View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0592_low_11 (Length: 388)
Name: NF0592_low_11
Description: NF0592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0592_low_11 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 345; Significance: 0; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 11 - 359
Target Start/End: Original strand, 7615597 - 7615945
Alignment:
Q |
11 |
cacagagcaccaaaggtgagttaaaagcgcttgtagagaagatattttgatggtaccaatctcatcattgattttcgattttagttgtacaattttctct |
110 |
Q |
|
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
7615597 |
cacagagcaccaaaggtgagttaaaagcacttgtagagaagatattttgatggtaccaatctcatcattgattttcgattttagttgtacaattttctct |
7615696 |
T |
 |
Q |
111 |
tttgtgaaatgaaatatcctatttgataaacaaagtttttcctcattagacgacgaaaaactcaattcatcaccgtaaacgaaaggaaatcgtatgggct |
210 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
7615697 |
tttgtgaaatgaaatatcctatttgataaacaaagtttttcctcattagacgacgaaaaactcaattcatcaccgtaaacgaaaggaaatcgtatgggct |
7615796 |
T |
 |
Q |
211 |
gttgaacaccatttggaaaccaacgctctagtgttgggggtttagatatttgatgatgacaacaactacgtgatatttcagcccatgaattgatgaaatg |
310 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
7615797 |
gttgaacaccatttggaaaccaacgctctagtgttgggggtttagatatttgatgatgacaacaactacgtgatatttcagcccatgaattgatgaaatg |
7615896 |
T |
 |
Q |
311 |
ccacacagactctccgtcaacgacaacatggttgaacgagcaaccaata |
359 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
7615897 |
ccacacagactctccgtcaacgacaacatggttgaacgagcaaccaata |
7615945 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 12 - 358
Target Start/End: Original strand, 7606584 - 7606948
Alignment:
Q |
12 |
acagagcaccaaaggtgagttaaaagcgcttgtagagaagatattttgatggtaccaatctcatcattgattttcgattttagttgtacaattttctctt |
111 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||| ||||||| |||||||| | |
|
|
T |
7606584 |
acagagcaccaaaggtgagttaaaagcgcttgtagagaagttattttgatggtaccaacctcttcattgattttcgatttcagttgtatgattttctcct |
7606683 |
T |
 |
Q |
112 |
ttgtgaaatgaaatatcctatttgataaacaaagtttttcctcattagacgacgaaaaactcaattcatcaccgt------------------aaacgaa |
193 |
Q |
|
|
||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| || | ||| |
|
|
T |
7606684 |
ttgtgaaatgaaataacctatttgataaacaaagtttttcctcattagacgatgaaaaactcaactcatcacagtgattattttgttgctccgtagtgaa |
7606783 |
T |
 |
Q |
194 |
aggaaatcgtatgggctgttgaacaccatttggaaaccaacgctctagtgttgggggtttagatatttgatgatgacaacaactacgtgatatttcagcc |
293 |
Q |
|
|
||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||| | |||||||| ||||||||||||||| |
|
|
T |
7606784 |
aggaaatcgtatgggaagttgaataccatttggaaaccaacgctctagtgttgggggtttggatatttgatcaccacaacaaccgcgtgatatttcagcc |
7606883 |
T |
 |
Q |
294 |
catgaattgatgaaatgccacacagactctccgtcaacgacaacatggttgaacgagcaaccaat |
358 |
Q |
|
|
||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |
|
|
T |
7606884 |
catgaattgatgaaatgccacacggactttccgtcaacgacaacatggttgaaggagcaaccaat |
7606948 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 191 - 358
Target Start/End: Original strand, 7637612 - 7637779
