattgag 236  Q
    ||| | |||||||||||||||||||    
T  24183273 aacaaagcataattcaccaattgag 24183249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 73 - 227
Target Start/End: Original strand, 19405503 - 19405658
Alignment:
Q  73 ttttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 171  Q
    |||||| ||| || |||| ||| |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||  | || ||  | ||  ||    
T  19405503 ttttaccaaaacaccaacaacatctcatttctccacaacaaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacataccagtaa 19405602  T
Q  172 caacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattca 227  Q
    ||| | | |||||||||||||| |||||||||||| ||||||| |  |||||||||    
T  19405603 caatatcaattgatcatgaaacttatcacaattcaacaacaacgaatcataattca 19405658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 97 - 206
Target Start/End: Original strand, 23466447 - 23466557
Alignment:
Q  97 tcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat-atgactaaacaacaacaacaaccattgatcatgaaaca 194  Q
    ||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||| ||||| || ||| | ||||||||||| | ||||||||||||||     
T  23466447 tcattcctcaacaacaaatcatgaatcatgcatacccaagccatgaactatcatc-aacatcatcacttagcaacaacaacatcaattgatcatgaaact 23466545  T
Q  195 tatcacaattca 206  Q
    ||||||||||||    
T  23466546 tatcacaattca 23466557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 233
Target Start/End: Original strand, 7728378 - 7728547
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 163  Q
    |||||||||||| ||||  || |||| ||| ||||| ||||| ||||||| ||||||| ||||| |||||||| || ||||||||||||  | || |||     
T  7728378 tcaacccatttttcaaagtcaccaacaacacctcatctctcaccaacaattcatgaattatgcacacccaagcgataaattatcatcaacaacatcactt 7728477  T
Q  164 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    | ||||||||||| | ||||| |||||| | |||||||||||| |||||||   |||||||||| |||||    
T  7728478 agcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataattcaacaatt 7728547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 233
Target Start/End: Original strand, 3673818 - 3673989
Alignment:
Q  64 atcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgac 161  Q
    ||||||||||||| || |||||| |||| |||||| |||||||| || ||| || ||| | ||| | ||||||||||||||| |||||||| ||  |  |    
T  3673818 atcaacccattttcaccaaaccaacaacaacaacttatttctcatcatcaaatcgtgatttatgaacacccaagccatgaatcatcatcaaccacctcgc 3673917  T
Q  162 taaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    | | ||||||||||| | |||||||||||||| |||||||||||| |||||||   |||||||||| |||||    
T  3673918 ttagcaacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacatagcataattcaacaatt 3673989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 227
Target Start/End: Original strand, 23493875 - 23494040
Alignment:
Q  64 atcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgac 161  Q
    |||||| |||||| || |||||| |||| |||||| |||||||| || ||| |||||||| ||| | ||||||||||||||| ||||||||  | || ||    
T  23493875 atcaactcattttcaccaaaccaacaacaacaacttatttctcatcatcaaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcac 23493974  T
Q  162 taaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattca 227  Q
    | | ||||||||||| | ||||| |||||| | |||||||||||| |||||||   ||||||||||    
T  23493975 ttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataattca 23494040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 214
Target Start/End: Original strand, 21616974 - 21617124
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 163  Q
    ||||||||||||||||||||| | || ||| |||| |||||| || ||| |||||||| ||| | ||||||||||||||| | || |||  |||| |||     
T  21616974 tcaacccattttacaaaaccaaccacaacagctcacttctcatcatcaaatcatgaattatgaacacccaagccatgaatcaacaacaacaatatcactt 21617073  T
Q  164 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaac 214  Q
    | ||||||||||| | ||||| |||||| |  ||||||||||| |||||||    
T  21617074 agcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaac 21617124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 24225634 - 24225596
Alignment:
Q  38 catcatcaaaatcaaacttcttcattatcaacccatttt 76  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24225634 catcatcaaaatcaaacttcttcattatcaacccatttt 24225596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 233
Target Start/End: Original strand, 19862183 - 19862336
Alignment:
Q  81 aaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaacc 179  Q
    ||||| |||| ||||||||||||||| || ||| |||||||| ||| | ||||||| ||||||| |||| |||  |||| ||| | ||||||||||| |     
T  19862183 aaccaccaacaacaactcatttctcatcatcaaatcatgaattatgaacacccaagtcatgaatcatcaacaataatatcacttagcaacaacaacatca 19862282  T
Q  180 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    ||||  |||||  | |||||||||||| |||||||   |||||||||| |||||    
T  19862283 attgcacatgattcttatcacaattcaacaacaacatagcataattcaacaatt 19862336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 148
Target Start/End: Original strand, 16595474 - 16595550
Alignment:
Q  73 ttttacaaaaccagcaaccacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatca 148  Q
    |||||| |||| | |||| ||| ||||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||    
T  16595474 ttttaccaaactaccaacaacatctcatttctcatcaacaattcatgaatcatgcacacccaagtcatgaattatca 16595550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 148
Target Start/End: Complemental strand, 32966436 - 32966352
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaa-caatcatgaatcatgcaaacccaagccatgaattatca 148  Q
    |||||||||||||||||  || |||| ||||||||||||||| ||| |||| |||||| |||||  | |||||||||||||||||    
T  32966436 tcaacccattttacaaagtcaccaacaacaactcatttctcatcaaccaattatgaattatgcacgctcaagccatgaattatca 32966352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 214
Target Start/End: Original strand, 6456580 - 6456732
Alignment:
Q  64 atcaacccattt-tacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgac 161  Q
    |||||||| ||| ||||||| || |||| |||||| |||||||| || ||| |||||| ||||| | ||||||||||||||| |||| |||  ||||  |    
T  6456580 atcaacccgtttgtacaaaaacaacaacaacaacttatttctcatcatcaaatcatgattcatgaacacccaagccatgaatcatcaacaacgatatctc 6456679  T
Q  162 taaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaac 214  Q
    | ||||||||||||| | ||| | |||||  |  ||||||||||| |||||||    
T  6456680 ttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaacaac 6456732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1867 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 37 - 236
Target Start/End: Original strand, 75 - 274
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 136  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  75 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaacaacaacaactcatttctcagcaacaatcatgaatcatgcaaacccaagc 174  T
Q  137 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||||||||||||  | |||||  | ||||||||||| | |||||||||||||| |||||||||||| ||||||| | |||||||||||||||||||    
T  175 catgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgag 274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833 (Bit Score: 134; Significance: 8e-70; HSPs: 1)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 37 - 214
Target Start/End: Original strand, 3230 - 3407
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 136  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3230 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 3329  T
Q  137 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaac 214  Q
    ||||||||||||||||  | |||||  | ||||||||||| | |||||||||||||| ||||||||||||||||||||    
T  3330 catgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaac 3407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 3e-69; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 37 - 242
Target Start/End: Original strand, 18583264 - 18583453
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 136  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18583264 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 18583363  T
Q  137 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||||||||                ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18583364 catgaattatcat----------------caacaacaacatcaattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 18583447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 72 - 242
Target Start/End: Complemental strand, 35015447 - 35015276
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||| ||||||||| |||| ||||  |||||||||||||||| ||||||||||||||||||||||||||| || ||||||||  ||||||||||||||||    
T  35015447 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatgtatcatcatcaacaatatgactaaacaaca 35015348  T
Q  171 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35015347 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 35015276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 72 - 236
Target Start/End: Complemental strand, 19983581 - 19983416
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||| ||||||||| |||| ||||  |||||||||||||||| | ||||||||||||||||||||||||| || ||||||||  ||||||||||||||||    
T  19983581 atttcacaaaaccaccaacaacaatccatttctcaacaacaaaccatgaatcatgcaaacccaagccatgtatcatcatcaacaatatgactaaacaaca 19983482  T
Q  171 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||||| | | |||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  19983481 acaacaaccactaaccatgaaacatatcacaattcatcaacaatcatgcataattcactaattgag 19983416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 87 - 235
Target Start/End: Complemental strand, 25744480 - 25744331
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||| ||||||| | | |||| ||||||||||||||||||||||||||||||  | ||||||||||||||||||||||  |||||    
T  25744480 caacaacatctcatttctctacaacaaaccaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacatttgat 25744381  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattga 235  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  25744380 catgaaacatatcacaattcatcaacaacaatgcataattcaccacttga 25744331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 81 - 242
Target Start/End: Original strand, 26089710 - 26089871
Alignment:
Q  81 aaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaacca 180  Q
    ||||| |||| |||||| ||||| |||||||||| |||||||||||| |||||| |||||||||| |||| |  | || ||| ||||||||||||| | |    
T  26089710 aaccaacaacaacaacttatttcacaacaacaattatgaatcatgcatacccaaaccatgaattagcatccataacatcacttaacaacaacaacatcta 26089809  T
Q  181 ttgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  26089810 ttgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataat 26089871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 96 - 236
Target Start/End: Original strand, 32898779 - 32898920
Alignment:
Q  96 ctcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 194  Q
    |||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||  | |||||||||||||||||||  | ||||||||||||||     
T  32898779 ctcatttctcaacaacaaaccatgaatcatgcaaacccaagccattaattatcatcaacaacatgactaaacaacaacaacttcaattgatcatgaaact 32898878  T
Q  195 tatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  32898879 tatcacaattcatcaacaataatgcataattcaccaattgag 32898920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 37 - 176
Target Start/End: Complemental strand, 18823712 - 18823573
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 136  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||| || | |||||||||||||| ||||||||||||||||||||||||||||||    
T  18823712 acatcatcaaaatcaaacttcttctttatcaagccattttacaaaaccaccaccaacaactcatttctccacaacaatcatgaatcatgcaaacccaagc 18823613  T
Q  137 catgaattatcatcaaacatatgactaaacaacaacaaca 176  Q
    |||| |||||||||||  | |||||  | |||||||||||    
T  18823612 catggattatcatcaacaacatgacatatcaacaacaaca 18823573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 80 - 242
Target Start/End: Complemental strand, 18002777 - 18002615
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaacc 179  Q
    |||||| |||| |||||| ||||| |||||||||  |||||||||||| ||||||||||||||||| |||| |  |  | ||| ||||||||||||| |     
T  18002777 aaaccaacaacaacaacttatttcacaacaacaagtatgaatcatgcatacccaagccatgaattagcatccataacgtcacttaacaacaacaacatct 18002678  T
Q  180 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  18002677 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcatcaattgagcataat 18002615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 80 - 242
Target Start/End: Complemental strand, 15742505 - 15742339
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa- 177  Q
    ||||||||||| |||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| |||  |  | || ||| ||||||||||||||     
T  15742505 aaaccagcaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacaac 15742406  T
Q  178 --ccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
      | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15742405 atctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 15742339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 37 - 176
Target Start/End: Complemental strand, 18839567 - 18839428
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 136  Q
    |||||||||||||||||||||||| || ||||| ||||||||||||||| || | |||||||||||||| ||||||||||||||||||||||||||||||    
T  18839567 acatcatcaaaatcaaacttcttctttttcaactcattttacaaaaccaccaccaacaactcatttctccacaacaatcatgaatcatgcaaacccaagc 18839468  T
Q  137 catgaattatcatcaaacatatgactaaacaacaacaaca 176  Q
    |||| |||||||||||  | |||||  | |||||||||||    
T  18839467 catggattatcatcaacaacatgacatatcaacaacaaca 18839428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 23994902 - 23995059
Alignment:
Q  87 caaccacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattga 184  Q
    |||| |||||| ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||  |  | || ||| ||||||||||||| | |||||    
T  23994902 caacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacatctattga 23995001  T
Q  185 tcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23995002 tcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 23995059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 112 - 236
Target Start/End: Original strand, 22440941 - 22441064
Alignment:
Q  112 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaac 211  Q
    ||||||||||||||||| |||||||||||||||||||||||  | |||||| ||||||||||||||| |||||||||||||| |||||||| |||| |||    
T  22440941 aatcatgaatcatgcaa-cccaagccatgaattatcatcaacaacatgacttaacaacaacaacaacaattgatcatgaaacttatcacaaatcatgaac 22441039  T
Q  212 aaccatgcataattcaccaattgag 236  Q
    ||| |||||||||||||||||||||    
T  22441040 aacaatgcataattcaccaattgag 22441064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 87 - 233
Target Start/End: Original strand, 31628248 - 31628395
Alignment:
Q  87 caaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||  | |||||  | ||||||||||| | ||||||    
T  31628248 caacaacatctcatttctccacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattgat 31628347  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    |||||||| |||||||||||| ||||||| | ||||||||||||||||    
T  31628348 catgaaacttatcacaattcaacaacaacaaagcataattcaccaatt 31628395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 18777119 - 18777275
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| |||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| |||| |  | || ||| |||||||||||||      
T  18777119 aaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatt 18777218  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattga 235  Q
    ||||||||||||||| ||||||||||||||||||||   ||||||||||||||||||    
T  18777219 cattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattga 18777275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 13014949 - 13014826
Alignment:
Q  112 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaac 211  Q
    ||||| ||||||||||| ||||||||| |||||||||||||  | |||||| |||| || ||||||| ||||||| |||||| |||||||||||||||||    
T  13014949 aatcaagaatcatgcaa-cccaagccacgaattatcatcaacaacatgacttaacatcagcaacaacaattgatcttgaaacttatcacaattcatcaac 13014851  T
Q  212 aaccatgcataattcaccaattgag 236  Q
    ||| |||||||||||||||||||||    
T  13014850 aacaatgcataattcaccaattgag 13014826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 4991002 - 4991085
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactca-tttctcaacaacaatcatga 119  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  4991002 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatga 4991085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 233
Target Start/End: Original strand, 18398890 - 18399065
Alignment:
Q  59 tcattatcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacata 157  Q
    |||| ||||||||||||| ||||||||| |||| ||||||||||||| | ||  | |||||||| ||||| ||||||||||||||||||||||||  | |    
T  18398890 tcataatcaacccatttttacaaaaccaacaacaacaactcatttcttatcacaattcatgaattatgcacacccaagccatgaattatcatcaacaaca 18398989  T
Q  158 tgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    | ||| | ||||||||||| | ||||| |||||| |  ||||||||||| |||||||   |||||||||| |||||    
T  18398990 tcacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacatagcataattcaacaatt 18399065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 119 - 233
Target Start/End: Original strand, 18432656 - 18432770
Alignment:
Q  119 aatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatg 218  Q
    ||||||||||||||||||||||||||||||||||  | || ||  | |||||||| || | |||||||||||||| |||||||||||| ||||||| | |    
T  18432656 aatcatgcaaacccaagccatgaattatcatcaacaacataacatatcaacaacatcatcaattgatcatgaaacttatcacaattcaacaacaacaaag 18432755  T
Q  219 cataattcaccaatt 233  Q
    |||||||||||||||    
T  18432756 cataattcaccaatt 18432770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 233
Target Start/End: Original strand, 16086007 - 16086144
Alignment:
Q  96 ctcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacat 195  Q
    |||||||||| |||  |||||||||||||||||||||||| ||||||||||||| ||  | |||||  | ||||||||||| | | |||||||||||| |    
T  16086007 ctcatttctccacataaatcatgaatcatgcaaacccaagtcatgaattatcattaacaacatgacatatcaacaacaacatcaaatgatcatgaaactt 16086106  T
Q  196 atcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    |||| |||||| ||||||| | | ||||||||||||||    
T  16086107 atcataattcaacaacaacaaggtataattcaccaatt 16086144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 233
Target Start/End: Complemental strand, 18381965 - 18381803
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||| ||||||||| |||| ||||||||||||||| |||||| |||||||| ||| | ||||||||||||||| |||| |||  | || ||| | |||||    
T  18381965 atttcacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaaca 18381866  T
Q  171 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    |||||| | ||||| |||||  | |||||||||||| ||||||| | |||||||||| |||||    
T  18381865 acaacatcaattgaacatgactcttatcacaattcaacaacaacaaagcataattcaacaatt 18381803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 18570271 - 18570409
Alignment:
Q  99 atttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatat 197  Q
    ||||| ||||||||| | |||||||||||| ||||| ||||||||||| |||| |  | || ||| ||||||||| ||  | |||||||||||||| |||    
T  18570271 atttcacaacaacaaattatgaatcatgcatacccaggccatgaattagcatccataacatcacttaacaacaactacttctattgatcatgaaacttat 18570370  T
Q  198 cacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||||||||||||   |||||||||||||||||||    
T  18570371 cacaattcatcaacaacatagcataattcaccaattgag 18570409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 148
Target Start/End: Complemental strand, 17083496 - 17083383
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaa 134  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| || |||| ||||||||||||| | || | |||||||| | ||| | ||||||    
T  17083496 acatcatcaaaatcaaacttcttcattatcaacccattttcacaaaaacaacaacaacaactcatttctaatcatcaaatcatgatttatgaacacccaa 17083397  T
Q  135 gccatgaattatca 148  Q
    ||||||||| ||||    
T  17083396 gccatgaatcatca 17083383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 233
Target Start/End: Complemental strand, 22362054 - 22361885
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 163  Q
    ||||||||||||||||||| | |||| |||||||| |||||| || |||| ||||||| ||| | ||||||||||||||| |||| |||  |||| |||     
T  22362054 tcaacccattttacaaaactaacaacaacaactcaattctcatcatcaattcatgaattatgaacacccaagccatgaatcatcaacaacaatatcactt 22361955  T
Q  164 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    | ||||||||||| | ||||| ||||||    ||||||||||| |||||||   |||||||||| |||||    
T  22361954 agcaacaacaacatcaattgaacatgaatttcatcacaattcaacaacaacatagcataattcatcaatt 22361885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 214
Target Start/End: Complemental strand, 25367495 - 25367376
Alignment:
Q  96 ctcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 194  Q
    ||||||||||| ||||||| ||||||||||||| |||||||||||||||||||   ||  | || ||| | ||||||||||| | ||||| |||||| |     
T  25367495 ctcatttctcatcaacaattcatgaatcatgcacacccaagccatgaattatcgataacaacatcacttagcaacaacaacatcaattgaacatgaatct 25367396  T
Q  195 tatcacaattcatcaacaac 214  Q
    |||||||||||| |||||||    
T  25367395 tatcacaattcaacaacaac 25367376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 233
