View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0594_high_1 (Length: 809)
Name: NF0594_high_1
Description: NF0594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0594_high_1 |
 | |
|
| [»] scaffold0329 (1 HSPs) |
| | |
|
| [»] scaffold0164 (1 HSPs) |
| | |
|
| [»] scaffold1416 (1 HSPs) |
| | |
|
| [»] scaffold1049 (1 HSPs) |
| | |
|
| [»] scaffold0006 (1 HSPs) |
| | |
|
| [»] scaffold0037 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 614; Significance: 0; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 614; E-Value: 0
Query Start/End: Original strand, 104 - 796
Target Start/End: Complemental strand, 19814783 - 19814086
Alignment:
| Q |
104 |
cccaaaggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagacc |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |
|
|
| T |
19814783 |
cccaaaggcatcattcatcatagatcttgtgttgaaacacctaagtaaaatgctagagttgaaaggaagcaccgacatattcttaatgtagccagagccc |
19814684 |
T |
|
| Q |
204 |
ttctttttcaatccaaactccccaaacaattttggtgttatgctctcaatcatacatttttcttgattaatagagtttctactcctttacttgaccatca |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
19814683 |
ttctttttcaatccaaactccccaaacaattttggtgttatgctctcaatcatacatttttcttgattaatagagtttctactcctttacttgactatca |
19814584 |
T |
|
| Q |
304 |
aactccttatcaaattttataagactctttgcctgatatcaaactttttaaag-----tgtttggatctctgtgttatgcttccacaatcacttcccaaa |
398 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19814583 |
aactccttatcaaattttataagactctttacctgatatcaaactttttaaagctaagtgtttggatctctgtgttatgcttccacaatcacttcccaaa |
19814484 |
T |
|
| Q |
399 |
gatctaaacttgaccctagagctagaaaatgttgtttcttggggtacaagtcaggttttaaagggtctgtgcttttttatttacattctagagaaatatt |
498 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||| |
|
|
| T |
19814483 |
gatctaaacttgaccctagagctagaaaatgttgtttcttggggtacaagtcaggttttaaagagtctgtgcttttttatttacattcttgacaaatatt |
19814384 |
T |
|
| Q |
499 |
catttctagaaatgttgttttccatgatcatatacttccttatccttcttcttttgtgaagaatttggaatattttccattttcttcatctcagttatct |
598 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19814383 |
catttctaaaaatgttgttttccatgatcatatacttccttgtccttcttcttttgtgaagaatttggaatattttccattttcttcatctcagttatct |
19814284 |
T |
|
| Q |
599 |
ccttcatcatctgtttcacctaaaacctctcatatttcttctgccttcattgacactattgttgagtcttctcccagaaaatcctcaagaactaagcatc |
698 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
19814283 |
ccttcatcatctgtttcacctaaaacctctcctatttctccttccttcattgacactattgttgagtcttctaccagaaaatcctcaagaactaagcatc |
19814184 |
T |
|
| Q |
699 |
caccaccacatctcaaagactatgtttgccactcatcatcttctaatactatcaatacttatcctatttgcaatattctgtcatataataaactgtct |
796 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
19814183 |
caccaccacatctcaaagactatgtttgccactcatcatcttctaatactatcaatacttatcctatttccaattttctgtcatataataaactgtct |
19814086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 113 - 591
Target Start/End: Original strand, 18476244 - 18476720
Alignment:
| Q |
113 |
atcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagaccttctttttc |
212 |
Q |
| |
|
|||||||||||||| ||||||||| || |||| ||| ||||||||||| ||||| | |||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
18476244 |
atcattcatcataggtcttgtgtttaa-caccccagcaaaatgctagatttgaatgaaagcaccaacatatccttaatgtagccagagctcttctttttc |
18476342 |
T |
|
| Q |
213 |
aatccaaactccccaaacaattttggtgttatgctctcaatcatacatttttcttgattaatagagtttctactcctttacttgaccatcaaactcctta |
312 |
Q |
| |
|
|||||||||| || ||||| ||||||||||||| | ||| ||||||| |||| ||||| ||||||||||||||||| ||||||| || |||| |||| |
|
|
| T |
18476343 |
aatccaaacttcctaaacagttttggtgttatgatgtcagtcatacagtttttttgataaatagagtttctactcccttacttggtcacaaaaccccttg |
18476442 |
T |
|
| Q |
313 |
tcaaattttataagactctttgcctgatatcaaactttttaaagtgtttggatctctgtgttatgcttccacaatcacttcccaaagatctaaacttgac |
412 |
Q |
| |
|
|||| || | || ||| | || ||| |||| ||| |||||||||||||||||||||| |||||||||||||||||| || |||| ||||||||||||| |
|
|
| T |
18476443 |
tcaacttatctatgacacattacctaatattaaaatttttaaagtgtttggatctctttgttatgcttccacaatcctatctcaaa-atctaaacttgac |
18476541 |
T |
|
| Q |
413 |
cctagagctagaaaatgttgtttcttggggtacaagtcaggttttaaagggtctgtgcttttttatttacattctagagaaatattcatttctagaaatg |