Alignment:
Q |
191 |
gaaaggaaatcgtatgggctgttgaacaccatttggaaaccaacgctctagtgttgggggtttagatatttgatgatgacaacaactacgtgatatttca |
290 |
Q |
|
|
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
7637612 |
gaaaggaaatcgtataggccgttgaacaccatttggaaaccaacgctctagtgttgggggtttagatatttgatgatgacaacaactacgtgagatttca |
7637711 |
T |
 |
Q |
291 |
gcccatgaattgatgaaatgccacacagactctccgtcaacgacaacatggttgaacgagcaaccaat |
358 |
Q |
|
|
||||| |||||||||||||||||||| |||| ||||||||||||||||||||| || ||||||||||| |
|
|
T |
7637712 |
gcccaggaattgatgaaatgccacacggactttccgtcaacgacaacatggttaaatgagcaaccaat |
7637779 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 191 - 359
Target Start/End: Original strand, 7629166 - 7629334
Alignment:
Q |
191 |
gaaaggaaatcgtatgggctgttgaacaccatttggaaaccaacgctctagtgttgggggtttagatatttgatgatgacaacaactacgtgatatttca |
290 |
Q |
|
|
|||||||||||||||||| |||||| |||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
7629166 |
gaaaggaaatcgtatgggaagttgaataccatttggaaaccaacgttcagatgttggaggtttagatatttgatgatgacaacaactacgtgagatttca |
7629265 |
T |
 |
Q |
291 |
gcccatgaattgatgaaatgccacacagactctccgtcaacgacaacatggttgaacgagcaaccaata |
359 |
Q |
|
|
|||||||||||||||||||||||||| |||| ||||||||| |||||||||||||| | |||||||||| |
|
|
T |
7629266 |
gcccatgaattgatgaaatgccacacggactttccgtcaacaacaacatggttgaatgtgcaaccaata |
7629334 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 11 - 175
Target Start/End: Original strand, 7637414 - 7637578
Alignment:
Q |
11 |
cacagagcaccaaaggtgagttaaaagcgcttgtagagaagatattttgatggtaccaatctcatcattgattttcgattttagttgtacaattttctct |
110 |
Q |
|
|
|||| ||||||||| |||||||||||| ||||||||||||||||||||| |||| || ||||| || |||||||||||||| | ||||| |||||||| |
|
|
T |
7637414 |
cacatagcaccaaacgtgagttaaaagtgcttgtagagaagatattttggtggtgccgatctcttcgttgattttcgatttcaattgtaggattttctcc |
7637513 |
T |
 |
Q |
111 |
tttgtgaaatgaaatatcctatttgataaacaaagtttttcctcattagacgacgaaaaactcaa |
175 |
Q |
|
|
|||||||||||||||| |||||||||||||||| ||||||||||||| |||| ||||||||||| |
|
|
T |
7637514 |
tttgtgaaatgaaataacctatttgataaacaatatttttcctcattaaacgatgaaaaactcaa |
7637578 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 7628968 - 7629124
Alignment:
Q |
11 |
cacagagcaccaaaggtgagttaaaagcgcttgtagagaagatattttgatggtaccaatctcatcattgattttcgattttagttgtacaattttctct |
110 |
Q |
|
|
|||| ||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||| | |||||||| ||||| ||||| || |||||||| |
|
|
T |
7628968 |
cacatagcaccaaacatgagttagaagcgcttgtagagaagatattttgatgttaccaatctctttgttgatttttgatttcagttgcacgattttctcc |
7629067 |
T |
 |
Q |
111 |
tttgtgaaatgaaatatcctatttgataaacaaagtttttcctcattagacgacgaa |
167 |
Q |
|
|
||||| || || |||| ||||||||||||||||||||||| |||||||| |||||| |
|
|
T |
7629068 |
tttgtaaagtggaataatctatttgataaacaaagtttttcatcattagatgacgaa |
7629124 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 192 - 346
Target Start/End: Complemental strand, 7655710 - 7655559
Alignment:
Q |
192 |
aaaggaaatcgtatgggctgttgaacaccatttggaaaccaacgctctagtgttgggggtttagatatttgatgatgacaacaactacgtgatatttcag |