Target Start/End: Original strand, 16106502 - 16106643
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 186  Q
    |||| ||| |||||||||| |||  ||||||||||||||||||     | ||||||||||||| ||  | |||||  | ||||||||||| | | |||||    
T  16106502 caacaacatctcatttctccacataaatcatgaatcatgcaaa-----gtcatgaattatcattaacaacatgacatatcaacaacaacatcaaatgatc 16106596  T
Q  187 atgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    ||||||| |||||||||||| ||||||| | | ||||||||||||||    
T  16106597 atgaaacttatcacaattcaacaacaacaaggtataattcaccaatt 16106643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 212
Target Start/End: Complemental strand, 28195360 - 28195234
Alignment:
Q  87 caaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| ||||||||||||||| || |||| ||| |||||||| |||||||||||||||||||||  | || ||| | ||||||| ||||| ||||||    
T  28195360 caacaacatctcatttctcaacaataaatcat-aattatgcaaactcaagccatgaattatcatcaacaacatcacttagcaacaaccacaacaattgat 28195262  T
Q  186 catgaaa-catatcacaattcatcaaca 212  Q
    ||| ||| |  ||||||||||| |||||    
T  28195261 cataaaatctcatcacaattcaacaaca 28195234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 178
Target Start/End: Complemental strand, 18629892 - 18629786
Alignment:
Q  73 ttttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 171  Q
    ||||||||||||| |||| |||||| |||||||| || ||| |||||| | ||| | |||||| |||||||| |||| |||  |||| ||| ||||||||    
T  18629892 ttttacaaaaccaacaacaacaacttatttctcatcatcaaatcatgatttatgaacacccaaaccatgaatcatcaacaacaatatcacttaacaacaa 18629793  T
Q  172 caacaac 178  Q
    |||||||    
T  18629792 caacaac 18629786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 15740209 - 15740269
Alignment:
Q  87 caaccacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattat 146  Q
    |||| ||| ||||||||||| ||||||| ||||||||||||| |||||| |||||||||||    
T  15740209 caacaacatctcatttctcatcaacaattcatgaatcatgcacacccaaaccatgaattat 15740269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 25651197 - 25651345
Alignment:
Q  68 acccatttt-acaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 165  Q
    ||||||||| ||||||||| |||| |||||| | |||||| || | |||||||| | ||| | ||||||||||||||| |||| |||  |||| ||| |     
T  25651197 acccattttcacaaaaccaacaacaacaacttaattctcatcatccaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcacttag 25651296  T
Q  166 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaac 214  Q
    ||||||||||| | ||||| |||||| |  |||| |||||| |||||||    
T  25651297 caacaacaacatcaattgaacatgaatctcatcataattcaacaacaac 25651345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 148
Target Start/End: Original strand, 25919571 - 25919655
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatca 148  Q
    ||||| |||||||||||  || |||| | ||||||||| ||| |||||| |||||||| ||| | ||||||||||||||| ||||    
T  25919571 tcaactcattttacaaagtcaccaacaataactcatttttcatcaacaaatcatgaattatgaatacccaagccatgaatcatca 25919655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 129; Significance: 8e-67; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 37 - 236
Target Start/End: Original strand, 21442 - 21642
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaat-catgaatcatgcaaacccaag 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||| |||||||||||||||||||||    
T  21442 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttcttaacaacaattcatgaatcatgcaaacccaag 21541  T
Q  136 ccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattga 235  Q
    |||||||||||||||||  | |||||| | ||||||||||| | | | |||||||||| ||||||||||||||||||||   ||||||||||||||||||    
T  21542 ccatgaattatcatcaacaacatgacttagcaacaacaacatcaaataatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattga 21641  T
Q  236 g 236  Q
    |    
T  21642 g 21642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 37 - 236
Target Start/End: Original strand, 31141 - 31341
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaag 135  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  31141 acatcatcaaaatcaaactttttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaattcatgaatcatgcaaacccaag 31240  T
Q  136 ccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattga 235  Q
    |||||||||||||||||  | |||||| | |||||| |||| | |||||| ||||||| ||||||||||||||||||||   | |||||| |||||||||    
T  31241 ccatgaattatcatcaacaacatgacttagcaacaaaaacatcaattgataatgaaacttatcacaattcatcaacaacatagtataatttaccaattga 31340  T
Q  236 g 236  Q
    |    
T  31341 g 31341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 37 - 236
Target Start/End: Original strand, 24890 - 25088
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 136  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  24890 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgc-aacccaagc 24988  T
Q  137 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||||||||||||  | ||| |  | ||||||||||||| ||||||| |||||| |||||||||||| ||||||| |  ||||||||||||||||||    
T  24989 catgaattatcatcaacaacatgccatatcaacaacaacaacaattgatcgtgaaacttatcacaattcaacaacaacaaaacataattcaccaattgag 25088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 106 - 236
Target Start/End: Original strand, 25212 - 25341
Alignment:
Q  106 aacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattc 205  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||  | ||| |  | ||||||||||||| ||||||| |||||| |||||||||||    
T  25212 aacaacaatcatgaatcatgcaa-cccaagccatgaattatcatcaacaacatgccatatcaacaacaacaacaattgatcgtgaaacttatcacaattc 25310  T
Q  206 atcaacaaccatgcataattcaccaattgag 236  Q
    | ||||||| |  ||||||||||||||||||    
T  25311 aacaacaacaaaacataattcaccaattgag 25341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 128; Significance: 3e-66; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 80 - 242
Target Start/End: Complemental strand, 41507091 - 41506928
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| ||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  41507091 aaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaatatgactaaacaacaacaacaac 41506992  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41506991 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 41506928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 72 - 242
Target Start/End: Complemental strand, 24717152 - 24716981
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||||||||||||| |||| ||||  ||||| |||||||||| | ||||||||||||||||||||||||| || ||||||||  ||||||||||||| ||    
T  24717152 attttacaaaaccaccaacaacaatccatttatcaacaacaaattatgaatcatgcaaacccaagccatgtatcatcatcaacaatatgactaaacatca 24717053  T
Q  171 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  24717052 acaacaaccattgaacatgaaacaaatcacaattcatcaacaaccatgcataattcaccaattgagcataat 24716981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 99 - 242
Target Start/End: Original strand, 39115267 - 39115411
Alignment:
Q  99 atttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatat 197  Q
    |||||||||||| || | |||||||||||| || |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39115267 atttctcaacaataaattatgaatcatgcatacacaagtcatgaattatcatcaaccatatgactaaacaacaacaacaaccattgatcatgaaacatat 39115366  T
Q  198 cacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    ||| ||||||||||||| ||||||||||||||||||||| |||||    
T  39115367 cacgattcatcaacaactatgcataattcaccaattgagcataat 39115411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 97 - 233
Target Start/End: Original strand, 41246648 - 41246785
Alignment:
Q  97 tcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacat 195  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||| | |||||||||||||| |    
T  41246648 tcatttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaacaacatcaattgatcatgaaactt 41246747  T
Q  196 atcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  41246748 atcacaattcatcaacaacaatgcataattcaccaatt 41246785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 19993321 - 19993171
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||||| | |||| |||||||||| |||||||||||||||||||  | |||||||||||||||||||||| ||||||    
T  19993321 caacaacatctcatttctcaacaacaatccaagaattatgcaaaccctagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgat 19993222  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
     ||||||  |||||||||||||||||||| |||||||||||||||||||||    
T  19993221 gatgaaatttatcacaattcatcaacaacaatgcataattcaccaattgag 19993171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 118 - 236
Target Start/End: Complemental strand, 22235038 - 22234920
Alignment:
Q  118 gaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccat 217  Q
    |||| |||||||||||| |||||||||||||||||  | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  22235038 gaattatgcaaacccaatccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaat 22234939  T
Q  218 gcataattcaccaattgag 236  Q
    |||||||||||||||||||    
T  22234938 gcataattcaccaattgag 22234920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 20573458 - 20573309
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 186  Q
    |||| ||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  | |||||  | ||||||||||| | |||||||    
T  20573458 caacaacatctcatttctcaacacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatc 20573359  T
Q  187 atgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||| |||||||||||| ||||||| | | |||||||||||||||||    
T  20573358 atgaaacttatcacaattcaacaacaacaaaggataattcaccaattgag 20573309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 112 - 236
Target Start/End: Original strand, 37611675 - 37611798
Alignment:
Q  112 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaac 211  Q
    |||||||||| |||||| ||||||||||||||||||||||| || |||||| ||||||||||||||| |||||||||||||| | |||||||||||||||    
T  37611675 aatcatgaattatgcaa-cccaagccatgaattatcatcaaccacatgacttaacaacaacaacaacaattgatcatgaaacttttcacaattcatcaac 37611773  T
Q  212 aaccatgcataattcaccaattgag 236  Q
    ||| | |||||||||||||||||||    
T  37611774 aacaaagcataattcaccaattgag 37611798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 68 - 236
Target Start/End: Original strand, 20481565 - 20481735
Alignment:
Q  68 acccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 165  Q
    ||||||||| || |||||| |||| |||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| ||||||  | |||||| ||    
T  20481565 acccattttcaccaaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattaacatcaacaacatgacttaa 20481664  T
Q  166 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||||||| | |||||||||| ||| |||||||||||||||||||| | | |||||||||||||||||    
T  20481665 caacaacaacatcaattgatcatgcaacttatcacaattcatcaacaacaaagtataattcaccaattgag 20481735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 274416 - 274572
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| |||||| ||||| ||||||||| | |||| ||||||| ||||||||||||||||| |||| |  | || ||| ||||| ||||||| |    
T  274416 aaaccaacaacaacaacttatttcacaacaacaaattatgattcatgcatacccaagccatgaattagcatccataacatcacttaacaataacaacatc 274515  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattga 235  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  274516 tattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattga 274572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 641433 - 641277
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| |||||| ||||| ||||||||| | |||| ||||||| ||||||||||||||||| |||| |  | || ||| ||||| ||||||| |    
T  641433 aaaccaacaacaacaacttatttcacaacaacaaattatgattcatgcatacccaagccatgaattagcatccataacatcacttaacaataacaacatc 641334  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattga 235  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  641333 tattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattga 641277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 827239 - 827083
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| |||||| ||||| ||||||||| | |||| ||||||| ||||||||||||||||| |||| |  | || ||| ||||| ||||||| |    
T  827239 aaaccaacaacaacaacttatttcacaacaacaaattatgattcatgcatacccaagccatgaattagcatccataacatcacttaacaataacaacatc 827140  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattga 235  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  827139 tattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattga 827083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 68 - 242
Target Start/End: Complemental strand, 16039176 - 16039000
Alignment:
Q  68 acccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 165  Q
    ||||||||| || |||||| |||| |||||| ||||| ||||||||| | |||||||||||| | ||||||||| ||||| |||| |  | || ||| ||    
T  16039176 acccattttcaccaaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgcatatccaagccataaattagcatccataacatcacttaa 16039077  T
Q  166 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    ||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||    
T  16039076 caacaacaacatctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcactaattgagcataat 16039000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 96 - 233
Target Start/End: Complemental strand, 20648087 - 20647949
Alignment:
Q  96 ctcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 194  Q
    |||| ||||| ||||||| ||||||||||||||||||||||||||| |||| ||||||  | |||||  | ||||||| ||| | ||||||||||||||     
T  20648087 ctcacttctccacaacaaatcatgaatcatgcaaacccaagccatggattaacatcaacaacatgacctagcaacaacgacatcaattgatcatgaaact 20647988  T
Q  195 tatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    ||||||||||||||||||||   ||||||||||||||||    
T  20647987 tatcacaattcatcaacaacatagcataattcaccaatt 20647949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 96 - 233
Target Start/End: Complemental strand, 20654163 - 20654025
Alignment:
Q  96 ctcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 194  Q
    |||| ||||| ||||||| ||||||||||||||||||||||| |||||||| ||||||  | |||||  | ||||||| ||| | ||||||||||||||     
T  20654163 ctcacttctccacaacaaatcatgaatcatgcaaacccaagcaatgaattaacatcaacaacatgacctagcaacaacgacatcaattgatcatgaaact 20654064  T
Q  195 tatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    ||||||||||||||||||||   ||||||||||||||||    
T  20654063 tatcacaattcatcaacaacttagcataattcaccaatt 20654025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 227
Target Start/End: Complemental strand, 39447046 - 39446892
Alignment:
Q  73 ttttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 171  Q
    |||||| |||| | |||| ||| |||||||||||||||||| |||| ||||||||| |||||||||||||||||| |||||  | || ||| | ||||||    
T  39447046 ttttaccaaactaccaacaacatctcatttctcaacaacaaatcat-aatcatgcatacccaagccatgaattattatcaacaacatcacttagcaacaa 39446948  T
Q  172 caacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattca 227  Q
    ||||| | |||||||||||| | |||||||||||| |||||||   ||||||||||    
T  39446947 caacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattca 39446892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 65 - 227
Target Start/End: Original strand, 38533607 - 38533770
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 163  Q
    |||||||||||||||||  |  |||| ||| ||||||||||| |||||| |||||||| ||||| ||||||||||||||||||||||||  | || ||      
T  38533607 tcaacccattttacaaagtctccaacaacatctcatttctcatcaacaaatcatgaattatgcacacccaagccatgaattatcatcaacaacatcacct 38533706  T
Q  164 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattca 227  Q
    | ||||||||||| | ||||| |||||| |  ||||||||||| |||||||   ||||||||||    
T  38533707 agcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacatagcataattca 38533770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 65 - 214
Target Start/End: Original strand, 5854572 - 5854722
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 163  Q
    ||||||||||||||||||||| |||| |||||||| |||||| || ||| |||||| | ||| | ||||||||||||||| |||| |||  |||| |||     
T  5854572 tcaacccattttacaaaaccaacaacaacaactcaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcactt 5854671  T
Q  164 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaac 214  Q
    | ||||||||||| | ||||| |||||| |  ||||||||||| |||||||    
T  5854672 agcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaac 5854722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 20567265 - 20567200
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaa 152  Q
    |||| ||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  20567265 caacaacatctcatttctcaacacaaatcatgaatcatgcaaacccaagccatgaattatcatcaa 20567200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 20567424 - 20567335
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaaca 176  Q
    |||| ||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  | |||||  | |||||||||||    
T  20567424 caacaacatctcatttctcaacacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaaca 20567335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 20573617 - 20573528
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaaca 176  Q
    |||| ||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  | |||||  | |||||||||||    
T  20573617 caacaacatctcatttctcaacacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaaca 20573528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 188
Target Start/End: Original strand, 25122543 - 25122618
Alignment:
Q  112 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcat 188  Q
    ||||||||||||||||| |||||||||||||||||||||||  | |||||||||||||||||||| | |||||||||    
T  25122543 aatcatgaatcatgcaa-cccaagccatgaattatcatcaacaacatgactaaacaacaacaacatctattgatcat 25122618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 225
Target Start/End: Original strand, 21680994 - 21681121
Alignment:
Q  99 atttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatat 197  Q
    ||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||  | || ||  | ||  ||||||| | ||||||||||||||  ||    
T  21680994 atttctccacaacaaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacataccagtaacaacatcaattgatcatgaaactaat 21681093  T
Q  198 cacaattcatcaacaaccatgcataatt 225  Q
    ||||||||| ||||||| | ||||||||    
T  21681094 cacaattcaacaacaacaaagcataatt 21681121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 29759933 - 29760005
Alignment:
Q  98 catttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaac 169  Q
    |||||||||||||||| ||||||||||||||||||||||||||  || ||||||||  |||||||||||||||    
T  29759933 catttctcaacaacaaatcatgaatcatgcaaacccaagccatatatcatcatcaacaatatgactaaacaac 29760005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 214
Target Start/End: Complemental strand, 22736127 - 22735977
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 163  Q
    |||||||||||||||||  || |||| ||||||||||| ||| |||||| |||||||| ||||| ||||||||||||||||| || |||  | || | |     
T  22736127 tcaacccattttacaaagtcaccaacaacaactcatttttcatcaacaattcatgaattatgcacacccaagccatgaattaacaacaacaacatcagtt 22736028  T
Q  164 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaac 214  Q
    | ||| ||||||| | ||||| |||||| | ||||||||| || |||||||    
T  22736027 agcaagaacaacatcaattgaacatgaatcttatcacaatccaacaacaac 22735977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 233
Target Start/End: Original strand, 23837163 - 23837325
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||| ||||||||| || | ||||||||||||||| |||||| |||||||| ||| | ||||||||||||||| |||| |||  | || ||| | |||||    
T  23837163 atttcacaaaaccaccaccaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaaca 23837262  T
Q  171 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    |||||| | ||||| |||||  | || ||||||||| |||||||   |||||||||| |||||    
T  23837263 acaacatcaattgaacatgactcttaccacaattcaacaacaacatagcataattcaacaatt 23837325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 214
Target Start/End: Original strand, 26011452 - 26011602
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 163  Q
    ||||||||||||||||||||| |||| |||||| | |||||| || ||| |||||| | ||| | ||||||||||||||| |||| |||  |||| |||     
T  26011452 tcaacccattttacaaaaccaacaacaacaacttaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcactt 26011551  T
Q  164 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaac 214  Q
    | ||||||||||| | ||| | |||||| |  ||||||||||| |||||||    
T  26011552 agcaacaacaacatcaattcaacatgaatctcatcacaattcaacaacaac 26011602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 214
Target Start/End: Original strand, 33528383 - 33528533
Alignment:
Q  64 atcaacccattttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgact 162  Q
    ||||||||||||||||||| || |||| ||||| ||||||||| || | |||||||| | ||| | ||||||||||||||| |||| |||| ||||  ||    
T  33528383 atcaacccattttacaaaatcaacaacaacaacccatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaaa-atatctct 33528481  T
Q  163 aaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaac 214  Q
     | ||||||||||| | ||| | |||||| |  ||||||||||| |||||||    
T  33528482 tagcaacaacaacatcaattaaacatgaatctcatcacaattcaacaacaac 33528533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 242
Target Start/End: Complemental strand, 24385988 - 24385871
Alignment:
Q  116 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaacc 215  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | |||||||         || ||||||||||||||||     
