View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0593_low_73 (Length: 267)
Name: NF0593_low_73
Description: NF0593
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0593_low_73 |
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Alignment Details
Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 24 - 221
Target Start/End: Original strand, 31772220 - 31772417
Alignment:
| Q |
24 |
cagcacagatgggttagtggataaaggagttgaaggtttccctcctcagttacaacatattccaagtccctttttgccttacacatggaattctgcaatg |
123 |
Q |
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| T |
31772220 |
cagcacaaatgggttagtggataaaggagttgaaggtttccctcctcagttacaacatattccaagtccctttttgccttacacatggaattctgcaatg |
31772319 |
T |
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| Q |
124 |
cctcctcctaccttttgtccaccaaactatccattagcattctatactcccgtaactccacctgcatattggggttgtatgccgcctccatggaatat |
221 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
31772320 |
cctcctcctaccttttgtccaccaaactatccattagcattctatactcccgtaactccacctgcatattggggttgtatgccacctccatggaatat |
31772417 |
T |
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