291 |
Q |
|
|
|||||||||||||| || |||||| |||||||||||||||||||| || ||||||| |||||||||||||||||| |||| |||||| ||||||| |
|
|
T |
7655710 |
aaaggaaatcgtataggtcgttgaattccatttggaaaccaacgctccagcgttggggagttagatatttgatgatga---caaccacgtgacatttcag |
7655614 |
T |
 |
Q |
292 |
cccatgaattgatgaaatgccacacagactctccgtcaacgacaacatggttgaa |
346 |
Q |
|
|
|||| |||||||||||||||||| |||| ||||||| | || ||||||||||| |
|
|
T |
7655613 |
cccacgaattgatgaaatgccacgtggactgtccgtcagctacgacatggttgaa |
7655559 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 7655902 - 7655748
Alignment:
Q |
18 |
caccaaaggtgagttaaaagcgcttgtagagaagatattttgatggtaccaatctcatcattgattttcgattttagttgtacaattttctcttttgtga |
117 |
Q |
|
|
|||||||| |||||||||||||||||||||||||||||||| ||||| ||||||| |||||| ||||||||| ||||| | ||||||| ||||| | |
|
|
T |
7655902 |
caccaaagatgagttaaaagcgcttgtagagaagatatttttttggtatcaatctctgcattgactttcgatttcagttgcatgattttcttctttgtaa |
7655803 |
T |
 |
Q |
118 |
aatgaaatatcctatttgataaacaaagtttttcctcattagacgacgaaaaact |
172 |
Q |
|
|
| ||||||||||| | ||||| | | |||||||| |||| ||| ||||||||||| |
|
|
T |
7655802 |
agtgaaatatcctctctgatagaaagagtttttcgtcatcagaagacgaaaaact |
7655748 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 39098047 - 39098086
Alignment:
Q |
20 |
ccaaaggtgagttaaaagcgcttgtagagaagatattttg |
59 |
Q |
|
|
|||||||||||||||||| ||||||| ||||||||||||| |
|
|
T |
39098047 |
ccaaaggtgagttaaaagtgcttgtaaagaagatattttg |
39098086 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 7633703 - 7633759
Alignment:
Q |
17 |
gcaccaaaggtgagttaaaagcgcttgtagagaagatattttgatggtaccaatctc |
73 |
Q |
|
|
|||||||||||||| ||||||||| | ||| || ||||||||| |||||||||||| |
|
|
T |
7633703 |
gcaccaaaggtgagctaaaagcgcatataggaaatatattttgacggtaccaatctc |
7633759 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 167; Significance: 2e-89; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 11 - 358
Target Start/End: Complemental strand, 8935873 - 8935508
Alignment:
Q |
11 |
cacagagcaccaaaggtgagttaaaagcgcttgtagagaagatattttgatggtaccaatctcatcattgattttcgattttagttgtacaattttctct |
110 |
Q |
|
|
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||| || ||||| ||||||||| |
|
|
T |
8935873 |
cacacagcaccaaaggtgagttaaaggcgcttgtagagaagatattttgatggtaccaatctcttcattgatttttaatttcagctgtacgattttctct |
8935774 |
T |
 |
Q |
111 |
tttgtgaaatgaaatatcctatttgataaacaaagtttttcctcattagacgacgaaaaactcaattcatcaccgt------------------aaacga |
192 |
Q |
|
|
||||||||||||||||| |||||||| |||||||||||||| |||| ||||| |||||||||| ||||| || || || |
|
|
T |
8935773 |
tttgtgaaatgaaatattctatttgagaaacaaagtttttcatcatctaacgacaaaaaactcaacccatcagagtgattcttttgttgctccaaagtga |
8935674 |
T |
 |
Q |
193 |
aaggaaatcgtatgggctgttgaacaccatttggaaaccaacgctctagtgttgggggtttagatatttgatgatgacaacaactacgtgatatttcagc |
292 |
Q |
|
|
||||||||||||| ||| |||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |
|
|
T |
8935673 |
aaggaaatcgtattggccgttgaacaccatccggaaaccaacgttctagtgttggaggtttagatatttgatgatgacaacaactacgtgagatttcagc |
8935574 |
