View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0592_low_20 (Length: 320)

Name: NF0592_low_20
Description: NF0592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0592_low_20
NF0592_low_20
[»] chr1 (45 HSPs)
chr1 (199-320)||(19897174-19897296)
chr1 (199-318)||(12115177-12115297)
chr1 (199-318)||(4969590-4969710)
chr1 (200-318)||(40290006-40290127)
chr1 (202-320)||(40902325-40902444)
chr1 (97-166)||(12115077-12115146)
chr1 (202-315)||(17985290-17985404)
chr1 (97-163)||(4969489-4969555)
chr1 (202-318)||(17611425-17611542)
chr1 (202-320)||(2026948-2027067)
chr1 (97-166)||(19897330-19897399)
chr1 (202-320)||(12139252-12139372)
chr1 (98-166)||(30562908-30562976)
chr1 (98-164)||(30002364-30002430)
chr1 (218-305)||(30002454-30002541)
chr1 (201-318)||(7113865-7113983)
chr1 (202-315)||(30002214-30002328)
chr1 (98-166)||(2026846-2026914)
chr1 (98-166)||(12139149-12139217)
chr1 (98-166)||(17611577-17611645)
chr1 (223-320)||(4969362-4969461)
chr1 (223-318)||(17611674-17611770)
chr1 (202-318)||(30563011-30563129)
chr1 (100-166)||(40902480-40902546)
chr1 (223-316)||(12114954-12115050)
chr1 (97-166)||(17985441-17985510)
chr1 (98-166)||(1549452-1549520)
chr1 (218-318)||(2026721-2026822)
chr1 (98-166)||(7114016-7114084)
chr1 (199-248)||(9172152-9172201)
chr1 (199-248)||(9180134-9180183)
chr1 (218-318)||(1549327-1549428)
chr1 (209-249)||(25779959-25779999)
chr1 (98-166)||(30306904-30306972)
chr1 (98-165)||(25780043-25780110)
chr1 (218-318)||(30562784-30562884)
chr1 (271-318)||(33128420-33128467)
chr1 (260-318)||(19897466-19897524)
chr1 (260-318)||(25267181-25267239)
chr1 (260-305)||(17985575-17985620)
chr1 (218-315)||(25780134-25780231)
chr1 (102-166)||(49564404-49564467)
chr1 (260-319)||(9877659-9877718)
chr1 (212-247)||(25267387-25267422)
chr1 (260-318)||(49564185-49564243)
[»] chr7 (59 HSPs)
chr7 (199-318)||(31894481-31894600)
chr7 (199-320)||(1511188-1511309)
chr7 (97-166)||(1511339-1511408)
chr7 (202-318)||(28408470-28408586)
chr7 (97-166)||(44307741-44307810)
chr7 (202-318)||(7417741-7417857)
chr7 (202-316)||(32523431-32523546)
chr7 (97-166)||(10878751-10878819)
chr7 (98-166)||(32177980-32178048)
chr7 (98-166)||(45746876-45746944)
chr7 (199-319)||(44307842-44307965)
chr7 (223-318)||(1511437-1511532)
chr7 (202-315)||(32178083-32178197)
chr7 (202-318)||(8437305-8437422)
chr7 (98-166)||(32523326-32523394)
chr7 (99-166)||(31894381-31894448)
chr7 (202-318)||(19305740-19305860)
chr7 (202-318)||(49114090-49114208)
chr7 (98-166)||(7417637-7417705)
chr7 (98-166)||(8437457-8437525)
chr7 (223-318)||(10878625-10878723)
chr7 (98-161)||(29226394-29226457)
chr7 (223-318)||(31894258-31894352)
chr7 (223-318)||(8437554-8437651)
chr7 (199-252)||(10878852-10878905)
chr7 (204-249)||(24986788-24986833)
chr7 (202-315)||(32832462-32832576)
chr7 (97-161)||(8869729-8869793)
chr7 (98-166)||(19305896-19305964)
chr7 (218-318)||(32177855-32177956)
chr7 (209-249)||(37453148-37453188)
chr7 (218-319)||(7417510-7417613)
chr7 (214-315)||(2933289-2933391)
chr7 (199-248)||(30060474-30060523)
chr7 (97-166)||(30060556-30060625)
chr7 (218-315)||(32523204-32523302)
chr7 (98-166)||(37453219-37453287)
chr7 (261-318)||(44307611-44307668)
chr7 (98-166)||(28408367-28408435)
chr7 (218-318)||(49113862-49113963)
chr7 (98-166)||(49113987-49114054)
chr7 (202-249)||(45746794-45746841)
chr7 (260-318)||(45747011-45747069)
chr7 (97-166)||(8900205-8900274)
chr7 (260-320)||(32072202-32072262)
chr7 (98-166)||(32832360-32832428)
chr7 (98-161)||(8871333-8871396)
chr7 (260-319)||(21733067-21733126)
chr7 (260-303)||(23036662-23036705)
chr7 (260-302)||(21733324-21733366)
chr7 (218-316)||(28408244-28408343)
chr7 (218-320)||(32832232-32832335)
chr7 (218-316)||(37453311-37453410)
chr7 (97-166)||(8114788-8114857)
chr7 (271-316)||(8869584-8869629)
chr7 (267-316)||(30154833-30154882)
chr7 (130-166)||(11032497-11032533)
chr7 (97-141)||(33323293-33323337)
chr7 (98-166)||(39025954-39026022)
[»] scaffold0311 (3 HSPs)
scaffold0311 (199-318)||(12822-12942)
scaffold0311 (97-166)||(12721-12790)
scaffold0311 (223-252)||(12664-12693)
[»] chr8 (64 HSPs)
chr8 (97-166)||(44379646-44379715)
chr8 (199-318)||(3691811-3691931)
chr8 (97-166)||(4128865-4128934)
chr8 (97-166)||(20223229-20223298)
chr8 (97-166)||(30928466-30928535)
chr8 (97-166)||(42123854-42123923)
chr8 (97-166)||(3691707-3691776)
chr8 (97-166)||(7899884-7899953)
chr8 (97-166)||(23792733-23792802)
chr8 (202-318)||(2968098-2968215)
chr8 (202-318)||(10682061-10682177)
chr8 (199-318)||(7899989-7900108)
chr8 (210-307)||(44379763-44379861)
chr8 (199-315)||(4128966-4129085)
chr8 (202-318)||(17875998-17876115)
chr8 (202-318)||(35482930-35483047)
chr8 (199-319)||(20223330-20223453)
chr8 (199-316)||(30928315-30928434)
chr8 (218-320)||(30904605-30904707)
chr8 (199-317)||(42123703-42123821)
chr8 (98-166)||(10682212-10682280)
chr8 (202-318)||(14577092-14577211)
chr8 (97-161)||(17844040-17844104)
chr8 (202-318)||(27912326-27912443)
chr8 (202-318)||(27958745-27958862)
chr8 (202-318)||(30904361-30904478)
chr8 (98-166)||(30904513-30904581)
chr8 (202-319)||(13327261-13327380)
chr8 (99-166)||(27523108-27523175)
chr8 (223-318)||(23792830-23792925)
chr8 (223-319)||(44379521-44379618)
chr8 (223-319)||(30928559-30928659)
chr8 (223-318)||(3691582-3691679)
chr8 (98-163)||(13327418-13327483)
chr8 (98-166)||(17875893-17875961)
chr8 (98-166)||(34873519-34873587)
chr8 (218-318)||(35482702-35482803)
chr8 (96-166)||(13795738-13795808)
chr8 (218-320)||(17875766-17875869)
chr8 (261-318)||(20178371-20178428)
chr8 (261-318)||(20223099-20223156)
chr8 (97-166)||(38464763-38464832)
chr8 (98-166)||(2967996-2968064)
chr8 (218-305)||(2967883-2967971)
chr8 (261-316)||(17844169-17844224)
chr8 (218-305)||(27912108-27912197)
chr8 (218-305)||(27958527-27958616)
chr8 (223-318)||(42123951-42124050)
chr8 (260-316)||(13795516-13795572)
chr8 (118-166)||(14577010-14577058)
chr8 (98-166)||(27912221-27912289)
chr8 (98-166)||(27958640-27958708)
chr8 (263-318)||(19405954-19406009)
chr8 (99-166)||(35482828-35482895)
chr8 (209-248)||(38464873-38464912)
chr8 (223-305)||(4128754-4128837)
chr8 (262-320)||(33278933-33278991)
chr8 (223-252)||(7899827-7899856)
chr8 (97-166)||(9815097-9815165)
chr8 (260-318)||(13327550-13327610)
chr8 (273-317)||(1214695-1214739)
chr8 (267-315)||(17866047-17866095)
chr8 (218-246)||(31231332-31231360)
chr8 (260-320)||(40277485-40277545)
[»] chr3 (65 HSPs)
chr3 (97-166)||(3612749-3612818)
chr3 (199-315)||(3612598-3612716)
chr3 (97-166)||(44506170-44506239)
chr3 (202-320)||(49621207-49621326)
chr3 (202-318)||(8851804-8851921)
chr3 (97-164)||(48433957-48434024)
chr3 (202-320)||(37513319-37513438)
chr3 (202-316)||(11121510-11121626)
chr3 (199-318)||(44506271-44506389)
chr3 (202-320)||(22316948-22317067)
chr3 (97-166)||(23043342-23043411)
chr3 (209-318)||(25847680-25847790)
chr3 (209-318)||(49711401-49711510)
chr3 (202-318)||(9296383-9296499)
chr3 (202-316)||(22975573-22975688)
chr3 (202-318)||(28829980-28830098)
chr3 (98-166)||(22316845-22316913)
chr3 (98-166)||(22975470-22975538)
chr3 (209-315)||(36229998-36230106)
chr3 (99-166)||(17574496-17574563)
chr3 (99-166)||(44991091-44991158)
chr3 (202-305)||(48433811-48433917)
chr3 (218-305)||(55009112-55009198)
chr3 (218-320)||(28829751-28829853)
chr3 (209-316)||(55009333-55009442)
chr3 (98-166)||(8851957-8852025)
chr3 (98-166)||(9296534-9296602)
chr3 (218-318)||(22316720-22316821)
chr3 (218-318)||(22975345-22975446)
chr3 (98-166)||(28829877-28829945)
chr3 (260-320)||(33491692-33491752)
chr3 (98-166)||(37513216-37513284)
chr3 (223-315)||(44506049-44506142)
chr3 (98-166)||(49621103-49621171)
chr3 (98-166)||(49711552-49711620)
chr3 (98-166)||(49984863-49984931)
chr3 (98-166)||(55009222-55009290)
chr3 (218-318)||(17574373-17574473)
chr3 (99-166)||(35850804-35850871)
chr3 (218-320)||(36229761-36229864)
chr3 (202-315)||(49984714-49984828)
chr3 (218-318)||(25847445-25847546)
chr3 (260-320)||(51001552-51001612)
chr3 (202-249)||(23043257-23043304)
chr3 (99-166)||(34333782-34333849)
chr3 (218-318)||(23043433-23043535)
chr3 (267-317)||(49711693-49711743)
chr3 (218-296)||(49984955-49985034)
chr3 (260-318)||(52090882-52090940)
chr3 (218-305)||(8852049-8852138)
chr3 (218-317)||(48434046-48434147)
chr3 (260-316)||(10687880-10687936)
chr3 (98-166)||(25847570-25847638)
chr3 (260-320)||(35415498-35415558)
chr3 (218-319)||(35850894-35850995)
chr3 (98-166)||(36229888-36229956)
chr3 (99-166)||(1342011-1342078)
chr3 (271-318)||(5048389-5048436)
chr3 (99-166)||(11121409-11121476)
chr3 (260-303)||(45567423-45567466)
chr3 (202-236)||(17574598-17574632)
chr3 (260-318)||(31574251-31574309)
chr3 (214-248)||(45278482-45278516)
chr3 (97-166)||(43006911-43006980)
chr3 (99-164)||(45279411-45279476)
[»] chr4 (101 HSPs)
chr4 (199-318)||(30055434-30055549)
chr4 (97-166)||(2686103-2686172)
chr4 (202-316)||(21707605-21707719)
chr4 (99-166)||(30799446-30799513)
chr4 (202-318)||(52690096-52690212)
chr4 (202-320)||(23163279-23163398)
chr4 (199-317)||(30799545-30799668)
chr4 (97-166)||(25297806-25297875)
chr4 (202-318)||(13294831-13294948)
chr4 (202-318)||(49621666-49621783)
chr4 (202-318)||(33692491-33692607)
chr4 (202-319)||(5260421-5260539)
chr4 (202-317)||(46143273-46143389)
chr4 (209-315)||(33369747-33369854)
chr4 (97-166)||(55140320-55140389)
chr4 (223-320)||(2685983-2686077)
chr4 (98-166)||(21707755-21707823)
chr4 (199-315)||(25297906-25298023)
chr4 (98-166)||(28458674-28458742)
chr4 (98-166)||(33369637-33369705)
chr4 (98-166)||(33692387-33692455)
chr4 (98-166)||(41689517-41689585)
chr4 (209-318)||(42856804-42856913)
chr4 (98-166)||(55742733-55742801)
chr4 (100-166)||(3546616-3546682)
chr4 (218-305)||(5260207-5260294)
chr4 (96-166)||(22335555-22335625)
chr4 (209-315)||(50161118-50161227)
chr4 (209-318)||(3546724-3546836)
chr4 (97-166)||(30055334-30055403)
chr4 (209-318)||(37872998-37873108)
chr4 (209-320)||(9525803-9525918)
chr4 (98-166)||(20931129-20931197)
chr4 (98-166)||(21053448-21053516)
chr4 (98-166)||(48419369-48419437)
chr4 (98-166)||(50977604-50977672)
chr4 (98-166)||(52690249-52690316)
chr4 (223-318)||(25297680-25297778)
chr4 (218-320)||(26202520-26202623)
chr4 (218-320)||(33692260-33692363)
chr4 (218-320)||(37872765-37872870)
chr4 (199-252)||(2686204-2686257)
chr4 (98-166)||(5260318-5260386)
chr4 (202-318)||(20930975-20931092)
chr4 (218-318)||(23163524-23163625)
chr4 (98-166)||(23549650-23549718)
chr4 (202-316)||(28458523-28458639)
chr4 (98-166)||(42856954-42857022)
chr4 (218-318)||(48419461-48419562)
chr4 (218-318)||(49621439-49621540)
chr4 (260-320)||(52690385-52690445)
chr4 (202-318)||(55742836-55742953)
chr4 (98-165)||(26202647-26202714)
chr4 (261-315)||(9851907-9851961)
chr4 (202-304)||(23549473-23549576)
chr4 (218-320)||(28458766-28458869)
chr4 (218-316)||(50161361-50161460)
chr4 (97-166)||(563646-563715)
chr4 (202-315)||(41689620-41689734)
chr4 (218-320)||(55140196-55140298)
chr4 (218-316)||(3546490-3546590)
chr4 (98-166)||(9525961-9526029)
chr4 (98-166)||(13294728-13294796)
chr4 (209-249)||(21053368-21053408)
chr4 (260-320)||(21360455-21360515)
chr4 (98-166)||(23163432-23163500)
chr4 (223-319)||(30055207-30055306)
chr4 (260-320)||(41689387-41689447)
chr4 (223-319)||(42857051-42857148)
chr4 (98-166)||(46143424-46143491)
chr4 (267-319)||(55742620-55742672)
chr4 (260-315)||(30799295-30799350)
chr4 (111-166)||(37872901-37872956)
chr4 (99-166)||(49621565-49621632)
chr4 (98-161)||(50161274-50161337)
chr4 (260-318)||(43914688-43914746)
chr4 (218-319)||(21707847-21707949)
chr4 (218-318)||(21053540-21053641)
chr4 (271-319)||(26948252-26948300)
chr4 (98-166)||(49195723-49195791)
chr4 (267-318)||(33369509-33369560)
chr4 (260-303)||(45655708-45655751)
chr4 (261-316)||(53232099-53232154)
chr4 (202-245)||(55140426-55140469)
chr4 (260-318)||(21361440-21361498)
chr4 (105-163)||(22071811-22071869)
chr4 (202-240)||(23549577-23549615)
chr4 (261-318)||(2686273-2686330)
chr4 (97-162)||(8579069-8579134)
chr4 (97-162)||(8593925-8593990)
chr4 (218-296)||(22335457-22335535)
chr4 (97-166)||(26876536-26876605)
chr4 (223-252)||(30799388-30799417)
chr4 (98-143)||(43914586-43914631)
chr4 (261-318)||(46143559-46143616)
chr4 (202-246)||(563566-563610)
chr4 (261-297)||(2272324-2272360)
chr4 (267-303)||(23963111-23963147)
chr4 (260-320)||(45655948-45656008)
chr4 (213-249)||(48419286-48419322)
chr4 (275-303)||(50512503-50512531)
[»] chr5 (67 HSPs)
chr5 (97-166)||(132201-132270)
chr5 (97-166)||(35362070-35362139)
chr5 (199-318)||(25363241-25363361)
chr5 (199-315)||(35361922-35362038)
chr5 (209-318)||(7145774-7145884)
chr5 (199-320)||(30370509-30370631)
chr5 (97-166)||(32994299-32994368)
chr5 (202-319)||(35362983-35363101)
chr5 (202-318)||(32936206-32936323)
chr5 (202-320)||(18485657-18485776)
chr5 (218-320)||(27843021-27843124)
chr5 (97-166)||(15178942-15179011)
chr5 (199-316)||(32994164-32994279)
chr5 (199-315)||(132048-132168)
chr5 (97-163)||(25363139-25363205)
chr5 (202-320)||(40834164-40834283)
chr5 (199-304)||(15178803-15178909)
chr5 (209-315)||(3539600-3539708)
chr5 (98-166)||(13600598-13600666)
chr5 (223-319)||(19558122-19558219)
chr5 (98-166)||(20769837-20769905)
chr5 (223-320)||(25363014-25363111)
chr5 (98-166)||(40834061-40834129)
chr5 (218-320)||(30370756-30370858)
chr5 (98-166)||(2094725-2094793)
chr5 (98-166)||(3539749-3539817)
chr5 (98-166)||(35363136-35363204)
chr5 (218-318)||(3539841-3539941)
chr5 (223-318)||(15179039-15179135)
chr5 (223-318)||(35362167-35362263)
chr5 (218-320)||(32936450-32936553)
chr5 (209-318)||(2094575-2094685)
chr5 (209-318)||(13600444-13600556)
chr5 (98-166)||(7145663-7145731)
chr5 (98-166)||(18485812-18485880)
chr5 (202-316)||(20769940-20770056)
chr5 (98-166)||(30370663-30370731)
chr5 (218-318)||(40833936-40834037)
chr5 (223-318)||(13600695-13600791)
chr5 (97-164)||(42854830-42854897)
chr5 (218-320)||(20769710-20769813)
chr5 (260-318)||(32994442-32994500)
chr5 (218-318)||(35363233-35363335)
chr5 (261-318)||(32458075-32458132)
chr5 (99-166)||(14274360-14274428)
chr5 (98-166)||(32936358-32936426)
chr5 (97-140)||(27843146-27843189)
chr5 (263-318)||(37093734-37093789)
chr5 (218-320)||(2094817-2094920)
chr5 (260-318)||(12875924-12875982)
chr5 (260-320)||(7601591-7601651)
chr5 (260-316)||(17244348-17244404)
chr5 (260-320)||(24858401-24858461)
chr5 (218-305)||(18485904-18485992)
chr5 (260-318)||(2467059-2467117)
chr5 (260-318)||(7145533-7145591)
chr5 (260-318)||(20339156-20339214)
chr5 (98-164)||(27308229-27308295)
chr5 (97-151)||(29171436-29171489)
chr5 (223-252)||(132298-132327)
chr5 (275-320)||(13455945-13455990)
chr5 (98-166)||(27342808-27342877)
chr5 (223-252)||(32994396-32994425)
chr5 (260-316)||(7399758-7399814)
chr5 (260-320)||(14729702-14729762)
chr5 (276-320)||(19984534-19984578)
chr5 (98-166)||(26065758-26065826)
[»] scaffold0029 (3 HSPs)
scaffold0029 (202-318)||(136916-137033)
scaffold0029 (98-166)||(137068-137136)
scaffold0029 (218-318)||(137158-137259)
[»] scaffold0002 (3 HSPs)
scaffold0002 (202-318)||(330197-330314)
scaffold0002 (98-166)||(330349-330417)
scaffold0002 (218-318)||(330439-330540)
[»] chr2 (56 HSPs)
chr2 (202-318)||(27360350-27360467)
chr2 (202-318)||(2318719-2318835)
chr2 (202-319)||(20363969-20364087)
chr2 (202-318)||(17846236-17846353)
chr2 (202-318)||(18916853-18916970)
chr2 (99-166)||(30337550-30337617)
chr2 (97-166)||(5547232-5547301)
chr2 (202-305)||(9319815-9319919)
chr2 (223-320)||(30337422-30337520)
chr2 (199-318)||(30337649-30337774)
chr2 (98-166)||(10044870-10044938)
chr2 (98-166)||(10108939-10109007)
chr2 (98-166)||(20364123-20364191)
chr2 (98-166)||(27360246-27360314)
chr2 (98-166)||(2318617-2318685)
chr2 (218-318)||(17846008-17846109)
chr2 (98-166)||(44536336-44536404)
chr2 (201-318)||(601557-601678)
chr2 (218-318)||(8322429-8322528)
chr2 (201-251)||(5547148-5547198)
chr2 (97-166)||(8236835-8236905)
chr2 (98-166)||(4261278-4261345)
chr2 (98-166)||(9319955-9320023)
chr2 (218-318)||(9320047-9320148)
chr2 (260-320)||(10108811-10108871)
chr2 (98-166)||(17846133-17846201)
chr2 (218-318)||(18916625-18916726)
chr2 (209-318)||(4261388-4261501)
chr2 (202-249)||(10109043-10109090)
chr2 (99-166)||(31769938-31770005)
chr2 (218-305)||(2318506-2318593)
chr2 (98-160)||(40044458-40044520)
chr2 (260-320)||(10044743-10044803)
chr2 (98-166)||(18916750-18916818)
chr2 (261-315)||(5547339-5547393)
chr2 (218-320)||(20364215-20364318)
chr2 (275-320)||(1479287-1479332)
chr2 (202-295)||(8322267-8322361)
chr2 (261-318)||(27360119-27360176)
chr2 (98-143)||(37084768-37084813)
chr2 (209-249)||(10044981-10045021)
chr2 (275-315)||(22196194-22196234)
chr2 (199-247)||(43055821-43055869)
chr2 (202-238)||(44536265-44536301)
chr2 (260-303)||(29154319-29154362)
chr2 (272-318)||(21251026-21251072)
chr2 (209-247)||(40044361-40044399)
chr2 (260-317)||(3888872-3888929)
chr2 (272-317)||(5547103-5547148)
chr2 (260-317)||(33274396-33274453)
chr2 (265-318)||(37084617-37084670)
chr2 (209-246)||(37084880-37084917)
chr2 (260-319)||(601326-601386)
chr2 (98-166)||(601454-601522)
chr2 (260-320)||(3321994-3322054)
chr2 (98-150)||(43055892-43055944)
[»] scaffold0347 (3 HSPs)
scaffold0347 (199-318)||(11940-12058)
scaffold0347 (97-166)||(12090-12159)
scaffold0347 (262-318)||(12223-12279)
[»] chr6 (32 HSPs)
chr6 (202-318)||(23068696-23068813)
chr6 (202-318)||(33595548-33595665)
chr6 (202-320)||(6755145-6755264)
chr6 (202-318)||(4243151-4243268)
chr6 (202-317)||(3218152-3218268)
chr6 (98-166)||(3218294-3218362)
chr6 (98-166)||(4243048-4243116)
chr6 (98-166)||(6755042-6755110)
chr6 (97-166)||(10810129-10810198)
chr6 (202-318)||(14763534-14763653)
chr6 (260-316)||(20491530-20491586)
chr6 (98-166)||(33595444-33595512)
chr6 (218-318)||(23068942-23069041)
chr6 (218-320)||(3922783-3922886)
chr6 (202-252)||(10810044-10810094)
chr6 (218-318)||(3218385-3218486)
chr6 (218-317)||(33595320-33595420)
chr6 (98-166)||(14763443-14763511)
chr6 (202-318)||(3922539-3922656)
chr6 (260-320)||(10026138-10026198)
chr6 (261-318)||(10027124-10027181)
chr6 (98-166)||(20491645-20491713)
chr6 (98-166)||(23068850-23068918)
chr6 (99-166)||(3922691-3922758)
chr6 (260-303)||(13178479-13178522)
chr6 (218-317)||(14763319-14763419)
chr6 (260-303)||(20028029-20028072)
chr6 (271-317)||(5352541-5352587)
chr6 (260-318)||(13853142-13853200)
chr6 (275-320)||(7920483-7920528)
chr6 (275-319)||(3011911-3011955)
chr6 (260-320)||(28852186-28852246)
[»] scaffold1577 (2 HSPs)
scaffold1577 (202-252)||(940-990)
scaffold1577 (97-166)||(1025-1094)
[»] scaffold0053 (2 HSPs)
scaffold0053 (202-246)||(15112-15156)
scaffold0053 (261-295)||(15060-15094)


Alignment Details
Target: chr1 (Bit Score: 74; Significance: 6e-34; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 199 - 320
Target Start/End: Complemental strand, 19897296 - 19897174
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaaga 297  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||        |||||| ||||||||||||||||||||||||||||||     
T  19897296 cataaaaaggataactatgttgttattttttaacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaagg 19897197  T
Q  298 gactaattatataattttgccaa 320  Q
    |||||||| ||||||||||||||    
T  19897196 gactaattgtataattttgccaa 19897174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 199 - 318
Target Start/End: Original strand, 12115177 - 12115297
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaaga 297  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||        |||||| ||||||||||||||||||||||||||||||     
T  12115177 cataaaaaggataactatgttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaagg 12115276  T
Q  298 gactaattatataattttgcc 318  Q
    |||||||| | ||||||||||    
T  12115277 gactaattgtgtaattttgcc 12115297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 199 - 318
Target Start/End: Original strand, 4969590 - 4969710
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaaga 297  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||        |||||| ||| ||||||||| ||||||||||||||||     
T  4969590 cataaaaaggataactatgttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacaaaaatgttatctaaaattaagttaagt 4969689  T
Q  298 gactaattatataattttgcc 318  Q
    |||||||| | ||||||||||    
T  4969690 gactaattgtgtaattttgcc 4969710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 200 - 318
Target Start/End: Original strand, 40290006 - 40290127
Alignment:
Q  200 ataaaaagtataactatgttgttattttataacataaaggactaaatcgttac---nnnnnnngataaaagacgaaaatgttacctaaaattaagttaag 296  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||||          ||| || ||||||||||||||||||||||||||||||    
T  40290006 ataaaaaggataactatgttgttattttataacataaaagactaaatcgttacaaaaaaaaaagattaaggacgaaaatgttacctaaaattaagttaag 40290105  T
Q  297 agactaattatataattttgcc 318  Q
     |||||||||| ||||||||||    
T  40290106 ggactaattatgtaattttgcc 40290127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 202 - 320
Target Start/End: Complemental strand, 40902444 - 40902325
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||    
T  40902444 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaacaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 40902345  T
Q  301 taattatataattttgccaa 320  Q
    ||||| | ||||||||||||    
T  40902344 taattgtgtaattttgccaa 40902325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 12115077 - 12115146
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||    
T  12115077 attttttcaatgaaatttgattttctaggctagtatgatgaagatttgcatttgtctatgagcttgatga 12115146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 315
Target Start/End: Complemental strand, 17985404 - 17985290
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| ||||||||||||    
T  17985404 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagagac 17985305  T
Q  301 taattatataatttt 315  Q
    ||||| | |||||||    
T  17985304 taattgtgtaatttt 17985290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 4969489 - 4969555
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttga 163  Q
    |||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||    
T  4969489 attttttcaatgaaatttgattttcttgactagtatgatgaagatttgcgtttgtctatgagtttga 4969555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 318
Target Start/End: Complemental strand, 17611542 - 17611425
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||||||| |||||| |||||| |||||||| |||    
T  17611542 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacagaaaaaagataaaggacgaaagtgttacataaaataaagttaagggac 17611443  T
Q  301 taattatataattttgcc 318  Q
    ||||| | ||||||||||    
T  17611442 taattgtgtaattttgcc 17611425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 320
Target Start/End: Original strand, 2026948 - 2027067
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| |||||||||||||||||||||||||||||||||||||| || ||        |||||| ||||||| |||||| |||||| |||||||| |||    
T  2026948 aaaaaggataactatgttgttattttataacataaaggactaaattgtgacaaagaaaagataaaggacgaaagtgttacataaaataaagttaagggac 2027047  T
Q  301 taattatataattttgccaa 320  Q
    ||||| | ||||||||||||    
T  2027048 taattgtgtaattttgccaa 2027067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 19897399 - 19897330
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||| ||||||||||||||||||||| |||||||||| |||||||| |||||||||||| |||||||    
T  19897399 atttttttaatgaaatttgattttctaggctagtatgatgtagatttgcatttgtctatgagcttgatga 19897330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 320
Target Start/End: Original strand, 12139252 - 12139372
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnn--gataaaagacgaaaatgttacctaaaattaagttaagaga 299  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||||| ||         |||||| ||||||| ||||||||||||| |||||||| ||    
T  12139252 aaaaaggataactatgatgttattttataacatagaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaggga 12139351  T
Q  300 ctaattatataattttgccaa 320  Q
    |||||| | ||||||||||||    
T  12139352 ctaattgtgtaattttgccaa 12139372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 30562908 - 30562976
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||| |||||| |||||||||||||||    
T  30562908 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 30562976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 98 - 164
Target Start/End: Complemental strand, 30002430 - 30002364