512 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||||||| |||||||| | |||||| ||| |||| |||||||||||||||||||| | |||||||| |
|
|
| T |
18476542 |
cctagagctagaaaatgttgtttcttaggttacaagtcagactttaaaggttttgtgctctttaatttgcattctagagaaatattcatctatagaaatg |
18476641 |
T |
|
| Q |
513 |
ttgttttccatgatcatatacttccttatccttcttcttttgtgaagaatttggaatattttccattttcttcatctca |
591 |
Q |
| |
|
| | || ||||||||||| |||||||||||| |||||| |||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
18476642 |
tcatctttcatgatcatattcttccttatcctacttcttcaatgaagaatttggaataatttccattttctccatctca |
18476720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 231 - 586
Target Start/End: Original strand, 3003669 - 3004024
Alignment:
| Q |
231 |
aattttggtgttatgctctcaatcatacatttttcttgattaatagagtttctactcctttacttgaccatcaaactccttatcaaattttataagactc |
330 |
Q |
| |
|
||||||||||||||||| ||| |||| | ||||| | ||||| |||||||||||||||||||||| || |||| ||||||||| | | || || || |
|
|
| T |
3003669 |
aattttggtgttatgctgtcagtcatgctgttttccttattaacagagtttctactcctttacttggtcacaaaacaccttatcaactcctgtatgattc |
3003768 |
T |
|
| Q |
331 |
tttgcctgatatcaaactttttaaagtgtttggatctctgtgttatgcttccacaatcacttcccaaagatctaaacttgaccctagagctagaaaatgt |
430 |
Q |
| |
|
||| |||||| | ||||| |||||||| ||||| || || || ||||| || || || || || | |||||||||||||| |||||| ||||||||| |
|
|
| T |
3003769 |
tttacctgatcttaaactctttaaagtttttggttcactttgctatgcctctactatattgtctcacatatctaaacttgaccatagagccagaaaatgt |
3003868 |
T |
|
| Q |
431 |
tgtttcttggggtacaagtcaggttttaaagggtctgtgcttttttatttacattctagagaaatattcatttctagaaatgttgttttccatgatcata |
530 |
Q |
| |
|
|||||||| || |||||||||||||| || || | ||| |||||| ||||||||||||||||||| || || ||||||||||| |||| |||||||||| |
|
|
| T |
3003869 |
tgtttcttaggctacaagtcaggtttcaagggttttgttctttttgatttacattctagagaaatctttatctctagaaatgtaatttttcatgatcata |
3003968 |
T |
|
| Q |
531 |
tacttccttatccttcttcttttgtgaagaatttggaatattttccattttcttca |
586 |
Q |
| |
|
| |||||||||||| |||| | || |||||||||||||||||||| ||||||||| |
|
|
| T |
3003969 |
ttcttccttatcctccttcatctgaaaagaatttggaatattttcctttttcttca |
3004024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 3003570 - 3003655
Alignment:
| Q |
107 |
aaaggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgt |
192 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||| || ||||||||||| |||||||| |
|
|
| T |
3003570 |
aaaggcattattcatcatagatcttgtgttgaaacacctcaacaaaatgccagagttgaaagaaaacaccaacatatccttaatgt |
3003655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 660 - 757
Target Start/End: Original strand, 18476801 - 18476898
Alignment:
| Q |
660 |
ttgagtcttctcccagaaaatcctcaagaactaagcatccaccaccacatctcaaagactatgtttgccactcatcatcttctaatactatcaatact |
757 |
Q |
| |
|
|||||||||| |||||||||| || ||| ||||||||||||||||||||||||||| ||| ||||||| | ||||||||||| ||| | |||||| |
|
|
| T |
18476801 |
ttgagtcttccaccagaaaatcttcttgaattaagcatccaccaccacatctcaaagattatatttgccatccttcatcttctaacactgttaatact |
18476898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 222
Target Start/End: Original strand, 8849880 - 8849985
Alignment:
| Q |
117 |
ttcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagaccttctttttcaatc |
216 |
Q |
| |
|
||||||||| ||||||||||| || | ||| |||||| ||| |||||||| || ||||||||||| |||||||||| |||| |||||| | |||||| |
|
|
| T |
8849880 |
ttcatcataagtcttgtgttgagacccatcaacaaaatggtagggttgaaagaaaacaccaacatatccttaatgtaggtagagtccttctatatcaatc |
8849979 |
T |
|
| Q |
217 |
caaact |
222 |
Q |
| |
|
|||||| |
|
|
| T |
8849980 |
caaact |
8849985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 222
Target Start/End: Original strand, 19653599 - 19653716
Alignment:
| Q |
105 |
ccaaaggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagacct |
204 |
Q |
| |
|
|||| ||||| || |||||||| || |||||||||||||| || | |||| |||||||||||| || || ||||| ||||||||||| | |||| ||| |
|
|
| T |
19653599 |
ccaagggcattatacatcataggtcatgtgttgaaacaccacaacagaatggtagagttgaaagaaaacatcaacacattcttaatgtgggtagagccct |
19653698 |
T |
|
| Q |
205 |
tctttttcaatccaaact |
222 |
Q |
| |
|
|||| |||||||||||| |
|
|
| T |
19653699 |
cctttatcaatccaaact |