T  24385988 atgaatcatgcatacccaagccatgaattagcatccataaaatcacttaacaacaacaacatctattgatc---------attacaattcatcaacaaca 24385898  T
Q  216 atgcataattcaccaattgagtataat 242  Q
    |||| |||||||||||||||| |||||    
T  24385897 atgcttaattcaccaattgagcataat 24385871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 15969799 - 15969860
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatca 148  Q
    |||| ||||||||||||||  | |||||||||||| ||||| ||||||||||||||||||||    
T  15969799 caacaacaactcatttctcctctacaatcatgaattatgcacacccaagccatgaattatca 15969860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 20561804 - 20561751
Alignment:
Q  180 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    |||||||||||||| ||||||||||||||||||||   ||||||||||||||||    
T  20561804 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaatt 20561751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 214
Target Start/End: Original strand, 15933256 - 15933406
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 163  Q
    ||||||||||||||||||||| |||| |||||||| |||||| |  | |||||||| | |   | ||||||||||||||| |||| |||  |||| |||     
T  15933256 tcaacccattttacaaaaccaacaacaacaactcaattctcatcttcaaatcatgatttacaaacacccaagccatgaatcatcaacaacaatatcactt 15933355  T
Q  164 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaac 214  Q
    | ||||||||||| | ||||| |||||| |  |||| |||||| |||||||    
T  15933356 agcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaac 15933406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 23226368 - 23226240
Alignment:
Q  64 atcaacccattt--tacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatga 160  Q
    ||||||||||||  |||||||||| |||| ||||  |||||||||  | ||| |||||||| ||| | ||||||||||||||| |||| |||  |||| |    
T  23226368 atcaacccatttcttacaaaaccaacaacaacaatccatttctcataatcaaatcatgaattatgaatacccaagccatgaatcatcaacaacaatatca 23226269  T
Q  161 ctaaacaacaacaacaaccattgatcatg 189  Q
    || ||||||||||||| | ||||| ||||    
T  23226268 cttaacaacaacaacatcaattgaacatg 23226240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 143
Target Start/End: Complemental strand, 21198434 - 21198362
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaat 143  Q
    ||||||| |||||| |||| ||||||||||||||| | || |||||||||| ||| | |||||||||||||||    
T  21198434 attttaccaaaccaccaacaacaactcatttctcatccacaaatcatgaattatgaacacccaagccatgaat 21198362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 23149736 - 23149865
Alignment:
Q  64 atcaacccattt--tacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatga 160  Q
    ||||||||||||  |||||||||| |||| ||||||||||| ||| || | |||||||||| ||| | || |||||||||||| |||| |||  | || |    
T  23149736 atcaacccatttcttacaaaaccaacaacaacaactcatttttcatcatcaaatcatgaattatgaatactcaagccatgaatcatcaacaacaacatca 23149835  T
Q  161 ctaaacaacaacaacaaccattgatcatga 190  Q
    || | |||||| |||||| ||||| |||||    
T  23149836 cttagcaacaaaaacaactattgaacatga 23149865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 214
Target Start/End: Complemental strand, 27233348 - 27233206
Alignment:
Q  73 ttttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 171  Q
    ||||||||||||| |||| |||||| ||||||||  | | |||||||| | ||| | ||||||||||||||| |||| |||  ||||  || ||||||||    
T  27233348 ttttacaaaaccaacaacaacaacttatttctcattatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatctcttaacaacaa 27233249  T
Q  172 caacaaccattgatcatgaaacatatcacaattcatcaacaac 214  Q
    ||||| | ||| | |||||  |  ||||||||||| |||||||    
T  27233248 caacatcaattaaacatgattctcatcacaattcaacaacaac 27233206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 214
Target Start/End: Complemental strand, 18261762 - 18261610
Alignment:
Q  64 atcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgac 161  Q
    ||||||||||||| ||||||||| |||| |||||| | |||||| || ||| |||||| | ||| | |||||||| |||||| |||| |||  ||||  |    
T  18261762 atcaacccatttttacaaaaccaacaacaacaacttaattctcatcatcaactcatgatttatgaacacccaagctatgaatcatcaacaacaatatctc 18261663  T
Q  162 taaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaac 214  Q
    | ||||||||||||| | ||| | |||||  |  ||||||||||| |||||||    
T  18261662 ttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaacaac 18261610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 178
Target Start/End: Original strand, 22742717 - 22742833
Alignment:
Q  64 atcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgac 161  Q
    ||||||||||||| ||||||||| |||| |||||| |||||||| |||||| | | || | ||| | |||||||||| |||| |||| |||  ||||  |    
T  22742717 atcaacccatttttacaaaaccaacaacaacaacttatttctcatcaacaaaccaagatttatgaacacccaagccacgaatcatcaacaacaatattcc 22742816  T
Q  162 taaacaacaacaacaac 178  Q
    | |||||||||||||||    
T  22742817 tcaacaacaacaacaac 22742833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 3e-63; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 80 - 242
Target Start/End: Complemental strand, 111550 - 111388
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaacc 179  Q
    |||||| |||| |||| | |||||||||||||||   ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  111550 aaaccaacaacaacaatttatttctcaacaacaaatttgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaacaacaacaacaacc 111451  T
Q  180 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  111450 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 111388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 37 - 233
Target Start/End: Complemental strand, 7284376 - 7284180
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 136  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  7284376 acatcgtcaaaatcaaacttctccattatcaacccatttaacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgcaaactcaagc 7284277  T
Q  137 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    |||||||||| |||||  | |||||  | ||||||||||| | |||||||||||||| |||||||||||| ||||||| | | ||||||||||||||    
T  7284276 catgaattattatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaaggataattcaccaatt 7284180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 68 - 242
Target Start/End: Complemental strand, 32494341 - 32494165
Alignment:
Q  68 acccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 165  Q
    ||||||||| || |||||| |||| |||| | ||||||||||||||| | |||||||||||| || ||||||||||||||||||||| ||||||||||||    
T  32494341 acccattttcaccaaaccaacaacaacaatttatttctcaacaacaaattatgaatcatgcatacacaagccatgaattatcatcaatcatatgactaaa 32494242  T
Q  166 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  32494241 caacaacaacaaccattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 32494165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 98 - 242
Target Start/End: Original strand, 126406 - 126551
Alignment:
Q  98 catttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacata 196  Q
    |||||||||||||||| ||||||||||||||||||||||||||| || ||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  126406 catttctcaacaacaaatcatgaatcatgcaaacccaagccatgtatcatcatcaacagtatgactaaacaacaacaacaaccattgatcatgaaacata 126505  T
Q  197 tcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  126506 tcacaattcatcaacaaccatgcataattcaccaattgagcataat 126551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 39046890 - 39046740
Alignment:
Q  87 caaccacaactcatttctcaacaaca-atcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| ||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||  | |||||||||||||||||||||| ||||||    
T  39046890 caacaacatctcatttctcaacaacagatcaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgat 39046791  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39046790 catgaaacatatcacaattcatcaacaacaatgcataattcaccaattgag 39046740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 80 - 236
Target Start/End: Original strand, 11287390 - 11287547
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  | |||||| | ||||||||||| |    
T  11287390 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaacaacaacatc 11287489  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
     | |||||||||||| ||||||||||||||||||||   |||||||||||||||||||    
T  11287490 aactgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgag 11287547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 42056565 - 42056408
Alignment:
Q  87 caaccacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattga 184  Q
    |||| |||||| ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||  |  |||| ||| ||||||||||||| | |||||    
T  42056565 caacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcattcataatatcacttaacaacaacaacatctattga 42056466  T
Q  185 tcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42056465 tcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 42056408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 35094797 - 35094946
Alignment:
Q  87 caaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||| ||| |||| ||||||||||||||||||| ||||||||||  | ||||||||||||||||| |||| ||||||    
T  35094797 caacaacatctcatttctcaacaacaaatcaagaattatgcaaacccaagccatgatttatcatcaacaacatgactaaacaacaacagcaac-attgat 35094895  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||||| | ||||||||||||||||  ||||||||||||||||||||    
T  35094896 catgaaacatttaacaattcatcaacaacagtgcataattcaccaattgag 35094946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 116 - 242
Target Start/End: Complemental strand, 2190431 - 2190305
Alignment:
Q  116 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaacc 215  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||| ||||| | ||||||||||||||||||||||||||||||||||||    
T  2190431 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacatcaacatctattgatcatgaaacatatcacaattcatcaacaacc 2190332  T
Q  216 atgcataattcaccaattgagtataat 242  Q
    ||||||||||||||||||||| |||||    
T  2190331 atgcataattcaccaattgagcataat 2190305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 80 - 242
Target Start/End: Original strand, 2028893 - 2029057
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa 177  Q
    |||||| |||| |||||| ||||| |||||||||  | |||||||||||| ||||||| ||||||||| |||| |  | || ||| |||||| ||||||     
T  2028893 aaaccaacaacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagtcatgaattagcatccataacatcacttaacaacgacaacat 2028992  T
Q  178 ccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    | |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||    
T  2028993 ctattgatcatgaaacttatcacaattcatcaacaatcatgcataattcaccaattgagcataat 2029057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 12758968 - 12759117
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 186  Q
    |||| ||| |||||||||| |||  |||||| |||| ||||||||||||||||||||||||| |||  | |||||| ||||||||||||||| |||||||    
T  12758968 caacaacatctcatttctccacacaaatcataaatcctgcaaacccaagccatgaattatcaccaacaacatgacttaacaacaacaacaacaattgatc 12759067  T
Q  187 atgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||| ||||| |||||| |||||||   |||||||||||||||||||    
T  12759068 atgaaacttatcataattcaccaacaacatagcataattcaccaattgag 12759117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 92 - 242
Target Start/End: Original strand, 3049568 - 3049719
Alignment:
Q  92 acaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatga 190  Q
    |||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | |||||||||||    
T  3049568 acaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaacaacatctattgatcatga 3049667  T
Q  191 aacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    ||| ||||||||||||||||||||   ||||||||||||||||||| |||||    
T  3049668 aacttatcacaattcatcaacaacatagcataattcaccaattgagcataat 3049719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 15822698 - 15822548
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| ||||||||||||| |||| | |||||||||||||||||||||||||||| ||||||||  | |||||  | ||||||||||| | ||||||    
T  15822698 caacaacatctcatttctcaaccacaaaccatgaatcatgcaaacccaagccatgaatgatcatcaacaacatgacatatcaacaacaacatcaattgat 15822599  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||| |||||||||||| ||||||| | ||||||||||||| |||||    
T  15822598 catgaaacttatcacaattcaacaacaacaaagcataattcaccatttgag 15822548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 236
Target Start/End: Original strand, 3894998 - 3895155
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| |||||| ||||  ||||||||| | |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| |    
T  3894998 aaaccaacaacaacaacttattttacaacaacaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatc 3895097  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
     |||||||||||||| ||||||||||||||||||||   |||||||||||||||||||    
T  3895098 tattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgag 3895155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 233
Target Start/End: Complemental strand, 26070531 - 26070384
Alignment:
Q  87 caaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| |||||| ||||||||||||||| |||||||||||||| ||||||||||||||| |||||| |  | || ||| | ||||||||||| | ||||||    
T  26070531 caacaacaacttatttctcaacaacaaatcatgaatcatgcatacccaagccatgaataatcatccacaacatcacttagcaacaacaacatcaattgat 26070432  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    |||||||| ||||||||||||||||||||    |||||||||||||||    
T  26070431 catgaaacttatcacaattcatcaacaacataacataattcaccaatt 26070384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 233
Target Start/End: Complemental strand, 26094318 - 26094171
Alignment:
Q  87 caaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| |||||| ||||||||||||||| |||||||||||||| ||||||||||||||| |||||| |  | || ||| | ||||||||||| | ||||||    
T  26094318 caacaacaacttatttctcaacaacaaatcatgaatcatgcatacccaagccatgaataatcatccacaacatcacttagcaacaacaacatcaattgat 26094219  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    |||||||| ||||||||||||||||||||    |||||||||||||||    
T  26094218 catgaaacttatcacaattcatcaacaacataacataattcaccaatt 26094171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 214
Target Start/End: Complemental strand, 45452432 - 45452305
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 186  Q
    |||| ||| |||||||||| |||  ||||||||||||||| |||||||||||||||||||||||||  | |||||  | |||||||||| || |||||||    
T  45452432 caacaacatctcatttctccacacaaatcatgaatcatgccaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacgacaattgatc 45452333  T
Q  187 atgaaacatatcacaattcatcaacaac 214  Q
    ||||||| ||||||||||||||||||||    
T  45452332 atgaaacttatcacaattcatcaacaac 45452305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 112 - 236
Target Start/End: Original strand, 47289788 - 47289911
Alignment:
Q  112 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaac 211  Q
    ||||||||||||||||| | ||||||||||||||||||||   | |||||| |||| ||||| |||| |||||||||||||| | |||||||||||||||    
T  47289788 aatcatgaatcatgcaa-cacaagccatgaattatcatcatcaacatgacttaacagcaacagcaacaattgatcatgaaacttttcacaattcatcaac 47289886  T
Q  212 aaccatgcataattcaccaattgag 236  Q
    ||| | |||||||||||||||||||    
T  47289887 aacaaagcataattcaccaattgag 47289911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 236
Target Start/End: Complemental strand, 12248395 - 12248237
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| ||| |||||||||||||||||| |||||||||||||| ||||||| |||| ||||||||| |  | || ||| | ||||||||||| |    
T  12248395 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcatacccaagtcatgcattatcatccacaacatcacttagcaacaacaacatc 12248296  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgag 236  Q
    ||||||||||||| | |||||||||||| |||||||   ||||||||| ||||||||||    
T  12248295 cattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgag 12248237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 96 - 236
Target Start/End: Complemental strand, 16570264 - 16570122
Alignment:
Q  96 ctcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 194  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |  | || ||| | ||||||||||| | ||||||||||||||     
T  16570264 ctcatttctcaacaacaaatcatgaatcatgcatacccaagccatgaattatcatccacgacatcacttagcaacaacaacatcaattgatcatgaaact 16570165  T
Q  195 tatcacaattcatcaacaaccatgcataattc-accaattgag 236  Q
    |||| ||||||| |||||||   ||||||||| ||||||||||    
T  16570164 tatctcaattcaacaacaacatagcataattcaaccaattgag 16570122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 96 - 236
Target Start/End: Original strand, 16595398 - 16595540
Alignment:
Q  96 ctcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 194  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |  | || ||| | ||||||||||| | ||||||||||||||     
T  16595398 ctcatttctcaacaacaaatcatgaatcatgcatacccaagccatgaattatcatccacgacatcacttagcaacaacaacatcaattgatcatgaaact 16595497  T
Q  195 tatcacaattcatcaacaaccatgcataattc-accaattgag 236  Q
    |||| ||||||| |||||||   ||||||||| ||||||||||    
T  16595498 tatctcaattcaacaacaacatagcataattcaaccaattgag 16595540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 112 - 236
Target Start/End: Original strand, 44865234 - 44865360
Alignment:
Q  112 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgact---aaacaacaacaacaaccattgatcatgaaacatatcacaattcatc 208  Q
    |||||||||| |||||| |||||||||||||||||||| ||  | ||||||    ||||||||||||||| ||| |||||||||| ||||||||||||||    
T  44865234 aatcatgaattatgcaa-cccaagccatgaattatcataaactacatgacttaacaacaacaacaacaacaattaatcatgaaacttatcacaattcatc 44865332  T
Q  209 aacaaccatgcataattcaccaattgag 236  Q
    |||||  |||||||||||||||||||||    
T  44865333 aacaaaaatgcataattcaccaattgag 44865360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 72 - 242
Target Start/End: Complemental strand, 1937290 - 1937131
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||| ||||||||| |||| | ||  ||||||||||||| || | |||||||||||||||||||| |||| || ||||||||  ||||||||||||| ||    
T  1937290 atttcacaaaaccaccaacaataatccatttctcaacaaaaaattatgaatcatgcaaacccaagtcatgtatcatcatcaacaatatgactaaacatca 1937191  T
Q  171 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    ||||||||||||||||||            ||||||||||||||||| |||||||||||||||||| |||||    
T  1937190 acaacaaccattgatcat------------aattcatcaacaaccatacataattcaccaattgagcataat 1937131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 73 - 214
Target Start/End: Complemental strand, 49047955 - 49047813
Alignment:
Q  73 ttttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 171  Q
    |||||| |||| | |||| ||| ||| |||||||||||||| |||||||||||||| |||||||||||||||||||| |||  | || ||| | ||||||    
T  49047955 ttttaccaaactaccaacaacatctcgtttctcaacaacaaatcatgaatcatgcatacccaagccatgaattatcagcaacaacatcacttagcaacaa 49047856  T
Q  172 caacaaccattgatcatgaaacatatcacaattcatcaacaac 214  Q
    ||||| | |||||||||||| | |||||||||||| |||||||    
T  49047855 caacatcaattgatcatgaatcttatcacaattcaacaacaac 49047813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 236
Target Start/End: Original strand, 13274753 - 13274918
Alignment:
Q  73 ttttacaaaaccagcaaccacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 171  Q
    |||||| |||| | |||| ||| ||||||||||||||||||  ||||||||||||| ||| ||||||||||| ||||||||  | || ||| | ||||||    
T  13274753 ttttaccaaactaccaacaacatctcatttctcaacaacaaaacatgaatcatgcataccaaagccatgaatcatcatcaacaacatcacttagcaacaa 13274852  T
Q  172 caacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgag 236  Q
    ||||| | |||||||||||| | |||||||||||| |||||||   ||||||||| ||||||||||    
T  13274853 caacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgag 13274918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 236
Target Start/End: Complemental strand, 12370127 - 12369957
Alignment:
Q  68 acccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 165  Q
    ||||||||| || |||||| |||| |||||| ||||||||| ||||| |||||||||||||| ||| ||||||||||| || ||  |  | || ||| |     
T  12370127 acccattttcaccaaaccaacaactacaacttatttctcaataacaaatcatgaatcatgcatacctaagccatgaataattatgcacaacatcacttag 12370028  T
Q  166 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||||||| | ||| |||||||||  |||||||||||| ||||||| | |||||||||||||||||||    
T  12370027 caacaacaacatcaattaatcatgaaagttatcacaattcaacaacaacaaggcataattcaccaattgag 12369957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 190
Target Start/End: Complemental strand, 14272203 - 14272049
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaag 135  Q
    ||||||| ||||| |||||||||||| |||||||||||||||||||||| || | ||||||||||||||| || | |||||||||| ||| | || ||||    
T  14272203 acatcattaaaataaaacttcttcatcatcaacccattttacaaaaccaccaccaacaactcatttctcatcatctaatcatgaattatgaacactcaag 14272104  T
Q  136 ccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatga 190  Q
    |||||||| |||| |||  |||| | | | ||||||||||| | ||||| |||||    
T  14272103 ccatgaatcatcaacaacaatatcatttagcaacaacaacatcaattgaacatga 14272049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 236
Target Start/End: Original strand, 143652 - 143769
Alignment:
Q  112 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaac 211  Q
    |||||||||| |||||| |||||||||||||||||||| ||  | |||||| |||||||||||      ||||||||||||| | |||||||||||||||    