T |
 |
Q |
293 |
ccatgaattgatgaaatgccacacagactctccgtcaacgacaacatggttgaacgagcaaccaat |
358 |
Q |
|
|
||| ||||||||||||||||||||||||| |||||||| |||| | ||||| || ||||||||||| |
|
|
T |
8935573 |
ccaagaattgatgaaatgccacacagactttccgtcaatgacagcgtggttaaatgagcaaccaat |
8935508 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 26 - 358
Target Start/End: Complemental strand, 8910919 - 8910573
Alignment:
Q |
26 |
gtgagttaaaagcgcttgtagagaagatattttgatggtaccaatctcatcattgattttcgattttagttgtacaattttctcttttgtgaaatgaaat |
125 |
Q |
|
|
|||||||||||| ||||||||||||||||||||| |||| || ||||| || |||||||||||||| | ||||| |||||||| ||||||||||||||| |
|
|
T |
8910919 |
gtgagttaaaagtgcttgtagagaagatattttggtggtgccgatctcttcgttgattttcgatttcaattgtaggattttctcctttgtgaaatgaaat |
8910820 |
T |
 |
Q |
126 |
atcctatttgataaacaaagtttttcctcattagacgacgaaaaactcaattcatcaccgtaaac------------------gaaaggaaatcgtatgg |
207 |
Q |
|
|
| |||||||||||||||| |||||||||||||| ||| ||||||||||| ||||| || | | ||||||||||||||| | |
|
|
T |
8910819 |
aacctatttgataaacaatgtttttcctcattaagcgatgaaaaactcaacccatcagagtgatccttttgttgctccaaagtgaaaggaaatcgtatag |
8910720 |
T |
 |
Q |
208 |
gctgttgaacaccatttggaaaccaacgctctagtgttgggggtttagatatttgatgatgacaacaactacgtgatatttcagcccatgaattgatgaa |
307 |
Q |
|
|
|| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||| ||||| |
|
|
T |
8910719 |
gccgttgaac----tttggaaaccaacgctctagtgttgggggtttagatatttgataatgacaacaactacgtgagatttcagcccaggaattaatgaa |
8910624 |
T |
 |
Q |
308 |
atgccacacagactctccgtcaacgacaacatggttgaacgagcaaccaat |
358 |
Q |
|
|
||||||||| |||| ||||||||||||||||||||| || ||||||||||| |
|
|
T |
8910623 |
atgccacacggactttccgtcaacgacaacatggttaaatgagcaaccaat |
8910573 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 250 - 358
Target Start/End: Complemental strand, 8934675 - 8934567
Alignment:
Q |
250 |
gtttagatatttgatgatgacaacaactacgtgatatttcagcccatgaattgatgaaatgccacacagactctccgtcaacgacaacatggttgaacga |
349 |
Q |
|
|
||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||||| || || |
|
|
T |
8934675 |
gtttaaatatttgatgatgacaacaactacgtgagatttcagcccatgaattgatgaaatgccacacagactttccgtcaatgacagcgtggttaaatga |
8934576 |
T |
 |
Q |
350 |
gcaaccaat |
358 |
Q |
|
|
||||||||| |
|
|
T |
8934575 |
gcaaccaat |
8934567 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 8930211 - 8930112
Alignment:
Q |
259 |
tttgatgatgacaacaactacgtgatatttcagcccatgaattgatgaaatgccacacagactctccgtcaacgacaacatggttgaacgagcaaccaat |
358 |
Q |
|
|
||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||| |||| |||| | ||||| || ||||||||||| |
|
|
T |
8930211 |
tttgatgatgacaacaactacgtgagatttcagcccatgaattgatgaaatgtcacacagactttccatcaatgacagcgtggttaaatgagcaaccaat |
8930112 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 8918924 - 8918826
Alignment:
Q |
17 |
gcaccaaaggtgagttaaaagcgcttgtagagaagatattttgatggtaccaatctcatcattgattttcgattttagttgtacaattttctcttttgt |
115 |
Q |
|
|
|||||||||||||| ||||||||| | ||| || ||||||||| |||||||||||| |||| ||| ||||| ||||||| |||||||| ||||| |
|
|
T |
8918924 |