19653716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 26085338 - 26085253
Alignment:
| Q |
107 |
aaaggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgt |
192 |
Q |
| |
|
||||||||||||||||| || ||||||||||| || ||||| |||||| || || ||||||||||| |||||||| |||||||| |
|
|
| T |
26085338 |
aaaggcatcattcatcaaaggtcttgtgttgagactcctcaacaaaatggtattgtagaaaggaagcatcaacatatccttaatgt |
26085253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 26109125 - 26109040
Alignment:
| Q |
107 |
aaaggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgt |
192 |
Q |
| |
|
||||||||||||||||| || ||||||||||| || ||||| |||||| || || ||||||||||| |||||||| |||||||| |
|
|
| T |
26109125 |
aaaggcatcattcatcaaaggtcttgtgttgagactcctcaacaaaatggtattgtagaaaggaagcatcaacatatccttaatgt |
26109040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 402 - 525
Target Start/End: Complemental strand, 38847091 - 38846968
Alignment:
| Q |
402 |
ctaaacttgaccctagagctagaaaatgttgtttcttggggtacaagtcaggttttaaagggtctgtgcttttttatttacattctagagaaatattcat |
501 |
Q |
| |
|
|||||||||| ||||||| ||||| | | ||||||||| |||||||||||||| ||||| ||||| | | | |||| || |||||||||| || || |
|
|
| T |
38847091 |
ctaaacttgaaactagagccagaaagtctgttttcttgggatacaagtcaggtttcaaaggctctgttttatatgatttgcacactagagaaatttttat |
38846992 |
T |
|
| Q |
502 |
ttctagaaatgttgttttccatga |
525 |
Q |
| |
|
||| ||| |||||||||| ||||| |
|
|
| T |
38846991 |
ttccagacatgttgtttttcatga |
38846968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 169; Significance: 3e-90; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 107 - 586
Target Start/End: Complemental strand, 37738899 - 37738420
Alignment:
| Q |
107 |
aaaggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagaccttc |
206 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||| || ||||||||||| |||||||| || |||| | || |
|
|
| T |
37738899 |
aaaggcattattcatcatagatcttgtgttgaaacacctcaacaaaatgccagagttgaaagaaaacaccaacatatccttaatgtggcaagag-cttta |
37738801 |
T |
|
| Q |
207 |
tt-tttcaatccaaactccccaaacaattttggtgttatgctctcaatcatacatttttcttgattaatagagtttctactcctttacttgaccatcaaa |
305 |
Q |
| |
|
|| |||||||| ||||| || ||||||||||||||||||||| ||| |||| | ||||| | ||||| |||||||||||||||||||||| || ||| |
|
|
| T |
37738800 |
ttgtttcaatctaaacttccaaaacaattttggtgttatgctgtcagtcatgctgttttccttattaacagagtttctactcctttacttggtcacaaaa |
37738701 |
T |
|
| Q |
306 |
ctccttatcaaattttataagactctttgcctgatatcaaactttttaaagtgtttggatctctgtgttatgcttccacaatcacttcccaaagatctaa |
405 |
Q |
| |
|
| ||||||||| | | || || ||||| |||||| | ||||| |||||||| ||||| || || || ||||| || || || || || |||||||| |
|
|
| T |
37738700 |
caccttatcaactcctgtatgattctttacctgatcttaaactctttaaagtttttggttcactttgctatgcctctactatattgtctcacagatctaa |
37738601 |
T |
|
| Q |
406 |
acttgaccctagagctagaaaatgttgtttcttggggtacaagtcaggttttaaagggtctgtgcttttttatttacattctagagaaatattcatttct |
505 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| || ||||| |||||||| || || | ||| |||||| ||||||||||||||||||| || || ||| |
|
|
| T |
37738600 |
acttgaccctagagccagaaaatgttgtttcttaggctacaaatcaggtttcaagggttttgttctttttgatttacattctagagaaatctttatctct |
37738501 |
T |
|
| Q |
506 |
agaaatgttgttttccatgatcatatacttccttatccttcttcttttgtgaagaatttggaatattttccattttcttca |
586 |
Q |
| |
|
|||||||| |||| ||||||||||| |||||||||||| |||| | || |||||||||||||||||||| ||||||||| |
|
|
| T |
37738500 |
agaaatgtaatttttcatgatcatattcttccttatcctccttcatctgaaaagaatttggaatattttcctttttcttca |
37738420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 485 - 757
Target Start/End: Complemental strand, 9803525 - 9803238
Alignment:
| Q |
485 |
tctagagaaatattcatttctagaaatgttgttttccatgatcatatacttccttatccttcttcttttgtgaagaatttggaatattttccattttctt |
584 |
Q |
| |
|
|||||||| |||||||| |||||||||||| | || ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
9803525 |
tctagagagatattcatctctagaaatgttatatttcatgaccatatacttccttatccttcttcttctgtgaagaatttggaatattttccattttctt |
9803426 |
T |
|
| Q |
585 |
catctcagttatctccttcatcatctgtttcacctaaaacctctcatatttctt---------------ctgccttcattgacactattgttgagtcttc |
669 |
Q |
| |
|
||||||||| ||| ||||||||| ||| || | | || | |||| ||||||| || | |||||| ||| || | ||||||||| |
|
|
| T |