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgat 164  Q
    |||||| || |||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||    
T  30002430 tttttttaaagaaatttgattttctaggtttgtatgatgaagatttacgtttgcctatgagtttgat 30002364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 218 - 305
Target Start/End: Original strand, 30002454 - 30002541
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaatt 305  Q
    |||| ||||||||||||||||||||||||||| ||       |||||| ||||||||||||||||||||| |||||||| ||||||||    
T  30002454 ttgtcattttataacataaaggactaaatcgtgacaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaatt 30002541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 318
Target Start/End: Complemental strand, 7113983 - 7113865
Alignment:
Q  201 taaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagaga 299  Q
    ||||||| |||||||||||||| |||||||| ||||||||||||||||| ||         ||||| ||||||| ||||||||||||| |||||||| ||    
T  7113983 taaaaaggataactatgttgttgttttataatataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaaggga 7113884  T
Q  300 ctaattatataattttgcc 318  Q
    |||||| | ||||||||||    
T  7113883 ctaattgtgtaattttgcc 7113865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 315
Target Start/End: Complemental strand, 30002328 - 30002214
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||| ||| |||||| |||||| |||||||| |||    
T  30002328 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacataaaataaagttaagggac 30002229  T
Q  301 taattatataatttt 315  Q
    ||||| | |||||||    
T  30002228 taattgtgtaatttt 30002214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 2026846 - 2026914
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | |||||| |||||||| |||||| |||||||||||||||    
T  2026846 ttttttcaaagaaatttgattttctaggcttgtatgaagaagatttacgtttgcctatgagtttgatga 2026914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 12139149 - 12139217
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| ||||||| |||||||||| | ||||||||||||||||||||||  ||||||||||||||    
T  12139149 ttttttcaaagaaatttaattttctaggcttgtatgatgaagatttgcgtttgcatatgagtttgatga 12139217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 17611645 - 17611577
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| ||||||| |||||||||| | ||||||||||||||| |||||| |||||||||||||||    
T  17611645 ttttttcaaagaaatttaattttctaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 17611577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 320
Target Start/End: Complemental strand, 4969461 - 4969362
Alignment:
Q  223 attttataacataaaggactaaatcgttacnnnnnnn--gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    |||| |||||||||||||||||||||||||         |||||| ||||||| |||||||||||||||||||||  ||||| |||||||||||||||||    
T  4969461 atttaataacataaaggactaaatcgttacaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaaaggactatttatataattttgccaa 4969362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 318
Target Start/End: Original strand, 17611674 - 17611770
Alignment:
Q  223 attttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||||||||| ||||||||||    
T  17611674 attttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattatgtaattttgcc 17611770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 30563011 - 30563129
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac--nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagaga 299  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||| ||         ||||||  |||||| ||||||||||||| |||||||| ||    
T  30563011 aaaaaggaaaactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaagaacgaaagtgttacctaaaataaagttaaggga 30563110  T
Q  300 ctaattatataattttgcc 318  Q
    |||||  | ||||||||||    
T  30563111 ctaatcgtgtaattttgcc 30563129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 40902546 - 40902480
Alignment:
Q  100 ttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||| |||||||||||||||| | | ||||||||||||||| |||||| |||||||||||||||    
T  40902546 ttttcaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatgagtttgatga 40902480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 316
Target Start/End: Complemental strand, 12115050 - 12114954
Alignment:
Q  223 attttataacataaaggactaaatcgttacnnnnnnn---gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||||||||||||||||| |||||||||||          |||||| || ||||||||||||||||||||||||||| |||||||||| ||||||||    
T  12115050 attttataacataaaggattaaatcgttacaaaaaaaaaagataaaggatgaaaatgttacctaaaattaagttaagggactaattatgtaattttg 12114954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 17985510 - 17985441
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||| |||||||||||||||| | | ||||||||||||||| || ||| |||||||||||||||    
T  17985510 attttttcaaagaaatttgattttctatgcttgtatgatgaagatttacgattgcctatgagtttgatga 17985441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 1549452 - 1549520
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||| || |||||||||||||||||| | ||||||||||||||| |||||| |||||| ||||||||    
T  1549452 tttttttaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgaatttgatga 1549520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 2026822 - 2026721
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||||||| | ||||||||    
T  2026822 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 2026723  T
Q  317 cc 318  Q
    ||    
T  2026722 cc 2026721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 7114084 - 7114016
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||  |||||||||||| |||| | ||||||||||||||| |||||| |||||||||||||||    
T  7114084 ttttttcaaataaatttgattttttaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 7114016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 9172201 - 9172152
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcg 248  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  9172201 cataaaaaggataactatgttgtcattttataatataaaggactaaatcg 9172152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 9180183 - 9180134
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcg 248  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  9180183 cataaaaaggataactatgttgtcattttataatataaaggactaaatcg 9180134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 1549428 - 1549327
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||||||| | | ||||||    
T  1549428 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgttattttg 1549329  T
Q  317 cc 318  Q
    ||    
T  1549328 cc 1549327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 25779999 - 25779959
Alignment:
Q  209 ataactatgttgttattttataacataaaggactaaatcgt 249  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  25779999 ataactatgttgttattttataacataaagaactaaatcgt 25779959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 30306904 - 30306972
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||||||| ||| | |||| |  |||||||| ||||||||||| ||||||||||||||    
T  30306904 ttttttcaatgaaatttgagtttattggtttgcgtgatgaagctttgcgtttgtttatgagtttgatga 30306972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 25780110 - 25780043
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatg 165  Q
    ||||||||| |||||||||||||||| | | ||||||||||||||| ||||||  ||||| |||||||    
T  25780110 ttttttcaaagaaatttgattttctaagcttgtatgatgaagatttacgtttgcatatgaatttgatg 25780043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 30562884 - 30562784
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgc 317  Q
    |||| |||||||||||||||| || ||||||| ||       |||||| ||||||| ||||||||||||| |||||||| |||||||| | | |||||||    
T  30562884 ttgtcattttataacataaagaaccaaatcgtgacaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgttattttgc 30562785  T
Q  318 c 318  Q
    |    
T  30562784 c 30562784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 318
Target Start/End: Original strand, 33128420 - 33128467
Alignment:
Q  271 aaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    |||||||||||||||||||||||||||||| |||| ||| ||||||||    
T  33128420 aaaatgttacctaaaattaagttaagagacaaattgtatgattttgcc 33128467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 19897466 - 19897524
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    |||||| ||||||| |||||||||| ||||||||||| | |||||||| ||||||||||    
T  19897466 gataaaggacgaaagtgttacctaagattaagttaaggggctaattatgtaattttgcc 19897524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 25267239 - 25267181
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    |||||| ||||||| ||||| |||||||||| ||||| || ||||||||||||||||||    
T  25267239 gataaaggacgaaagtgttatctaaaattaaattaagggattaattatataattttgcc 25267181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 17985575 - 17985620
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaatt 305  Q
    |||||| ||||||||||||||||||||| |||||||| ||||||||    
T  17985575 gataaaggacgaaaatgttacctaaaataaagttaagggactaatt 17985620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 315
Target Start/End: Original strand, 25780134 - 25780231
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattatataatttt 315  Q
    |||| ||||||||||||||| ||||||||| | ||        ||||| ||||||| ||||||||||||| |||||||| |||||||| | |||||||    
T  25780134 ttgtcattttataacataaatgactaaatcatgacaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 25780231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 49564467 - 49564404
Alignment:
Q  102 ttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||  |||||| ||| |||||||||||||||| |||| | ||||||||||||||    
T  49564467 ttcaatgaaatttgggtttctatgtttgtatgatgaagatttgggttt-tttatgagtttgatga 49564404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 9877659 - 9877718
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcca 319  Q
    |||||| ||| ||| |||||||| ||||||||||||| ||||||  ||||||||||||||    
T  9877659 gataaaggaccaaattgttacctgaaattaagttaagggactaaaaatataattttgcca 9877718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 25267387 - 25267422
Alignment:
Q  212 actatgttgttattttataacataaaggactaaatc 247  Q
    ||||||||||||||||||||||||||||| ||||||    
T  25267387 actatgttgttattttataacataaaggattaaatc 25267422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 49564243 - 49564185
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    |||||| ||| ||| |||||||| ||||||||||||||||| |||| | ||||||||||    
T  49564243 gataaaggacaaaagtgttacctgaaattaagttaagagacgaattgtgtaattttgcc 49564185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 4e-32; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 199 - 318
Target Start/End: Original strand, 31894481 - 31894600
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagag 298  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||        ||||| ||||||||||||| |||||||||||||||| |    
T  31894481 cataaaaaggataactatgttgttattttataacataaaggactaaatcgttacaaaaaaaaataaaggacgaaaatgttatctaaaattaagttaaggg 31894580  T
Q  299 actaattatataattttgcc 318  Q
    ||||||| | ||||||||||    
T  31894581 actaattgtgtaattttgcc 31894600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 199 - 320
Target Start/End: Complemental strand, 1511309 - 1511188
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagag 298  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||        ||||| ||||||||| |||||||||||||||||||| |    
T  1511309 cataaaaaggataattatgttgttattttataacataaaggactaaatcgttacaaaaaaaaataaaggacgaaaatattacctaaaattaagttaaggg 1511210  T
Q  299 actaattatataattttgccaa 320  Q
    ||||||| | ||||||||||||    
T  1511209 actaattgtgtaattttgccaa 1511188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 1511408 - 1511339
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1511408 attttttcaatgaaatttgattttctaggttagtatgatgaagatttacgtttgtctatgagtttgatga 1511339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 28408470 - 28408586
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagact 301  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||       |||||| ||||||| ||||||||||||| |||||||| ||||    
T  28408470 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggact 28408569  T
Q  302 aattatataattttgcc 318  Q
    |||| | ||||||||||    
T  28408570 aattgtgtaattttgcc 28408586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 44307741 - 44307810
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  44307741 attttttcaatgaaatttgattttctaggctagtatgatgaagatttacgtttgtctatgagtttgatga 44307810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 7417741 - 7417857
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagact 301  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||| ||       |||||| ||||||| ||||||||||||| |||||||| ||||    
T  7417741 aaaaaggataactatgttgttattttataacaaaaaggactaaatcgtgacaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggact 7417840  T
Q  302 aattatataattttgcc 318  Q
    |||| | ||||||||||    
T  7417841 aattgtgtaattttgcc 7417857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 32523431 - 32523546
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||    
T  32523431 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaataaaagataaaggacgaaagtgttacctaaaataaagttaagggac 32523530  T
Q  301 taattatataattttg 316  Q
    ||||| | ||||||||    
T  32523531 taattgtgtaattttg 32523546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 10878751 - 10878819
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||    
T  10878751 attttttcaatgaaatttgattt-ctaggctagtatgatgacgatttgcgtttgtctatgagtttgatga 10878819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 32177980 - 32178048
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||    
T  32177980 ttttttcaaagaaatttgattttctaggtttgtatgatgaagatttacgtttgcctatgagtttgatga 32178048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 45746944 - 45746876
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||    
T  45746944 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttgcgtttgcctatgagtttgatga 45746876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 199 - 319
Target Start/End: Original strand, 44307842 - 44307965
Alignment:
Q  199 cataaaaagtataactatgttgttattttataac--ataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaa 295  Q
    ||||||||| ||||||||||||||||||||||||  |||||||||||||| |||||        ||||||  ||||||||||||||||||||||||||||    
T  44307842 cataaaaaggataactatgttgttattttataacatataaaggactaaattgttacaaaaaaaagataaagaacgaaaatgttacctaaaattaagttaa 44307941  T
Q  296 gagactaattatataattttgcca 319  Q
    | || ||||| | |||||||||||    
T  44307942 gggattaattgtgtaattttgcca 44307965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 318
Target Start/End: Original strand, 1511437 - 1511532
Alignment:
Q  223 attttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||||||||||||||||||||||||||||       |||||| ||||||| ||||||||||| |||||||||| |||||||| | ||||||||||    
T  1511437 attttataacataaaggactaaatcgttacaaaaaaagataaaggacgaaagtgttacctaaatttaagttaagggactaattgtgtaattttgcc 1511532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 315
Target Start/End: Original strand, 32178083 - 32178197
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||| ||| ||||||||||||| |||||||| |||    
T  32178083 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaagaaagataaaggacaaaagtgttacctaaaataaagttaagggac 32178182  T
Q  301 taattatataatttt 315  Q
    ||||| | |||||||    
T  32178183 taattgtgtaatttt 32178197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 318
Target Start/End: Complemental strand, 8437422 - 8437305
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| | ||        |||||| ||||||| |||||| |||||| |||||||| |||    
T  8437422 aaaaaggataactatgttgttattttataacataaaggactaaatcatgacagaaaaaagataaaggacgaaagtgttacataaaataaagttaagggac 8437323  T
Q  301 taattatataattttgcc 318  Q
    ||||| | ||||||||||    
T  8437322 taattgtgtaattttgcc 8437305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 32523326 - 32523394
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||| |||||| |||||||||||||||    
T  32523326 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 32523394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 31894381 - 31894448
Alignment:
Q  99 tttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||||||||| ||||| | |  ||||||||||||||||||||||||||||||||||||||||    
T  31894381 tttttcaatgaaatttaattttattgactagtatgatgaagatttgcgtttgtctatgagtttgatga 31894448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 318
Target Start/End: Complemental strand, 19305860 - 19305740
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac----nnnnnnngataaaagacgaaaatgttacctaaaattaagttaaga 297  Q
    |||||| |||||||||||||||||||||||||||||||||||||| || ||           |||||| ||||||| ||||||||||||| ||||||||     
T  19305860 aaaaaggataactatgttgttattttataacataaaggactaaattgtgacaaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 19305761  T
Q  298 gactaattatataattttgcc 318  Q
    |||||||| | ||||||||||    
T  19305760 gactaattgtgtaattttgcc 19305740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 49114090 - 49114208
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac--nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagaga 299  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||||| ||         |||||| ||||||| ||||||||||||| |||||||| ||    
T  49114090 aaaaaggataactatgttgttattttataacacagaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaggga 49114189  T
Q  300 ctaattatataattttgcc 318  Q
    |||||| | ||||||||||    
T  49114190 ctaattgtgtaattttgcc 49114208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 7417637 - 7417705
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||| || |||||||||||||||||  | |||||||||||||||||||||| |||||||||||||||    
T  7417637 tttttttaaagaaatttgattttctagacttgtatgatgaagatttgcgtttgcctatgagtttgatga 7417705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 8437525 - 8437457
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| ||||||| |||||||||| | ||||||||||||||| |||||| |||||||||||||||    
T  8437525 ttttttcaaagaaatttaattttctaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 8437457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 318
Target Start/End: Complemental strand, 10878723 - 10878625
Alignment:
Q  223 attttataacataaaggactaaatcgttacnnnnnnn---gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||||||||||||||||||||||||||||          |||||| ||||||| |||||||||||||||||||||| |||||||| | ||||||||||    
T  10878723 attttataacataaaggactaaatcgttacaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 10878625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 29226394 - 29226457
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagttt 161  Q
    ||||||||||||||||||||||||||   | |||| ||||||||||||||||||||||||||||    
T  29226394 ttttttcaatgaaatttgattttctaaaattgtataatgaagatttgcgtttgtctatgagttt 29226457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 318
Target Start/End: Complemental strand, 31894352 - 31894258
Alignment:
Q  223 attttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||||||||||||||||||||||||||||        ||||| ||||||| |||||||||||||||||||||| ||||| || | ||||||||||    
T  31894352 attttataacataaaggactaaatcgttacaaaaaaa-ataaaggacgaaagtgttacctaaaattaagttaagggactatttgtgtaattttgcc 31894258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 318
Target Start/End: Original strand, 8437554 - 8437651
Alignment:
Q  223 attttataacataaaggactaaatcgttacnnnnnnn--gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||||||||||||||||||||||||| ||         |||||| ||||||| ||||||||||||| |||||||| |||||||||| ||||||||||    
T  8437554 attttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattatgtaattttgcc 8437651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 252
Target Start/End: Original strand, 10878852 - 10878905
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttac 252  Q
    ||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||    
T  10878852 cataaaaaggataacaatgttgttattttataacataaatgactaaatcgttac 10878905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 204 - 249
Target Start/End: Complemental strand, 24986833 - 24986788
Alignment:
Q  204 aaagtataactatgttgttattttataacataaaggactaaatcgt 249  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  24986833 aaaggataactatgttgttattttataacataaaggactaaatcgt 24986788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 202 - 315
Target Start/End: Original strand, 32832462 - 32832576
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgtta-cnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||| |         |||||| ||||||| ||||||||||||| || ||||| |||    
T  32832462 aaaaaggataactatattgttattttataacataaaggactaaatcgtgataaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagggac 32832561  T
Q  301 taattatataatttt 315  Q
    ||||| | |||||||    
T  32832562 taattgtgtaatttt 32832576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 8869793 - 8869729
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagttt 161  Q
    |||||||||||||||||||| ||||| | || |||||||||||||||| |||||| |||||||||    
T  8869793 attttttcaatgaaatttgagtttcttgatttgtatgatgaagatttgggtttgtttatgagttt 8869729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 19305964 - 19305896
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||| | | |||||||||||||||  ||||| |||||||||||||||    
T  19305964 ttttttcaaagaaatttgattttctatgcttgtatgatgaagatttatgtttgcctatgagtttgatga 19305896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 32177956 - 32177855
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||||||||||||||||| |||||||  |||||||| | ||||||||    
T  32177956 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaaaggactaattgtgtaattttg 32177857  T
Q  317 cc 318  Q
    ||    
T  32177856 cc 32177855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 37453188 - 37453148
Alignment:
Q  209 ataactatgttgttattttataacataaaggactaaatcgt 249  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  37453188 ataactatgttgttattttataacataaaggactaaatcgt 37453148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 319
Target Start/End: Complemental strand, 7417613 - 7417510
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn--gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataatttt 315  Q
    |||| ||||||||||||||||||||||||||| ||         |||||| ||||||||||||||||||||| |||||||| || ||||| | |||||||    
T  7417613 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggattaattgtgtaatttt 7417514  T
Q  316 gcca 319  Q
    ||||    
T  7417513 gcca 7417510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 315
Target Start/End: Complemental strand, 2933391 - 2933289
Alignment:
Q  214 tatgttgttattttataacataaaggactaaatcgtta-cnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattatataat 312  Q
    |||||||||||||||||||||||||||||||||||| |         |||||| || |||| ||||||||||||| |||||||| |||||||| | ||||    
T  2933391 tatgttgttattttataacataaaggactaaatcgtgataaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagggactaattgtgtaat 2933292  T
Q  313 ttt 315  Q
    |||    
T  2933291 ttt 2933289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 30060523 - 30060474
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcg 248  Q
    ||||||||| || ||||||||| |||||||||||||||||||||||||||    
T  30060523 cataaaaaggatgactatgttgatattttataacataaaggactaaatcg 30060474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 30060625 - 30060556
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||||  ||||||||  ||| |||||||||||||||| |||||  ||||||||||||||    
T  30060625 attttttcaatgaaatcggattttctttgtttgtatgatgaagatttgggtttgcttatgagtttgatga 30060556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 315
Target Start/End: Complemental strand, 32523302 - 32523204
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataatttt 315  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||||||| ||| |||||    
T  32523302 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtattatttt 32523204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 37453287 - 37453219
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtcta-tgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||| |||||| ||| ||||||||||||    
T  37453287 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttg-ctattgagtttgatga 37453219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 44307668 - 44307611
Alignment:
