View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0593_low_78 (Length: 258)
Name: NF0593_low_78
Description: NF0593
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0593_low_78 |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 12020346 - 12020113
Alignment:
| Q |
1 |
ttaccattggttctgattagtctttaaatttggtaccagttttagttaattaatttgtattactcagaaaaagcaaggaaccttgtatt----gtatctc |
96 |
Q |
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| T |
12020346 |
ttaccattggttctgattagtctttaaatttggtaccagttttagttaattaatttgtattactcagaaaaagcaaggaaccttgtattgtatgtatctc |
12020247 |
T |
|
| Q |
97 |
accggttttgttgtgtttgttcacttagtgattatgtatccacacaagaacctcgtacgtacctgactgcttttgtgtctatgttcattc-ttctttttt |
195 |
Q |
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|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |
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| T |
12020246 |
accggttttgttgtgtttgttcacttggtgattatatatccacacaagaacctcgtacgtacctgactgcttttgtgtccatgttcattctttctttttt |
12020147 |
T |
|
| Q |
196 |
gaaaaagcatgttcatttctccactaggtgtcat |
229 |
Q |
| |
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|||||||||||||||||||||||||||||||||| |
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| T |
12020146 |
gaaaaagcatgttcatttctccactaggtgtcat |
12020113 |
T |
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