9803425 |
catctcagtcttctacttcatcatttgtctcccttgaaccatctcccatttcttcatctcctcttcctccttctttcatttacaatactcctgagtcttc |
9803326 |
T |
|
| Q |
670 |
tcccagaaaatcctcaagaactaagcatccaccaccacatctcaaagactatgtttgccactcatcatcttctaatactatcaatact |
757 |
Q |
| |
|
|||||||||| ||||||||||||||||| | |||||||||||||| ||||||| ||| |||||||||||||||||| | |||||| |
|
|
| T |
9803325 |
gaccagaaaatcttcaagaactaagcatccgctaccacatctcaaaggttatgtttcccattcatcatcttctaatactgtaaatact |
9803238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 209 - 531
Target Start/End: Original strand, 6530975 - 6531297
Alignment:
| Q |
209 |
tttcaatccaaactccccaaacaattttggtgttatgctctcaatcatac-atttttcttgattaatagagtttctactcctttacttgaccatcaaact |
307 |
Q |
| |
|
||||| || ||||| || ||||| ||||||| ||||||| |||||||| | | |||||| ||| ||||||||||| ||||||||||||||| ||| | |
|
|
| T |
6530975 |
tttcagtctaaacttcctaaacatttttggtcttatgctgtcaatcatgctacttttct-gatcaatagagtttccactcctttacttgacaatctttcc |
6531073 |
T |
|
| Q |
308 |
ccttatcaaattttataagactctttgcctgatatcaaactttttaaagtgtttggatctctgtgttatgcttccacaatcacttcccaaagatctaaac |
407 |
Q |
| |
|
|| ||||| ||||||| || ||| | ||||||||||| ||||||||| ||| | || || |||||||||||||| | | || ||||| |||| |
|
|
| T |
6531074 |
ccatatcaggttttatatgattctctacctgatatcaacacttttaaagtttttcgttccctttgttatgcttccactcttcaggctcatagatcaaaac |
6531173 |
T |
|
| Q |
408 |
ttgaccctagagctagaaaatgttgtttcttggggtacaagtcaggttttaaagggtctgtgcttttttatttacattctagagaaatattcatttctag |
507 |
Q |
| |
|
|||| ||||||| ||||||| | ||||||||| |||||||||||||| ||||| ||| |||| | |||| |||| |||||||| | |||||||| |
|
|
| T |
6531174 |
ttgattctagagccagaaaatttgttttcttgggatacaagtcaggtttcaaaggtgttgttctttatgatttgaattcgagagaaattgttatttctag |
6531273 |
T |
|
| Q |
508 |
aaatgttgttttccatgatcatat |
531 |
Q |
| |
|
| |||| ||| ||||||||||| |
|
|
| T |
6531274 |
acatgtcacttttcatgatcatat |
6531297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 52777891 - 52777969
Alignment:
| Q |
116 |
attcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtag |
194 |
Q |
| |
|
|||||||| | ||||||||||||||| || || |||||| |||||| |||||||| |||||||||||||| ||||||| |
|
|
| T |
52777891 |
attcatcaaaaatcttgtgttgaaactccccaacaaaatggtagagtagaaaggaaacaccaacatattctcaatgtag |
52777969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 49641135 - 49641043
Alignment:
| Q |
130 |
ttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagaccttctttttcaatccaaact |
222 |
Q |
| |
|
|||||||||||| || || |||||| ||||||||||||||||| ||||||||||||||||| || |||| || ||||| ||||| ||||| |
|
|
| T |
49641135 |
ttgtgttgaaactccccaacaaaatgggagagttgaaaggaagcatcaacatattcttaatgttgctagagctctgcttttccaatcaaaact |
49641043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 162; Significance: 5e-86; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 107 - 586
Target Start/End: Original strand, 23680843 - 23681322
Alignment:
| Q |
107 |
aaaggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagaccttc |
206 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||| || || |||||||| |||||||| || |||| | || |
|
|
| T |
23680843 |
aaaggcattattcatcatagatcttgtgttgaaacacctcaacaaaatgccagagttgaaagaaaacatcaacatatccttaatgtggcaagag-cttta |
23680941 |
T |
|
| Q |
207 |
tt-tttcaatccaaactccccaaacaattttggtgttatgctctcaatcataca-tttttcttgattaatagagtttctactcctttacttgaccatcaa |
304 |
Q |
| |
|
|| |||||||| ||||| || ||||||||||||||||||||| ||| |||| | |||||||| ||||| |||||||||||||||||||||| || || |
|
|
| T |
23680942 |
ttgtttcaatctaaacttccaaaacaattttggtgttatgctgtcagtcatgctgtttttctt-attaacagagtttctactcctttacttggtcacaaa |
23681040 |
T |
|
| Q |
305 |
actccttatcaaattttataagactctttgcctgatatcaaactttttaaagtgtttggatctctgtgttatgcttccacaatcacttcccaaagatcta |
404 |
Q |
| |
|
|| ||||||||| | | || || ||||| ||||| | ||||| |||||||| ||||| ||||| || |||||||| || || || || ||||||| |
|
|
| T |
23681041 |
acaccttatcaactcctgtatgattctttacctgaccttaaactctttaaagtttttggttctctttgctatgcttctactatattgtctcacagatcta |
23681140 |
T |
|
| Q |
405 |
aacttgaccctagagctagaaaatgttgtttcttggggtacaagtcaggttttaaagggtctgtgcttttttatttacattctagagaaatattcatttc |
504 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| || |||||||||||||| || || | ||| |||||| || |||||||||||||||| || || || |