Q  261 ataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||| ||||||| |||||||||||||||||||||| |||||||| | ||||||||||    
T  44307668 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 44307611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 28408367 - 28408435
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| ||||||||||||| || |   ||||||||||||||| |||||| |||||||||||||||    
T  28408367 ttttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgcctatgagtttgatga 28408435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 49113963 - 49113862
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||  |||||||| | ||||||||    
T  49113963 ttgtcattttataacataaaggactaaatcgtaacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaaggactaattgtgtaattttg 49113864  T
Q  317 cc 318  Q
    ||    
T  49113863 cc 49113862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 49113987 - 49114054
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||| ||| | ||||||||||||||| || ||| |||||||||||||||    
T  49113987 ttttttcaaagaaatttgattttccaggcttgtatgatgaagatttacg-ttgcctatgagtttgatga 49114054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 249
Target Start/End: Complemental strand, 45746841 - 45746794
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgt 249  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  45746841 aaaaaggataactatgttgttattttataacatagaggattaaatcgt 45746794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 45747011 - 45747069
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    |||||| ||||||| ||||||||||||| || |||||| ||||||| ||||||||||||    
T  45747011 gataaaggacgaaagtgttacctaaaataaaattaagaaactaattgtataattttgcc 45747069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 8900205 - 8900274
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||| || ||||||||  |||||| ||| |||||||||| ||||| |||||| ||||||||||||||    
T  8900205 atttttttaaagaaatttgggtttctatgtttgtatgatgaaaatttgagtttgtttatgagtttgatga 8900274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 32072202 - 32072262
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    |||||| ||||||| ||||||| |||||||||||||| || ||||  ||||||||||||||    
T  32072202 gataaaggacgaaattgttaccaaaaattaagttaagggattaatattataattttgccaa 32072262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 32832360 - 32832428
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||| | | |||||||||| |||| |||||  || ||||||||||||    
T  32832360 ttttttcaaagaaatttgattttctatgcttgtatgatgaaaatttacgtttacctgtgagtttgatga 32832428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 8871333 - 8871396
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagttt 161  Q
    |||||||||||||| |||| ||||| | || |||||||||| ||||| |||||| |||||||||    
T  8871333 ttttttcaatgaaaattgagtttcttgatttgtatgatgaaaatttgggtttgtttatgagttt 8871396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 21733126 - 21733067
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcca 319  Q
    |||||||||| ||| |||||||| ||||||||||||| |||||||  | |||||||||||    
T  21733126 gataaaagaccaaactgttacctgaaattaagttaagggactaatagtgtaattttgcca 21733067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 303
Target Start/End: Complemental strand, 23036705 - 23036662
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaa 303  Q
    |||||||||| ||| |||||||||||||||||||||| ||||||    
T  23036705 gataaaagactaaactgttacctaaaattaagttaagggactaa 23036662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 21733324 - 21733366
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagacta 302  Q
    |||||| ||||||| |||||||| |||||||||||||||||||    
T  21733324 gataaaggacgaaattgttacctgaaattaagttaagagacta 21733366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 28408343 - 28408244
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||| | ||        |||||| ||||||| ||||||||||||| |||||||| | |||||| | ||||||||    
T  28408343 ttgtcattttataacataaaggactaaatcatgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaggggctaattgtgtaattttg 28408244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 320
Target Start/End: Complemental strand, 32832335 - 32832232
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| |||||||||||||||||||||||| || ||        |||||||||  ||| ||||||||||||| || ||||| |||||||| ||| ||||||    
T  32832335 ttgtcattttataacataaaggactaaattgtgacaaaaaaaagataaaagataaaagtgttacctaaaataaaattaagggactaattgtattattttg 32832236  T
Q  317 ccaa 320  Q
    ||||    
T  32832235 ccaa 32832232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 37453311 - 37453410
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||| ||| ||        |||||| ||||||| ||||||||||||| |||||||| |||| ||| | ||||||||    
T  37453311 ttgtcattttataacataaaggactaaaccgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactgattgtgtaattttg 37453410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 8114857 - 8114788
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||||| |  ||| ||  || ||| |||||||||||| |||||| ||||||||||||||    
T  8114857 attttttcaatgaaattcgggtttttatttttgtaagatgaagatttgggtttgtttatgagtttgatga 8114788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 316
Target Start/End: Complemental strand, 8869629 - 8869584
Alignment:
Q  271 aaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||||||||||||||||||||||||| ||| |||| | ||||||||    
T  8869629 aaaatgttacctaaaattaagttaagggacgaattgtgtaattttg 8869584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 316
Target Start/End: Original strand, 30154833 - 30154882
Alignment:
Q  267 gacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    ||||||||||||  | |||||||||||||| || ||||||||||||||||    
T  30154833 gacgaaaatgttgtccaaaattaagttaagggattaattatataattttg 30154882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 166
Target Start/End: Complemental strand, 11032533 - 11032497
Alignment:
Q  130 tatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  11032533 tatgatgaagatttgggtttgtttatgagtttgatga 11032497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 33323337 - 33323293
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagat 141  Q
    |||||||||||||||| ||| |||||| ||| |||||||||||||    
T  33323337 attttttcaatgaaatctgagtttctatgtttgtatgatgaagat 33323293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 39026022 - 39025954
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||||||| |||||| ||| ||| |  |||||||||  ||||| ||||| ||||||||    
T  39026022 ttttttcaatgaaatttgagtttctatgtttgtacggcgaagatttgaatttgtttatgactttgatga 39025954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 199 - 318
Target Start/End: Original strand, 12822 - 12942
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaaga 297  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||        |||||| ||||||||||||| ||||||||||||||||     
T  12822 cataaaaaggataactatgttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttatctaaaattaagttaagg 12921  T
Q  298 gactaattatataattttgcc 318  Q
    |||||||| | ||||||||||    
T  12922 gactaattgtgtaattttgcc 12942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 12721 - 12790
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||    
T  12721 attttttcaatgaaatttgattttcttgactagtatgatgaagatttgcgtttgtctatgagtttgatga 12790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 12693 - 12664
Alignment:
Q  223 attttataacataaaggactaaatcgttac 252  Q
    ||||||||||||||||||||||||||||||    
T  12693 attttataacataaaggactaaatcgttac 12664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 44379646 - 44379715
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  44379646 attttttcaatgaaatttgattttctaggctagtatgatgaagatttgcgtttgtctatgagtttgatga 44379715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 199 - 318
Target Start/End: Original strand, 3691811 - 3691931
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaaga 297  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||        |||||| |||||||||||||||||||||||||| |||     
T  3691811 cataaaaaggataactatgttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagtgaagg 3691910  T
Q  298 gactaattatataattttgcc 318  Q
    || ||||| | ||||||||||    
T  3691911 gattaattgtgtaattttgcc 3691931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 4128865 - 4128934
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  4128865 attttttcaatgaaatttgattttctagactagtatgatgaagatttgcgtttgtctatgagtttgatga 4128934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 20223229 - 20223298
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  20223229 attttttcaatgaaatttgattttctaggctagtatgatgaagatttacgtttgtctatgagtttgatga 20223298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 30928535 - 30928466
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  30928535 attttttcaatgaaatttgattttctaggctggtatgatgaagatttgcgtttgtctatgagtttgatga 30928466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 42123923 - 42123854
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  42123923 attttttcaatgaaatttgattttctaggctagtatgatgaaggtttgcgtttgtctatgagtttgatga 42123854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 3691707 - 3691776
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  3691707 attttttcaatgaaatttaattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatga 3691776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 7899884 - 7899953
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  7899884 attttttcaataaaatttgattttctaggctagtatgatgacgatttgcgtttgtctatgagtttgatga 7899953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 23792802 - 23792733
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||    
T  23792802 attttttcaatgaaatttgattttcttggctagtatgatgaagatttgcgtttgtctacgagtttgatga 23792733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 2968098 - 2968215
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||    
T  2968098 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 2968197  T
Q  301 taattatataattttgcc 318  Q
    ||||| | ||||||||||    
T  2968198 taattgtgtaattttgcc 2968215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 318
Target Start/End: Complemental strand, 10682177 - 10682061
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagact 301  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||       ||||||  |||||| ||||||||||||| |||||||| || |    
T  10682177 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgactaaaaaagataaagaacgaaagtgttacctaaaataaagttaagggatt 10682078  T
Q  302 aattatataattttgcc 318  Q
    |||| | ||||||||||    
T  10682077 aattgtgtaattttgcc 10682061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 199 - 318
Target Start/End: Original strand, 7899989 - 7900108
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagag 298  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||        ||||| |||||||||||||  ||||||||| |||||      
T  7899989 cataaaaaggataacaatgttgttattttataacataaaggactaaatcgttacaaaaaaatataaaggacgaaaatgttagataaaattaaattaagga 7900088  T
Q  299 actaattatataattttgcc 318  Q
    ||||||| | ||||||||||    
T  7900089 actaattctgtaattttgcc 7900108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 210 - 307
Target Start/End: Original strand, 44379763 - 44379861
Alignment:
Q  210 taactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattat 307  Q
    |||||||||||||||||||||||||||||||||||||||||||        ||||||  |||||||||||||||||||||||||||||  |||||||||    
T  44379763 taactatgttgttattttataacataaaggactaaatcgttacaaaaaaaagataaagaacgaaaatgttacctaaaattaagttaaggaactaattat 44379861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 199 - 315
Target Start/End: Original strand, 4128966 - 4129085
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaatta---agttaa 295  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||       |||||| ||| ||||||||| |||||||||   ||||||    
T  4128966 cataaaaaggataactatgttgttattttataacataaaggcctaaatcgttacaaaaaaagataaaggacaaaaatgttatctaaaattaattagttaa 4129065  T
Q  296 gagactaattatataatttt 315  Q
    | |||||||| | |||||||    
T  4129066 gggactaattgtgtaatttt 4129085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 17875998 - 17876115
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||    
T  17875998 aaaaaggataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 17876097  T
Q  301 taattatataattttgcc 318  Q
    ||||| | ||||||||||    
T  17876098 taattgtgtaattttgcc 17876115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 35482930 - 35483047
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| |||||||||||||||||||||||||||||||||||||| || ||        |||||| ||||||| ||||||||||||| |||||||| |||    
T  35482930 aaaaaggataactatgttgttattttataacataaaggactaaattgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 35483029  T
Q  301 taattatataattttgcc 318  Q
    ||||| | ||||||||||    
T  35483030 taattgtgtaattttgcc 35483047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 199 - 319
Target Start/End: Original strand, 20223330 - 20223453
Alignment:
Q  199 cataaaaagtataactatgttgttattttataac--ataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaa 295  Q
    ||||||||| ||||||||||||||||||||||||  |||||||||||||| |||||        ||||||  ||||||||||||||||||||||||||||    
T  20223330 cataaaaaggataactatgttgttattttataacatataaaggactaaattgttacaaaaaaaagataaagaacgaaaatgttacctaaaattaagttaa 20223429  T
Q  296 gagactaattatataattttgcca 319  Q
    | || ||||| | |||||||||||    
T  20223430 gggattaattgtgtaattttgcca 20223453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 199 - 316
Target Start/End: Complemental strand, 30928434 - 30928315
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttac--nnnnnnngataaaagacgaaaatgttacctaaaattaagttaag 296  Q
    ||||||||| |||||||||||| |||||||||||||||||||| ||||||||||          ||||| ||| ||||||||||||||||||||||||||    
T  30928434 cataaaaaggataactatgttggtattttataacataaaggacaaaatcgttacaaaaaaaataataaaggacaaaaatgttacctaaaattaagttaag 30928335  T
Q  297 agactaattatataattttg 316  Q
     |||||||| | ||||||||    
T  30928334 ggactaattgtgtaattttg 30928315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 320
Target Start/End: Original strand, 30904605 - 30904707
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgc 317  Q
    |||| ||||||||||||||||||||||||||| ||       |||||| ||||||| ||||||||||||| |||||||| |||||||| | |||||||||    
T  30904605 ttgtcattttataacataaaggactaaatcgtgacaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgc 30904704  T
Q  318 caa 320  Q
    |||    
T  30904705 caa 30904707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 317
Target Start/End: Complemental strand, 42123821 - 42123703
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagag 298  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||          |||||| || |||||| ||| |||||||||||||||| |    
T  42123821 cataaaaaggataactatgttgttattttataacataaaggactatatcgtacaaaaaaaagataaaggatgaaaatattatctaaaattaagttaaggg 42123722  T
Q  299 actaattatataattttgc 317  Q
    ||||||| | |||||||||    
T  42123721 actaattgtgtaattttgc 42123703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 10682280 - 10682212
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||| |||||| |||||||||||||||    
T  10682280 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 10682212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 14577092 - 14577211
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac---nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagag 298  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||| ||          |||||| ||||||| ||||||||||||| |||||||| |    
T  14577092 aaaaaggataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaggg 14577191  T
Q  299 actaattatataattttgcc 318  Q
    ||||||| | ||||||||||    
T  14577192 actaattgtgtaattttgcc 14577211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 17844104 - 17844040
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagttt 161  Q
    |||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||| ||||    
T  17844104 attttttcaatgaaatttgattttataggcttgtatgatgaagatttgcgtttgtctatgtgttt 17844040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 27912326 - 27912443
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| |||||||| |||||||||||||||||||| ||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||    
T  27912326 aaaaaggataactatcttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 27912425  T
Q  301 taattatataattttgcc 318  Q
    ||||| | ||||||||||    
T  27912426 taattgtgtaattttgcc 27912443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 27958745 - 27958862
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| |||||||| |||||||||||||||||||| ||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||    
T  27958745 aaaaaggataactatcttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 27958844  T
Q  301 taattatataattttgcc 318  Q
    ||||| | ||||||||||    
T  27958845 taattgtgtaattttgcc 27958862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 318
Target Start/End: Complemental strand, 30904478 - 30904361
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| | ||        |||||| ||||||| ||||||||||||| |||||||| ||     
T  30904478 aaaaaggataactatgttgttattttataacataaaggactaaatcctgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggat 30904379  T
Q  301 taattatataattttgcc 318  Q
    ||||| | ||||||||||    
T  30904378 taattgtgtaattttgcc 30904361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 30904581 - 30904513
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||| |||||| |||||||||||||||    
T  30904581 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 30904513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 319
Target Start/End: Complemental strand, 13327380 - 13327261
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac--nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagaga 299  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||          ||||| || |||| ||||||||||||||||||||||  |    
T  13327380 aaaaaggataactatgttgttattttataacataaatgactaaatcgttacaaaaaaaaaaataaaggatgaaagtgttacctaaaattaagttaaggaa 13327281  T
Q  300 ctaattatataattttgcca 319  Q
    |||||| | |||||||||||    
T  13327280 ctaattgtgtaattttgcca 13327261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 27523175 - 27523108
Alignment:
Q  99 tttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||||||||||||||  | |||||||||| ||||| |||||||||||||||||||||    
T  27523175 tttttcaatgaaatttgattttctagacttgtatgatgaaaatttgtgtttgtctatgagtttgatga 27523108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 318
Target Start/End: Original strand, 23792830 - 23792925
Alignment:
Q  223 attttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||||||||||||||||||||||||||||       |||||| ||| ||| |||||||||||||||||||||| |||||||| | | ||||||||    
T  23792830 attttataacataaaggactaaatcgttacaaaaaaagataaaggacaaaagtgttacctaaaattaagttaagggactaattgtgttattttgcc 23792925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 319
Target Start/End: Complemental strand, 44379618 - 44379521
Alignment:
Q  223 attttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcca 319  Q
    ||||||||||||||||||||||||||||||        |||||| ||||||| |||||||||||||||||||||| || ||||| | |||||||||||    
T  44379618 attttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggattaattgtgtaattttgcca 44379521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 319
Target Start/End: Original strand, 30928559 - 30928659
Alignment:
Q  223 attttataacataaaggactaaatcgttacnnnnnnn----gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||||||||||||||||||||||||||||           |||||| ||||||| |||||||||||||||||||||| |||||||| | ||||||||||    
T  30928559 attttataacataaaggactaaatcgttacaaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 30928658  T
Q  319 a 319  Q
    |    
T  30928659 a 30928659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 318
Target Start/End: Complemental strand, 3691679 - 3691582
Alignment:
Q  223 attttataacataaaggactaaatcgttacnnnnnnn--gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||||||||||||||||||||||||||||         |||||| ||||||| ||||||||||||||| |||||| |||||||| | ||||||||||    
T  3691679 attttataacataaaggactaaatcgttacaaaaaaaaagataaaggacgaaagtgttacctaaaattatgttaagggactaattgtgtaattttgcc 3691582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 98 - 163
Target Start/End: Complemental strand, 13327483 - 13327418
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttga 163  Q
    |||||||||| ||||||||||| ||||| | ||||||||||||||||| |||||||||||| ||||    
T  13327483 ttttttcaataaaatttgatttgctaggcttgtatgatgaagatttgcatttgtctatgagattga 13327418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 17875893 - 17875961
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| ||||||| |||||||||  | ||||||||||||||||| |||| |||||||||||||||    
T  17875893 ttttttcaaagaaatttaattttctagacttgtatgatgaagatttgcatttgcctatgagtttgatga 17875961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 34873587 - 34873519
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||||||||| || |||||| ||| |||||||||||||||  |||||| ||||||||||||||    
T  34873587 ttttttcaatgaaattcgagtttctatgtttgtatgatgaagatttaggtttgtttatgagtttgatga 34873519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 35482803 - 35482702
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||||||| | ||||||||    
T  35482803 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 35482704  T
Q  317 cc 318  Q
    ||    
T  35482703 cc 35482702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 13795808 - 13795738
Alignment:
Q  96 aattttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||| ||||||| |||  |||||| |||||||||||||||||||| |||||| || |||||||||||    
T  13795808 aatttttttaatgaaaattgggtttctatgttagtatgatgaagatttgggtttgtttacgagtttgatga 13795738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 320
Target Start/End: Complemental strand, 17875869 - 17875766
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||||||| | |||||||     
T  17875869 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttc 17875770  T
Q  317 ccaa 320  Q
    ||||    
T  17875769 ccaa 17875766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 20178428 - 20178371
Alignment:
Q  261 ataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||| ||||||| |||||||||||||||||||||| |||||||| | ||||||||||    
T  20178428 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 20178371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 20223156 - 20223099
Alignment:
Q  261 ataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||| ||||||| |||||||||||||||||||||| |||||||| | ||||||||||    
T  20223156 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 20223099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 38464763 - 38464832
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||| |||| ||||||| |||||  |||||||||||||||| |||| | ||||||||||||||    
T  38464763 attttttcaataaaatatgattttttaggtgtgtatgatgaagatttgggtttttttatgagtttgatga 38464832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 2967996 - 2968064
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||| | |  ||||||||||||||  ||||| |||||||||||||||    
T  2967996 ttttttcaaagaaatttgattttctatgcttctatgatgaagatttatgtttgcctatgagtttgatga 2968064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 305
Target Start/End: Complemental strand, 2967971 - 2967883
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaatt 305  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| ||||||||    
T  2967971 ttgtcattttataacataaaggactaaatcgtgacaaaaataagataaatgacgaaagtgttacctaaaataaagttaagggactaatt 2967883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 316
Target Start/End: Original strand, 17844169 - 17844224
Alignment:
Q  261 ataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    ||||| ||||||| |||||||||||||||||||||| |||||||| | ||||||||    
T  17844169 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttg 17844224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 305
Target Start/End: Complemental strand, 27912197 - 27912108
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn--gataaaagacgaaaatgttacctaaaattaagttaagagactaatt 305  Q
    |||| ||||||||||||||||||||||||||| ||         |||||| ||||||| ||||||||||||| |||||||| ||||||||    
