View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0592_low_26 (Length: 253)
Name: NF0592_low_26
Description: NF0592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0592_low_26 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 28 - 253
Target Start/End: Original strand, 45675382 - 45675607
Alignment:
| Q |
28 |
agaatttaattctgacatcatttgagagcaagtagaagtggaaccactagtacttggtatgaagcaaagtgaattgttgctgttggaatttggaggagat |
127 |
Q |
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| T |
45675382 |
agaatttaattctgacatcatttgagagcaagtagaagtggaaccactagtacttggtatgaagcaaagtgaagtgttgctgttggaatttggaggagat |
45675481 |
T |
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| Q |
128 |
agagtcatgttattgattccatagttaagttgttgaaaattgagatatgatcctcctcctaatccaaccatattatcacaaggtgtgaagcaattaactg |
227 |
Q |
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| T |
45675482 |
agagtcatgttattgattccatagttaagttgttgaaaattgagatatgatcctcctcctaatccaaccatattatcacaaggtatgaagcaattaaccg |
45675581 |
T |
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| Q |
228 |
agttgttgatttttgaattaatttca |
253 |
Q |
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| T |
45675582 |
agttgttgatttttgaattaatttca |
45675607 |
T |
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