|
|
| T |
23681141 |
aacttgaccctagagccagaaaatgttgtttcttaggctacaagtcaggtttcaagggttttgttctttttgatctacattctagagaaatctttatctc |
23681240 |
T |
|
| Q |
505 |
tagaaatgttgttttccatgatcatatacttccttatccttcttcttttgtgaagaatttggaatattttccattttcttca |
586 |
Q |
| |
|
||||||| | |||| ||||||||||| |||||||||||| |||| | || |||||||||||||||||||| ||||||||| |
|
|
| T |
23681241 |
tagaaatataatttttcatgatcatattcttccttatcctccttcatctgacaagaatttggaatattttcctttttcttca |
23681322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 34890929 - 34890834
Alignment:
| Q |
130 |
ttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagaccttctttttcaatccaaactccc |
225 |
Q |
| |
|
|||||||||||||||||| |||||| ||||||||||| || ||||| |||||||| ||||| | ||||| ||||||||| |||||||||||||| |
|
|
| T |
34890929 |
ttgtgttgaaacacctcaacaaaatgtcagagttgaaagaaaacaccagcatattctaaatgttggcagagcccttcttttccaatccaaactccc |
34890834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 414 - 525
Target Start/End: Complemental strand, 20483460 - 20483349
Alignment:
| Q |
414 |
ctagagctagaaaatgttgtttcttggggtacaagtcaggttttaaagggtctgtgcttttttatttacattctagagaaatattcatttctagaaatgt |
513 |
Q |
| |
|
||||||| ||||| ||| |||||| || |||||||| || || ||||| || || |||||| |||||||||| |||||||| || |||| |||||||| |
|
|
| T |
20483460 |
ctagagccagaaagtgtattttcttaggttacaagtctggattcaaaggttcagttctttttgatttacattccagagaaatctttgtttccagaaatgt |
20483361 |
T |
|
| Q |
514 |
tgttttccatga |
525 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
20483360 |
tgtttttcatga |
20483349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 228
Target Start/End: Complemental strand, 20483767 - 20483646
Alignment:
| Q |
107 |
aaaggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagaccttc |
206 |
Q |
| |
|
||||||||||||||||| ||| ||||||| ||||||||| | ||||||||||||| || || || || ||||| ||||| ||||| || |||| | || |
|
|
| T |
20483767 |
aaaggcatcattcatcaaagagcttgtgtagaaacacctgaacaaaatgctagagtagagagaaaacatcaacacattctcaatgttgctagag-ctttg |
20483669 |
T |
|
| Q |
207 |
tt-tttcaatccaaactccccaa |
228 |
Q |
| |
|
|| |||||||||||||| ||||| |
|
|
| T |
20483668 |
ttgtttcaatccaaacttcccaa |
20483646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 228
Target Start/End: Original strand, 28017417 - 28017538
Alignment:
| Q |
107 |
aaaggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagaccttc |
206 |
Q |
| |
|
||||||||||||||||| ||| ||||||| ||||||||| | ||||||||||||| || || || |||| ||| ||||| ||||| || |||| | || |
|
|
| T |
28017417 |
aaaggcatcattcatcaaagagcttgtgtagaaacacctgaacaaaatgctagagtagagagaaaacaccgacacattctcaatgttgctagag-ctttg |
28017515 |
T |
|
| Q |
207 |
tt-tttcaatccaaactccccaa |
228 |
Q |
| |
|
|| |||||||||||||| ||||| |
|
|
| T |
28017516 |
ttgtttcaatccaaacttcccaa |
28017538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 13130806 - 13130867
Alignment:
| Q |
131 |
tgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgt |
192 |
Q |
| |
|
||||||||||| || || |||||| |||||||||||| ||||| |||||||| |||||||| |
|
|
| T |
13130806 |
tgtgttgaaactccccaacaaaatggtagagttgaaagaaagcatcaacatatccttaatgt |
13130867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 122; Significance: 4e-62; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 119 - 531
Target Start/End: Complemental strand, 23903448 - 23903036
Alignment:
| Q |
119 |
catcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagaccttctt-tttcaatcc |
217 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| ||||||||||| | ||||||||||| ||||||| || |||| | || || |||||||| |
|
|
| T |
23903448 |
catcatagatcttgtgttgaaacacctcaacaaaatgccagagttgaaagaagagaccaacatattattaatgtggcaagag-ctttattgtttcaatct |
23903350 |
T |
|
| Q |
218 |
aaactccccaaacaattttggtgttatgctctcaatcatacatttttcttgattaatagagtttctactcctttacttgaccatcaaactccttatcaaa |
317 |
Q |
| |
|
|||| || ||||||||||||||||||||| ||| |||| | ||||| | ||||| ||||||||||| | |||||||| || |||| || |||||| |
|
|
| T |
23903349 |
aaacgtccaaaacaattttggtgttatgctgtcagtcatgctgttttcctcattaacagagtttctacccttttacttggtcacaaaacaccctatcaac |
23903250 |
T |
|
| Q |
318 |