T  27912197 ttgtaattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaatt 27912108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 305
Target Start/End: Complemental strand, 27958616 - 27958527
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn--gataaaagacgaaaatgttacctaaaattaagttaagagactaatt 305  Q
    |||| ||||||||||||||||||||||||||| ||         |||||| ||||||| ||||||||||||| |||||||| ||||||||    
T  27958616 ttgtaattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaatt 27958527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 318
Target Start/End: Original strand, 42123951 - 42124050
Alignment:
Q  223 attttataacataaaggactaaatcgttacnnnnnnn----gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||||||||||||||||||||||||||||           |||||| ||||||| |||||||||||||||| |||||| | ||||| | ||||||||||    
T  42123951 attttataacataaaggactaaatcgttacaaaaaaaaaaagataaatgacgaaagtgttacctaaaattaaattaagaaattaattgtgtaattttgcc 42124050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 13795572 - 13795516
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||||| ||||||||||||| |||||||||||||||| ||| |||| | ||||||||    
T  13795572 gataaatgacgaaaatgttagctaaaattaagttaagggacgaattgtgtaattttg 13795516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 14577010 - 14577058
Alignment:
Q  118 tttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||| | |||||||||||||||||||||| ||||||| |||||||    
T  14577010 tttctaggcttgtatgatgaagatttgcgtttgcctatgagcttgatga 14577058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 27912221 - 27912289
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||| || |||||||||||||||| | | || |||||||||||| |||||| |||||||| ||||||    
T  27912221 tttttttaaagaaatttgattttctatgcttgtttgatgaagatttacgtttgcctatgagtatgatga 27912289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 27958640 - 27958708
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||| || |||||||||||||||| | | || |||||||||||| |||||| |||||||| ||||||    
T  27958640 tttttttaaagaaatttgattttctatgcttgtttgatgaagatttacgtttgcctatgagtatgatga 27958708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 263 - 318
Target Start/End: Complemental strand, 19406009 - 19405954
Alignment:
Q  263 aaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||||||||| | |||| | ||||||||||||||||| |||||| ||||||||||    
T  19406009 aaaagacgaaagtattacatgaaattaagttaagagacaaattatgtaattttgcc 19405954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 35482828 - 35482895
Alignment:
Q  99 tttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||| |||||| |||||| || |   ||||||||||||||| |||||| |||||||||||||||    
T  35482828 tttttcaaagaaattcgattttatatgcgtgtatgatgaagatttacgtttgcctatgagtttgatga 35482895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 38464873 - 38464912
Alignment:
Q  209 ataactatgttgttattttataacataaaggactaaatcg 248  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  38464873 ataactatgttgatattttataacataaaagactaaatcg 38464912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 305
Target Start/End: Complemental strand, 4128837 - 4128754
Alignment:
Q  223 attttataacataaaggactaaatcgtt-acnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaatt 305  Q
    |||||||||||||||||||||||||||| |        |||||| ||||||| |||||||||||||||| ||||  ||||||||    
T  4128837 attttataacataaaggactaaatcgttaaaaaaagaagataaaggacgaaagtgttacctaaaattaaattaaaggactaatt 4128754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 320
Target Start/End: Complemental strand, 33278991 - 33278933
Alignment:
Q  262 taaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    |||||||| ||| |||||||| ||||||||||||||||||||   | ||||||||||||    
T  33278991 taaaagaccaaattgttacctgaaattaagttaagagactaaaagtgtaattttgccaa 33278933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 7899856 - 7899827
Alignment:
Q  223 attttataacataaaggactaaatcgttac 252  Q
    ||||||||||||||||||||||||||||||    
T  7899856 attttataacataaaggactaaatcgttac 7899827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 9815165 - 9815097
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||| |||||||||| |||| |||||| ||| |||||||||||||||  |||||| ||| ||||||||||    
T  9815165 atttcttcaatgaaaattgaatttctatgtttgtatgatgaagattttggtttgtttat-agtttgatga 9815097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 13327550 - 13327610
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaa--gttaagagactaattatataattttgcc 318  Q
    |||||||||||||| ||||||||||||||||  |||||| ||||||||   ||||||||||    
T  13327550 gataaaagacgaaagtgttacctaaaattaattgttaagggactaattgcgtaattttgcc 13327610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 1214695 - 1214739
Alignment:
Q  273 aatgttacctaaaattaagttaagagactaattatataattttgc 317  Q
    |||||||| |||||||||||||| |||||| | ||||||||||||    
T  1214695 aatgttacttaaaattaagttaatagactattaatataattttgc 1214739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 17866095 - 17866047
Alignment:
Q  267 gacgaaaatgttacctaaaattaagttaagagactaattatataatttt 315  Q
    |||||||||||||||| |||||||||||||  || |||||| |||||||    
T  17866095 gacgaaaatgttacctcaaattaagttaagtaacgaattatgtaatttt 17866047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 246
Target Start/End: Original strand, 31231332 - 31231360
Alignment:
Q  218 ttgttattttataacataaaggactaaat 246  Q
    |||||||||||||||||||||||||||||    
T  31231332 ttgttattttataacataaaggactaaat 31231360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 40277485 - 40277545
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    |||||||||| ||| | |||||||||||||||||||| ||||||   | ||||||||||||    
T  40277485 gataaaagaccaaactattacctaaaattaagttaagtgactaaaagtgtaattttgccaa 40277545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 4e-29; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 3612818 - 3612749
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3612818 attttttcaatgaaatttgattttctaggctagtatgatgaagatttgcgtttgtctatgagtttgatga 3612749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 199 - 315
Target Start/End: Complemental strand, 3612716 - 3612598
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttac--nnnnnnngataaaagacgaaaatgttacctaaaattaagttaag 296  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||          ||||| ||||||||||||||||||||||||||||||    
T  3612716 cataaaaaggataactatgttgttattttataacataaaggactaaatcgttacaaaaaaaaaaataaaggacgaaaatgttacctaaaattaagttaag 3612617  T
Q  297 agactaattatataatttt 315  Q
     |||||||| | |||||||    
T  3612616 ggactaattgtgtaatttt 3612598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 44506170 - 44506239
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  44506170 attttttcaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatga 44506239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 202 - 320
Target Start/End: Original strand, 49621207 - 49621326
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||| ||        |||||||||||||| ||||||||||||| |||||||| |||    
T  49621207 aaaaaggataactatgttgttattttataatataaaggactaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaagggac 49621306  T
Q  301 taattatataattttgccaa 320  Q
    ||||| | ||||||||||||    
T  49621307 taattgtgtaattttgccaa 49621326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 202 - 318
Target Start/End: Complemental strand, 8851921 - 8851804
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||    
T  8851921 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 8851822  T
Q  301 taattatataattttgcc 318  Q
    ||||| | ||||||||||    
T  8851821 taattgtgtaattttgcc 8851804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 48434024 - 48433957
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgat 164  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  48434024 attttttcaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcctatgagtttgat 48433957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 320
Target Start/End: Original strand, 37513319 - 37513438
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||    
T  37513319 aaaaaggataactatgttgatattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 37513418  T
Q  301 taattatataattttgccaa 320  Q
    ||||| | ||||||||||||    
T  37513419 taattgtgtaattttgccaa 37513438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 11121510 - 11121626
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac--nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagaga 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||         |||||| ||||||| ||||||||||||| |||||||| ||    
T  11121510 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaggga 11121609  T
Q  300 ctaattatataattttg 316  Q
    |||||| | ||||||||    
T  11121610 ctaattgtgtaattttg 11121626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 199 - 318
Target Start/End: Original strand, 44506271 - 44506389
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaaga 297  Q
    ||||||||| ||||||  ||||||||||||||||||||||||||||||||||||         ||||| ||||||||||||||||||||||||||||||     
T  44506271 cataaaaaggataact--gttgttattttataacataaaggactaaatcgttacaaaaaaataataaaggacgaaaatgttacctaaaattaagttaagg 44506368  T
Q  298 gactaattatataattttgcc 318  Q
    || ||||| | ||||||||||    
T  44506369 gattaattgtgtaattttgcc 44506389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 320
Target Start/End: Original strand, 22316948 - 22317067
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||    
T  22316948 aaaaaggataactttgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 22317047  T
Q  301 taattatataattttgccaa 320  Q
    ||||  | ||||||||||||    
T  22317048 taatcgtgtaattttgccaa 22317067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 23043411 - 23043342
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||| |||||||||||||||||| | ||||||||||| |||||||||| |||||||||||||||    
T  23043411 attttttcaaagaaatttgattttctaggcttgtatgatgaaggtttgcgtttgcctatgagtttgatga 23043342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 318
Target Start/End: Original strand, 25847680 - 25847790
Alignment:
Q  209 ataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattat 307  Q
    ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| || ||||| |||||||| |    
T  25847680 ataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagggactaattgt 25847779  T
Q  308 ataattttgcc 318  Q
     ||||||||||    
T  25847780 gtaattttgcc 25847790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 318
Target Start/End: Complemental strand, 49711510 - 49711401
Alignment:
Q  209 ataactatgttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattata 308  Q
    ||||||||||||||||||||||||||||| ||||||||||| |        |||||| |||| || ||||||||||||| |||||||| |||||||| |     
T  49711510 ataactatgttgttattttataacataaatgactaaatcgtgataaaaaaagataaaggacgtaagtgttacctaaaataaagttaagggactaattgtg 49711411  T
Q  309 taattttgcc 318  Q
    ||||||||||    
T  49711410 taattttgcc 49711401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 318
Target Start/End: Complemental strand, 9296499 - 9296383
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagact 301  Q
    |||||| ||||||||||||||||||||||||||| | ||||||||||| ||        ||||| ||||||| ||||||||||||| |||||||| ||||    
T  9296499 aaaaaggataactatgttgttattttataacatagatgactaaatcgtgacaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggact 9296400  T
Q  302 aattatataattttgcc 318  Q
    |||| | || |||||||    
T  9296399 aattgtgtagttttgcc 9296383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 22975573 - 22975688
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||| ||         ||||| ||||||| ||||||||||||| |||||||| |||    
T  22975573 aaaaaggataactttgttgttattttataacataaaggactaaatcgtaacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggac 22975672  T
Q  301 taattatataattttg 316  Q
    ||||| | ||||||||    
T  22975673 taattgtgtaattttg 22975688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 28829980 - 28830098
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac--nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagaga 299  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||| ||         |||||| ||||||| ||||| ||||||| |||||||| ||    
T  28829980 aaaaaggataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttagctaaaataaagttaaggga 28830079  T
Q  300 ctaattatataattttgcc 318  Q
    |||||| | ||||||||||    
T  28830080 ctaattgtgtaattttgcc 28830098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 22316845 - 22316913
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||| |||||| ||| |||||||||||    
T  22316845 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctacgagtttgatga 22316913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 22975470 - 22975538
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||| |||||| ||| |||||||||||    
T  22975470 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctacgagtttgatga 22975538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 315
Target Start/End: Original strand, 36229998 - 36230106
Alignment:
Q  209 ataactatgttgttattttataacataaaggactaaatcgttac--nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaatta 306  Q
    ||||||||||||||||||||||||||||||||||||||||| ||         |||||| ||||||| ||||||||||||| |||||||| || |||||     
T  36229998 ataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggattaattg 36230097  T
Q  307 tataatttt 315  Q
    | |||||||    
T  36230098 tgtaatttt 36230106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 17574496 - 17574563
Alignment:
Q  99 tttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||| ||||||||||| |||| |  ||||||||| |||||||||||||||||||||||||||    
T  17574496 tttttcaatgcaatttgattttttaggcttttatgatgaaaatttgcgtttgtctatgagtttgatga 17574563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 44991091 - 44991158
Alignment:
Q  99 tttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||||||||||| |||||| ||| |||||||||||||| | |||||| ||||||||||||||    
T  44991091 tttttcaatgaaatttgagtttctatgtttgtatgatgaagattcgagtttgtttatgagtttgatga 44991158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 305
Target Start/End: Complemental strand, 48433917 - 48433811
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac---nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagag 298  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||| ||          |||||| ||||||| ||||||||||||| |||||||| |    
T  48433917 aaaaaggataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaggg 48433818  T
Q  299 actaatt 305  Q
    |||||||    
T  48433817 actaatt 48433811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 305
Target Start/End: Complemental strand, 55009198 - 55009112
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaatt 305  Q
    |||||||||||||||||||||||||||||||| ||       |||||| ||||||| ||||||||||||| ||||||| |||||||||    
T  55009198 ttgttattttataacataaaggactaaatcgtgacaaaaaaagataaaggacgaaagtgttacctaaaataaagttaa-agactaatt 55009112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 218 - 320
Target Start/End: Complemental strand, 28829853 - 28829751
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgc 317  Q
    |||| ||||||||||||||||||||||||||| ||       |||||| ||||||| ||||||||||||| |||||||   ||||||| | |||||||||    
T  28829853 ttgtcattttataacataaaggactaaatcgtgacaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaagaactaattgtgtaattttgc 28829754  T
Q  318 caa 320  Q
    |||    
T  28829753 caa 28829751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 316
Target Start/End: Original strand, 55009333 - 55009442
Alignment:
Q  209 ataactatgttgttattttataacataaaggactaaatcgt--tacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaatta 306  Q
    |||||||||||||||||| ||||||||||||||||||||||  ||        |||||| ||||||| |||||| |||||| |||||||| ||||||||     
T  55009333 ataactatgttgttatttgataacataaaggactaaatcgtgataaaaaaaaagataaaggacgaaagtgttacttaaaataaagttaagggactaattg 55009432  T
Q  307 tataattttg 316  Q
    | ||||||||    
T  55009433 tgtaattttg 55009442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 8852025 - 8851957
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||| | | || |||||||||||| |||||| |||||||||||||||    
T  8852025 ttttttcaaagaaatttgattttctatgcttgtttgatgaagatttacgtttgcctatgagtttgatga 8851957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 9296602 - 9296534
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| ||||||||||||||||||   ||||||||||||||| |||||| || ||||||||||||    
T  9296602 ttttttcaaagaaatttgattttctaggcatgtatgatgaagatttacgtttgcctgtgagtttgatga 9296534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 22316821 - 22316720
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||||||| | ||||||||    
T  22316821 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 22316722  T
Q  317 cc 318  Q
    ||    
T  22316721 cc 22316720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 22975446 - 22975345
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||| ||||||||||||||||| |||||||| |||||||| | ||||||||    
T  22975446 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaatgacaaaaatgttacctaaaataaagttaagggactaattgtgtaattttg 22975347  T
Q  317 cc 318  Q
    ||    
T  22975346 cc 22975345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 28829877 - 28829945
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| ||||||| |||||||| | | |||||||||||||||||||||  |||||||||||||||    
T  28829877 ttttttcaaagaaatttaattttctaagcttgtatgatgaagatttgcgtttacctatgagtttgatga 28829945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 33491692 - 33491752
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||    
T  33491692 gataaaggacgaaagtgttacctaaaataaagttaagagactaattgtgtaattttgccaa 33491752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 37513216 - 37513284
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||| || |||||||||||||||||| | ||||||||||||||| | |||| |||||||||||||||    
T  37513216 tttttttaaagaaatttgattttctaggcttgtatgatgaagatttacatttgcctatgagtttgatga 37513284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 315
Target Start/End: Complemental strand, 44506142 - 44506049
Alignment:
Q  223 attttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataatttt 315  Q
    ||||||||||||||||||||||||||||||        |||||| ||||||| |||||||||||||||||||||| || ||||| | |||||||    
T  44506142 attttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggattaattgtgtaatttt 44506049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 49621103 - 49621171
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| ||||||||||||| || | | ||||||||||||||| |||||| |||||||||||||||    
T  49621103 ttttttcaaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcctatgagtttgatga 49621171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 49711620 - 49711552
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||| || ||||||||||||| |||| | ||||||||||||||| |||||| |||||||||||||||    
T  49711620 tttttttaaagaaatttgattttttaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 49711552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 49984931 - 49984863
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||| ||| |||||||||| |||| |||||| || ||||||||||||    
T  49984931 ttttttcaaagaaatttgattttctaagtttgtatgatgaatatttacgtttgcctgtgagtttgatga 49984863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 55009222 - 55009290
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||| | | ||||||||||||||| |||||  |||||||||||||||    
T  55009222 ttttttcaaagaaatttgattttctatgcttgtatgatgaagatttacgtttacctatgagtttgatga 55009290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 17574473 - 17574373
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgc 317  Q
    |||| ||||||||||||||||||||||||||| ||        ||||| ||||||| |||||||||||||||||||||  ||| |||| | |||||||||    
T  17574473 ttgtaattttataacataaaggactaaatcgtaacaaaaaaaaataaaggacgaaagtgttacctaaaattaagttaatggacgaattgtgtaattttgc 17574374  T
Q  318 c 318  Q
    |    
T  17574373 c 17574373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 35850871 - 35850804
Alignment:
Q  99 tttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||| | |||||||||||| ||||||||||||||||  ||||| ||||||||||||||    
T  35850871 tttttcaataaaatctaattttctaggtttgtatgatgaagatttgaatttgtttatgagtttgatga 35850804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 320
Target Start/End: Complemental strand, 36229864 - 36229761
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||||||| | |||||||     
T  36229864 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttta 36229765  T
Q  317 ccaa 320  Q
    ||||    
T  36229764 ccaa 36229761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 315
Target Start/End: Complemental strand, 49984828 - 49984714
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||| | ||||||||||| ||        |||||| ||||||||| ||| ||||||| || |||| ||||    
T  49984828 aaaaaggataactatgttgttattttataacatagaagactaaatcgtgacaaaaaaaagataaaggacgaaaatattatctaaaataaaattaaaagac 49984729  T
Q  301 taattatataatttt 315  Q
    ||||  |||||||||    
T  49984728 taatggtataatttt 49984714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 25847546 - 25847445
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        ||||||  |||||| ||||||||||||| || ||||| |||||||| ||||||||||    
T  25847546 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtgttacctaaaataaaattaagggactaattgtataattttg 25847447  T
Q  317 cc 318  Q
    ||    
T  25847446 cc 25847445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 51001552 - 51001612
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    |||||||||| ||||| |||||||||||||||||||| ||||| |||| || |||||||||    
T  51001552 gataaaagactaaaattttacctaaaattaagttaagggactatttatgtagttttgccaa 51001612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 249
Target Start/End: Complemental strand, 23043304 - 23043257
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgt 249  Q
    |||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  23043304 aaaaaggataactatgtttttattttataacatagaggactaaatcgt 23043257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 34333782 - 34333849
Alignment:
Q  99 tttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||||||| ||  ||| |||||| |||||||||||| ||| |||||| ||||||||||||||    
T  34333782 tttttcaatgaaatctggatttataggtttgtatgatgaagagttgagtttgtttatgagtttgatga 34333849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 23043433 - 23043535
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnnga--taaaagacgaaaatgttacctaaaattaagttaagagactaattatataatttt 315  Q
    |||| ||||||||||||||||||||||||||| ||        |  |||| ||||||||||||||||||||| |||||||  |||||||| | |||||||    
T  23043433 ttgtcattttataacataaaggactaaatcgtgacaaaaaaataaataaaggacgaaaatgttacctaaaataaagttaaaggactaattgtgtaatttt 23043532  T
Q  316 gcc 318  Q
    |||    
T  23043533 gcc 23043535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 49711693 - 49711743
Alignment:
Q  267 gacgaaaatgttacctaaaattaagttaagagactaattatataattttgc 317  Q
    ||||||| ||||||||||||| |||||||| |||||||||| |||||||||    
T  49711693 gacgaaagtgttacctaaaataaagttaagggactaattatgtaattttgc 49711743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 49984955 - 49985034
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaag 296  Q
    |||| ||||||||||||||||||||||||||| ||        |||||||||||||| ||||||||||||| ||||||||    
T  49984955 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaag 49985034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 52090940 - 52090882
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    |||||| ||| |||| ||||||||||| ||||||||| ||||| |||||||||||||||    
T  52090940 gataaaggactaaaacgttacctaaaaataagttaagggactatttatataattttgcc 52090882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 305
Target Start/End: Original strand, 8852049 - 8852138
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn--gataaaagacgaaaatgttacctaaaattaagttaagagactaatt 305  Q
    |||| ||||||||||||||||||||||||||| ||         |||||| ||||||| ||||||||||||| |||||||| ||||||||    
T  8852049 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaatt 8852138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 48434046 - 48434147
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnngataaaa--gacgaaaatgttacctaaaattaagttaagagactaattatataatttt 315  Q