T  143652 aatcatgaattatgcaa-cccaagccatgaattatcattaacaacatgacttaacaacaacaa------ttgatcatgaaacttttcacaattcatcaac 143744  T
Q  212 aaccatgcataattcaccaattgag 236  Q
    ||| | |||||||||||||||||||    
T  143745 aacaaagcataattcaccaattgag 143769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 242
Target Start/End: Complemental strand, 17224220 - 17224048
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||||||||||||| |||| ||||||||||||||| |||| |||||||||| ||| | ||||||||||||||| ||||| ||  | || ||| | |||||    
T  17224220 attttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcattaacaacatcacttagcaaca 17224121  T
Q  171 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaa-ttgagtataat 242  Q
    |||||| | ||||| |||||  | ||  |||||||| |||||||   |||||||||| ||| |||||||||||    
T  17224120 acaacatcaattgaacatgactcttacaacaattcaacaacaacatagcataattcaacaatttgagtataat 17224048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 65 - 214
Target Start/End: Complemental strand, 16915217 - 16915067
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 163  Q
    ||||||||||||||||||||| |||| |||||||| |||||  || ||| |||||| | ||| | ||||||||||||||| |||| |||  ||||||||     
T  16915217 tcaacccattttacaaaaccaacaacaacaactcaattctcttcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatgactt 16915118  T
Q  164 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaac 214  Q
    | ||||||||||| | ||||| |||||| |  |||| |||||| |||||||    
T  16915117 agcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaac 16915067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 65 - 214
Target Start/End: Original strand, 48356602 - 48356752
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 163  Q
    ||||||||||||||||||||| |||| |||||||| |||||| || | |||||||| | ||| | ||||||||||||||| |||| |||  |||| |||     
T  48356602 tcaacccattttacaaaaccaacaacaacaactcaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcactt 48356701  T
Q  164 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaac 214  Q
    | ||||||||||| | ||||| |||||| |  |||| |||||| |||||||    
T  48356702 agcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaac 48356752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 242
Target Start/End: Original strand, 13377485 - 13377666
Alignment:
Q  64 atcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgac 161  Q
    ||||||||||||| || |||||| |||| |||||| |||||||| || ||| |||||| | ||| | ||||||||||||||| ||||||||  | || ||    
T  13377485 atcaacccattttcaccaaaccaacaacaacaacttatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcatcaacaacattac 13377584  T
Q  162 taaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaa-ttgagtataat 242  Q
    | | ||||||||||| | ||||| |||||| | |||||||||||| |||||||   |||||||| | ||| |||||||||||    
T  13377585 ttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataattaatcaatttgagtataat 13377666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 4446168 - 4446249
Alignment:
Q  64 atcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaat 143  Q
    ||||||||||||| ||||||||| |||| |||||||||||| || || ||| |||||| | ||| | |||||||||||||||    
T  4446168 atcaacccatttttacaaaaccaacaacaacaactcatttcacatcatcaattcatgatttatgaacacccaagccatgaat 4446249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 14935319 - 14935400
Alignment:
Q  64 atcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaat 143  Q
    ||||||||||||| ||||||||| |||| |||||| |||||||| |||| |||||||| | ||| | |||||| ||||||||    
T  14935319 atcaacccatttttacaaaaccaacaacaacaactgatttctcatcaacaaatcatgatttatgaacacccaaaccatgaat 14935400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 15362912 - 15362993
Alignment:
Q  64 atcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaat 143  Q
    ||||||||||||| ||||||||| |||| |||||| |||||||| |||| |||||||| | ||| | |||||| ||||||||    
T  15362912 atcaacccatttttacaaaaccaacaacaacaactgatttctcatcaacaaatcatgatttatgaacacccaaaccatgaat 15362993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 236
Target Start/End: Complemental strand, 13863154 - 13863046
Alignment:
Q  129 acccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-a 227  Q
    |||||||||||| || || | |||  |||| ||| | ||||||||||||| ||||| ||||||   |||||||||||| |||||||   ||||||||| |    
T  13863154 acccaagccatgcatcattaacaacaatatcacttagcaacaacaacaacaattgaacatgaatattatcacaattcaacaacaacatagcataattcaa 13863055  T
Q  228 ccaattgag 236  Q
    |||||||||    
T  13863054 ccaattgag 13863046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 148
Target Start/End: Complemental strand, 34241477 - 34241393
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatca 148  Q
    ||||||| ||||||||||||| |||| ||||||||||| ||| || | |||||||| | ||| | || |||||||||||| ||||    
T  34241477 tcaaccctttttacaaaaccaacaacaacaactcatttttcatcatcaaatcatgatttatgaacactcaagccatgaatcatca 34241393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 37 - 233
Target Start/End: Complemental strand, 430 - 234
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 136  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| | | |||||||||||||||||||||||||||||||||||||||||    
T  430 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaaaagctcatttctcaacaacaatcatgaatcatgcaaacccaagc 331  T
Q  137 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
     |||||||||||||||  | |||||  | ||||||||||| | ||||||||| |||| |||||||||||| ||||||| |  |||||||||| ||||    
T  330 tatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcattaaacttatcacaattcaacaacaacaaaacataattcacgaatt 234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 6679 - 6603
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||| |||||||||||||    
T  6679 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaagaacaactcaattctcaacaacaa 6603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 72 - 242
Target Start/End: Complemental strand, 6373 - 6202
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||| ||||||||| |||| ||||  |||||||||||||||| |||||||||||||||||||||| |||| || ||||||||  |||| |||||||||||    
T  6373 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagtcatgtatcatcatcaacaatattactaaacaaca 6274  T
Q  171 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6273 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 6202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 72 - 242
Target Start/End: Complemental strand, 31570 - 31399
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||| ||||||||| |||| ||||  |||||||||||||||| | |||||||||||||||| |||||||| || ||||||||  ||||||||||||||||    
T  31570 atttcacaaaaccaccaacaacaatccatttctcaacaacaaattatgaatcatgcaaacctaagccatgtatcatcatcaacaatatgactaaacaaca 31471  T
Q  171 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31470 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 31399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 72 - 242
Target Start/End: Original strand, 41274 - 41445
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||| ||||||||| |||| ||||  |||||||||||||||| | |||||||||||||||| |||||||| || ||||||||  ||||||||||||||||    
T  41274 atttcacaaaaccaccaacaacaatccatttctcaacaacaaattatgaatcatgcaaacctaagccatgtatcatcatcaacaatatgactaaacaaca 41373  T
Q  171 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41374 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 41445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 116; Significance: 4e-59; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 80 - 242
Target Start/End: Complemental strand, 12802 - 12639
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| |||| | ||||||||||||||| | |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12802 aaaccaacaacaacaatttatttctcaacaacaaattatgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaacaacaacaacaac 12703  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  12702 cattaatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcataat 12639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 80 - 213
Target Start/End: Complemental strand, 19183 - 19049
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| |||| | ||||||||||||||| | |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19183 aaaccaacaacaacaatttatttctcaacaacaaattatgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaacaacaacaacaac 19084  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaa 213  Q
    |||| ||||||||||||||||||||||||||||||    
T  19083 cattaatcatgaaacatatcacaattcatcaacaa 19049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 7e-58; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 59 - 242
Target Start/End: Original strand, 14951713 - 14951898
Alignment:
Q  59 tcattatcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 156  Q
    |||| ||||||||||||| || ||| || |||| ||||  |||||||||||||||| ||||||||||||||||||||||||||  || ||||||||  ||    
T  14951713 tcataatcaacccattttcaccaaaacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatatatcatcatcaacaat 14951812  T
Q  157 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14951813 atgactaaataacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 14951898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 72 - 235
Target Start/End: Complemental strand, 25119498 - 25119333
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaac 169  Q
    |||| ||||||||| |||| ||||  ||||||||||||||||  | ||||||||||||||||||||||||| || || |||||  |||||||||||||||    
T  25119498 atttcacaaaaccaccaacaacaatccatttctcaacaacaaaattatgaatcatgcaaacccaagccatgtatcattatcaacaatatgactaaacaac 25119399  T
Q  170 aacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattga 235  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25119398 aacaacaaccattgatcatgaaacatatcacaattcatcaaaaaccatgcataattcaccaattga 25119333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 53705000 - 53704850
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||| | | |||| ||||||||||||||||||||||||||||||  | |||||||||||||||||||||| ||||||    
T  53705000 caacaacatctcatttctcaacaacaaaccaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgat 53704901  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53704900 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 53704850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 72 - 242
Target Start/End: Complemental strand, 5682817 - 5682646
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||| ||||||||| |||| ||||  |||||||||||||||| |||||||||||||||||||||| |||  || ||||||||  |||||| |||| ||||    
T  5682817 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagacatatatcatcatcaacaatatgaataaaaaaca 5682718  T
Q  171 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5682717 acaacaaccaataatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 5682646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 96 - 240
Target Start/End: Complemental strand, 55376855 - 55376710
Alignment:
Q  96 ctcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 194  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  | || | | ||||||||||||||| ||||||||||||||     
T  55376855 ctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacataatttaacaacaacaacaacaattgatcatgaaact 55376756  T
Q  195 tatcacaattcatcaacaaccatgcataattcaccaattgagtata 240  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||    
T  55376755 tatcacaattcatcaacaacaatgtataattcaccaattgagtata 55376710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 72 - 236
Target Start/End: Original strand, 34395222 - 34395387
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||| ||||||||| |||| ||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||  | |||||  | |||||    
T  34395222 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaactcaagccatgaattatcatcaacaacatgacatagcaaca 34395321  T
Q  171 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||| | |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  34395322 acaacatcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgag 34395387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 87 - 240
Target Start/End: Complemental strand, 23270201 - 23270047
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| ||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||| | ||||||    
T  23270201 caacaacatctcatttctcaaccacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaacaacatcaattgat 23270102  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtata 240  Q
    ||||| || |||||||||||||||||||| |||||||||||| ||||||||||||    
T  23270101 catgatacttatcacaattcatcaacaacaatgcataattcatcaattgagtata 23270047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 44055895 - 44056045
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||  | ||| |||||| ||||||||| | ||||||    
T  44055895 caacaacatctcatttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatggctaaaccacaacaacatcaattgat 44055994  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||| |||||||||||||||||||  |||||||||||||||||||||    
T  44055995 catgaaacttatcacaattcatcaacaataatgcataattcaccaattgag 44056045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 16732149 - 16732299
Alignment:
Q  87 caaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  | |||||| | ||||||| ||| | ||||||    
T  16732149 caacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaacaacgacatcaattgat 16732248  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||| ||||||||||||||||||||   |||||||||||||||||||    
T  16732249 catgaaacttatcacaattcatcaacaacatagcataattcaccaattgag 16732299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 96 - 236
Target Start/End: Original strand, 44346816 - 44346957
Alignment:
Q  96 ctcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 194  Q
    |||||||||||||||||| | | |||| ||||||||||||||||||||||||||||||  | || |||||||||||||||||||  ||||||||||||||    
T  44346816 ctcatttctcaacaacaaaccaagaattatgcaaacccaagccatgaattatcatcaacgacatcactaaacaacaacaacaacatttgatcatgaaaca 44346915  T
Q  195 tatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||||||||| |||||| ||| |||||||||||||||||    
T  44346916 tatcacaattcatgaacaacaatgtataattcaccaattgag 44346957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 21959718 - 21959580
Alignment:
Q  99 atttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatat 197  Q
    |||||||||| |||| | ||||||||||||| |||||||||||||||||||||||  | |||||||||||||||||||| | |||||||||||||| |||    
T  21959718 atttctcaaccacaaactatgaatcatgcaagcccaagccatgaattatcatcaacaacatgactaaacaacaacaacatcaattgatcatgaaacttat 21959619  T
Q  198 cacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||||||||||||   |||||||||||||||||||    
T  21959618 cacaattcatcaacaacatagcataattcaccaattgag 21959580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 234
Target Start/End: Complemental strand, 53907963 - 53907818
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||| | | |||| ||||||||||||||||||||||||||||||  | |||||||| ||||||||||||   |||||    
T  53907963 caacaacatctcatttctcaacaacaaaccaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaatcaacaacaacaa---ttgat 53907867  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattg 234  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||    
T  53907866 catgaaacatttcacaattcatcaacaacaatgcataattcaccaattg 53907818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 128 - 236
Target Start/End: Original strand, 30457925 - 30458033
Alignment:
Q  128 aacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattca 227  Q
    ||||||||||||||||||||||||| || |||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||| |||| |||||||    
T  30457925 aacccaagccatgaattatcatcaaccacatgacttaacaacaacaacaacaattgatcatgaaacttatcacaattcatcaacaacaatgcgtaattca 30458024  T
Q  228 ccaattgag 236  Q
    |||||||||    
T  30458025 ccaattgag 30458033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 820153 - 820033
Alignment:
Q  112 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaac 211  Q
    ||||||||||||||||| |||||||||||||||||||||||  | |||||| ||||||||||||||   ||||||||||||| |||||||||||||||||    
T  820153 aatcatgaatcatgcaa-cccaagccatgaattatcatcaacaacatgacttaacaacaacaacaa---ttgatcatgaaacttatcacaattcatcaac 820058  T
Q  212 aaccatgcataattcaccaattgag 236  Q
    ||| |||||||||||||||||||||    
T  820057 aacaatgcataattcaccaattgag 820033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 15272588 - 15272431
Alignment:
Q  87 caaccacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattga 184  Q
    |||| |||||| ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||  |  | || ||| ||||||||||||| | |||||    
T  15272588 caacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacatctattga 15272489  T
Q  185 tcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15272488 tcatggaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 15272431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 128 - 236
Target Start/End: Complemental strand, 8872699 - 8872588
Alignment:
Q  128 aacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaacca---ttgatcatgaaacatatcacaattcatcaacaaccatgcataat 224  Q
    |||||||||||||| ||||||||||  | |||||||||||||||||||||| |   |||||||||||||||||||||||||||||||||| | |||||||    
T  8872699 aacccaagccatgagttatcatcaacaacatgactaaacaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaacgcataat 8872600  T
Q  225 tcaccaattgag 236  Q
    ||||||||||||    
T  8872599 tcaccaattgag 8872588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 16522748 - 16522851
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcattt-ctcaacaacaatcatgaatcatgcaaacccaag 135  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||   ||| | |||||||    
T  16522748 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaag 16522847  T
Q  136 ccat 139  Q
    ||||    
T  16522848 ccat 16522851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 12837466 - 12837317
Alignment:
Q  87 caaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| |||||| |||||||| |||||| |||||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| |||||||     
T  12837466 caacaacaacttatttctca-caacaaatcatgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaacaacatccattgac 12837368  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||| |||||||||| | |||||||   |||||||||||||||||||    
T  12837367 catgaaacttatcacaatttaacaacaacatagcataattcaccaattgag 12837317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 30232763 - 30232613
Alignment:
Q  87 caaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| |||||| ||||| ||||||||| | |||||| ||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| ||||||||    
T  30232763 caacaacaacttatttcacaacaacaaattatgaataatgcatacccaagccatgaattaacatccataacatcacttaacaacaacaacatccattgat 30232664  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||| |||||||||| | |||||||   |||||||||||||||||||    
T  30232663 catgaaacttatcacaatttaacaacaacatagcataattcaccaattgag 30232613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 214
Target Start/End: Complemental strand, 18494602 - 18494467
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| ||| |||||||||||||||||| |||||||||||||| ||||||||||||| ||| ||||||  | || ||| |||||||||| ||||    
T  18494602 aaaccaccaacaacatctcatttctcaacaacaagtcatgaatcatgcatacccaagccatgagttaccatcaacaacatcacttaacaacaacagcaac 18494503  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaac 214  Q
     |||||||||||| | || ||||||||| |||||||    
T  18494502 aattgatcatgaatcttaacacaattcaacaacaac 18494467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 235
Target Start/End: Complemental strand, 45459096 - 45458973
Alignment:
Q  112 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaac 211  Q
    ||||||||||||||||||||||||||||| |||||| ||||  | |||||  | ||||||||||| | |||| ||||||||| |||||||||||| ||||    
T  45459096 aatcatgaatcatgcaaacccaagccatggattatcttcaacaacatgacatatcaacaacaacatcaattggtcatgaaacttatcacaattcaacaac 45458997  T
Q  212 aaccatgcataattcaccaattga 235  Q
    | | | ||||||||||||||||||    
T  45458996 agcaaagcataattcaccaattga 45458973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 96 - 227
Target Start/End: Complemental strand, 13809768 - 13809636
Alignment:
Q  96 ctcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 194  Q
    |||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||  | || | | | ||||||||||| | |||||||||||| |     
T  13809768 ctcatttctcaacaaccaatcatgaatcatgcatatccaagccatgaattatcatcaacaacatcaattagcaacaacaacatcaattgatcatgaatct 13809669  T
Q  195 tatcacaattcatcaacaaccatgcataattca 227  Q
    |||||||||||| |||||||   ||||||||||    
T  13809668 tatcacaattcaacaacaacatagcataattca 13809636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 9295624 - 9295727
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcattt-ctcaacaacaatcatgaatcatgcaaacccaag 135  Q
    |||||||||||||||||||||||| |||||||| ||||||||| ||||| |||| ||||||||||| |||||||||||||||||   ||| | |||||||    
T  9295624 acatcatcaaaatcaaacttcttctttatcaactcattttacataaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaag 9295723  T
Q  136 ccat 139  Q
    ||||    
T  9295724 ccat 9295727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 96 - 213
Target Start/End: Original strand, 27960961 - 27961078
Alignment:
Q  96 ctcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 194  Q
