View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0593_high_32 (Length: 330)
Name: NF0593_high_32
Description: NF0593
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0593_high_32 |
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Alignment Details
Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 38 - 320
Target Start/End: Original strand, 13169043 - 13169320
Alignment:
| Q |
38 |
acttcaagcttctcaagaaataaaactgatgaaacaacattgtgacaagctttcataaaggctcagttctacaagtttaagatttggggcacatgacaaa |
137 |
Q |
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| T |
13169043 |
acttcaagcttctcaagagatagaactgatgaatcaacattg-gacaagctttcataaaggcttagttctacaagtttaagatttggggcacaggacaaa |
13169141 |
T |
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| Q |
138 |
attggacactctttcataaaggcttttggattatgtaacaaaatgtaattgacagaaacagactgaacaagttagtgttatacatatatatgagttagtt |
237 |
Q |
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| T |
13169142 |
gtttgacactcttt----taggcttgttgattatgtaacaaaatgtaaatgacagaaacagactgaacaagttagtattatgcatatatatgagttagtt |
13169237 |
T |
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| Q |
238 |
agatcaatgtatttttagacagactaatttcttccacagattgtgcactgaacacaatatggtctttatctcaattctctctg |
320 |
Q |
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| T |
13169238 |
aaatcaatgtagttttaaacagactaatttcttccacagattgtgcactgaacactatatggtctttatctcaattctctctg |
13169320 |
T |
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