    |||| ||||||||||||||||||||||||||| ||        ||| ||  ||||||| ||||||||||||| |||||||| |||||||| | |||||||    
T  48434046 ttgtcattttataacataaaggactaaatcgtgacaaaaaaatatataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 48434145  T
Q  316 gc 317  Q
    ||    
T  48434146 gc 48434147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 10687880 - 10687936
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||||| || |||| |||||||||||||||||||||||||| |||| | ||||||||    
T  10687880 gataaaggatgaaagtgttacctaaaattaagttaagagacgaattgtgtaattttg 10687936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 25847570 - 25847638
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| ||||||||||| | || |   ||||||||||||||| |||||| |||||||||||||||    
T  25847570 ttttttcaaagaaatttgattctatatgcgtgtatgatgaagatttacgtttgcctatgagtttgatga 25847638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 35415498 - 35415558
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    |||||||||| ||| |||||||| ||||||||||||| ||||||  || ||||||||||||    
T  35415498 gataaaagaccaaactgttacctgaaattaagttaagggactaaaaatgtaattttgccaa 35415558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 319
Target Start/End: Original strand, 35850894 - 35850995
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgc 317  Q
    |||| ||||||||||||||| ||||||||||  ||       ||| ||  |||||| |||||||||||||||| |||| |||| |||||| |||||||||    
T  35850894 ttgtcattttataacataaaagactaaatcgggacaaaaaaagatgaagaacgaaagtgttacctaaaattaaattaaaagacgaattatgtaattttgc 35850993  T
Q  318 ca 319  Q
    ||    
T  35850994 ca 35850995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 36229888 - 36229956
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| ||||||||||||| || |   ||||||||||||||| ||||||  ||||||||||||||    
T  36229888 ttttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgcttatgagtttgatga 36229956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 1342011 - 1342078
Alignment:
Q  99 tttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||||||||||| ||||| | || ||||||||| | |||| |||||| ||||||||| ||||    
T  1342011 tttttcaatgaaatttgagtttcttgatttgtatgatgaggttttgggtttgtttatgagtttaatga 1342078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 318
Target Start/End: Complemental strand, 5048436 - 5048389
Alignment:
Q  271 aaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    |||| |||| |||||||||||||||||||||| |||| ||||||||||    
T  5048436 aaaacgttatctaaaattaagttaagagactatttatgtaattttgcc 5048389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 11121409 - 11121476
Alignment:
Q  99 tttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||| || |||||||||||||||| | | ||||||||||||||| |||||  |||||||||| ||||    
T  11121409 tttttgaaagaaatttgattttctatgcttgtatgatgaagatttacgtttaactatgagttttatga 11121476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 303
Target Start/End: Complemental strand, 45567466 - 45567423
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaa 303  Q
    |||||||||| ||| |||||||||||||||||||||| ||||||    
T  45567466 gataaaagactaaactgttacctaaaattaagttaagggactaa 45567423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 17574598 - 17574632
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataa 236  Q
    |||||| ||||||||||||||||||||||||||||    
T  17574598 aaaaaggataactatgttgttattttataacataa 17574632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 31574309 - 31574251
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    |||||| ||| ||| |||||||||||||||||||||| || |||  |||||||||||||    
T  31574309 gataaaggaccaaactgttacctaaaattaagttaagggattaaaaatataattttgcc 31574251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 45278516 - 45278482
Alignment:
Q  214 tatgttgttattttataacataaaggactaaatcg 248  Q
    ||||||| |||||||||||||||||||||||||||    
T  45278516 tatgttgatattttataacataaaggactaaatcg 45278482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 43006980 - 43006911
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||||||||| ||| ||||  |||| |||||||||| ||||| |||| | || |||||||||||    
T  43006980 attttttcaatgaaatatgaatttcatggtttgtatgatgaatatttgggtttatttacgagtttgatga 43006911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 45279476 - 45279411
Alignment:
Q  99 tttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgat 164  Q
    |||||||||  ||| |||||||  ||||| ||||||||||||||||  ||||| ||||||||||||    
T  45279476 tttttcaatataatctgatttttcaggtttgtatgatgaagatttgaatttgtttatgagtttgat 45279411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 101)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 199 - 318
Target Start/End: Original strand, 30055434 - 30055549
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagag 298  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||        | ||| |||||||||||||||||||||||||||||| |    
T  30055434 cataaaaaggataactatgttgttattttataacataaaggactaaattgttacaaaa----aaaaaggacgaaaatgttacctaaaattaagttaaggg 30055529  T
Q  299 actaattatataattttgcc 318  Q
    ||||||| | ||||||||||    
T  30055530 actaattgtgtaattttgcc 30055549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 2686103 - 2686172
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  2686103 attttttcaatgaaatttgattttctaggctagtatgatgacgatttgcgtttgtctatgagtttgatga 2686172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 202 - 316
Target Start/End: Complemental strand, 21707719 - 21707605
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagact 301  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||| ||       ||||||| |||||||| |||| |||||| |||||||||||||    
T  21707719 aaaaaggataactatgttgttattttataacataaatgactaaatcgtgacaaaaaaagataaaaaacgaaaatattacttaaaataaagttaagagact 21707620  T
Q  302 aattatataattttg 316  Q
    |||||| ||||||||    
T  21707619 aattatgtaattttg 21707605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 30799446 - 30799513
Alignment:
Q  99 tttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  30799446 tttttcaatgaaatttgattttctaggctagtatgatgaatatttgcgtttgtctatgagtttgatga 30799513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 318
Target Start/End: Complemental strand, 52690212 - 52690096
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagact 301  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||| ||       |||||| ||||||||| ||||||||||| |||||||| ||||    
T  52690212 aaaaaggataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaagataaaggacgaaaatattacctaaaataaagttaagcgact 52690113  T
Q  302 aattatataattttgcc 318  Q
    |||| | ||||||||||    
T  52690112 aattgtgtaattttgcc 52690096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 202 - 320
Target Start/End: Complemental strand, 23163398 - 23163279
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||    
T  23163398 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 23163299  T
Q  301 taattatataattttgccaa 320  Q
    ||||| | ||||||||||||    
T  23163298 taattgtgtaattttgccaa 23163279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 199 - 317
Target Start/End: Original strand, 30799545 - 30799668
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttac-----nnnnnnngataaaagacgaaaatgttacctaaaattaagtt 293  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||            |||||| |||||||||||||||||||||||||||    
T  30799545 cataaaaaggataactatgttgttattttataacataaaagactaaatcgttacaaaaaaaaaaaagataaaggacgaaaatgttacctaaaattaagtt 30799644  T
Q  294 aagagactaattatataattttgc 317  Q
    ||| |||||||| | |||||||||    
T  30799645 aagggactaattgtgtaattttgc 30799668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 25297806 - 25297875
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  25297806 attttttcaatgaaatctgattttctaggctagtatgacgaagatttgcgtttgtctatgagtttgatga 25297875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 13294831 - 13294948
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||    
T  13294831 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 13294930  T
Q  301 taattatataattttgcc 318  Q
    ||||| | ||||||||||    
T  13294931 taattgtgtaattttgcc 13294948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 49621666 - 49621783
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||    
T  49621666 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 49621765  T
Q  301 taattatataattttgcc 318  Q
    ||||| | ||||||||||    
T  49621766 taattgtgtaattttgcc 49621783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 33692491 - 33692607
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagact 301  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||| ||       |||||| ||||||| ||||||||||||| || ||||| ||||    
T  33692491 aaaaaggataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaagataaatgacgaaagtgttacctaaaataaaattaagggact 33692590  T
Q  302 aattatataattttgcc 318  Q
    |||| | ||||||||||    
T  33692591 aattgtgtaattttgcc 33692607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 202 - 319
Target Start/End: Original strand, 5260421 - 5260539
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||| || |||||| | ||        |||||| ||||||||||||||||||||| ||||||| ||||    
T  5260421 aaaaaggataactatgttgttattttataacataaatgattaaatcatgacaaaacaaagataaaggacgaaaatgttacctaaaataaagttaaaagac 5260520  T
Q  301 taattatataattttgcca 319  Q
    ||||||| |||||||||||    
T  5260521 taattatgtaattttgcca 5260539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 317
Target Start/End: Complemental strand, 46143389 - 46143273
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| |||||||||||||||||||||||||||||||||||||| || ||        |||||| ||||||||||||||||||||| || ||||| |||    
T  46143389 aaaaaggataactatgttgttattttataacataaaggactaaattgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaaattaagggac 46143290  T
Q  301 taattatataattttgc 317  Q
    ||||| | |||||||||    
T  46143289 taattgtgtaattttgc 46143273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 315
Target Start/End: Original strand, 33369747 - 33369854
Alignment:
Q  209 ataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattat 307  Q
    ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||||||| |||||||||||||  |||||||||||||||| |    
T  33369747 ataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaatatagttaagagactaattgt 33369846  T
Q  308 ataatttt 315  Q
     |||||||    
T  33369847 gtaatttt 33369854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 55140320 - 55140389
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||| |||||||||||||||||| | |||| ||||||||||||||||| |||||||||||||||    
T  55140320 attttttcaaagaaatttgattttctaggcttgtataatgaagatttgcgtttgcctatgagtttgatga 55140389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 320
Target Start/End: Complemental strand, 2686077 - 2685983
Alignment:
Q  223 attttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    ||||||||||||||||||||||||||||||        | ||||||||||| |||||||||||||||||||||| |||||||| | ||||||||||||    
T  2686077 attttataacataaaggactaaatcgttacaaaaa---aaaaaagacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccaa 2685983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 21707823 - 21707755
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||| |||||| |||||||||||||||    
T  21707823 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 21707755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 199 - 315
Target Start/End: Original strand, 25297906 - 25298023
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaaga 297  Q
    ||||||||| |||||||||||||||||||||||||||||| | |||||||||||         ||||| || ||||||||||| |||||||||||||||     
T  25297906 cataaaaaggataactatgttgttattttataacataaagaattaaatcgttacaaaaaaaaaataaaggatgaaaatgttacttaaaattaagttaagg 25298005  T
Q  298 gactaattatataatttt 315  Q
    |||||||| | |||||||    
T  25298006 gactaattgtgtaatttt 25298023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 28458742 - 28458674
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||| |||||||||||||||| |||||||||||||||    
T  28458742 ttttttcaaagaaatttgattttctaggcttgtatgttgaagatttgcgtttgcctatgagtttgatga 28458674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 33369637 - 33369705
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||| |||||| |||||||||||||||    
T  33369637 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 33369705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 33692387 - 33692455
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||||| |||| |||||||||||||||    
T  33692387 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttgcatttgcctatgagtttgatga 33692455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 41689517 - 41689585
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||| |||||| |||||||||||||||    
T  41689517 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 41689585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 318
Target Start/End: Complemental strand, 42856913 - 42856804
Alignment:
Q  209 ataactatgttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattata 308  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||        ||||| ||||||| ||||||||||||| || ||||| |||||||| |     
T  42856913 ataactatgttgttattttataacataaaagactaaatcgtgaccaaaaaaaataaaggacgaaagtgttacctaaaataaaattaagggactaattgtg 42856814  T
Q  309 taattttgcc 318  Q
    ||||||||||    
T  42856813 taattttgcc 42856804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 55742733 - 55742801
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||| |||||| |||||||||||||||    
T  55742733 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 55742801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 100 - 166
Target Start/End: Original strand, 3546616 - 3546682
Alignment:
Q  100 ttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||| |||||||||||||||||| | ||||||||||||||| |||||| |||||||||||||||    
T  3546616 ttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 3546682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 218 - 305
Target Start/End: Complemental strand, 5260294 - 5260207
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaatt 305  Q
    |||| ||||||||||||||||||||||||||| ||       |||||| ||||||||||||||||||||| |||||||| ||||||||    
T  5260294 ttgtcattttataacataaaggactaaatcgtgacaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaatt 5260207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 22335555 - 22335625
Alignment:
Q  96 aattttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||| |||||| | ||||||| ||||    
T  22335555 aattttttcaatgaaatctgattttctaggtttgtatgatgaagatttgggtttgtttgtgagtttaatga 22335625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 209 - 315
Target Start/End: Complemental strand, 50161227 - 50161118
Alignment:
Q  209 ataactatgttgttattttataacataaaggactaaatcgttac---nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaatt 305  Q
    ||||||||||||||||||||||||||||||||||||||||| ||          |||||| ||||||| ||||||||||||| |||||||| ||||||||    
T  50161227 ataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaatt 50161128  T
Q  306 atataatttt 315  Q
     | |||||||    
T  50161127 gtgtaatttt 50161118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 318
Target Start/End: Original strand, 3546724 - 3546836
Alignment:
Q  209 ataactatgttgttattttataacataaaggactaaatcgttac---nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaatt 305  Q
    |||||||||||||||||||||||||||||||||||||| || ||          |||||| ||||||| ||||||||||||| ||||||||| |||||||    
T  3546724 ataactatgttgttattttataacataaaggactaaattgtgacaaaaaaaaaagataaatgacgaaagtgttacctaaaataaagttaagaaactaatt 3546823  T
Q  306 atataattttgcc 318  Q
     | ||||||||||    
T  3546824 gtgtaattttgcc 3546836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 30055334 - 30055403
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||| |||||||||||||| |  ||||||||| |||||||||||||| |||||||||||||||    
T  30055334 attttttcaataaaatttgattttcttgactagtatgataaagatttgcgtttgcctatgagtttgatga 30055403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 318
Target Start/End: Original strand, 37872998 - 37873108
Alignment:
Q  209 ataactatgttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattat 307  Q
    |||||| |||||||||||||||||||||| ||||||||||| ||        |||||| ||||||| |||| | |||||| |||||||| ||||||||||    
T  37872998 ataactttgttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaggacgaaagtgttgcataaaataaagttaagggactaattat 37873097  T
Q  308 ataattttgcc 318  Q
    |||||||||||    
T  37873098 ataattttgcc 37873108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 320
Target Start/End: Complemental strand, 9525918 - 9525803
Alignment:
Q  209 ataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaa---gacgaaaatgttacctaaaattaagttaagagactaat 304  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||        |||||||   ||||||| ||||||||||||| |||||||| |||||||    
T  9525918 ataactatgttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaaaaggacgaaagtgttacctaaaataaagttaagggactaat 9525819  T
Q  305 tatataattttgccaa 320  Q
    | | ||||||||||||    
T  9525818 tgtgtaattttgccaa 9525803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 20931197 - 20931129
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||| | | ||||||||||||||| |||||| |||||||||||||||    
T  20931197 ttttttcaaagaaatttgattttctaagcttgtatgatgaagatttacgtttgcctatgagtttgatga 20931129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 21053516 - 21053448
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||| |||||| ||| |||||||||||    
T  21053516 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctacgagtttgatga 21053448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 48419437 - 48419369
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||  ||||||||||||||||| | ||||||||||||||| |||||| |||||||||||||||    
T  48419437 ttttttcaaaaaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 48419369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 50977672 - 50977604
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||| ||| ||||||| |||||| |||||||||||||||| |||||| ||||||||||||||    
T  50977672 ttttttcaatggaatatgattttttaggtttgtatgatgaagatttgagtttgtttatgagtttgatga 50977604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 52690316 - 52690249
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | |||||||||||||||||| ||| |||||||||||||||    
T  52690316 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttgcg-ttgcctatgagtttgatga 52690249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 318
Target Start/End: Complemental strand, 25297778 - 25297680
Alignment:
Q  223 attttataacataaaggactaaatcgttacnnnnnnn---gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||||||||||||||||||||||||||||          |||||| ||||||| |||||||||||||||||||||| |||||||| | ||||||||||    
T  25297778 attttataacataaaggactaaatcgttacaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 25297680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 320
Target Start/End: Complemental strand, 26202623 - 26202520
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||||||| | ||||||||    
T  26202623 ttgtcattttataacataaaggactaaatcgtgacaagaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 26202524  T
Q  317 ccaa 320  Q
    ||||    
T  26202523 ccaa 26202520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 320
Target Start/End: Complemental strand, 33692363 - 33692260
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||||||| | ||||||||    
T  33692363 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 33692264  T
Q  317 ccaa 320  Q
    ||||    
T  33692263 ccaa 33692260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 320
Target Start/End: Complemental strand, 37872870 - 37872765
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn---gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattt 314  Q
    |||| ||||||||||||||||||||||||||| ||          |||||| ||||||||||||||||||||| |||||||| |||||||| | ||||||    
T  37872870 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattt 37872771  T
Q  315 tgccaa 320  Q
    ||||||    
T  37872770 tgccaa 37872765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 252
Target Start/End: Original strand, 2686204 - 2686257
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttac 252  Q
    ||||||||| ||||| |||||||||||||||||||||||| |||||||||||||    
T  2686204 cataaaaaggataacaatgttgttattttataacataaagtactaaatcgttac 2686257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 5260318 - 5260386
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||| | | ||||||||||||||| ||| || |||||||||||||||    
T  5260318 ttttttcaaagaaatttgattttctatgcttgtatgatgaagatttacgtctgcctatgagtttgatga 5260386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 318
Target Start/End: Complemental strand, 20931092 - 20930975
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| | |||||| |||||||||||||||||||| |||||||| || ||        |||||| ||||||| ||||||||||||| |||||||| |||    
T  20931092 aaaaaggacaactatattgttattttataacataaaagactaaattgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 20930993  T
Q  301 taattatataattttgcc 318  Q
    ||||| | ||||||||||    
T  20930992 taattgtgtaattttgcc 20930975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 23163524 - 23163625
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||||||| | ||||||||    
T  23163524 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 23163623  T
Q  317 cc 318  Q
    ||    
T  23163624 cc 23163625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 23549718 - 23549650
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||  |||||| |||||||||| | |||||||||||||||||||||| |||||| ||||||||    
T  23549718 ttttttcaaaaaaatttaattttctaggcttgtatgatgaagatttgcgtttgcctatgaatttgatga 23549650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 316
Target Start/End: Complemental strand, 28458639 - 28458523
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac--nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagaga 299  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||| ||         |||||| |||| || ||||||||||||| | |||||| ||    
T  28458639 aaaaaggataactatattgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacggaagtgttacctaaaataatgttaaggga 28458540  T
Q  300 ctaattatataattttg 316  Q
    |||||| | ||||||||    
T  28458539 ctaattgtgtaattttg 28458523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 42857022 - 42856954
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||  ||||||||||||||| | | ||||||||||||||| |||||| |||||||||||||||    
T  42857022 ttttttcaaaaaaatttgattttctaagcttgtatgatgaagatttacgtttgcctatgagtttgatga 42856954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 48419461 - 48419562
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||||||||||||||||| |||||||| |||||||| | | ||||||    
T  48419461 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgttattttg 48419560  T
Q  317 cc 318  Q
    ||    
T  48419561 cc 48419562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 49621540 - 49621439
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||||||| | ||||||||    
T  49621540 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 49621441  T
Q  317 cc 318  Q
    ||    
T  49621440 cc 49621439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 52690385 - 52690445
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||    
T  52690385 gataaaggacgaaagtgttacctaaaataaagttaagagactaattgtgtaattttgccaa 52690445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 55742836 - 55742953
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||| ||         ||||| ||||||| ||||| ||||||| |||||||  |||    
T  55742836 aaaaaggataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttatctaaaataaagttaaaggac 55742935  T
Q  301 taattatataattttgcc 318  Q
    ||||| | ||||||||||    
T  55742936 taattgtgtaattttgcc 55742953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 26202647 - 26202714
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatg 165  Q
    ||||||||| ||||||| ||||||| || | |||||||||||||||||||||  ||||||||||||||    
T  26202647 ttttttcaaagaaatttaattttcttggcttgtatgatgaagatttgcgtttacctatgagtttgatg 26202714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 9851907 - 9851961
Alignment:
Q  261 ataaaagacgaaaatgttacctaaaattaagttaagagactaattatataatttt 315  Q