    ||||||||||||||| || |||| ||||||||| |||||| |||||||||||||||||  | || ||| ||||||||||||| | |||||||||||| |     
T  27960961 ctcatttctcaacaataaatcat-aatcatgcatacccaaaccatgaattatcatcaacaacatcacttaacaacaacaacatcaattgatcatgaatct 27961059  T
Q  195 tatcacaattcatcaacaa 213  Q
    ||| |||||||| ||||||    
T  27961060 tataacaattcaacaacaa 27961078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 214
Target Start/End: Complemental strand, 7186159 - 7185983
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaa 134  Q
    |||||||||||||||||||||||||||||||||||||||| |||||   | |||| ||||||||| ||||| || | |||||||| | ||  | ||||||    
T  7186159 acatcatcaaaatcaaacttcttcattatcaacccattttcacaaa---aacaacaacaactcatatctcatcatcaaatcatgatttataaacacccaa 7186063  T
Q  135 gccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaac 214  Q
    ||||||||| |||| |||  ||||  || | ||||||||||| | ||| | |||||| |  ||||||||||| |||||||    
T  7186062 gccatgaatcatcaacaataatatctcttagcaacaacaacatcaattaaacatgaatctcatcacaattcaacaacaac 7185983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 233
Target Start/End: Complemental strand, 52265749 - 52265628
Alignment:
Q  112 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaac 211  Q
    |||||||||| ||| | ||||||||||||||| |||| ||   |||| ||| | ||||||||||| | ||||| |||||| | |||||||||||| ||||    
T  52265749 aatcatgaattatgaacacccaagccatgaatcatcaacatcaatatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaac 52265650  T
Q  212 aaccatgcataattcaccaatt 233  Q
    |||  ||||||||||| |||||    
T  52265649 aacattgcataattcaacaatt 52265628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 148
Target Start/End: Complemental strand, 37957314 - 37957230
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatca 148  Q
    |||||||||||||||||  || |||| ||||||||||| ||| |||| |||||||||| ||||| ||||||||| ||||||||||    
T  37957314 tcaacccattttacaaagtcaccaacaacaactcatttatcatcaacaaatcatgaattatgcacacccaagccgtgaattatca 37957230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 233
Target Start/End: Original strand, 15044784 - 15044955
Alignment:
Q  64 atcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgac 161  Q
    ||||||||||||| || ||| || |||| |||| | |||||||| || ||| |||||| | ||| | ||||||||||||||| ||||||||  | || ||    
T  15044784 atcaacccattttcaccaaagcaacaacaacaatttatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcatcaacaacatcac 15044883  T
Q  162 taaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    | | ||||||||||| | ||||| |||||| | |||||||||||| |||||||   |||||||||| |||||    
T  15044884 ttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataattcatcaatt 15044955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 174
Target Start/End: Complemental strand, 7965000 - 7964890
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 163  Q
    ||||||||||||||||||||| |||| ||||||||||||||| || | |||||||| | ||| | || |||||||||||| |||| |||  |||| |||     
T  7965000 tcaacccattttacaaaaccaacaacaacaactcatttctcatcatcaaatcatgatttatgaacactcaagccatgaatcatcaacaacaatatcactt 7964901  T
Q  164 aacaacaacaa 174  Q
    | |||||||||    
T  7964900 agcaacaacaa 7964890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 242
Target Start/End: Complemental strand, 15109640 - 15109459
Alignment:
Q  64 atcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgac 161  Q
    ||||||||||||| || ||| || |||| |||| | |||||||| || ||| |||||| | ||| | ||||||||||||||| ||||||||  | || ||    
T  15109640 atcaacccattttcaccaaagcaacaacaacaatttatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcatcaacaacattac 15109541  T
Q  162 taaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaa-ttgagtataat 242  Q
    | | ||||||||||| | ||||| |||||| | |||||||||||| |||||||   |||||||| | ||| |||||||||||    
T  15109540 ttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataatttatcaatttgagtataat 15109459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 213
Target Start/End: Original strand, 18276392 - 18276541
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 163  Q
    ||||||||||||||||||||| |||| |||||||| | |||| |  | |||||||| | ||| | ||||||||||| ||| |||| |||  |||| |||     
T  18276392 tcaacccattttacaaaaccaacaacaacaactcaatactcatcgtcaaatcatgatttatgaacacccaagccatcaatcatcaacaacaatatcactt 18276491  T
Q  164 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaa 213  Q
      ||||||||||| | ||||| |||||| |  ||||||||||| ||||||    
T  18276492 tgcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaa 18276541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 148
Target Start/End: Complemental strand, 47535328 - 47535251
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatca 148  Q
    |||||||||||||| |||| |||||||||||||||  ||| |||||||||| ||| | || |||||||||||| ||||    
T  47535328 attttacaaaaccatcaacaacaactcatttctcattaacaaatcatgaattatgaacactcaagccatgaatcatca 47535251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 148
Target Start/End: Complemental strand, 19822065 - 19821981
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatca 148  Q
    ||||| |||||||||||  || |||  ||||||||||||||| |||||| |||||||| ||| | ||||||||||||||| ||||    
T  19822065 tcaactcattttacaaagtcaccaaaaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatca 19821981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 233
Target Start/End: Complemental strand, 41256660 - 41256489
Alignment:
Q  64 atcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgac 161  Q
    ||||||||||||| | ||||||| |||| ||||||||||||||| || | |||||||| | ||| | |||||| |||||||| |||| |||  ||||  |    
T  41256660 atcaacccatttttataaaaccaacaacaacaactcatttctcatcatcaaatcatgatttatgaacacccaaaccatgaatcatcaacaacaatatctc 41256561  T
Q  162 taaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    | ||||||||||||| | ||| | ||||   |  ||||||||||| ||||||||  ||| |||||| |||||    
T  41256560 ttaacaacaacaacatcaattaaacatggttctcatcacaattcaacaacaacctagcacaattcaacaatt 41256489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 236
Target Start/End: Complemental strand, 10104452 - 10104382
Alignment:
Q  166 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||||||| | ||||| |||||| |||||| ||||||| |||||||   ||| |||||||||||||||    
T  10104452 caacaacaacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgag 10104382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 14901197 - 14901274
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatca 148  Q
    |||||||||||||| |||| ||||| ||||||||| || ||| |||||||| ||||| ||||| | ||||||| ||||    
T  14901197 attttacaaaaccaccaacaacaacccatttctcatcatcaattcatgaattatgcacacccatgtcatgaatcatca 14901274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 15675293 - 15675221
Alignment:
Q  164 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||| |||| | ||||| |||||| |||||| ||||||| |||||||   ||| |||||||||||||||    
T  15675293 aacaacaataacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgag 15675221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 113; Significance: 3e-57; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 79844 - 80000
Alignment:
Q  87 caaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| |||||| ||||| ||||||||| | |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  79844 caacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaacaacaacaacaaccattaat 79943  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  79944 catgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcataat 80000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 236
Target Start/End: Original strand, 46171 - 46295
Alignment:
Q  112 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaac 211  Q
    |||||||||| ||| | ||||||||||||||| |||| |||  |||| ||| |  |||||||||| |||||||||||||||| |||||||||| | ||||    
T  46171 aatcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagaaacaacaacatccattgatcatgaaacttatcacaatttaacaac 46270  T
Q  212 aaccatgcataattcaccaattgag 236  Q
    |||   |||||||||||||||||||    
T  46271 aacatagcataattcaccaattgag 46295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 236
Target Start/End: Original strand, 40664 - 40788
Alignment:
Q  112 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaac 211  Q
    |||||||||| ||| | ||||||||||||||| |||| |||  |||| ||| | ||||||||||| |||||||||||||||| |||||||||  | ||||    
T  40664 aatcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatccattgatcatgaaacttatcacaatgtaacaac 40763  T
Q  212 aaccatgcataattcaccaattgag 236  Q
    ||    |||||||||||||||||||    
T  40764 aatatagcataattcaccaattgag 40788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 1e-56; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 80 - 242
Target Start/End: Original strand, 21859984 - 21860147
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| |||| ||||||||||||||||| | ||||||||||||||||| ||||||| || ||||||||  ||||||||||||||||||||||||    
T  21859984 aaaccaacaacaacaattcatttctcaacaacaaattatgaatcatgcaaacccgagccatgtatcatcatcaacaatatgactaaacaacaacaacaac 21860083  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21860084 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 21860147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 59 - 242
Target Start/End: Original strand, 22366970 - 22367154
Alignment:
Q  59 tcattatcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 156  Q
    |||| ||||||||||||| || ||| || |||| ||||  |||||||||||||||| |||||||||||||||||||||| |||| || ||||||||  ||    
T  22366970 tcataatcaacccattttcaccaaaacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagtcatgtatcatcatcaacaat 22367069  T
Q  157 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  22367070 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcat-attcaccaattgagcataat 22367154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 59 - 242
Target Start/End: Complemental strand, 15861728 - 15861545
Alignment:
Q  59 tcattatcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 156  Q
    |||| ||||||||||||| || ||| || |||| ||||  |||||||||||||||| |||||||||||||||||||||| |||| || ||||||||  ||    
T  15861728 tcataatcaacccattttcaccaaaacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagtcatgcatcatcatcaacaat 15861629  T
Q  157 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15861628 atgactaaacaa--acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 15861545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 77 - 242
Target Start/End: Complemental strand, 44035255 - 44035090
Alignment:
Q  77 acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaac 175  Q
    ||||||||| |||| ||||  |||||||||||||||| | ||||||||||||||| |||||||| | | ||||||||  |||||||||||||||||||||    
T  44035255 acaaaaccaccaacaacaatccatttctcaacaacaaattatgaatcatgcaaactcaagccatta-tcatcatcaactatatgactaaacaacaacaac 44035157  T
Q  176 aaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  44035156 aaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaaatgagcataat 44035090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 49967631 - 49967780
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 186  Q
    |||| ||| |||||| ||||||||||| ||||||||||||||||| |||| |||||||||||||||  | |||||| ||||||||||||| | |||||||    
T  49967631 caacaacatctcattcctcaacaacaaccatgaatcatgcaaaccgaagcaatgaattatcatcaacaacatgacttaacaacaacaacatcaattgatc 49967730  T
Q  187 atgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  49967731 atgaaacgtatcacaattcatcaacaacaatgtataattcaccaattgag 49967780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 35522585 - 35522436
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 186  Q
    |||| ||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  | |||||  | ||||||||||| | |||||||    
T  35522585 caacaacatctcatttctcaacacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacgtatcaacaacaacatcaattgatc 35522486  T
Q  187 atgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||| |||||||||||| ||||||| | |||||||||||||||||||    
T  35522485 atgaaacttatcacaattcaacaacaacaaagcataattcaccaattgag 35522436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 41212049 - 41212202
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaaca---acaacaacaaccatt 182  Q
    |||| ||| |||||||||||||||||| | | |||| ||||||||||||||||||||||||||||||  | |||||||||||   ||||||||||| |||    
T  41212049 caacaacatctcatttctcaacaacaaaccaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaacaatt 41212148  T
Q  183 gatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||||||||||||||||||||||||||||  |||||||||||| |||||||    
T  41212149 gatcatgaaacatatcacaattcatcaacaacagtgcataattcactaattgag 41212202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 21718209 - 21718358
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 186  Q
    |||| ||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||  | |||||  | ||||||||||| | |||||||    
T  21718209 caacaacatctcatttctcaagaacaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatc 21718308  T
Q  187 atgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||| |||||||| |||||||||||   |||||||||||||||||||    
T  21718309 atgaaacttatcacaaatcatcaacaacatagcataattcaccaattgag 21718358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 22403350 - 22403227
Alignment:
Q  112 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaac 211  Q
    |||||||||||||| ||||||||||||||||||||||||||  | |||||| |||||||||||||||  || |||||||||| |||||||||||||||||    
T  22403350 aatcatgaatcatg-aaacccaagccatgaattatcatcaacaacatgacttaacaacaacaacaacagttaatcatgaaacttatcacaattcatcaac 22403252  T
Q  212 aaccatgcataattcaccaattgag 236  Q
    ||| |||||||||||||||||||||    
T  22403251 aacaatgcataattcaccaattgag 22403227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 68 - 236
Target Start/End: Original strand, 35054716 - 35054886
Alignment:
Q  68 acccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 165  Q
    ||||||||| || |||||| |||| |||||| ||| | ||||||||| | |||||||||||| ||||||||||||||||| |||| |  | || ||| ||    
T  35054716 acccattttcaccaaaccaacaacaacaacttattccacaacaacaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaa 35054815  T
Q  166 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||||||| |||||||||||||||| ||||||| ||||||||| ||   |||||||||||||||||||    
T  35054816 caacaacaacatccattgatcatgaaacttatcacagttcatcaactacatagcataattcaccaattgag 35054886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 80 - 236
Target Start/End: Complemental strand, 27330026 - 27329872
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaacc 179  Q
    |||||| |||| |||||| ||||  ||||||  || |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| ||    
T  27330026 aaaccaacaacaacaacttatttgacaacaa--attatgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaacaacatcc 27329929  T
Q  180 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||||||||| |||||||||| | |||||||   |||||||||||||||||||    
T  27329928 attgatcatgaaacttatcacaatttaacaacaacatagcataattcaccaattgag 27329872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 73 - 212
Target Start/End: Complemental strand, 51627945 - 51627805
Alignment:
Q  73 ttttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat-atgactaaacaaca 170  Q
    |||||| |||||| |||| ||| |||||||||||||| ||| |||||||||||||| |||||||||||||||||||||| ||||| || ||| | |||||    
T  51627945 ttttaccaaaccaccaacaacatctcatttctcaacagcaaatcatgaatcatgcatacccaagccatgaattatcatc-aacatcatcacttagcaaca 51627847  T
Q  171 acaacaaccattgatcatgaaacatatcacaattcatcaaca 212  Q
    |||||| | |||||||||||| | |||||||||||| |||||    
T  51627846 acaacatcaattgatcatgaatcttatcacaattcaacaaca 51627805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 65 - 148
Target Start/End: Original strand, 27674755 - 27674838
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatca 148  Q
    |||||||||||||||||  || |||| ||||||||||||||| ||| |||||||||| ||||| ||||||||||||||||||||    
T  27674755 tcaacccattttacaaagtcaccaacaacaactcatttctcatcaaaaatcatgaattatgcacacccaagccatgaattatca 27674838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 9784341 - 9784239
Alignment:
Q  112 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaac 211  Q
    ||||||||||||||||| |||||||||||||| ||||||||  | |||||  | ||||||||||| | ||||||| |||||| |||||||||||| ||||    
T  9784341 aatcatgaatcatgcaagcccaagccatgaatgatcatcaacaacatgacatatcaacaacaacatcaattgatcttgaaacttatcacaattcaacaac 9784242  T
Q  212 aac 214  Q
    |||    
T  9784241 aac 9784239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 148
Target Start/End: Complemental strand, 22829712 - 22829629
Alignment:
Q  66 caacccattttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatca 148  Q
    ||||||||||||||||  || |||| ||||||||||||||| |||||| |||||||| ||||| ||||||||||||||||||||    
T  22829712 caacccattttacaaagtcaccaacaacaactcatttctcatcaacaaatcatgaattatgcacacccaagccatgaattatca 22829629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 65 - 214
Target Start/End: Original strand, 17608886 - 17609036
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 163  Q
    |||||||||||| |||||||| |||| |||||||| ||||||  | ||| |||||| | ||| | ||||||||||||||| |||| |||  |||| |||     
T  17608886 tcaacccattttccaaaaccaacaacaacaactcaattctcataatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcactt 17608985  T
Q  164 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaac 214  Q
    ||||||||||||||| ||||| |||||| |  |||| |||||| |||||||    
T  17608986 aacaacaacaacaacaattgaacatgaatctcatcataattcaacaacaac 17609036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 148
Target Start/End: Original strand, 19603055 - 19603139
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatca 148  Q
    |||||||||||||||||  || |||| ||||||||||||||| |||| |||||||||| || || ||||||| ||||||||||||    
T  19603055 tcaacccattttacaaagtcaccaacaacaactcatttctcatcaacaaatcatgaattattcacacccaagtcatgaattatca 19603139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 145
Target Start/End: Complemental strand, 38033962 - 38033882
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaatta 145  Q
    |||||||||||||||||  || |||| |||||| |||||||| |||||||| ||||  ||||| |||||||||||||||||    
T  38033962 tcaacccattttacaaagtcaccaacaacaacttatttctcatcaacaatcgtgaactatgcacacccaagccatgaatta 38033882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 233
Target Start/End: Original strand, 20177140 - 20177302
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||| ||||||||| |||| ||||||||||||||  |||| |||||||||| ||| | | ||||||||||||| ||||||||  | || ||| | |||||    
T  20177140 atttcacaaaaccaccaacaacaactcatttctcttcaacaaatcatgaattatgaatatccaagccatgaatcatcatcaacaacatcacttagcaaca 20177239  T
Q  171 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    |||||| | ||||| | |||    || ||||||||| |||||||   |||||||||| |||||    
T  20177240 acaacatcaattgaacttgacttttaccacaattcaacaacaacatagcataattcaacaatt 20177302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 233
Target Start/End: Complemental strand, 9784248 - 9784184
Alignment:
Q  166 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    ||||||||||| | |||||||||||||| |||||||||   |||||||| | ||||||||||||||||    
T  9784248 caacaacaacatcaattgatcatgaaacttatcacaat---tcaacaacaaagcataattcaccaatt 9784184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 21194980 - 21195141
Alignment:
Q  73 ttttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 171  Q
    ||||| ||||||| |||| ||||||||||||||| || | |||||||| | ||| | ||||||||||||||| |||| |||  ||||  || ||||||||    
T  21194980 ttttataaaaccaacaacaacaactcatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatctcttaacaacaa 21195079  T
Q  172 caacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    |||||   ||| | |||||  |  ||||||||||| ||||||||  ||| |||||| |||||    
T  21195080 caacattaattaaacatgattctcatcacaattcaacaacaacctagcacaattcaacaatt 21195141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 227
Target Start/End: Complemental strand, 37234149 - 37233986
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 163  Q
    ||||||||||||||||||||| | || | |||||| || ||| || ||| |||||| | ||| | ||||||| ||||||| |||| |||  |||| |||     
T  37234149 tcaacccattttacaaaaccaaccacaaaaactcaattttcatcatcaaatcatgatttatggacacccaagtcatgaatcatcaacaacaatatcactt 37234050  T
Q  164 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattca 227  Q
    | ||||||||||| | ||||| |||||| |  ||||||||||| | |||||   ||||||||||    
T  37234049 agcaacaacaacatcaattgaacatgaatctcatcacaattcaaccacaacatagcataattca 37233986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 72 - 217
Target Start/End: Original strand, 30056 - 30202
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||| ||||||||| |||| ||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  30056 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaatatgactaaacaaca 30155  T
Q  171 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccat 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  30156 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccat 30202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 109; Significance: 7e-55; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 72 - 242
