View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0593_high_64 (Length: 248)
Name: NF0593_high_64
Description: NF0593
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0593_high_64 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-128; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-128
Query Start/End: Original strand, 14 - 248
Target Start/End: Original strand, 8253452 - 8253686
Alignment:
| Q |
14 |
gaacaacctaatctttcgatcagcaaaagtataaatgaccaatctgaccttttagaacctgaattgggtgttcgcagagctctctctgaggggccatttc |
113 |
Q |
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| T |
8253452 |
gaacaacctaatctttcgatcagcaaaagtataaatgaccaatctgaccttttagaacctgaattgggtgttcgcagagctctctctgaggggccatttc |
8253551 |
T |
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| Q |
114 |
ctgtcgtacctagtttgtctgaaacacttgatgctaaatggacaggtgaaaaccagtcaggaatcggaactcaaaaggatagcacttctgtaaaccctga |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8253552 |
ctgtcgtacctagtttgtctgaaacacttgatgctaaatggacaggtgaaaaccagtcaggaatcggaactcaaaaggatagcacttctgtaaaccctga |
8253651 |
T |
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| Q |
214 |
tacatctaccgcagatgctctgacggccactgtac |
248 |
Q |
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||||||||| ||||||||||||||||||||||||| |
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| T |
8253652 |
tacatctacggcagatgctctgacggccactgtac |
8253686 |
T |
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