    ||||| |||||||||||||| ||||||||||||||||||| |||| |||||||||    
T  9851907 ataaatgacgaaaatgttacttaaaattaagttaagagacgaattgtataatttt 9851961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 304
Target Start/End: Complemental strand, 23549576 - 23549473
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||| ||||||||||||||||||| ||||||||||||| ||        |||||||||| ||| | ||||||||||| |||||||| |||    
T  23549576 aaaaaggataactacgttgttattttataacatagaggactaaatcgtaacaaaaaaaagataaaagactaaagtattacctaaaataaagttaagggac 23549477  T
Q  301 taat 304  Q
    ||||    
T  23549476 taat 23549473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 320
Target Start/End: Original strand, 28458766 - 28458869
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| | ||||||||||| |||||||| |||||||| | ||||||||    
T  28458766 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtattacctaaaataaagttaagggactaattgtgtaattttg 28458865  T
Q  317 ccaa 320  Q
    ||||    
T  28458866 ccaa 28458869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 50161361 - 50161460
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||||||| | ||||||||    
T  50161361 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 50161460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 563715 - 563646
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||||| ||| ||||||| |||||| ||||||| || ||||| |||||| ||||||||||||||    
T  563715 attttttcaatggaatatgattttttaggtttgtatgataaatatttgagtttgtttatgagtttgatga 563646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 315
Target Start/End: Original strand, 41689620 - 41689734
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||| |||| || ||        |||||| ||||||||| |||| |||||| |||||||| | |    
T  41689620 aaaaaggataactatgttgttattttataacataaaggacaaaattgtaacaaaaaaaagataaaggacgaaaatattacttaaaataaagttaaggggc 41689719  T
Q  301 taattatataatttt 315  Q
    ||||| | |||||||    
T  41689720 taattgtgtaatttt 41689734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 320
Target Start/End: Complemental strand, 55140298 - 55140196
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgc 317  Q
    |||| ||||||||| ||||||||||||||||| ||       |||||| ||||||| ||||||||||||| |||||||| || ||||  | |||||||||    
T  55140298 ttgtcattttataaaataaaggactaaatcgtgacaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggattaatcgtgtaattttgc 55140199  T
Q  318 caa 320  Q
    |||    
T  55140198 caa 55140196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 3546590 - 3546490
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn--gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataatttt 315  Q
    |||| ||||||||||||||||||||||||||| ||         |||||| ||| ||| ||||||||||||| |||||||| |||||||||| |||||||    
T  3546590 ttgtcattttataacataaaggactaaatcgtgaccaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaagggactaattatgtaatttt 3546491  T
Q  316 g 316  Q
    |    
T  3546490 g 3546490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 9526029 - 9525961
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||| || ||||||||||||| || | | ||||||||||||||| |||||| |||||||||||||||    
T  9526029 ttttttaaaagaaatttgattttataagcttgtatgatgaagatttacgtttgcctatgagtttgatga 9525961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 13294728 - 13294796
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||| | | ||||||||||||||| | |||| ||||| |||||||||    
T  13294728 ttttttcaaagaaatttgattttctatgcttgtatgatgaagatttacatttgcctatgtgtttgatga 13294796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 21053408 - 21053368
Alignment:
Q  209 ataactatgttgttattttataacataaaggactaaatcgt 249  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  21053408 ataactgtgttgttattttataacataaaggactaaatcgt 21053368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 21360515 - 21360455
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    |||||| ||| |||| ||||||||||||||||||||| ||||| |||| ||||||||||||    
T  21360515 gataaaggactaaaacgttacctaaaattaagttaagggactatttatgtaattttgccaa 21360455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 23163500 - 23163432
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| ||||||||||||| || | | |||| |||||||||| |||||| |||||||||||||||    
T  23163500 ttttttcaaagaaatttgattttatatgcttgtataatgaagatttacgtttgcctatgagtttgatga 23163432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 223 - 319
Target Start/End: Complemental strand, 30055306 - 30055207
Alignment:
Q  223 attttataacataaaggactaaatcgttacnnnnnnnga---taaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcca 319  Q
    ||||||||||||||||||||||||||||||        |   |||| ||| ||| |||||||||||||||||||||| |||||||| | |||||||||||    
T  30055306 attttataacataaaggactaaatcgttacaaaaaaataaaataaaggacaaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcca 30055207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 41689447 - 41689387
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    |||||| ||||||| ||||||||||||| |||||||| |||||||| | ||||||||||||    
T  41689447 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgccaa 41689387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 223 - 319
Target Start/End: Original strand, 42857051 - 42857148
Alignment:
Q  223 attttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcca 319  Q
    ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| || ||||| |||||||| | |||||||||||    
T  42857051 attttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagggactaattgtgtaattttgcca 42857148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 46143491 - 46143424
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| |  |||||||||||||| |||||| |||||| ||||||||    
T  46143491 ttttttcaaagaaatttgattttctaggctt-tatgatgaagatttacgtttgcctatgaatttgatga 46143424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 55742672 - 55742620
Alignment:
Q  267 gacgaaaatgttacctaaaattaagttaagagactaattatataattttgcca 319  Q
    ||||||||||||||||||||| |||||||| |||||||| | |||||||||||    
T  55742672 gacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcca 55742620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 315
Target Start/End: Complemental strand, 30799350 - 30799295
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataatttt 315  Q
    |||||| ||||||| |||||||||||||||||||||| |||||||| | |||||||    
T  30799350 gataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaatttt 30799295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 166
Target Start/End: Original strand, 37872901 - 37872956
Alignment:
Q  111 atttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||| | ||||||||||||||| |||||| ||| |||||||||||    
T  37872901 atttgattttctaggcttgtatgatgaagatttacgtttgcctacgagtttgatga 37872956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 49621565 - 49621632
Alignment:
Q  99 tttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||| ||||||||||||| || |   ||||||||||||||| |||||| |||||||||||||||    
T  49621565 tttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgcctatgagtttgatga 49621632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 50161337 - 50161274
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagttt 161  Q
    ||||||||| ||||||||||||| || | | ||||||||||||||| |||||| ||||||||||    
T  50161337 ttttttcaaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcctatgagttt 50161274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 43914688 - 43914746
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||||||||||||||||||   |||||||||||||||||| |||  ||||||||||||    
T  43914688 gataaaagacgaaaatgttattcaaaattaagttaagagacgaatcgtataattttgcc 43914746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 319
Target Start/End: Original strand, 21707847 - 21707949
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| |||| |||||||||||||||||||||| ||        ||||||  |||||| | ||||||||||| ||||||||||||||||| | ||||||||    
T  21707847 ttgtcatttaataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtattacctaaaataaagttaagagactaattgtgtaattttg 21707946  T
Q  317 cca 319  Q
    |||    
T  21707947 cca 21707949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 21053540 - 21053641
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||| ||||||||||||||||| ||        |||||| || |||| ||||||||||||| |||||||| |||||||| | ||||||||    
T  21053540 ttgtcattttataatataaaggactaaatcgtaacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 21053639  T
Q  317 cc 318  Q
    ||    
T  21053640 cc 21053641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 319
Target Start/End: Original strand, 26948252 - 26948300
Alignment:
Q  271 aaaatgttacctaaaattaagttaagagactaattatataattttgcca 319  Q
    |||||||||||| ||||||||||||| ||||||  ||||||||||||||    
T  26948252 aaaatgttacctgaaattaagttaagggactaaaaatataattttgcca 26948300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 49195791 - 49195723
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||| | | |||||| ||| |||||||||||||||| |||| | |||||||| |||||    
T  49195791 ttttttcaatgaaatataaatttctatgtttgtatgatgaagatttgagtttatttatgagttagatga 49195723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 318
Target Start/End: Complemental strand, 33369560 - 33369509
Alignment:
Q  267 gacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||||| ||||||||||||| |||||||| |||||||| | ||||||||||    
T  33369560 gacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 33369509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 303
Target Start/End: Complemental strand, 45655751 - 45655708
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaa 303  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||    
T  45655751 gataaaagacaaaattgttacctgaaattaagttaagagactaa 45655708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 316
Target Start/End: Complemental strand, 53232154 - 53232099
Alignment:
Q  261 ataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    ||||||||||||| | |||||||||||||||||||||||  |||| | ||||||||    
T  53232154 ataaaagacgaaagtattacctaaaattaagttaagagatgaattgtgtaattttg 53232099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 245
Target Start/End: Original strand, 55140426 - 55140469
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaa 245  Q
    |||||| |||||||| ||||||||||||| ||||||||||||||    
T  55140426 aaaaaggataactattttgttattttatagcataaaggactaaa 55140469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 21361440 - 21361498
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    |||||| ||| |||||||||| ||||||||||||||| ||||| |||| ||||| ||||    
T  21361440 gataaaggactaaaatgttacgtaaaattaagttaagggactatttatgtaattatgcc 21361498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 22071811 - 22071869
Alignment:
Q  105 aatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttga 163  Q
    |||||||||||| ||||| |||| |||||| ||||||||| | |||| |||||||||||    
T  22071811 aatgaaatttgagtttcttggtttgtatgacgaagatttgaggttgtttatgagtttga 22071869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 23549615 - 23549577
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaagga 240  Q
    |||||| ||||||||||||||||||||||||||| ||||    
T  23549615 aaaaaggataactatgttgttattttataacatagagga 23549577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 2686273 - 2686330
Alignment:
Q  261 ataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    |||||||| |||||||||| |||||||||||||||  || ||||| | ||||||||||    
T  2686273 ataaaagatgaaaatgttagctaaaattaagttaaaggattaattgtgtaattttgcc 2686330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 162
Target Start/End: Original strand, 8579069 - 8579134
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttg 162  Q
    ||||||||||||| ||  || ||| || ||| |||||||||||||||| |||||| ||||||||||    
T  8579069 attttttcaatgacatccgagtttttaagtttgtatgatgaagatttgagtttgtttatgagtttg 8579134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 162
Target Start/End: Original strand, 8593925 - 8593990
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttg 162  Q
    ||||||||||||| ||  || ||| || ||| |||||||||||||||| |||||| ||||||||||    
T  8593925 attttttcaatgacatccgagtttttaagtttgtatgatgaagatttgagtttgtttatgagtttg 8593990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 22335535 - 22335457
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaag 296  Q
    |||| |||||||||| ||||||| |||||||  ||       |||||||||||||| |||||||| |||||||||||||    
T  22335535 ttgtcattttataacgtaaaggaataaatcggaacacaaaaagataaaagacgaaagtgttacctgaaattaagttaag 22335457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 26876605 - 26876536
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||| |||||||||||||| ||| | |||| |||| ||||||| ||| |||||| |||||||| |||||    
T  26876605 attttatcaatgaaatttgagttttttggtttgtataatgaagacttgggtttgtttatgagttcgatga 26876536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 30799417 - 30799388
Alignment:
Q  223 attttataacataaaggactaaatcgttac 252  Q
    ||||||||||||||||||||||||||||||    
T  30799417 attttataacataaaggactaaatcgttac 30799388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 43914631 - 43914586
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagattt 143  Q
    ||||||||||||||| ||||||||||||  ||||| ||||||||||    
T  43914631 ttttttcaatgaaatctgattttctaggcaagtattatgaagattt 43914586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 46143559 - 46143616
Alignment:
Q  261 ataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||| ||||||| ||||||||||||| ||||||||  ||||||| | ||||||||||    
T  46143559 ataaaggacgaaagtgttacctaaaataaagttaaggcactaattgtgtaattttgcc 46143616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 246
Target Start/End: Complemental strand, 563610 - 563566
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaat 246  Q
    |||||| ||||||||||||  ||||||||||||||||||| ||||    
T  563610 aaaaaggataactatgttgacattttataacataaaggacaaaat 563566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 297
Target Start/End: Complemental strand, 2272360 - 2272324
Alignment:
Q  261 ataaaagacgaaaatgttacctaaaattaagttaaga 297  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  2272360 ataaaagacgaaattgttatctaaaattaagttaaga 2272324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 303
Target Start/End: Original strand, 23963111 - 23963147
Alignment:
Q  267 gacgaaaatgttacctaaaattaagttaagagactaa 303  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  23963111 gacgaaattgttacctaaaattaagttaagggactaa 23963147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 45655948 - 45656008
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    |||||| ||| ||| |||||||||||||||||||||| ||||||   | ||||||||||||    
T  45655948 gataaatgaccaaactgttacctaaaattaagttaagggactaaaagtgtaattttgccaa 45656008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 48419322 - 48419286
Alignment:
Q  213 ctatgttgttattttataacataaaggactaaatcgt 249  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  48419322 ctatgttgttattttataacataaatgactaactcgt 48419286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 303
Target Start/End: Complemental strand, 50512531 - 50512503
Alignment:
Q  275 tgttacctaaaattaagttaagagactaa 303  Q
    |||||||||||||||||||||||||||||    
T  50512531 tgttacctaaaattaagttaagagactaa 50512503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 9e-27; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 132270 - 132201
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  132270 attttttcaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatga 132201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 35362139 - 35362070
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  35362139 attttttcaatgaaatttgattttctaggctagtatgatgaagatttgtgtttgtctatgagtttgatga 35362070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 199 - 318
Target Start/End: Original strand, 25363241 - 25363361
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaaga 297  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||        |||||| ||||||||||||| |||||||||| |||||     
T  25363241 cataaaaaggataactatgttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttatctaaaattaaattaagg 25363340  T
Q  298 gactaattatataattttgcc 318  Q
     ||||||| | ||||||||||    
T  25363341 aactaattgtgtaattttgcc 25363361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 199 - 315
Target Start/End: Complemental strand, 35362038 - 35361922
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagag 298  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||        | ||| ||||||||||||||||||| ||||||||||      
T  35362038 cataaaaaggataactatgttgttattttataacataaaggactaaatcgttacaacaaaaaaaaaatgacgaaaatgttacctaaatttaagttaagga 35361939  T
Q  299 actaattatataatttt 315  Q
    ||||||| | |||||||    
T  35361938 actaattgtgtaatttt 35361922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 318
Target Start/End: Original strand, 7145774 - 7145884
Alignment:
Q  209 ataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattat 307  Q
    ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||||||||||||||||||||| |||||||| || |||||||    
T  7145774 ataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggattaattat 7145873  T
Q  308 ataattttgcc 318  Q
     ||||||||||    
T  7145874 gtaattttgcc 7145884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 199 - 320
Target Start/End: Complemental strand, 30370631 - 30370509
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaaga 297  Q
    ||||||||  ||||||||||||||||||||||||||||| ||||||||||| ||        |||||||||||||| ||||||||||||| ||||||||     
T  30370631 cataaaaaagataactatgttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaagg 30370532  T
Q  298 gactaattatataattttgccaa 320  Q
    |||||||| | ||||||||||||    
T  30370531 gactaattgtgtaattttgccaa 30370509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 32994368 - 32994299
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||    
T  32994368 attttttcaatgaaatttgattttcttgactagtatgatgaagatttgcgtttgtctatgagtttgatga 32994299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 319
Target Start/End: Complemental strand, 35363101 - 35362983
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||    
T  35363101 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaggataaaggacgaaagtgttacctaaaataaagttaagggac 35363002  T
Q  301 taattatataattttgcca 319  Q
    ||||| | |||||||||||    
T  35363001 taattgtgtaattttgcca 35362983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 202 - 318
Target Start/End: Complemental strand, 32936323 - 32936206
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||    
T  32936323 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagtgac 32936224  T
Q  301 taattatataattttgcc 318  Q
    ||||| | ||||||||||    
T  32936223 taattgtgtaattttgcc 32936206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 320
Target Start/End: Complemental strand, 18485776 - 18485657
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| |||||||||||||||||||||||||||||||||||||| || ||        |||||| ||||||| ||||||||||||| |||||||| |||    
T  18485776 aaaaaggataactatgttgttattttataacataaaggactaaattgtgacaacaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 18485677  T
Q  301 taattatataattttgccaa 320  Q
    ||||| | ||||||||||||    
T  18485676 taattgtgtaattttgccaa 18485657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 218 - 320
Target Start/End: Complemental strand, 27843124 - 27843021
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||| ||||||||||||||        |||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  27843124 ttgtcattttataacataaaagactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaagggactaattatgtaattttg 27843025  T
Q  317 ccaa 320  Q
    ||||    
T  27843024 ccaa 27843021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 15179011 - 15178942
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||||||||||||||||||| |  |||||||||||||||||| |||||||||||||||||||||    
T  15179011 attttttcaatgaaatttgattttcttgactagtatgatgaagatttgagtttgtctatgagtttgatga 15178942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 199 - 316
Target Start/End: Complemental strand, 32994279 - 32994164
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagag 298  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||        ||||| |||||||||||||  ||||||||||||||  |    
T  32994279 cataaaaaggataactatgttgttattttataacataaaagactaaatcgttacaaaaaa--ataaaggacgaaaatgttatttaaaattaagttaaacg 32994182  T
Q  299 actaattatataattttg 316  Q
    ||||||| | ||||||||    
T  32994181 actaattgtgtaattttg 32994164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 199 - 315
Target Start/End: Complemental strand, 132168 - 132048
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgtt----acnnnnnnngataaaagacgaaaatgttacctaaaattaagtta 294  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||    |        |||||| |||||||||||||||||||||||| |||    
T  132168 cataaaaaggataactatgttgttattttataacataaaggactaaatcgttaaaaaaaaaaaaagataaaggacgaaaatgttacctaaaattaaatta 132069  T
Q  295 agagactaattatataatttt 315  Q
    || || ||||| | |||||||    
T  132068 agggattaattgtgtaatttt 132048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 25363139 - 25363205
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttga 163  Q
    |||| ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||    
T  25363139 atttattcaatgaaatttgattttcttgactagtatgatgaagatttgcgtttgtctatgagtttga 25363205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 320
Target Start/End: Original strand, 40834164 - 40834283
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| | |||||||||||||||||||||||||||||||||||| || ||        |||||| ||||||| ||||||||||||| |||||||| |||    
T  40834164 aaaaaggacaactatgttgttattttataacataaaggactaaattgtgacaaagaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 40834263  T
Q  301 taattatataattttgccaa 320  Q
    ||||| | ||||||||||||    
T  40834264 taattgtgtaattttgccaa 40834283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 304
Target Start/End: Complemental strand, 15178909 - 15178803
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaaga 297  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||        |||||| ||||||||| ||| |||||||||||||||      
T  15178909 cataaaaaggataactatgttgttattttataacataaaagactaaatcgttacaaaaaaaagataaaggacgaaaatattatctaaaattaagttaaag 15178810  T
Q  298 gactaat 304  Q
    |||||||    
T  15178809 gactaat 15178803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 315
Target Start/End: Complemental strand, 3539708 - 3539600
Alignment:
Q  209 ataactatgttgttattttataacataaaggactaaatcgttac--nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaatta 306  Q
    |||||||||||||||||||||||||||||||||||||| || ||         |||||| ||||||||||||||||||||| |||||||| || |||||     
T  3539708 ataactatgttgttattttataacataaaggactaaattgtgacaaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggattaattg 3539609  T
Q  307 tataatttt 315  Q
    |||||||||    
T  3539608 tataatttt 3539600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 13600666 - 13600598
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||||| |||||||||||||| |||||||||||||||    
T  13600666 ttttttcaaagaaatttgattttctaggcttgtatgataaagatttgcgtttgcctatgagtttgatga 13600598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 319
Target Start/End: Original strand, 19558122 - 19558219
Alignment:
Q  223 attttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcca 319  Q
    ||||||||||||||||||||||||||||||        |||||| ||||||| |||||||||||||||||||||| |||||||| | |||||||||||    
T  19558122 attttataacataaaggactaaatcgttacagaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcca 19558219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 20769837 - 20769905
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||| |||||||||||||||| |||||||||||||||    
T  20769837 ttttttcaaagaaatttgattttctaggcttgtatgttgaagatttgcgtttgcctatgagtttgatga 20769905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 320
Target Start/End: Complemental strand, 25363111 - 25363014
Alignment:
Q  223 attttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    ||||||||||||||||||||||||||||||       |||||| ||||||| |||||||||||||||||||||| ||||  || | ||||||||||||    
