View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0593_low_81 (Length: 252)
Name: NF0593_low_81
Description: NF0593
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0593_low_81 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 12 - 252
Target Start/End: Complemental strand, 29292313 - 29292073
Alignment:
| Q |
12 |
acagaccacttgacaagttatgtcatcttaaaggtatatttgaaatcaatggtagatcatttatctcctttatatggcaattctggtttgaaggctgtaa |
111 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29292313 |
acagaccacttgacaagttatgtcatcttaaaggtatatttgaaatcaatggtagatcatttatctcctttatatggcaattctggtttgaaggctgtaa |
29292214 |
T |
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| Q |
112 |
tcctaaataaatgaacactgtgcaggcactggatcaattctgtcaatgtcaaagtgtgaatattgacaaattcatcgataaaactatgcttattctgctt |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29292213 |
tcctaaataaatgaacactgtgcaggcactggatcaattctgtcaatgtcaaagtgtgaatattgacaaattcatcgataaaactatgcttattctgctt |
29292114 |
T |
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| Q |
212 |
aaatatgctcaacttgatcttgacttaacagacagtatgcc |
252 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
29292113 |
aaatatgctcaacttgatcttgacttaacagacagtatgcc |
29292073 |
T |
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