Target Start/End: Complemental strand, 162469 - 162297
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaa-c 169  Q
    |||| ||||||||| |||| ||||  |||||||||||||||| ||||||||||||||||||||||||||  || ||||||||  |||||||||||||| |    
T  162469 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatatatcatcatcaacaatatgactaaacaaac 162370  T
Q  170 aacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  162369 aacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcagaattcaccaattgagcataat 162297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 96 - 236
Target Start/End: Original strand, 164204 - 164345
Alignment:
Q  96 ctcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 194  Q
    |||||||||||||||||| | | |||| ||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||  ||||||||||||||    
T  164204 ctcatttctcaacaacaaaccaagaattatgcaaacccaagccatgaattaccatcaacaacatgactaaacaacaacaacaacatttgatcatgaaaca 164303  T
Q  195 tatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  164304 tatcacaattcatcaacaacaatgcataattcaccaattgag 164345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 242
Target Start/End: Complemental strand, 166547 - 166383
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||| ||||||||| |||| ||||  ||||| |||||||||| ||||||||||||||||||||||||||| || ||||||||  |||| |       |||    
T  166547 atttcacaaaaccaccaacaacaatccatttttcaacaacaaatcatgaatcatgcaaacccaagccatgtatcatcatcaacaatatta-------aca 166455  T
Q  171 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  166454 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcagaattcaccaattgagcataat 166383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 176
Target Start/End: Complemental strand, 116795 - 116690
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||||||||||||| |||| ||||  ||||| ||| |||||| |||||||| ||| | ||||||||||||||| |||| |||  |||| ||| | |||||    
T  116795 attttacaaaaccaccaacaacaatccatttttcatcaacaaatcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaaca 116696  T
Q  171 acaaca 176  Q
    ||||||    
T  116695 acaaca 116690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 6e-52; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 72 - 242
Target Start/End: Original strand, 22274688 - 22274858
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||| ||||||||| |||| ||||  ||||||||||||||||| |||||||||||||| ||||||||||  || ||||||||  ||||||||||||| ||    
T  22274688 atttcacaaaaccaccaacaacaatccatttctcaacaacaattcatgaatcatgcaa-cccaagccatctatcatcatcaacaatatgactaaacatca 22274786  T
Q  171 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  22274787 acaacaaccattgatcatgaaacacatcacaattcatcaacaaccatgcataattcaccaattgagcataat 22274858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 23836972 - 23836822
Alignment:
Q  87 caaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||| ||| |||| ||||||||||||| ||||||||||||||||  | |||||||||||||||||||||| ||||||    
T  23836972 caacaacatctcatttctcaacaacaaatcaagaattatgcaaacccaagtcatgaattatcatcaacaaaatgactaaacaacaacaacaacaattgat 23836873  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23836872 catgaaacatatcacaattcatcaacaacaatgcataattcaccaattgag 23836822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 32465838 - 32465988
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||| | ||||||    
T  32465838 caacaacatctcatttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacatcaattgat 32465937  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||| |||||||||||||||| ||| |||||||||||||||||||||    
T  32465938 catgaaacttatcacaattcatcaagaacaatgcataattcaccaattgag 32465988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 72 - 242
Target Start/End: Original strand, 22283921 - 22284091
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||| ||||||||| |||| |||| ||||||||||||| |||| |||||||||||||| ||||||||||| || ||||||||  ||| ||||||||| ||    
T  22283921 atttcacaaaaccaccaacaacaattcatttctcaacagcaattcatgaatcatgcaa-cccaagccatgtatcatcatcaacaataagactaaacatca 22284019  T
Q  171 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    | |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  22284020 aaaacaacgattgatcatgaaacacatcacaattcatcaacaaccatgcataattcaccaattgagcataat 22284091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 68 - 236
Target Start/End: Complemental strand, 25876206 - 25876036
Alignment:
Q  68 acccatttt-acaaaaccagcaaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 165  Q
    ||||||||| || |||||| |||| |||||| ||||| ||| ||||| | | |||| ||||||||||||||||||||||||||||||  | |||||||||    
T  25876206 acccattttcaccaaaccaacaacaacaacttatttcacaataacaagccaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaa 25876107  T
Q  166 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||| |||||||||  ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  25876106 caataacaacaacatttgatcatgaagcatatcacaattcatcaacaacaatgcataattcaccaattgag 25876036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 80 - 242
Target Start/End: Complemental strand, 9653179 - 9653015
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa 177  Q
    |||||| |||| |||||| ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||| |||||     
T  9653179 aaaccaacaacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacatcaacat 9653080  T
Q  178 ccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    | ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9653079 ctattgatcatgaaaaatatcgcaattcatcaacaaccatgcataattcaccaattgagtataat 9653015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 37 - 190
Target Start/End: Complemental strand, 19433649 - 19433495
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaag 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||| |||||||||| ||| | |||||||    
T  19433649 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaacacccaag 19433550  T
Q  136 ccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatga 190  Q
    |||||||| |||| |||  ||||  || | ||||||||||| | ||||| |||||    
T  19433549 ccatgaatcatcaacaacaatatctcttagcaacaacaacatcaattgaacatga 19433495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 21274320 - 21274168
Alignment:
Q  91 cacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcat 188  Q
    ||||||| ||||| |||||||||  | ||||||||||| | |||||||||||||||| |||| |  | || ||| ||||||||||||| | |||||||||    
T  21274320 cacaacttatttcacaacaacaaaattatgaatcatgcta-cccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcat 21274222  T
Q  189 gaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21274221 gaaacatattacaattcatcaacaaccatgcataattcaccaattgagtataat 21274168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 240
Target Start/End: Original strand, 6879417 - 6879571
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||| ||||||||||||| | | |||| ||  ||||||||| |||| |||||||||||  | ||||||||| |||||||||||| ||||||    
T  6879417 caacaacatctcaattctcaacaacaaaccaagaattatttaaacccaagacatgtattatcatcaacaacatgactaaataacaacaacaacaattgat 6879516  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtata 240  Q
    ||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  6879517 cattaaacatatcacaattcatcaataacaatgcataattcaccaattgagtata 6879571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 28974029 - 28974179
Alignment:
Q  87 caaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||  | |||||| | ||||||||||| | ||||||    
T  28974029 caacaacatctcatttctcatcaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaacaacaacatcaattgat 28974128  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||| || |||||||||||||||||   ||||||||| |||| ||||    
T  28974129 catgaaacttaccacaattcatcaacaacatagcataattcgccaaatgag 28974179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 271151 - 271300
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 186  Q
    |||| ||| |||||| |||||||  ||||||||||||||||||||||||| |||||||||||||||  | |||||  | ||||||||||| | |||||||    
T  271151 caacaacatctcattcctcaacacaaatcatgaatcatgcaaacccaagctatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatc 271250  T
Q  187 atgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||| |||||||||||| ||||||| |  ||||||||||||||||||    
T  271251 atgaaacttatcacaattcaacaacaacaaaacataattcaccaattgag 271300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 235
Target Start/End: Complemental strand, 4448399 - 4448251
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 186  Q
    |||| ||| ||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||  | |||||  | ||||||||||| | |||||||    
T  4448399 caacaacatctcatttttcaacacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatc 4448300  T
Q  187 atgaaacatatcacaattcatcaacaaccatgcataattcaccaattga 235  Q
    ||||||| ||||| |||||| ||||||| | |||| |||||||||||||    
T  4448299 atgaaacttatcataattcaacaacaacaaagcatcattcaccaattga 4448251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 68 - 233
Target Start/End: Complemental strand, 36890972 - 36890805
Alignment:
Q  68 acccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 165  Q
    ||||||||| || |||||| |||| |||||| ||||||||||||||| ||| |||||||||| ||||||||||||||| |||||| |  | || ||| |     
T  36890972 acccattttcaccaaaccaacaacaacaacttatttctcaacaacaaatcaagaatcatgcatacccaagccatgaataatcatccacaacatcacttag 36890873  T
Q  166 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    ||||||||||||| |||||||||||||| |||||||||| |||||||||   ||||||||||||||||    
T  36890872 caacaacaacaacaattgatcatgaaacttatcacaatttatcaacaacatagcataattcaccaatt 36890805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 236
Target Start/End: Original strand, 25601989 - 25602154
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||| ||||||||| |||| ||||  |||||||||||||||| |||||||||||||||||| ||||||||| ||||||| ||  | |||||  | |||||    
T  25601989 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacctaagccatgatttatcataaacaacatgacatagcaaca 25602088  T
Q  171 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||| | |||||||||||||| ||||||||||||||||| ||   |||||| ||||||||||||    
T  25602089 acaacatcaattgatcatgaaacttatcacaattcatcaaccacatagcataactcaccaattgag 25602154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 199
Target Start/End: Original strand, 27261786 - 27261899
Alignment:
Q  87 caaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||  | |||||| | ||||||||| | | ||||||    
T  27261786 caacaacatctcatttcttaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaacaacaatatcaattgat 27261885  T
Q  186 catgaaacatatca 199  Q
    |||||||| |||||    
T  27261886 catgaaacttatca 27261899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 24827044 - 24826961
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactca-tttctcaacaacaatcatga 119  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| |||| ||| |||| ||||||||||||||||||||    
T  24827044 acatcatcaatatcaaacttcttctttatcaacccattttacaaaaccaccaacaacagctcattttctcaacaacaatcatga 24826961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 213
Target Start/End: Complemental strand, 22580140 - 22579999
Alignment:
Q  73 ttttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 171  Q
    |||||| ||| || |||| ||| |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||  | || ||  | || ||     
T  22580140 ttttaccaaaacaccaacaacatctcatttctccacaacaaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacatatcagcag 22580041  T
Q  172 caacaaccattgatcatgaaacatatcacaattcatcaacaa 213  Q
    ||||| | |||||||||||||| |||||||||||| ||||||    
T  22580040 caacatcaattgatcatgaaacttatcacaattcaacaacaa 22579999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 25212977 - 25213081
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcattt--ctcaacaacaatcatgaatcatgcaaacccaa 134  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||| || | |||||||||||  |||||||||||||||||   ||| | ||||||    
T  25212977 acatcatcaaaatcaaatttcttctttatcaacccattttacaaaaccaccaccaacaactcatttttctcaacaacaatcatgatatatgaacacccaa 25213076  T
Q  135 gccat 139  Q
    |||||    
T  25213077 gccat 25213081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 3529 - 3403
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaa 164  Q
    |||||||||||||||||  || |||| ||||||||||||||| | |||||||||||| ||| | ||||||||||||||| ||||||||  | || ||| |    
T  3529 tcaacccattttacaaagtcaccaacaacaactcatttctcatctacaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcactta 3430  T
Q  165 acaacaacaacaaccattgatcatgaa 191  Q
     ||||||||||| | ||||| ||||||    
T  3429 gcaacaacaacatcaattgaacatgaa 3403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 236
Target Start/End: Complemental strand, 24571572 - 24571408
Alignment:
Q  73 ttttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 171  Q
    |||||| |||||| |||| ||| |||||||||||||||||| ||||||||||| || | |||||| |||| ||||||||||  | || ||| ||||||||    
T  24571572 ttttaccaaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatacatagccaagc-atgagttatcatcaacaacatcacttaacaacaa 24571474  T
Q  172 caacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgag 236  Q
    ||||| | |||||||||||| | || ||||||||| ||| |||   ||||||||| ||||||||||    
T  24571473 caacatcaattgatcatgaatcttaacacaattcaacaaaaacatagcataattcaaccaattgag 24571408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 233
Target Start/End: Original strand, 43645824 - 43646020
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 136  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||| || | ||||||||  |  || ||  |||||||||| ||| | |||||||     
T  43645824 acatcatcaaaatcaaactttttcattaccaacccattttacaaaaccaccaccaacaactcaaatgacatcacaaatcatgaattatgaacacccaagt 43645923  T
Q  137 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    ||||||| |||  |||  | || ||| | ||||||||||| | ||||| |||||  | || |||| |||| |||||||   |||||||||| |||||    
T  43645924 catgaatcatcgacaacaacatcacttagcaacaacaacatcaattgaacatgattcttaccacagttcaacaacaacatagcataattcaacaatt 43646020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 233
Target Start/End: Original strand, 67952 - 68119
Alignment:
Q  68 acccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 165  Q
    ||||||||| ||||||||| |||| |||||| |||||||| || ||| |||||||| ||| | || |||||||||||| | || |||  |||| ||| |     
T  67952 acccattttcacaaaaccaacaacaacaacttatttctcatcatcaaatcatgaattatgaacacgcaagccatgaatcaccaacaacaatatcacttag 68051  T
Q  166 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    ||||||||||| | ||||| |||||| | || ||||||||| |||||||   |||||||||| |||||    
T  68052 caacaacaacatcaattgaacatgaatcttaccacaattcaacaacaacatagcataattcaacaatt 68119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 148
Target Start/End: Original strand, 722353 - 722437
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatca 148  Q
    |||||| ||||||||||  || |||| ||||||||| ||||| ||| || |||||||| ||||| ||||||||||||||||||||    
T  722353 tcaaccaattttacaaagtcaccaacaacaactcatatctcatcaataaatcatgaattatgcacacccaagccatgaattatca 722437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 24884643 - 24884684
Alignment:
Q  64 atcaacccattttacaaaaccagcaaccacaactcatttctc 105  Q
    |||||||||||||||||||||| |||| ||||||||||||||    
T  24884643 atcaacccattttacaaaaccaacaacaacaactcatttctc 24884684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 191
Target Start/End: Complemental strand, 23821892 - 23821767
Alignment:
Q  68 acccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 165  Q
    ||||||||| ||||||||| |||| |||||| ||||| || || ||| |||||||| ||| | ||||| ||||||||| |||| |||  |||| ||| |     
T  23821892 acccattttcacaaaaccaacaacaacaacttatttcacatcatcaaatcatgaattatgaacacccatgccatgaatcatcaacaacaatatcacttag 23821793  T
Q  166 caacaacaacaaccattgatcatgaa 191  Q
    ||||||||||| | ||||| ||||||    
T  23821792 caacaacaacatcaattgaacatgaa 23821767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 191
Target Start/End: Complemental strand, 23830971 - 23830846
Alignment:
Q  68 acccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 165  Q
    ||||||||| ||||||||| |||| |||||| ||||| || || ||| |||||||| ||| | ||||| ||||||||| |||| |||  |||| ||| |     
T  23830971 acccattttcacaaaaccaacaacaacaacttatttcacatcatcaaatcatgaattatgaacacccatgccatgaatcatcaacaacaatatcacttag 23830872  T
Q  166 caacaacaacaaccattgatcatgaa 191  Q
    ||||||||||| | ||||| ||||||    
T  23830871 caacaacaacatcaattgaacatgaa 23830846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 24341593 - 24341521
Alignment:
Q  164 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||| |||| | ||||| |||||| |||||| ||||||| |||||||   ||| |||||||||||||||    
T  24341593 aacaacaataacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgag 24341521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 77 - 242
Target Start/End: Complemental strand, 736 - 570
Alignment:
Q  77 acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaac 175  Q
    ||||||||| |||| | ||  |||||||||||||||| | || |||||||||||||||||||||| || ||||||||  |||||| |||| | |||||||    
T  736 acaaaaccaccaacaataatccatttctcaacaacaaattattaatcatgcaaacccaagccatgtatcatcatcaacaatatgagtaaatatcaacaac 637  T
Q  176 aaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  636 aaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 97; Significance: 1e-47; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 97 - 236
Target Start/End: Complemental strand, 132507 - 132367
Alignment:
Q  97 tcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacat 195  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||| | |||||||||||||| |    
T  132507 tcatttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaacaacatcaattgatcatgaaactt 132408  T
Q  196 atcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  132407 atcacaattcatcaacaacgatgcataattcaccaattgag 132367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 236
Target Start/End: Original strand, 11660 - 11818
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| ||| |||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||  |  | ||| | ||||||||||| |    
T  11660 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcataaccaagccatgaattatcatcaacaacgtcacttagcaacaacaacatc 11759  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgag 236  Q
     |||||||||||||| |||||||||||  |||||||   ||||||||| ||||||||||    
T  11760 aattgatcatgaaacttatcacaattctacaacaacatagcataattcaaccaattgag 11818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 88289 - 88404
Alignment:
Q  120 atcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgc 219  Q
    |||||||| |||||||||| |||||| |||| |  | || ||| ||||||| ||||| | |||||||||||||| ||||||||||||||||||||   ||    
T  88289 atcatgcatacccaagccaagaattagcatccataacatcacttaacaacagcaacatctattgatcatgaaacttatcacaattcatcaacaacatagc 88388  T
Q  220 ataattcaccaattga 235  Q
    ||||||||||||||||    
T  88389 ataattcaccaattga 88404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 32183 - 32333
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||| | | | || ||||||||||||||||||||||||||||||  | |||||||||||||||||||||| ||||||    
T  32183 caacaacatctcatttctcaacaacaaaccaaggattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgat 32282  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  32283 catgaaacatatcacaattcatcaacaacaattcataattcaccaattgag 32333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 42120 - 41970
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||| | | | || ||||||||||||||||||||||||||||||  | |||||||||||||||||||||| ||||||    
T  42120 caacaacatctcatttctcaacaacaaaccaaggattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgat 42021  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  42020 catgaaacatatcacaattcatcaacaacaattcataattcaccaattgag 41970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 70889 - 70739
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||| ||| ||||    
T  70889 caacaacatctcatttctcaacaacaaaccatgaatcatgcaaacccaagtcatgaattatcatcaacaacatgactaaacaacaacaacatccaatgat 70790  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||| |||||||||||||||||||  |||||||||||||||||||||    
T  70789 catgaaacttatcacaattcatcaacaataatgcataattcaccaattgag 70739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 87 - 240
Target Start/End: Original strand, 60787 - 60940
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 186  Q
    |||| ||| |||||||||| |||  |||||||||||||||||||||||| ||||||||||||||||  | |||||  | ||||||||||| | |||||||    
T  60787 caacaacatctcatttctccacacaaatcatgaatcatgcaaacccaagtcatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatc 60886  T
Q  187 atgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtata 240  Q
    ||||||| |||||||||||| ||||||| | |||||||||||||||| ||||||    
T  60887 atgaaacttatcacaattcaacaacaacaaagcataattcaccaattaagtata 60940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 91; Significance: 4e-44; HSPs: 2)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 5513 - 5363
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||  | |||||| | ||||||||||| | ||||||    
T  5513 caacaacatctcatttctcaacaacaaaccatgaatcatgcaaacccaaaccatgaattatcatcaacaacatgacttagcaacaacaacatcaattgat 5414  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  5413 catgaaacatatcacaattcatcaacaacaatgcctaattcaccaattgag 5363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 96 - 236