T  25363111 attttataacataaaggactaaatcgttacaaaaaaagataaatgacgaaagtgttacctaaaattaagttaagggactgtttgtgtaattttgccaa 25363014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 40834061 - 40834129
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||| |||||| |||||||||||||||    
T  40834061 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 40834129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 320
Target Start/End: Original strand, 30370756 - 30370858
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgc 317  Q
    |||| ||||||||||||||||||||||||||| ||       |||||| ||||||| |||| |||||||| |||||||| |||||||| | |||||||||    
T  30370756 ttgtcattttataacataaaggactaaatcgtgacaaaaaaagataaaggacgaaagtgttgcctaaaataaagttaagggactaattgtgtaattttgc 30370855  T
Q  318 caa 320  Q
    |||    
T  30370856 caa 30370858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 2094793 - 2094725
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||| |||||| ||| |||||||||||    
T  2094793 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctacgagtttgatga 2094725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 3539817 - 3539749
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | |||||||||||||||  ||||| |||||||||||||||    
T  3539817 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttatgtttgcctatgagtttgatga 3539749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 35363204 - 35363136
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| ||||||||| |||||||| | ||||||||||||||| |||||| |||||||||||||||    
T  35363204 ttttttcaaagaaatttgactttctaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 35363136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 3539841 - 3539941
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgc 317  Q
    |||| ||||||||||||||||||||||||||| ||        ||||| ||||||| ||||||||||||| || ||| |||||||||| |||||||||||    
T  3539841 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaaataaaggacgaaagtgttacctaaaataaaattatgagactaattgtataattttgc 3539940  T
Q  318 c 318  Q
    |    
T  3539941 c 3539941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 318
Target Start/End: Original strand, 15179039 - 15179135
Alignment:
Q  223 attttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    |||||||||||||||||||||||||||||         |||||| ||||||| |||||||||||||||||||||| |||||||| | ||||||||||    
T  15179039 attttataacataaaggactaaatcgttaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 15179135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 318
Target Start/End: Original strand, 35362167 - 35362263
Alignment:
Q  223 attttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||||||||||||||||||||||||||||        |||||| |||||||  ||||||||||||||||||||| |||||||| | ||||||||||    
T  35362167 attttataacataaaggactaaatcgttacagaaaaaagataaaggacgaaagcgttacctaaaattaagttaagggactaattgtgtaattttgcc 35362263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 320
Target Start/End: Original strand, 32936450 - 32936553
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||||||| | ||||||||    
T  32936450 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 32936549  T
Q  317 ccaa 320  Q
    ||||    
T  32936550 ccaa 32936553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 318
Target Start/End: Complemental strand, 2094685 - 2094575
Alignment:
Q  209 ataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattat 307  Q
    |||||| |||||||||||||||||||||||||||||||||| ||        |||||| ||| ||| ||||||||||||| |||||||| || ||||| |    
T  2094685 ataactttgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggaccaaagtgttacctaaaataaagttaagggattaattgt 2094586  T
Q  308 ataattttgcc 318  Q
     ||||||||||    
T  2094585 gtaattttgcc 2094575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 318
Target Start/End: Complemental strand, 13600556 - 13600444
Alignment:
Q  209 ataactatgttgttattttataacataaaggactaaatcgttac---nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaatt 305  Q
    ||||||||||||||||||||||||||||||||||||||||| ||          |||||| ||||||| ||||||||||||| ||| |||  ||||||||    
T  13600556 ataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaaggtaaaggactaatt 13600457  T
Q  306 atataattttgcc 318  Q
     | ||||||||||    
T  13600456 gtgtaattttgcc 13600444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 7145663 - 7145731
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||| | | ||||||||||||||| ||||||  ||||||||||||||    
T  7145663 ttttttcaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcatatgagtttgatga 7145731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 18485880 - 18485812
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| ||||||| |||||||| | | ||||||||||||||| |||||| |||||||||||||||    
T  18485880 ttttttcaaagaaatttaattttctatgcttgtatgatgaagatttacgtttgcctatgagtttgatga 18485812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 20769940 - 20770056
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac--nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagaga 299  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||| ||         |||||| |||| || ||||||||||||| | |||||| ||    
T  20769940 aaaaaggataactatattgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacggaagtgttacctaaaataatgttaaggga 20770039  T
Q  300 ctaattatataattttg 316  Q
    |||||| | ||||||||    
T  20770040 ctaattgtgtaattttg 20770056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 30370731 - 30370663
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| ||||||||||||| || | | ||||||||||||||| |||||| |||||||||||||||    
T  30370731 ttttttcaaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcctatgagtttgatga 30370663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 40834037 - 40833936
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||||||| | ||||||||    
T  40834037 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 40833938  T
Q  317 cc 318  Q
    ||    
T  40833937 cc 40833936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 318
Target Start/End: Original strand, 13600695 - 13600791
Alignment:
Q  223 attttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||| ||| ||||||||||||||||| | ||||||||||    
T  13600695 attttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctacaataaagttaagagactaattgtgtaattttgcc 13600791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 42854830 - 42854897
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgat 164  Q
    |||||||||||||||| ||| ||| |||||| |||||||||||||||  |||||| ||||||||||||    
T  42854830 attttttcaatgaaatatgagtttataggtttgtatgatgaagatttaagtttgtttatgagtttgat 42854897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 320
Target Start/End: Complemental strand, 20769813 - 20769710
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| | ||||||||||| |||||||| |||||||| | ||||||||    
T  20769813 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtattacctaaaataaagttaagggactaattgtgtaattttg 20769714  T
Q  317 ccaa 320  Q
    ||||    
T  20769713 ccaa 20769710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 32994442 - 32994500
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    |||||| ||||||| |||||||||||||||||||||| |||||||| | ||||||||||    
T  32994442 gataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 32994500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 35363233 - 35363335
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn--gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataatttt 315  Q
    |||| ||||||||||||||||||||||||||| ||         |||||| ||||||| ||||||||||||| |||||||| |||||||| | |||||||    
T  35363233 ttgtcattttataacataaaggactaaatcgtgacaaaaaagaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 35363332  T
Q  316 gcc 318  Q
    |||    
T  35363333 gcc 35363335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 32458075 - 32458132
Alignment:
Q  261 ataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||| || ||||||||||||||||||||||||||| |||||||| | ||||||||||    
T  32458075 ataaaggatgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcc 32458132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 14274360 - 14274428
Alignment:
Q  99 tttttcaatgaaatttgattttcta-ggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||| ||||||||| ||| || |||| |||||||||||||||| |||||| ||||||||||||||    
T  14274360 tttttcaacgaaatttgagtttttaaggtttgtatgatgaagatttgagtttgtttatgagtttgatga 14274428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 32936426 - 32936358
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| ||||||||||||| || |   ||||||||||||||| |||||| |||||||||||||||    
T  32936426 ttttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgcctatgagtttgatga 32936358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 140
Target Start/End: Original strand, 27843146 - 27843189
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaaga 140  Q
    |||||| |||||||||||||||||||||||| ||||||||||||    
T  27843146 atttttccaatgaaatttgattttctaggtttgtatgatgaaga 27843189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 318
Target Start/End: Original strand, 37093734 - 37093789
Alignment:
Q  263 aaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||||||||| ||||||||||||| |||||||| |||||||| | ||||||||||    
T  37093734 aaaagacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 37093789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 320
Target Start/End: Original strand, 2094817 - 2094920
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||| ||||||||||||||||| ||        |||||| || |||| ||||||||||||| |||||||| |||||||| | ||||||||    
T  2094817 ttgtcattttataatataaaggactaaatcgtgacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 2094916  T
Q  317 ccaa 320  Q
    ||||    
T  2094917 ccaa 2094920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 12875924 - 12875982
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    |||||| ||| ||| ||||||||||||||||||||| |||||||  |||||||||||||    
T  12875924 gataaatgaccaaactgttacctaaaattaagttaaaagactaaaaatataattttgcc 12875982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 7601651 - 7601591
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    |||||| ||| ||| |||||||| ||||||||||||| ||||||  |||||||||||||||    
T  7601651 gataaaggaccaaactgttacctgaaattaagttaagggactaaaaatataattttgccaa 7601591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 17244404 - 17244348
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||||||||| ||| | |||||||||||||| ||||||||  |||||||||||||||    
T  17244404 gataaaagacaaaagtcttacctaaaattaaattaagagataaattatataattttg 17244348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 24858461 - 24858401
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    |||||| ||| ||| |||||||||||||||||||||| ||||||  || ||||||||||||    
T  24858461 gataaaggaccaaactgttacctaaaattaagttaagggactaaaaatgtaattttgccaa 24858401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 305
Target Start/End: Original strand, 18485904 - 18485992
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaatt 305  Q
    |||| ||||||||| ||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| ||||||||    
T  18485904 ttgtcattttataagataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaatt 18485992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 2467117 - 2467059
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    |||||| ||| ||| |||||||||||||||||||||| ||||||  || ||||||||||    
T  2467117 gataaaggaccaaactgttacctaaaattaagttaagggactaaaaatgtaattttgcc 2467059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 7145591 - 7145533
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    |||||| ||||||| ||||||||||||| |||||||| |||||||| | | ||||||||    
T  7145591 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgttattttgcc 7145533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 20339214 - 20339156
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    |||||| ||||||| ||||||||||||| |||||||| || ||||| | ||||||||||    
T  20339214 gataaaggacgaaagtgttacctaaaataaagttaagggattaattgtgtaattttgcc 20339156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 164
Target Start/End: Complemental strand, 27308295 - 27308229
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgat 164  Q
    ||||||||||||||| ||  |||||| ||| |||||||  ||||||| |||||| ||||||||||||    
T  27308295 ttttttcaatgaaatatgtatttctatgtttgtatgatatagatttgggtttgtttatgagtttgat 27308229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 29171489 - 29171436
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgt 151  Q
    |||||||||||||||| |||||| | ||||| |||||||||||||||| ||||||    
T  29171489 attttttcaatgaaatctgatttcc-aggtttgtatgatgaagatttgggtttgt 29171436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 132298 - 132327
Alignment:
Q  223 attttataacataaaggactaaatcgttac 252  Q
    ||||||||||||||||||||||||||||||    
T  132298 attttataacataaaggactaaatcgttac 132327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 13455945 - 13455990
Alignment:
Q  275 tgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    |||||||||||||||||||||| ||||||  || ||||||||||||    
T  13455945 tgttacctaaaattaagttaagggactaaaaatgtaattttgccaa 13455990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 27342877 - 27342808
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttg-cgtttgtctatgagtttgatga 166  Q
    |||||| |||||||| |||||||||| |||  |||||||||||||||   ||||| ||||||||||||||    
T  27342877 ttttttgaatgaaatatgattttctaagtttttatgatgaagatttgaaatttgtttatgagtttgatga 27342808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 32994396 - 32994425
Alignment:
Q  223 attttataacataaaggactaaatcgttac 252  Q
    ||||||||||||||||||||||||||||||    
T  32994396 attttataacataaaggactaaatcgttac 32994425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 7399814 - 7399758
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||||||||| ||||| |||| ||||||||||||||| |||||  ||| ||||||||    
T  7399814 gataaaagactaaaatattacttaaaattaagttaagggactatatatgtaattttg 7399758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 14729702 - 14729762
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    |||||| ||| ||| |||||| ||||||||||||||| ||||||  || ||||||||||||    
T  14729702 gataaaggaccaaactgttacttaaaattaagttaagggactaaaaatttaattttgccaa 14729762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 320
Target Start/End: Original strand, 19984534 - 19984578
Alignment:
Q  276 gttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    ||||||||||||||||||||| ||||||  || ||||||||||||    
T  19984534 gttacctaaaattaagttaagggactaaaaatgtaattttgccaa 19984578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 26065826 - 26065758
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||| ||  ||| || | | |||||||||||||||| |||||| |||||||| |||||    
T  26065826 ttttttcaatgaaatatgtatttttatgcttgtatgatgaagatttgagtttgtttatgagttcgatga 26065758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 202 - 318
Target Start/End: Complemental strand, 137033 - 136916
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||||||||||||||||||||| |||||||| |||    
T  137033 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggac 136934  T
Q  301 taattatataattttgcc 318  Q
    ||||| | ||||||||||    
T  136933 taattgtgtaattttgcc 136916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 137136 - 137068
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| ||||||||||||| || | | ||||||||||||||| |||||| |||| ||||||||||    
T  137136 ttttttcaaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcctataagtttgatga 137068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 137158 - 137259
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||| ||  |||||||||| ||||||||    
T  137158 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagtaaatggactaattatgtaattttg 137257  T
Q  317 cc 318  Q
    ||    
T  137258 cc 137259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 202 - 318
Target Start/End: Complemental strand, 330314 - 330197
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||||||||||||||||||||| |||||||| |||    
T  330314 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggac 330215  T
Q  301 taattatataattttgcc 318  Q
    ||||| | ||||||||||    
T  330214 taattgtgtaattttgcc 330197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 330417 - 330349
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| ||||||||||||| || | | ||||||||||||||| |||||| |||| ||||||||||    
T  330417 ttttttcaaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcctataagtttgatga 330349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 330439 - 330540
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||| ||  |||||||||| ||||||||    
T  330439 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagtaaatggactaattatgtaattttg 330538  T
Q  317 cc 318  Q
    ||    
T  330539 cc 330540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 27360350 - 27360467
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||||||||||||||||||||| |||||||| |||    
T  27360350 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggac 27360449  T
Q  301 taattatataattttgcc 318  Q
    ||||| | ||||||||||    
T  27360450 taattgtgtaattttgcc 27360467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 2318719 - 2318835
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagact 301  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||| ||       |||||| ||||||| ||||||||||||| |||||||| ||||    
T  2318719 aaaaaggataactatgttgttattttataacataaaagactaaatcgtgacaaaagaagataaaggacgaaagtgttacctaaaataaagttaagggact 2318818  T
Q  302 aattatataattttgcc 318  Q
    |||| | ||||||||||    
T  2318819 aattgtgtaattttgcc 2318835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 319
Target Start/End: Complemental strand, 20364087 - 20363969
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||||||||||||||||||||| || ||||| |||    
T  20364087 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaaattaagggac 20363988  T
Q  301 taattatataattttgcca 319  Q
    ||||| | |||||||||||    
T  20363987 taattgtgtaattttgcca 20363969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 17846236 - 17846353
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||    
T  17846236 aaaaaggataactatgttgttattttataacatataggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 17846335  T
Q  301 taattatataattttgcc 318  Q
    ||||| ||||||||||||    
T  17846336 taattgtataattttgcc 17846353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 18916853 - 18916970
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||        ||||||  |||||| ||||||||||||| |||||||| |||    
T  18916853 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtgttacctaaaataaagttaagggac 18916952  T
Q  301 taattatataattttgcc 318  Q
    ||||||| ||||||||||    
T  18916953 taattatgtaattttgcc 18916970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 30337550 - 30337617
Alignment:
Q  99 tttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||    
T  30337550 tttttcaatgaaatttgattttcttgaatagtatgatgaagatttgcgtttgtctatgagtttgatga 30337617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 5547301 - 5547232
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||| ||||||||    
T  5547301 attttttcaatgaaatttaattttctaggctagtatgatgaagatttgtgtttgtctatgaatttgatga 5547232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 305
Target Start/End: Complemental strand, 9319919 - 9319815
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||    
T  9319919 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 9319820  T
Q  301 taatt 305  Q
    |||||    
T  9319819 taatt 9319815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 320
Target Start/End: Complemental strand, 30337520 - 30337422
Alignment:
Q  223 attttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    ||||||||||||||||||||||||||||||        |||||| |||||||||||||||||||||||||||||  |||||||| | ||||||||||||    
T  30337520 attttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaatggactaattgtgtaattttgccaa 30337422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 318
Target Start/End: Original strand, 30337649 - 30337774
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttac------nnnnnnngataaaagacgaaaatgttacctaaaattaagt 292  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||             |||||| ||||| ||||||| ||||||||||||    
T  30337649 cataaaaaagataactatgttgttattttataacataaaggactaaatcgttacaaaaaaaaaaaaagataaaggacgataatgttatctaaaattaagt 30337748  T
Q  293 taagagactaattatataattttgcc 318  Q
    |||| |||||||| | ||||||||||    
T  30337749 taagggactaattctgtaattttgcc 30337774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 10044870 - 10044938
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | |||||||||||||||||||||| |||||| ||||||||    
T  10044870 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttgcgtttgcctatgaatttgatga 10044938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 10108939 - 10109007
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| ||||||| |||||||||| | |||||||||||||||||||||| |||||||||||||||    
T  10108939 ttttttcaaagaaatttaattttctaggcttgtatgatgaagatttgcgtttgcctatgagtttgatga 10109007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 20364191 - 20364123
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||| |||||| |||||||||||||||    
T  20364191 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 20364123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 27360246 - 27360314
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||| |||||| |||||||||||||||    
T  27360246 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 27360314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 2318617 - 2318685
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||| | | ||||||||||||||| |||||| |||||||||||||||    
T  2318617 ttttttcaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcctatgagtttgatga 2318685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 17846109 - 17846008
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||||||||||||||||| |||||||| |||||||| | ||||||||    
T  17846109 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttg 17846010  T
Q  317 cc 318  Q
    ||    
T  17846009 cc 17846008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 44536404 - 44536336
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||| | |||| |||||||||||||||    
T  44536404 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacatttgcctatgagtttgatga 44536336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 201 - 318
Target Start/End: Original strand, 601557 - 601678
Alignment:
Q  201 taaaaagtataactatgttgttattttataacataaaggactaaatcgttac----nnnnnnngataaaagacgaaaatgttacctaaaattaagttaag 296  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||| ||           |||||| ||| ||| ||||||||||||| ||||||||    
T  601557 taaaaaggataactatgttgttatttcataacataaaggactaaatcgtgacaaaaaaaataagataaaggacaaaagtgttacctaaaataaagttaag 601656  T
Q  297 agactaattatataattttgcc 318  Q
     |||||||| | ||||||||||    
T  601657 ggactaattgtgtaattttgcc 601678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 8322429 - 8322528
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgc 317  Q
    |||| ||||||||||||||||||||||||||| |        |||||| |||||||||||||||||||||||||||||| ||| |||| | |||||||||    
T  8322429 ttgtcattttataacataaaggactaaatcgtga-aaaaaaagataaaggacgaaaatgttacctaaaattaagttaagggacgaattctgtaattttgc 8322527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 5547198 - 5547148
Alignment:
Q  201 taaaaagtataactatgttgttattttataacataaaggactaaatcgtta 251  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  5547198 taaaaaggataactatgttgttattttataacataaaagactaaatcgtta 5547148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 8236905 - 8236835
Alignment:
Q  97 attttttcaatgaaatttgattttc-taggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||||||||| |||||||| ||| || |||||||||||||||| |||||| ||||||||||||||    
T  8236905 attttttcaatgaaatatgattttcctagatttgtatgatgaagatttgggtttgtttatgagtttgatga 8236835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 4261278 - 4261345
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||| ||||||||||| | |||||||||||||||||| ||| |||||||||||||||    