ttttataagactctttgcctgatatcaaactttttaaagtgtttggatctctgtgttatgcttccacaatcacttcccaaagatctaaacttgaccctag |
417 |
Q |
| |
|
| | || |||||||| || || | |||||||||||||| ||||| || |||||||||||||| || || ||||| |||||||||||||||||||| |
|
|
| T |
23903249 |
tcatgtatgactctttacccgaccttaaactttttaaagtttttggttcactgtgttatgcttcaactatattgtcccacagatctaaacttgaccctag |
23903150 |
T |
|
| Q |
418 |
agctagaaaatgttgtttcttggggtacaagtcaggttttaaagggtctgtgcttttttatttacattctagagaaatattcatttctagaaatgttgtt |
517 |
Q |
| |
|
||| ||||| ||||||||||| || |||||||||||||| || || | | | | |||| ||||||||||||||||||| ||||| ||||||||||| || |
|
|
| T |
23903149 |
agccagaaagtgttgtttcttaggctacaagtcaggtttcaagggttttttccattttgatttacattctagagaaattttcatctctagaaatgtaatt |
23903050 |
T |
|
| Q |
518 |
ttccatgatcatat |
531 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
23903049 |
tttcatgatcatat |
23903036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 209 - 587
Target Start/End: Complemental strand, 36732656 - 36732278
Alignment:
| Q |
209 |
tttcaatccaaactccccaaacaattttggtgttatgctctcaatcatacatttttcttgattaatagagtttctactcctttacttgaccatcaaactc |
308 |
Q |
| |
|
|||||||| ||||| | ||||||||||||||||||||| ||| |||| | ||||| | ||||| |||||||| ||||||||||||| || |||| | |
|
|
| T |
36732656 |
tttcaatctaaactttcaaaacaattttggtgttatgctgtcagtcatgctgttttccttattaacagagtttccactcctttacttggtcacaaaacac |
36732557 |
T |
|
| Q |
309 |
cttatcaaattttataagactctttgcctgatatcaaactttttaaagtgtttggatctctgtgttatgcttccacaatcacttcccaaagatctaaact |
408 |
Q |
| |
|
|||||||| | | || || ||||| ||||| | ||||| |||||||| ||||| ||||| || ||||| || || || || || ||||||||||| |
|
|
| T |
36732556 |
cttatcaactcctgtatgattctttacctgaccttaaactctttaaagtctttggttctctttgctatgcctctactatattgtctcacagatctaaact |
36732457 |
T |
|
| Q |
409 |
tgaccctagagctagaaaatgttgtttcttggggtacaagtcaggttttaaagggtctgtgcttttttatttacattctagagaaatattcatttctaga |
508 |
Q |
| |
|
|||||||||||| | ||||||||||||||| || |||||||||||||| || || | ||| |||||| ||||||||||||||||||| || || |||||| |
|
|
| T |
36732456 |
tgaccctagagccataaaatgttgtttcttaggctacaagtcaggtttcaagggttttgttctttttgatttacattctagagaaatctttatatctaga |
36732357 |
T |
|
| Q |
509 |
aatgttgttttccatgatcatatacttccttatccttcttcttttgtgaagaatttggaatattttccattttcttcat |
587 |
Q |
| |
|
||||| |||| ||||||||||| |||||||||||| |||| | | |||||||||||||||||||| |||||||||| |
|
|
| T |
36732356 |
aatgtaatttttcatgatcatattcttccttatcctccttcatcttaaaagaatttggaatattttcctttttcttcat |
36732278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 229
Target Start/End: Original strand, 26472135 - 26472237
Alignment:
| Q |
127 |
atcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagaccttctttttcaatccaaactcccc |
226 |
Q |
| |
|
||||||||||||||| || || |||||| |||||||||||| ||||| ||||||||||||||||| || |||| | ||||| ||||| ||||| ||| |
|
|
| T |
26472135 |
atcttgtgttgaaactccccaacaaaatggtagagttgaaagaaagcatcaacatattcttaatgttgctagagctttacttttccaatctaaacttccc |
26472234 |
T |
|
| Q |
227 |
aaa |
229 |
Q |
| |
|
||| |
|
|
| T |
26472235 |
aaa |
26472237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 550927 - 550842
Alignment:
| Q |
107 |
aaaggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgt |
192 |
Q |
| |
|
||||||||||||||||| || ||||||||||| || ||||| |||||| || || ||||||||||| |||||||| |||||||| |
|
|
| T |
550927 |
aaaggcatcattcatcaaaggtcttgtgttgagactcctcaacaaaatggtattgtagaaaggaagcatcaacatatccttaatgt |
550842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 30281339 - 30281254
Alignment:
| Q |
107 |
aaaggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgt |
192 |
Q |
| |
|
||||||||||||||||| || ||||||||||| || ||||| |||||| || || ||||||||||| |||||||| |||||||| |
|
|
| T |
30281339 |
aaaggcatcattcatcaaaggtcttgtgttgagactcctcaacaaaatggtattgtagaaaggaagcatcaacatatccttaatgt |
30281254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 414 - 525
Target Start/End: Complemental strand, 16990625 - 16990514
Alignment:
| Q |
414 |
ctagagctagaaaatgttgtttcttggggtacaagtcaggttttaaagggtctgtgcttttttatttacattctagagaaatattcatttctagaaatgt |
513 |
Q |
| |
|
||||||| ||||| ||| |||||| || |||||||| || || ||||| || || |||||| | |||||||| |||||||| || |||| |||||||| |
|
|
| T |
16990625 |