Target Start/End: Complemental strand, 9140 - 8998
Alignment:
Q  96 ctcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 194  Q
    |||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||  | || ||| | ||||||||||| | ||||||||||||||     
T  9140 ctcatttctcaacaacaaatcatgaatcatgcatacctaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattgatcatgaaact 9041  T
Q  195 tatcacaattcatcaacaaccatgcataattc-accaattgag 236  Q
    |||||||||| | |||||||   ||||||||| ||||||||||    
T  9040 tatcacaatttaacaacaacatagcataattcaaccaattgag 8998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 22671 - 22821
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||||| | ||||||    
T  22671 caacaacatctcatttctcaataacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacaaaacaacaacaacatcaattgat 22770  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||| |||||||||||||||||||  |||||||||||||||||||||    
T  22771 catgaaacttatcacaattcatcaacaaaaatgcataattcaccaattgag 22821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 80 - 242
Target Start/End: Complemental strand, 1261 - 1097
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa 177  Q
    |||||| |||| |||||| |||||||||||||||  | |||||||||||| ||||||||||||||||| |||  |  | || ||| |||||||||||||     
T  1261 aaaccaacaacaacaacttatttctcaacaacaaaattatgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacat 1162  T
Q  178 ccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1161 ctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 1097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 80 - 242
Target Start/End: Complemental strand, 13669 - 13505
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa 177  Q
    |||||| |||| |||||| ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||| |  | || ||| |||||||||||||     
T  13669 aaaccaacaacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 13570  T
Q  178 ccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13569 ctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 13505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 21636 - 21479
Alignment:
Q  87 caaccacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattga 184  Q
    |||| |||||| ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||  |  | || ||| ||||||||||||| | |||||    
T  21636 caacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacatctattga 21537  T
Q  185 tcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21536 tcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 21479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 80 - 242
Target Start/End: Original strand, 14921 - 15085
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa 177  Q
    |||||| |||| |||||| ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||| |  | || ||| |||||||||||||     
T  14921 aaaccaacaacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 15020  T
Q  178 ccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15021 ctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 15085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 96 - 236
Target Start/End: Complemental strand, 11965 - 11825
Alignment:
Q  96 ctcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacat 195  Q
    |||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||  | |||||| | ||||||||||| | |||||||||||||| |    
T  11965 ctcatttctcaacaccaatcatgaaccatgcaaactcaagccatgaattatcatcaacaacatgacttagcaacaacaacatcaattgatcatgaaactt 11866  T
Q  196 atcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  11865 atcaaaattcatcaacaacaatgcataattcaccaattgag 11825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 7115 - 6962
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaacca---tt 182  Q
    |||| ||| |||||||||||||||||| | | |||| ||||||||||||||||||||||||||||||  | |||||||||||||||||||||| |   ||    
T  7115 caacaacatctcatttctcaacaacaaaccaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaacaatt 7016  T
Q  183 gatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  7015 gatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgag 6962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 1089 - 939
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||  | |||||  | ||||||||||||| ||||||    
T  1089 caacaacatctcatttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacaacaattgat 990  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||| |||||||| ||||||| ||| |||||||||||||||||||||    
T  989 catgaaacttatcacaaatcatcaataacaatgcataattcaccaattgag 939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 80 - 242
Target Start/End: Complemental strand, 17686 - 17523
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaaca-atcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| |||||| ||||| |||||||| || |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| |    
T  17686 aaaccaacaacaacaacttatttcacaacaacatattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatc 17587  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  17586 tattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataat 17523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 87; Significance: 9e-42; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 80 - 233
Target Start/End: Complemental strand, 109736 - 109582
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| ||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||  | |||||| | ||||||||||| |    
T  109736 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaatcccaagccatgaattatcatcaacaacatgacttagcaacaacaacatc 109637  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
     |||||||||||||| ||||||||||||||||||||   ||||||||||||||||    
T  109636 aattgatcatgaaacttatcacaattcatcaacaacttagcataattcaccaatt 109582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 118237 - 118081
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| ||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||  | |||||| | ||||||||||| |    
T  118237 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaccccaagccatgaattatcatcaacaacatgacttagcaacaacaacatc 118138  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattga 235  Q
     | |||||||||||| ||||||||||||||||||||   ||||||||||||||||||    
T  118137 aactgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattga 118081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 87; Significance: 9e-42; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 96 - 233
Target Start/End: Original strand, 85321 - 85459
Alignment:
Q  96 ctcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 194  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||  | |||||| | ||||||||||| | ||||||||||||||     
T  85321 ctcatttctcaacaacaaatcatgaatcatgcaaacccaaaccatgaattatcatcaacaacatgacttagcaacaacaacatcaattgatcatgaaact 85420  T
Q  195 tatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  85421 tatcacaattcatcaacaacctagcataattcaccaatt 85459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 80 - 242
Target Start/End: Original strand, 159275 - 159436
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| ||| |||||||||||||||||| |||||||||||||| ||||||||||  |||||||||||   | || ||| | ||||||||||| |    
T  159275 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcatacccaagccaaaaattatcatca---acatcacttagcaacaacaacatc 159371  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattc-accaattgagtataat 242  Q
     |||||||||||||| |||||||||||| || ||||   ||||||||| |||||||||| |||||    
T  159372 aattgatcatgaaacttatcacaattcaacatcaacatagcataattcaaccaattgagcataat 159436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 87; Significance: 9e-42; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 255081 - 254931
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||  | |||||  | ||||||||||| | ||||||    
T  255081 caacaacatctcatttctcaacaacaaaccatgaatcatgcaaactcaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattgat 254982  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  254981 catgaaacttatcacaattcatcaacaacaatgcataattcaccaattgag 254931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 261687 - 261537
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||  | |||||  | ||||||||||| | ||||||    
T  261687 caacaacatctcatttctcaacaacaaaccatgaatcatgcaaactcaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattgat 261588  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  261587 catgaaacttatcacaattcatcaacaacaatgcataattcaccaattgag 261537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 96 - 236
Target Start/End: Original strand, 38287 - 38428
Alignment:
Q  96 ctcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 194  Q
    |||||||||||||||||| | ||||||||||||||||||||  |||||||||||||||  | |||||||||||||||||||  | ||||||||||||||     
T  38287 ctcatttctcaacaacaaaccatgaatcatgcaaacccaagttatgaattatcatcaacaacatgactaaacaacaacaacgtcaattgatcatgaaact 38386  T
Q  195 tatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||||||||||||||| ||||||||||| |||||||||    
T  38387 tatcacaattcatcaacaacaatgcataattcgccaattgag 38428  T

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Target: scaffold0083 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 14857 - 15004
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcat-gaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||| |   |||| ||||||||||||||||||||||||||||||  | |||||||||||   |||||||| ||||||    
T  14857 caacaacatctcatttctcaacaacaaaccgagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaaca---acaacaacaattgat 14953  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14954 catgaaacatatcacaattcatcaacaacaatgcataattcaccaattgag 15004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 14197 - 14288
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcat-gaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa 177  Q
    |||| ||| |||||||||||||||||| |   |||| ||||||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  14197 caacaacatctcatttctcaacaacaaaccgagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaa 14288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 236
Target Start/End: Complemental strand, 15761 - 15588
Alignment:
Q  68 acccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 165  Q
    ||||||||| || |||||| |||| |||| | |||||||||||| || | |||||||||||| ||||||||||||||||| |||| |  | |||||||||    
T  15761 acccattttcaccaaaccaacaacaacaatttatttctcaacaaaaaattatgaatcatgcatacccaagccatgaattagcatctataacatgactaaa 15662  T
Q  166 caacaacaacaacca---ttgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||||||||| |   |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15661 caacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgag 15588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 843 - 693
Alignment:
Q  87 caaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||  | |||||| | ||||||||||| | ||||||    
T  843 caacaacatctcatttctcaacaacaaatcatgaatcatgccaacccaagccatgaattatcatcaacaacatgacttagcaacaacaacatcaattgat 744  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||| ||||||||||||||||||||   |||||||||||||| ||||    
T  743 catgaaacttatcacaattcatcaacaacatagcataattcaccaaatgag 693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 96 - 236
Target Start/End: Original strand, 7561 - 7699
Alignment:
Q  96 ctcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacat 195  Q
    |||||||||||||||| | |  |||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||| | |||||||||||||| |    
T  7561 ctcatttctcaacaaccaac--gaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaacaacatcaattgatcatgaaactt 7658  T
Q  196 atcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||| |||| ||||||||| |||||||||||||||||||||    
T  7659 atcataatttatcaacaacaatgcataattcaccaattgag 7699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 82; Significance: 9e-39; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 80 - 242
Target Start/End: Original strand, 55553 - 55717
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa 177  Q
    |||||| |||| |||||| ||||  |||||||||  | |||||||||||| ||||||||||||||||| |||| |  | || ||| |||||||||||||     
T  55553 aaaccaacaacaacaacttattttacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 55652  T
Q  178 ccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  55653 ctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataat 55717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 94061 - 93973
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaa 152  Q
    |||||||||||||||||  || |||| ||| ||||||||||| |||| |||||||||| |||   ||||||  ||||||||||||||||    
T  94061 tcaacccattttacaaagtcaccaacaacatctcatttctcaccaacaaatcatgaattatgttcacccaaatcatgaattatcatcaa 93973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 72 - 236
Target Start/End: Complemental strand, 253271 - 253106
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||| ||||||||| |||| ||||  ||||||||| ||| || |||||||||||||||||||||||| ||||||||||||||  | |||||| ||||| |    
T  253271 atttcacaaaaccaccaacaacaatccatttctcatcaagaaatcatgaatcatgcaaacccaagccttgaattatcatcaacaacatgacttaacaaaa 253172  T
Q  171 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||| |||||||||||||| |||||||||||| ||||||| | |||| ||||||||||||||    
T  253171 acaacaacaattgatcatgaaacttatcacaattcaacaacaacaaagcatgattcaccaattgag 253106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 73 - 236
Target Start/End: Original strand, 9903 - 10067
Alignment:
Q  73 ttttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 171  Q
    |||||| ||| || |||| ||| |||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||  | |||||  | ||||||    
T  9903 ttttaccaaaacaccaacaacatctcatttctccacaacaaatcatgaatcatgcaaacccaagccatgaataatcatcaacaacatgacatatcaacaa 10002  T
Q  172 caacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||| | |||||||||||||| |||||||||||| ||||||| | |||||||||||||||||||    
T  10003 caacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgag 10067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 80 - 233
Target Start/End: Complemental strand, 10248 - 10094
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| |||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| |    
T  10248 aaaccatcaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatc 10149  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||    
T  10148 cattgatcatgaaacttatcacaattcatcaacaaccaagcataattcgccaatt 10094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 96 - 233
Target Start/End: Original strand, 1306 - 1444
Alignment:
Q  96 ctcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 194  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||  | |||||  | ||||||||||| | ||||||||||||||     
T  1306 ctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaatgatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaact 1405  T
Q  195 tatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    |||||||||||| ||||||| | ||||||||||||||||    
T  1406 tatcacaattcaacaacaacaaagcataattcaccaatt 1444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 236
Target Start/End: Complemental strand, 11876 - 11771
Alignment:
Q  128 aacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattca 227  Q
    |||||||||||||||||||||||||  | |||||| ||||||||||||||   ||||||||||||| | |||||||||||||||||| ||||||||||||    
T  11876 aacccaagccatgaattatcatcaacaacatgacttaacaacaacaacaa---ttgatcatgaaacttttcacaattcatcaacaacaatgcataattca 11780  T
Q  228 ccaattgag 236  Q
    | |||||||    
T  11779 ctaattgag 11771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 785 - 635
Alignment:
Q  87 caaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||  | |||||| |  |||||||||| | ||||||    
T  785 caacaacatctcatttctcaacaacaaatcatgaatcatgccaacccaagccatgaattatcatcaacaacatgacttagtaacaacaacatcaattgat 686  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||| ||||||||||||||||||||   |||||||||||||| ||||    
T  685 catgaaacttatcacaattcatcaacaacatagcataattcaccaaatgag 635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 82 - 242
Target Start/End: Complemental strand, 6823 - 6662
Alignment:
Q  82 accagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaacca 180  Q
    |||| |||| |||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||| | | |    
T  6823 accaacaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaagatcta 6724  T
Q  181 ttgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  6723 ttgatcatcaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataat 6662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 80 - 236
Target Start/End: Original strand, 8960 - 9117
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| ||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||  | |||||| | ||||||||||| |    
T  8960 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcaagcaaacccaagccatgaattatcatcaacaacatgacttagcaacaacaacatc 9059  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
     | ||||| |||||| |||||||| |||||||||||   |||||||||||||||||||    
T  9060 aagtgatcttgaaacttatcacaaatcatcaacaacatagcataattcaccaattgag 9117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 80 - 242
Target Start/End: Complemental strand, 193770 - 193607
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa 177  Q
    |||||| |||| |||||| ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||| |  | || ||| |||||||||||||     
T  193770 aaaccaacaacaacaacttatttcgcaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 193671  T
Q  178 ccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    | ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||    
T  193670 ctattgatcatgaaacatatcacaa-taatcaacaaccatgcataattcaccaattgagcataat 193607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 242
Target Start/End: Complemental strand, 186801 - 186645
Alignment:
Q  87 caaccacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattga 184  Q
    |||| |||||| ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | |||||    
T  186801 caacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattga 186702  T
Q  185 tcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||    
T  186701 tcatgaaacatatcacaa-taatcaacaaccatgcataattcaccaattgagcataat 186645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 80 - 242
Target Start/End: Complemental strand, 9789 - 9626
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| |||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| |||| |  |  | ||| ||||||||||||| |    
T  9789 aaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattagcatccataacgtcacttaacaacaacaacatc 9690  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
     |||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||| |||||    
T  9689 tattgatcatgaaacttatcacaattcatcaacaaccatgcataagtcactaattgagcataat 9626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 80 - 242
Target Start/End: Original strand, 94948 - 95111
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| |||||| ||||| ||||||||| | |||||||||||| |||||| |||||||||| |||| |  | || ||| | ||||||||||| |    
T  94948 aaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaaaccatgaattagcatccataacatcacttatcaacaacaacatc 95047  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||    
T  95048 tattgatcatgaaacttatcacaattcatcaacaaccatgcataattcactaattgagcataat 95111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 80 - 236
Target Start/End: Complemental strand, 25002 - 24845
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| |||||| ||||| ||||||||| | |||||||||| | |||||||||| |||||| |||| |  | || ||| ||||||||||||| |    
T  25002 aaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgaatacccaagccaagaattaacatccataacatcacttaacaacaacaacatc 24903  T
Q  179 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
     |||||||||||||| ||||||||||||||||||||   |||||||||||||||||||    
T  24902 tattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgag 24845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 112809 - 112662
Alignment:
Q  87 caaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    |||||| |||||||||||||   ||||||    
T  112809 caacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcaacaac---atgacttaacaacaacaacataaattgat 112713  T
Q  186 catgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||| ||||||||||||||||| ||   ||||||||||| |||||||    
T  112712 catgaaacttatcacaattcatcaaccacatagcataattcactaattgag 112662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 73 - 214
Target Start/End: Original strand, 109556 - 109698
Alignment:
Q  73 ttttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 171  Q
    |||||| |||| | |||| ||| ||||||||||| |||||| ||||||||| |||| ||||||||||||||||||||||||  | || ||| | ||||||    
T  109556 ttttaccaaactaccaacaacatctcatttctcatcaacaaatcatgaatcgtgcatacccaagccatgaattatcatcaacaacatcacttagcaacaa 109655  T
Q  172 caacaaccattgatcatgaaacatatcacaattcatcaacaac 214  Q
    ||||| | | |||||||||| | |||||||||||| |||||||    
T  109656 caacatcaactgatcatgaatcttatcacaattcaacaacaac 109698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 227
Target Start/End: Complemental strand, 103211 - 103048