T  4261278 ttttttcaaagaaattagattttctaggcttgtatgatgaagatttgcg-ttgcctatgagtttgatga 4261345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 9320023 - 9319955
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||  | ||||||||||||||| |||||| ||||| |||||||||    
T  9320023 ttttttcaaagaaatttgattttctagacttgtatgatgaagatttacgtttgcctatgcgtttgatga 9319955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 9320047 - 9320148
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||||||| | ||||||||    
T  9320047 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 9320146  T
Q  317 cc 318  Q
    ||    
T  9320147 cc 9320148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 10108871 - 10108811
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    |||||||||||||| ||||||||||||| |||||||| |||||||| | ||||||||||||    
T  10108871 gataaaagacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgccaa 10108811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 17846133 - 17846201
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||  | ||||||||||||||| |||||| ||| |||||||||||    
T  17846133 ttttttcaaagaaatttgattttctagacttgtatgatgaagatttacgtttgcctaagagtttgatga 17846201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 18916726 - 18916625
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||||||| | ||||||||    
T  18916726 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 18916627  T
Q  317 cc 318  Q
    ||    
T  18916626 cc 18916625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 318
Target Start/End: Original strand, 4261388 - 4261501
Alignment:
Q  209 ataactatgttgttattttataacataaaggactaaatcgttac----nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaat 304  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||           |||||| ||||||| ||||||||||||| |||||||  |||||||    
T  4261388 ataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaacggactaat 4261487  T
Q  305 tatataattttgcc 318  Q
    | | ||||||||||    
T  4261488 tgtgtaattttgcc 4261501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 249
Target Start/End: Original strand, 10109043 - 10109090
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgt 249  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||    
T  10109043 aaaaaggataactatattgttattttataacataaaggactaaatcgt 10109090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 31770005 - 31769938
Alignment:
Q  99 tttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||||||||||| ||||| |  | |||||||||||||||| |||||| ||||||||||||||    
T  31770005 tttttcaatgaaatttgagtttcttgacttgtatgatgaagatttgggtttgtttatgagtttgatga 31769938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 305
Target Start/End: Complemental strand, 2318593 - 2318506
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaatt 305  Q
    |||| ||||||||||||||||||||||||||| ||        ||||| ||||||| ||||||||||||| |||||||| ||||||||    
T  2318593 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggactaatt 2318506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 160
Target Start/End: Complemental strand, 40044520 - 40044458
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtt 160  Q
    |||||| |||||||||||||||||| |||| ||||||||||||| || |||||| ||||||||    
T  40044520 tttttttaatgaaatttgattttctgggtttgtatgatgaagatctgagtttgtttatgagtt 40044458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 10044803 - 10044743
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    |||||| ||||||| ||||||||||||| |||||||| |||||||| | ||||||||||||    
T  10044803 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgccaa 10044743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 18916750 - 18916818
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| ||||||||||||| || |   ||||||||||||||| |||||| |||||||||||||||    
T  18916750 ttttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgcctatgagtttgatga 18916818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 5547339 - 5547393
Alignment:
Q  261 ataaaagacgaaaatgttacctaaaattaagttaagagactaattatataatttt 315  Q
    ||||| ||||||| |||||||||||||||||||||| |||||||| | |||||||    
T  5547339 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaatttt 5547393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 320
Target Start/End: Original strand, 20364215 - 20364318
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnnga-taaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        | |||| ||||||| ||||||||||||| |||||||  |||||||| | ||||||||    
T  20364215 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaaaggactaattgtgtaattttg 20364314  T
Q  317 ccaa 320  Q
    ||||    
T  20364315 ccaa 20364318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 1479287 - 1479332
Alignment:
Q  275 tgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    |||||||||||||||||||||||||||||   ||||||||||||||    
T  1479287 tgttacctaaaattaagttaagagactaaaagtataattttgccaa 1479332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 8322361 - 8322267
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaa 295  Q
    |||||| |||| |||||||| ||||||||||||||| ||||||||||  ||        |||||||||||||| |||||| ||||||||||||||    
T  8322361 aaaaaggataattatgttgtcattttataacataaatgactaaatcgggacaaaaaaaagataaaagacgaaagtgttacataaaattaagttaa 8322267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 27360176 - 27360119
Alignment:
Q  261 ataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||| ||||||||| ||||||||||| |||||||| |||||||| | ||||||||||    
T  27360176 ataaaggacgaaaatattacctaaaataaagttaagggactaattgtgtaattttgcc 27360119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 37084768 - 37084813
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagattt 143  Q
    ||||||||||||||| ||||||| |||||| |||||||||||||||    
T  37084768 ttttttcaatgaaatctgattttttaggtttgtatgatgaagattt 37084813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 10044981 - 10045021
Alignment:
Q  209 ataactatgttgttattttataacataaaggactaaatcgt 249  Q
    ||||||||||| |||||||||||||||||||| ||||||||    
T  10044981 ataactatgttattattttataacataaaggaataaatcgt 10045021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 22196194 - 22196234
Alignment:
Q  275 tgttacctaaaattaagttaagagactaattatataatttt 315  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  22196194 tgttacctaaaattaagttaagagactaaaaatataatttt 22196234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 43055869 - 43055821
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatc 247  Q
    ||||||||| |||||||||||| |||||||||||||||| || ||||||    
T  43055869 cataaaaaggataactatgttgatattttataacataaatgaataaatc 43055821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 44536301 - 44536265
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaag 238  Q
    |||||| ||||||||||||||||||||||||||||||    
T  44536301 aaaaaggataactatgttgttattttataacataaag 44536265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 303
Target Start/End: Original strand, 29154319 - 29154362
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaa 303  Q
    |||||||||| ||| |||||||||||||||||||||| ||||||    
T  29154319 gataaaagaccaaactgttacctaaaattaagttaagggactaa 29154362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 318
Target Start/End: Complemental strand, 21251072 - 21251026
Alignment:
Q  272 aaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||||||||||||||||||||||| || || |||| ||||||||||    
T  21251072 aaatgttacctaaaattaagttaagggaatatttatgtaattttgcc 21251026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 40044399 - 40044361
Alignment:
Q  209 ataactatgttgttattttataacataaaggactaaatc 247  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  40044399 ataactatgttgatattttataatataaaggactaaatc 40044361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 317
Target Start/End: Complemental strand, 3888929 - 3888872
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgc 317  Q
    |||||||||  ||| |||||||| ||||||||||||| ||||||  ||||||||||||    
T  3888929 gataaaagatcaaactgttacctgaaattaagttaagggactaaaaatataattttgc 3888872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 317
Target Start/End: Complemental strand, 5547148 - 5547103
Alignment:
Q  272 aaatgttacctaaaattaagttaagagactaattatataattttgc 317  Q
    |||||||| |||||||||||||||| |||||||| | |||||||||    
T  5547148 aaatgttatctaaaattaagttaagggactaattgtgtaattttgc 5547103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 317
Target Start/End: Complemental strand, 33274453 - 33274396
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgc 317  Q
    |||||||||| ||| |||||||| ||||||||||||| ||||||  || |||||||||    
T  33274453 gataaaagactaaactgttacctgaaattaagttaagggactaaaaatgtaattttgc 33274396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 318
Target Start/End: Complemental strand, 37084670 - 37084617
Alignment:
Q  265 aagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    |||||||||| ||||||| ||||||||||||  ||| |||||| ||||||||||    
T  37084670 aagacgaaaacgttacctgaaattaagttaaatgacaaattatgtaattttgcc 37084617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 37084880 - 37084917
Alignment:
Q  209 ataactatgttgttattttataacataaaggactaaat 246  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  37084880 ataactatgttgatattttataacataaaagactaaat 37084917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 601386 - 601326
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagtt-aagagactaattatataattttgcca 319  Q
    |||||| ||||||| ||||||||||||| ||||| |||||| ||||| | |||||||||||    
T  601386 gataaaggacgaaagtgttacctaaaataaagttaaagagattaattgtgtaattttgcca 601326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 601454 - 601522
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| ||||||||||||| ||   |  |||||||||||||| | |||| |||||||||||||||    
T  601454 ttttttcaaagaaatttgattttatatacttttatgatgaagatttacatttgcctatgagtttgatga 601522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 3322054 - 3321994
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    |||||| ||| ||| |||||||||||||||| ||||||||||||   | ||||||||||||    
T  3322054 gataaaggaccaaactgttacctaaaattaaattaagagactaaaactgtaattttgccaa 3321994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 43055944 - 43055892
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttg 150  Q
    ||||||||||||||| ||||||| |||||| |||| ||||| ||||| |||||    
T  43055944 ttttttcaatgaaatctgattttttaggtttgtataatgaaaatttgagtttg 43055892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 199 - 318
Target Start/End: Complemental strand, 12058 - 11940
Alignment:
Q  199 cataaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnngataaaag-acgaaaatgttacctaaaattaagttaaga 297  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||        | ||||| |||||||||||||||||||||||||||||     
T  12058 cataaaaaggataactatgttgttattttataacataaaggactaaatcgataccaaaaa--aaaaaagaacgaaaatgttacctaaaattaagttaagg 11961  T
Q  298 gactaattatataattttgcc 318  Q
    |||||||| | ||||||||||    
T  11960 gactaattgtgtaattttgcc 11940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 12159 - 12090
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||||||||||||||||||| || |||||| |||| ||||| |||||||||||||| |||||||    
T  12159 attttttcaatgaaatttgattttcttggctagtataatgatgatttccgtttgtctatgagcttgatga 12090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 12223 - 12279
Alignment:
Q  262 taaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    |||| ||||||| |||||||||||||||||||||| |||||||| | ||||||||||    
T  12223 taaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 12279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 9e-24; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 202 - 318
Target Start/End: Complemental strand, 23068813 - 23068696
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||    
T  23068813 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 23068714  T
Q  301 taattatataattttgcc 318  Q
    ||||| | ||||||||||    
T  23068713 taattgtgtaattttgcc 23068696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 33595548 - 33595665
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||    
T  33595548 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 33595647  T
Q  301 taattatataattttgcc 318  Q
    ||||| | ||||||||||    
T  33595648 taattgtgtaattttgcc 33595665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 320
Target Start/End: Original strand, 6755145 - 6755264
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||        ||||||  |||||| ||||||||||||| |||||||| |||    
T  6755145 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtgttacctaaaataaagttaagggac 6755244  T
Q  301 taattatataattttgccaa 320  Q
    ||||| | ||||||||||||    
T  6755245 taattgtgtaattttgccaa 6755264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 4243151 - 4243268
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||        |||||| ||| ||| ||||||||||||| |||||||| |||    
T  4243151 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaagggac 4243250  T
Q  301 taattatataattttgcc 318  Q
    ||||| | ||||||||||    
T  4243251 taattgtgtaattttgcc 4243268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 317
Target Start/End: Complemental strand, 3218268 - 3218152
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac-nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||         ||||| ||||||| ||||||||||||| |||||||| |||    
T  3218268 aaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggac 3218169  T
Q  301 taattatataattttgc 317  Q
    ||||| | |||||||||    
T  3218168 taattgtgtaattttgc 3218152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 3218362 - 3218294
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||| |||||| |||||||||||||||    
T  3218362 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 3218294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 4243048 - 4243116
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| ||||||||||||||||| || ||||||||||||||| |||||| |||||||||||||||    
T  4243048 ttttttcaaagaaatttgattttctagatttgtatgatgaagatttacgtttgcctatgagtttgatga 4243116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 6755042 - 6755110
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||| |||||| |||||||||||||||    
T  6755042 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcctatgagtttgatga 6755110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 10810198 - 10810129
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||||||||||||||||||||||| | ||| ||| ||||||||||||||| |||||| |||||||    
T  10810198 attttttcaatgaaatttgattttctagggttgtacgataaagatttgcgtttgtgtatgagattgatga 10810129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 14763534 - 14763653
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac---nnnnnnngataaaagacgaaaatgttacctaaaattaagttaagag 298  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||| ||          |||||| ||||||| | ||||||||||| |||||||| |    
T  14763534 aaaaaggataactatgttgttattttataacaaaaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtcttacctaaaataaagttaaggg 14763633  T
Q  299 actaattatataattttgcc 318  Q
    ||||||| | ||||||||||    
T  14763634 actaattgtgtaattttgcc 14763653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 20491586 - 20491530
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||    
T  20491586 gataaaagacgaaaatgttacctaaaattaagttaaaagacaaattatgtaattttg 20491530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 33595444 - 33595512
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | |||||||||||||||  ||||| |||||||||||||||    
T  33595444 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttatgtttgcctatgagtttgatga 33595512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 23068942 - 23069041
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnngataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgc 317  Q
    |||| |||||||||||||||| |||||||||| ||       |||||| ||||||| ||||||||||||| ||||||||||||||||| | |||||||||    
T  23068942 ttgtcattttataacataaag-actaaatcgtgacaaaaaaagataaatgacgaaagtgttacctaaaataaagttaagagactaattgtgtaattttgc 23069040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 320
Target Start/End: Original strand, 3922783 - 3922886
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||||||| | ||||||||    
T  3922783 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 3922882  T
Q  317 ccaa 320  Q
    ||||    
T  3922883 ccaa 3922886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 252
Target Start/End: Complemental strand, 10810094 - 10810044
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac 252  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  10810094 aaaaaggataactatgttgttattttataacataaatgactaaatcgttac 10810044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 3218385 - 3218486
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        |||||| ||||||| ||||||||||||| |||||||| |||||||| | ||||||||    
T  3218385 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 3218484  T
Q  317 cc 318  Q
    ||    
T  3218485 cc 3218486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 317
Target Start/End: Complemental strand, 33595420 - 33595320
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||||||| ||        ||||||  |||||||||||||||||||| |||||||| |||||||| | ||||||||    
T  33595420 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttg 33595321  T
Q  317 c 317  Q
    |    
T  33595320 c 33595320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 14763443 - 14763511
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtcta-tgagtttgatga 166  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||| |||||| ||| ||||||||||||    
T  14763443 ttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttg-ctattgagtttgatga 14763511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 318
Target Start/End: Complemental strand, 3922656 - 3922539
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagac 300  Q
    |||||| |||||| | || || ||||||||||||||||||||| |||| ||        |||||| ||||||| ||||||||||||| |||||||| |||    
T  3922656 aaaaaggataacttttttttttttttataacataaaggactaattcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggac 3922557  T
Q  301 taattatataattttgcc 318  Q
    ||||| | ||||||||||    
T  3922556 taattgtgtaattttgcc 3922539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 10026198 - 10026138
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    |||||| ||| |||| ||||||||||||||||||||| ||||| |||| ||||||||||||    
T  10026198 gataaaggactaaaacgttacctaaaattaagttaagggactatttatgtaattttgccaa 10026138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 10027124 - 10027181
Alignment:
Q  261 ataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    ||||| ||| |||||||||||||||||||||||||| ||||| |||| ||||| ||||    
T  10027124 ataaaggaccaaaatgttacctaaaattaagttaagggactatttatgtaattatgcc 10027181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 20491713 - 20491645
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||| |||||| |||  |||| |||| |||||||||| ||||| |||||| ||||||||||||||    
T  20491713 ttttttcagtgaaatatgaggttcttggtttgtatgatgaaaatttgggtttgtttatgagtttgatga 20491645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 23068918 - 23068850
Alignment:
Q  98 ttttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    ||||||||| ||||||||||||| || |   ||||||||||||||| |||||  |||||||||||||||    
T  23068918 ttttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgttttcctatgagtttgatga 23068850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 3922758 - 3922691
Alignment:
Q  99 tttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||| ||||||||||||| || |   |||||||||| |||| |||||| |||||||||||||||    
T  3922758 tttttcaaagaaatttgattttatatgcgtgtatgatgaaaatttacgtttgcctatgagtttgatga 3922691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 303
Target Start/End: Original strand, 13178479 - 13178522
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaa 303  Q
    |||||| ||| |||||||||||||||||||||||||| ||||||    
T  13178479 gataaaggaccaaaatgttacctaaaattaagttaagggactaa 13178522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 317
Target Start/End: Complemental strand, 14763419 - 14763319
Alignment:
Q  218 ttgttattttataacataaaggactaaatcgttacnnnnnnn-gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttg 316  Q
    |||| ||||||||||||||||||||||| ||| ||        ||||||  |||||| ||||||||||||| |||||||| |||| ||| ||||||||||    
T  14763419 ttgtcattttataacataaaggactaaaccgtgacaaaaaaaagataaagtacgaaagtgttacctaaaataaagttaagggactgattgtataattttg 14763320  T
Q  317 c 317  Q
    |    
T  14763319 c 14763319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 303
Target Start/End: Original strand, 20028029 - 20028072
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaa 303  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||    
T  20028029 gataaaagaccaaactgttacctgaaattaagttaagagactaa 20028072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 317
Target Start/End: Original strand, 5352541 - 5352587
Alignment:
Q  271 aaaatgttacctaaaattaagttaagagactaattatataattttgc 317  Q
    |||| |||| ||||||||||||||||||| || ||||||||||||||    
T  5352541 aaaacgttatctaaaattaagttaagagattatttatataattttgc 5352587  T

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Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 13853200 - 13853142
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgcc 318  Q
    |||||| ||| ||| |||||||| ||||||||||||| ||||||  |||||||||||||    
T  13853200 gataaatgaccaaattgttacctgaaattaagttaagggactaaaaatataattttgcc 13853142  T

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Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Complemental strand, 7920528 - 7920483
Alignment:
Q  275 tgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    ||||||||||||||||||||   |||||||||| ||||||||||||    
T  7920528 tgttacctaaaattaagttagaggactaattatgtaattttgccaa 7920483  T

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Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 3011955 - 3011911
Alignment:
Q  275 tgttacctaaaattaagttaagagactaattatataattttgcca 319  Q
    |||||||| ||||||||||||||||||||   |||||||||||||    
T  3011955 tgttacctgaaattaagttaagagactaaaagtataattttgcca 3011911  T

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Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 28852246 - 28852186
Alignment:
Q  260 gataaaagacgaaaatgttacctaaaattaagttaagagactaattatataattttgccaa 320  Q
    |||||| ||| ||| |||||||||||||||||||||| ||||||   | ||||||||||||    
T  28852246 gataaaggaccaaactgttacctaaaattaagttaagggactaaaagtgtaattttgccaa 28852186  T

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Target: scaffold1577 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold1577
Description:

Target: scaffold1577; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 252
Target Start/End: Complemental strand, 990 - 940
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaatcgttac 252  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  990 aaaaaggataactatgttgttattttataacataaaggactaaatcgttac 940  T

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Target: scaffold1577; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 1094 - 1025
Alignment:
Q  97 attttttcaatgaaatttgattttctaggttagtatgatgaagatttgcgtttgtctatgagtttgatga 166  Q
    |||||||||||||||| |||||||||||| | ||| ||| |||||||||||||||||||||  |||||||    
T  1094 attttttcaatgaaatgtgattttctagggttgtacgataaagatttgcgtttgtctatgaaattgatga 1025  T

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Target: scaffold0053 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 246
Target Start/End: Complemental strand, 15156 - 15112
Alignment:
Q  202 aaaaagtataactatgttgttattttataacataaaggactaaat 246  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||    
T  15156 aaaaaggataactatgttgatattttataacataaagaactaaat 15112  T

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Target: scaffold0053; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 295
Target Start/End: Complemental strand, 15094 - 15060
Alignment:
Q  261 ataaaagacgaaaatgttacctaaaattaagttaa 295  Q
    ||||| |||||||||||||||||||||||||||||    
T  15094 ataaatgacgaaaatgttacctaaaattaagttaa 15060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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