ctagagccagaaagtgtattttcttaggttacaagtctggattcaaaggttcagttctttttgacttacattccagagaaatctttgtttcaagaaatgt |
16990526 |
T |
|
| Q |
514 |
tgttttccatga |
525 |
Q |
| |
|
|||||||||||| |
|
|
| T |
16990525 |
tgttttccatga |
16990514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 228
Target Start/End: Complemental strand, 16990932 - 16990811
Alignment:
| Q |
107 |
aaaggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagaccttc |
206 |
Q |
| |
|
||||||||||||||||| ||| ||||||| ||||||||| | ||||||||||||| || || || || ||||| ||||| ||||| || |||| | || |
|
|
| T |
16990932 |
aaaggcatcattcatcaaagagcttgtgtagaaacacctgaacaaaatgctagagtagagagaaaacatcaacacattctcaatgttgctagag-ctttg |
16990834 |
T |
|
| Q |
207 |
tt-tttcaatccaaactccccaa |
228 |
Q |
| |
|
|| |||||||||||||| ||||| |
|
|
| T |
16990833 |
ttgtttcaatccaaacttcccaa |
16990811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 20324129 - 20324055
Alignment:
| Q |
110 |
ggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatatt |
184 |
Q |
| |
|
||||| |||||||| | ||||||||||||||| ||||| |||||| ||||||||| ||||| || ||||||||| |
|
|
| T |
20324129 |
ggcattattcatcaaaaatcttgtgttgaaactcctcaacaaaatggtagagttgagaggaaacatcaacatatt |
20324055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 528 - 586
Target Start/End: Complemental strand, 23885073 - 23885012
Alignment:
| Q |
528 |
atatacttccttatccttcttcttttgtgaagaat---ttggaatattttccattttcttca |
586 |
Q |
| |
|
|||| ||||||||||||||||| | || ||||||| |||||||||||||||||||||||| |
|
|
| T |
23885073 |
atattcttccttatccttcttcatctgagaagaataatttggaatattttccattttcttca |
23885012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 49; Significance: 1e-18; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 433 - 525
Target Start/End: Original strand, 17130095 - 17130187
Alignment:
| Q |
433 |
tttcttggggtacaagtcaggttttaaagggtctgtgcttttttatttacattctagagaaatattcatttctagaaatgttgttttccatga |
525 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||| || ||| || | ||||||||||||| || || ||||||||||||||||||||||| |
|
|
| T |
17130095 |
tttcttgggttacaagtcaggttttaaaggatctgttctctttgatcttgattctagagaaatctttatctctagaaatgttgttttccatga |
17130187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 22177011 - 22176933
Alignment:
| Q |
116 |
attcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtag |
194 |
Q |
| |
|
|||||||| | ||||||||||||||| || || |||||| |||||| |||||||| |||||||||||||| ||||||| |
|
|
| T |
22177011 |
attcatcaaaaatcttgtgttgaaactccccaacaaaatggtagagtagaaaggaaacaccaacatattctcaatgtag |
22176933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 17129767 - 17129887
Alignment:
| Q |
105 |
ccaaaggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagacct |
204 |
Q |
| |
|
||||||| ||||||||||| |||||||||||| | || | | || |||||| |||||| ||||| |||||||||||||| || ||||| || |||| | |
|
|
| T |
17129767 |
ccaaaggtatcattcatcaaagatcttgtgttaagactcttgagcaaaatggtagagtggaaagaaagcaccaacatatcctcaatgttgctagagcttt |
17129866 |
T |
|
| Q |
205 |
tctttttcaatccaaactccc |
225 |
Q |
| |
|
||||| ||||| |||||||| |
|
|
| T |
17129867 |
acttttccaatctaaactccc |
17129887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 433 - 525
Target Start/End: Complemental strand, 19804089 - 19803998
Alignment:
| Q |
433 |
tttcttggggtacaagtcaggttttaaagggtctgtgcttttttatttacattctagagaaatattcatttctagaaatgttgttttccatga |
525 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||| || ||| || | ||||||||||||| || || ||||||||||||||||| ||||| |
|
|
| T |
19804089 |
tttcttggaatacaagtcaggttttaaagggtttgtactctttgatcttgattctagagaaat-tttatctctagaaatgttgtttttcatga |
19803998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 18254024 - 18254086
Alignment:
| Q |
130 |
ttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgt |
192 |
Q |
| |
|
|||||||||||| || || |||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
18254024 |
ttgtgttgaaactccccaacaaaatgggagagttgaaaggaagcatcaacatattcttaatgt |
18254086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 16986763 - 16986864
Alignment:
| Q |
119 |
catcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagaccttctttttcaatcca |
218 |
Q |
| |
|