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 163  Q
    |||||||||||||||||  || |||| ||||||||||| ||| ||||||| ||||||| ||||| |||||| |||||||||||||||||  | || |||     
T  103211 tcaacccattttacaaagtcaccaacaacaactcatttatcaccaacaattcatgaattatgcacacccaaaccatgaattatcatcaacaacatcactt 103112  T
Q  164 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattca 227  Q
    |  ||||| |||| | ||||| ||||||   |||||||||||| |||||||   ||||||||||    
T  103111 agaaacaataacatcaattgaacatgaatgttatcacaattcaacaacaacatagcataattca 103048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 37 - 143
Target Start/End: Original strand, 28466 - 28573
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcatttctcaacaa-caatcatgaatcatgcaaacccaag 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||  |||||||||| ||| | |||||||    
T  28466 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaccaataaatcatgaattatgaacacccaag 28565  T
Q  136 ccatgaat 143  Q
    ||||||||    
T  28566 ccatgaat 28573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 21637 - 21685
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaacca 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21637 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaacca 21685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 236
Target Start/End: Original strand, 146561 - 146731
Alignment:
Q  68 acccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 165  Q
    ||||||||| || |||||| |||| |||||| ||||| ||| ||||| | |||||||||||| ||||||||||||||||| |||  |  | || ||| ||    
T  146561 acccattttcaccaaaccaacaacaacaacttatttcacaaaaacaaattatgaatcatgcatacccaagccatgaattaacatgcataacatcacttaa 146660  T
Q  166 caacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||||||| | |||||||||||||| |||||||||||||||||||||  |||||||||||||||||||    
T  146661 caacaacaacatctattgatcatgaaacttatcacaattcatcaacaacctagcataattcaccaattgag 146731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 98 - 236
Target Start/End: Original strand, 12 - 151
Alignment:
Q  98 catttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacata 196  Q
    |||||||||||||||| | ||||| |||||||||||||||||||||||||||||||  | |||||  | ||||||||||| | |||||||||||||| ||    
T  12 catttctcaacaacaaataatgaaacatgcaaacccaagccatgaattatcatcaacaagatgacatagcaacaacaacatcaattgatcatgaaactta 111  T
Q  197 tcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    ||||||||||||||| ||   ||||||||||| |||||||    
T  112 tcacaattcatcaaccacgtagcataattcacgaattgag 151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 3510 - 3589
Alignment:
Q  98 catttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaaca 176  Q
    |||||||||||||||| | ||||| |||||||||||||||||||||||||||||||  | |||||  | |||||||||||    
T  3510 catttctcaacaacaaataatgaaacatgcaaacccaagccatgaattatcatcaacaagatgacatagcaacaacaaca 3589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 210
Target Start/End: Original strand, 1332 - 1485
Alignment:
Q  59 tcattatcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 156  Q
    |||| ||||||||||||| || ||| || |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||  |     
T  1332 tcataatcaacccattttcaccaaaacaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgatttatcatcaacaac 1431  T
Q  157 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaa 210  Q
    |||||  | ||||| |||||   |||||||||||||| ||||||||||||||||    
T  1432 atgacatagcaacagcaacatttattgatcatgaaacttatcacaattcatcaa 1485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 233
Target Start/End: Complemental strand, 11834 - 11688
Alignment:
Q  87 caaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 186  Q
    |||| ||| |||||||||| |||  |||||||||| ||||||||||||| ||||||||||||||||  | |||||  | |||||||||||   |||||||    
T  11834 caacaacatctcatttctccacacaaatcatgaattatgcaaacccaagtcatgaattatcatcaacaacatgacatatcaacaacaacataaattgatc 11735  T
Q  187 atgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    |||||||  ||||||||||| ||||||| | ||||||||||||||||    
T  11734 atgaaactgatcacaattcaacaacaacaaagcataattcaccaatt 11688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 233
Target Start/End: Original strand, 4906 - 5068
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||| ||||||||| |||| ||||  ||||||||| || ||| |||||||| ||| | | ||||||||||||||||||||||  | |||||| | |||||    
T  4906 atttcacaaaaccaccaacaacaatccatttctcatcagcaaatcatgaattatgaacaaccaagccatgaattatcatcaacaacatgacttagcaaca 5005  T
Q  171 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    |||||| | |||||||||||||| |||||||||||| ||||||| |  |||||||||||||||    
T  5006 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaaatcataattcaccaatt 5068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 112 - 236
Target Start/End: Original strand, 48154 - 48277
Alignment:
Q  112 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaac 211  Q
    |||||||||| |||||| |||||||||||||||||||||||  | ||| || |||||||| || ||| |||||||||||||| | |||||||||||||||    
T  48154 aatcatgaattatgcaa-cccaagccatgaattatcatcaacaacatggcttaacaacaataataacaattgatcatgaaacttttcacaattcatcaac 48252  T
Q  212 aaccatgcataattcaccaattgag 236  Q
    ||| |  ||||||||||||||||||    
T  48253 aacaaaacataattcaccaattgag 48277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 112 - 236
Target Start/End: Original strand, 61602 - 61725
Alignment:
Q  112 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaac 211  Q
    |||||||||| |||||| |||||||||||||||||||||||  | ||| || |||||||| || ||| |||||||||||||| | |||||||||||||||    
T  61602 aatcatgaattatgcaa-cccaagccatgaattatcatcaacaacatggcttaacaacaataataacaattgatcatgaaacttttcacaattcatcaac 61700  T
Q  212 aaccatgcataattcaccaattgag 236  Q
    ||| |  ||||||||||||||||||    
T  61701 aacaaaacataattcaccaattgag 61725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 130486 - 130589
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaaccacaactcattt-ctcaacaacaatcatgaatcatgcaaacccaag 135  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||| |||| ||||||||||| |||||||||||||||||   ||| | |||||||    
T  130486 acatcatcaaaatcaaacttcttctttattaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaag 130585  T
Q  136 ccat 139  Q
    ||||    
T  130586 ccat 130589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 89655 - 89586
Alignment:
Q  167 aacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 236  Q
    |||||||||| | |||| ||||||||| |||||||||| | ||||||| | |||||||||||||||||||    
T  89655 aacaacaacatcaattgttcatgaaacttatcacaatttaacaacaacaaagcataattcaccaattgag 89586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 214
Target Start/End: Original strand, 79519 - 79647
Alignment:
Q  87 caaccacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||||||||||||||| || |||| ||||||| ||| | ||||||||||||||| |||| |||  |||| ||| | ||||||||||| | |||||     
T  79519 caacaacaactcatttctcatcaccaattcatgaattatgaatacccaagccatgaatcatcaacaataatatcacttagcaacaacaacatcaattgaa 79618  T
Q  186 catgaaacatatcacaattcatcaacaac 214  Q
    ||||   || |||| |||||| |||||||    
T  79619 catggttcacatcataattcaacaacaac 79647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 227
Target Start/End: Complemental strand, 34008 - 33854
Alignment:
Q  73 ttttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 171  Q
    |||||| |||| | |||| ||| |||||||||||||||||| |||| ||||||||| |||||||||||||||||| |||||  | || ||| | ||||||    
T  34008 ttttaccaaactaccaacaacatctcatttctcaacaacaaatcat-aatcatgcatacccaagccatgaattattatcaacaacatcacttagcaacaa 33910  T
Q  172 caacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattca 227  Q
    ||||| | |||||||||||| | |||||||||||| |||||||   ||||||||||    
T  33909 caacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattca 33854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 82 - 242
Target Start/End: Complemental strand, 308 - 147
Alignment:
Q  82 accagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaacca 180  Q
    |||| |||| |||||| ||||| |||||| || | |||||||||||| || |||||||||||||| |||| |  | || ||| |||||||||||||   |    
T  308 accaacaacaacaacttatttcacaacaataaattatgaatcatgcatactcaagccatgaattagcatccataacatcacttaacaacaacaacattta 209  T
Q  181 ttgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagtataat 242  Q
    ||||||||||||| ||||| ||||||||||  |  ||||||||||||||||||||| |||||    
T  208 ttgatcatgaaacttatcataattcatcaattattatgcataattcaccaattgagcataat 147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 52; Significance: 7e-21; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 73 - 211
Target Start/End: Original strand, 31010 - 31149
Alignment:
Q  73 ttttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 171  Q
    |||||| ||| || |||| ||| |||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||| |  | ||  | || |||    
T  31010 ttttaccaaaacaccaacaacatctcatttctcaacaacaagtcatgaatcatgcatacccaagccataaattatcatcaaaaacctcacatatcagcaa 31109  T
Q  172 caacaaccattgatcatgaaacatatcacaattcatcaac 211  Q
    ||||| | ||| |||||||||| |||||||||||| ||||    
T  31110 caacatcaattaatcatgaaacttatcacaattcaacaac 31149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 227
Target Start/End: Original strand, 70676 - 70734
Alignment:
Q  169 caacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattca 227  Q
    |||||||| | |||||||||||||| |||||||||||| ||||||| | ||||||||||    
T  70676 caacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattca 70734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 148
Target Start/End: Complemental strand, 97487 - 97403
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatca 148  Q
    |||||||||||||||||||||  ||| |||||||| |||| | || | |||||||| | ||| ||||||||| ||||||| ||||    
T  97487 tcaacccattttacaaaaccaataacaacaactcaattcttatcatcaaatcatgatttatgaaaacccaaggcatgaatcatca 97403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 33668 - 33789
Alignment:
Q  112 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaac 211  Q
    |||||||||| ||| | |||| |||||||||| |||| |||  |||| ||| | ||||||||||| | |||||||||||||| ||||| |||||||||||    
T  33668 aatcatgaattatgaacaccctagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgatcatgaaacttatcaaaattcatcaac 33767  T
Q  212 aaccatgcataattcaccaatt 233  Q
    |||   ||||||||||||||||    
T  33768 aacatagcataattcaccaatt 33789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 3299 - 3419
Alignment:
Q  87 caaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgat 185  Q
    |||| ||| |||||||||||||||||| |||||||||||||| ||||||||||||||||| |||| |  | || ||| | ||||| ||||| | ||||||    
T  3299 caactacatctcatttctcaacaacaaatcatgaatcatgcatacccaagccatgaattaacatccacaacatcacttagcaacatcaacatcaattgat 3398  T
Q  186 catgaaacatatcacaattca 206  Q
    |||||| | ||||||||||||    
T  3399 catgaatcttatcacaattca 3419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 4351 - 4414
Alignment:
Q  172 caacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattga 235  Q
    ||||||| ||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||    
T  4351 caacaacaattgatcataaaacttatcacaattcatcaacaacaatgcataattcaccaattga 4414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 4287 - 4353
Alignment:
Q  87 caaccacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaa 152  Q
    |||| ||| |||||||||||||||||| | | |||| |||||||||||| |||||||||||||||||    
T  4287 caacaacatctcatttctcaacaacaaaccaagaattatgcaaacccaaaccatgaattatcatcaa 4353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 178
Target Start/End: Complemental strand, 24471 - 24372
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 178  Q
    |||||| |||| ||||  |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||  | |||||  | |||||||||||||    
T  24471 aaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagacatgaattatcatcaacaacatgacatagcaacaacaacaac 24372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 72 - 233
Target Start/End: Complemental strand, 77129 - 76967
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||| ||||||||| |||| ||||||||||||||| |||||| |||||||| ||| | ||||||||||||||| ||||  ||  |||| ||| | |||||    
T  77129 atttcacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaataacaatatcacttagcaaca 77030  T
Q  171 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    |||||| | ||||| |||||| |  | ||||||||| |||||||   |||||||||| |||||    
T  77029 acaacatcaattgaacatgaatctcaccacaattcaacaacaacatagcataattcaacaatt 76967  T

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Target: scaffold0009 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 65 - 214
Target Start/End: Original strand, 69415 - 69565
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 163  Q
    ||||||||||||||||||||| |||| ||| |||| |||||| || ||| |||||| | ||| | ||||||||||||||| |||| |||  |||| |||     
T  69415 tcaacccattttacaaaaccaacaacaacacctcaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcactt 69514  T
Q  164 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaac 214  Q
    | ||||||||||| | ||||| |||||| |  ||||||||||| |||||||    
T  69515 agcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaac 69565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 96 - 212
Target Start/End: Original strand, 1905 - 2022
Alignment:
Q  96 ctcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 194  Q
    |||||||||||||||||| |||||||||||||| || ||||||| ||||||||||||   | |||||| | ||||||||||| | |||||||||||| |     
T  1905 ctcatttctcaacaacaaatcatgaatcatgcatactcaagccaagaattatcatcatcaacatgacttagcaacaacaacatcaattgatcatgaatct 2004  T
Q  195 tatcacaattcatcaaca 212  Q
    ||| |||| ||| |||||    
T  2005 tataacaaatcaacaaca 2022  T

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Target: scaffold0080 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 176
Target Start/End: Complemental strand, 44087 - 43975
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 163  Q
    ||||||||||||||||||||| |||| ||||||||||||||| || | |||||||| | ||| | ||||||||||||||| |||| |||  |||| |||     
T  44087 tcaacccattttacaaaaccaacaacaacaactcatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcactt 43988  T
Q  164 aacaacaacaaca 176  Q
    | |||||||||||    
T  43987 agcaacaacaaca 43975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 233
Target Start/End: Original strand, 270 - 436
Alignment:
Q  68 acccattttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaac 166  Q
    ||||| |||||||||||| |||| ||||||||||||||| |||| |||||||||| |||   ||||||| ||||||| |||| |||| | || ||| | |    
T  270 acccagtttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgagcacccaaggcatgaataatcaacaaaaacatcacttagc 369  T
Q  167 aacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    |||||||||| | ||||| |||||  | || ||||||||| ||| |||   |||||||||| |||||    
T  370 aacaacaacatcaattgaacatgactcttaccacaattcaacaataacatagcataattcaacaatt 436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 13048 - 12990
Alignment:
Q  40 tcatcaaaatcaaacttcttcattatcaacccatttt-acaaaaccagcaaccacaact 97  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||    
T  13048 tcatcaaaatcaaacttcttcattatcaacccattttcacaaaaccatcaacaacaact 12990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 150
Target Start/End: Original strand, 7814 - 7878
Alignment:
Q  87 caaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatc 150  Q
    |||| ||| |||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||    
T  7814 caacaacatctcatttctcaacaacaaatcatgaatcatgcatacccaagccatgaattaacatc 7878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 227
Target Start/End: Original strand, 2483 - 2646
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 163  Q
    ||||||||||||| ||||||| |||| |||| |||||||||| || | |||||||| | ||| | |||||| |||||||| |||| |||  |||| |||     
T  2483 tcaacccattttagaaaaccaacaacaacaagtcatttctcatcatcaaatcatgatttatgaacacccaaaccatgaatcatcaacaacaatatcactt 2582  T
Q  164 aacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattca 227  Q
    | ||||||||||| | ||||| |||||| |  |||| |||||| |||||||   ||||||||||    
T  2583 agcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaacatagcataattca 2646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 6622 - 6708
Alignment:
Q  68 acccattttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaa 153  Q
    ||||| |||||||||||| |||| ||||||||||||||| |||| |||||||||| |||   ||||||||||||||| |||| ||||    
T  6622 acccagtttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaccacccaagccatgaatcatcaacaaa 6708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 35444 - 35520
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatca 148  Q
    |||||||||||||| |||| ||||||||||||||| |||||| |||||||| ||| | ||||||||||||||| ||||    
T  35444 attttacaaaaccaccaac-acaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatca 35520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 203
Target Start/End: Complemental strand, 7307 - 7175
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 170  Q
    |||||||||||||| ||  |||||||||||||||| |||||| |||||||| ||| | || |||||||||||| |||| |||  |||| ||| | || ||    
T  7307 attttacaaaaccatcattcacaactcatttctcatcaacaattcatgaattatgaacactcaagccatgaatcatcaacaacaatatcacttagcagca 7208  T
Q  171 acaacaaccattgatcatgaaacatatcacaat 203  Q
    |||||| | ||||| |||||  | |||||||||    
T  7207 acaacatcaattgaacatgattcttatcacaat 7175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 12694 - 12734
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaacccatttta 77  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  12694 acatcatcaaaatcaaacttcttcactatcaacccatttta 12734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 72
Target Start/End: Complemental strand, 3427 - 3392
Alignment:
Q  37 acatcatcaaaatcaaacttcttcattatcaaccca 72  Q
    ||||||||||||||||||||||||||||||||||||    
T  3427 acatcatcaaaatcaaacttcttcattatcaaccca 3392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 22786 - 22715
Alignment:
Q  80 aaaccagcaaccacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatc 150  Q
    |||||| |||| |||||| ||||| ||||||||| | |||||||||||| |||||| |||||||||| ||||    
T  22786 aaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaaaccatgaattagcatc 22715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 233
Target Start/End: Complemental strand, 2607 - 2436
Alignment:
Q  64 atcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgac 161  Q
    ||||||||||||| || |||||| |||| |||||| |||||||| || |||  ||||||| ||| |  |||||||||||||| ||||||||  | || ||    
T  2607 atcaacccattttcaccaaaccaacaacaacaacttatttctcatcatcaaaacatgaattatgaacgcccaagccatgaatcatcatcaacaacatcac 2508  T
Q  162 taaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaatt 233  Q
    | |  |||||||||| | ||||| |||||  | ||||| |||||| |||||||   |||||||||| |||||    
T  2507 ttaggaacaacaacatcaattgaacatgagtcttatcataattcaacaacaacatagcataattcatcaatt 2436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 214
Target Start/End: Complemental strand, 197545 - 197392
Alignment:
Q  65 tcaacccattttacaaaac---cagcaaccacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatga 160  Q
    |||||||||||||||||||   || |||| |||||||| |||||| || |||  ||||| | ||| | |||||| |||||||| |||| |||  |||| |    
T  197545 tcaacccattttacaaaactaacaacaacaacaactcaattctcatcatcaaagcatgatttatgaagacccaaaccatgaatcatcaacaacaatatca 197446  T
Q  161 ctaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaac 214  Q
    || | ||||||||||| | ||||| |||||| |  ||||||||||| |||||||    
T  197445 cttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaac 197392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1734 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1734
Description:

Target: scaffold1734; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 1364 - 1422
Alignment:
Q  72 attttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaa 129  Q
    |||| ||||||||| |||| ||||  |||||||||||||| ||||||||||||||||||    
T  1364 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaa 1422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 206
Target Start/End: Original strand, 30978 - 31120
Alignment:
Q  65 tcaacccattttacaaaaccagcaaccacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 163  Q
    |||||||||||||||||| || |||| |||||||| |||||| || | |||| ||| | ||| | || |||||||||||| |||| |||   ||| |||     
T  30978 tcaacccattttacaaaagcaacaacaacaactcaattctcatcatcaaatcttgatttatgaacactcaagccatgaatcatcaacaacagtatcactt 31077  T
Q  164 aacaacaacaacaaccattgatcatgaaacatatcacaattca 206  Q
    | ||||||||||| | ||||| |||||| |  |||||||||||    
T  31078 agcaacaacaacatcaattgaacatgaatctcatcacaattca 31120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 176
Target Start/End: Original strand, 107967 - 108080
Alignment:
Q  64 atcaacccatttt-acaaaaccagcaaccacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgact 162  Q
    ||||||||||||| | ||||||| |||| |||||| |||||||| ||| | |||||| | ||| | |||||||| |||||| |||| |||  ||||  ||    
T  107967 atcaacccatttttaaaaaaccaacaacaacaacttatttctcatcaaaattcatgatttatgaacacccaagctatgaatcatcaacaacaatatatct 108066  T
Q  163 aaacaacaacaaca 176  Q
     |||||||||||||    
T  108067 taacaacaacaaca 108080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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