gcaccaaaggtgagctaaaagcgcatataggaaatatattttgacggtaccaatctctgtgttgacttttgatttcagttgtaagattttctcctttgt |
8918826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 192 - 310
Target Start/End: Complemental strand, 15190757 - 15190642
Alignment:
Q |
192 |
aaaggaaatcgtatgggctgttgaacaccatttggaaaccaacgctctagtgttgggggtttagatatttgatgatgacaacaactacgtgatatttcag |
291 |
Q |
|
|
||||||||||||||||| |||||| ||||||||||| |||| || |||||||| ||| |||||||| |||| ||| ||| |||||| ||||||| |
|
|
T |
15190757 |
aaaggaaatcgtatgggacgttgaattccatttggaaataaacgttcaagtgttggaggtacagatattt---gatggcaagaaccacgtgagatttcag |
15190661 |
T |
 |
Q |
292 |
cccatgaattgatgaaatg |
310 |
Q |
|
|
|| ||||||||||||||| |
|
|
T |
15190660 |
ccagtgaattgatgaaatg |
15190642 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 315
Target Start/End: Original strand, 6501058 - 6501176
Alignment:
Q |
193 |
aaggaaatcgtatgggctgttgaacaccatttggaaaccaacgctctagtgttgggggtttagatatttgatgatgacaacaactacgtgatatttcagc |
292 |
Q |
|
|
||||||||||||||| | |||| | ||||||||||| |||| ||||||| |||| |||| |||||||||| | ||||||| |||||| |||||||| |
|
|
T |
6501058 |
aaggaaatcgtatggaacgctgaatatcatttggaaac-aacgttctagtgatgggagtttggatatttgatta---caacaaccacgtgaaatttcagc |
6501153 |
T |
 |
Q |
293 |
ccatgaattgatgaaatgccaca |
315 |
Q |
|
|
||| ||| |||| |||||||||| |
|
|
T |
6501154 |
ccaggaactgataaaatgccaca |
6501176 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 313
Target Start/End: Original strand, 11969547 - 11969575
Alignment:
Q |
285 |
atttcagcccatgaattgatgaaatgcca |
313 |
Q |
|
|
||||||||||||||||||||||||||||| |
|
|
T |
11969547 |
atttcagcccatgaattgatgaaatgcca |
11969575 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 192 - 331
Target Start/End: Complemental strand, 40146959 - 40146823
Alignment:
Q |
192 |
aaaggaaatcgtatgggctgttgaacaccatttggaaaccaacgctctagtgttgggggtttagatatttgatgatgacaacaactacgtgatatttcag |
291 |
Q |
|
|
||||||||||||||||| ||||||| |||| ||||||||||||| ||||| ||| | |||| |||| ||||| || ||||||| ||| || |||| | |
|
|
T |
40146959 |
aaaggaaatcgtatgggatgttgaataccacttggaaaccaacgttctagcgttatgagtttggatacttgat--tg-caacaaccacgcgagattttcg |
40146863 |
T |
 |
Q |
292 |
cccatgaattgatgaaatgccacacagactctccgtcaac |
331 |
Q |
|
|
|||||||||| |||||| |||| |||||||||||||| |
|
|
T |
40146862 |
cccatgaattaatgaaaagccatgtggactctccgtcaac |
40146823 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 309
Target Start/End: Original strand, 8103025 - 8103139
Alignment:
Q |
195 |
ggaaatcgtatgggctgttgaacaccatttggaaaccaacgctctagtgttgggggtttagatatttgatgatgacaacaactacgtgatatttcagccc |
294 |
Q |
|
|
|||||||||||||| ||||| ||||| |||||||||||| || ||||||| | |||| ||| |||||| ||||| || |||||| |||||||||| |
|
|
T |
8103025 |
ggaaatcgtatgggacattgaataccatctggaaaccaacgttcaagtgttgagagtttggatgtttgattgcaacaaccaccacgtgagatttcagccc |
8103124 |
T |
 |
Q |
295 |
atgaattgatgaaat |
309 |
Q |
|
|
| ||||| ||||||| |
|
|
T |
8103125 |
acgaattaatgaaat |
8103139 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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