||||||||||| ||||||||||| || || | |||| |||||||| || ||||||||||||||| | ||||||| ||||| ||||||| ||||||| |
|
|
| T |
16986763 |
catcatagatcctgtgttgaaactccccaacagaatgggagagttgagagaaagcaccaacatattttgaatgtaggcagagctcttctttaccaatcca |
16986862 |
T |
|
| Q |
219 |
aa |
220 |
Q |
| |
|
|| |
|
|
| T |
16986863 |
aa |
16986864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 477 - 525
Target Start/End: Original strand, 14037311 - 14037359
Alignment:
| Q |
477 |
atttacattctagagaaatattcatttctagaaatgttgttttccatga |
525 |
Q |
| |
|
||||| |||| ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
14037311 |
atttaaattccagagaaatatttgtttctagaaatgttgttttccatga |
14037359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 413 - 551
Target Start/End: Complemental strand, 8122978 - 8122840
Alignment:
| Q |
413 |
cctagagctagaaaatgttgtttcttggggtacaagtcaggttttaaagggtctgtgcttttttatttacattctagagaaatattcatttctagaaatg |
512 |
Q |
| |
|
|||||||| ||||| ||| |||||| || || ||||||||||| ||||| |||||||| ||| || | ||||||||||||| || | ||||||||| |
|
|
| T |
8122978 |
cctagagccagaaagtgtgttttcttaggatataagtcaggtttcaaaggatctgtgctctttgatcttgattctagagaaatctttgtctctagaaata |
8122879 |
T |
|
| Q |
513 |
ttgttttccatgatcatatacttccttatccttcttctt |
551 |
Q |
| |
|
|||| || ||||| ||||| || ||||||||||||| |
|
|
| T |
8122878 |
ttgtctttcatgaattaatactgccatatccttcttctt |
8122840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 192
Target Start/End: Complemental strand, 19804412 - 19804330
Alignment:
| Q |
110 |
ggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgt |
192 |
Q |
| |
|
|||||||||||| | |||||||||||||| || ||| | |||||| |||||| ||||| ||||| |||||||| || ||||| |
|
|
| T |
19804412 |
ggcatcattcattagagatcttgtgttgagacccctgaacaaaatggtagagtggaaagaaagcatcaacatatcctcaatgt |
19804330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 433 - 514
Target Start/End: Original strand, 35087732 - 35087813
Alignment:
| Q |
433 |
tttcttggggtacaagtcaggttttaaagggtctgtgcttttttatttacattctagagaaatattcatttctagaaatgtt |
514 |
Q |
| |
|
||||||||| |||||||| |||| ||||| | ||| |||||| | | ||||||||||||||||||||||| ||| ||||| |
|
|
| T |
35087732 |
tttcttgggttacaagtctggttacaaaggctttgtcctttttgacattcattctagagaaatattcatttccagacatgtt |
35087813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 48; Significance: 5e-18; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 34066959 - 34067074
Alignment:
| Q |
105 |
ccaaaggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagacct |
204 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |||||||| |||||| ||| ||||| || || |||||||||||||||||| ||| |||| || |
|
|
| T |
34066959 |
ccaaaggcatttttcatcatagatcttgtgttgagacacctcaacaaaatggtagggttgagagaaaacaccaacatattcttaatataggaagagctct |
34067058 |
T |
|
| Q |
205 |
tctttttcaatccaaa |
220 |
Q |
| |
|
|||||||| |||||| |
|
|
| T |
34067059 |
cctttttcagtccaaa |
34067074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 4500314 - 4500399
Alignment:
| Q |
107 |
aaaggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgt |
192 |
Q |
| |
|
||||||||||||||||| || ||||||||||| || ||||| |||||| || || ||||||||||| |||||||| |||||||| |
|
|
| T |
4500314 |
aaaggcatcattcatcaaaggtcttgtgttgagactcctcaacaaaatggtattgtagaaaggaagcatcaacatatccttaatgt |
4500399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 222
Target Start/End: Original strand, 14613497 - 14613614
Alignment:
| Q |
105 |
ccaaaggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagacct |
204 |
Q |
| |
|
|||| ||||| || |||||||| || |||||||||||||| || | |||| |||||||||||| || || ||||| ||||||||||||| |||| || |
|
|
| T |
14613497 |
ccaagggcattatacatcataggtcatgtgttgaaacaccacaacagaatggtagagttgaaagaaaacatcaacacattcttaatgtaggtagagctct |
14613596 |
T |
|
| Q |
205 |
tctttttcaatccaaact |
222 |
Q |
| |
|
|||| |||||||||||| |
|
|
| T |
14613597 |
cctttatcaatccaaact |
14613614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 15823866 - 15823951
Alignment:
| Q |
107 |
aaaggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgt |
192 |
Q |
| |
|
||||||||||||||||| || ||||||||||| || ||||| |||||| || || ||||||||||| |||||||| |||||||| |
|
|
| T |
15823866 |
aaaggcatcattcatcaaaggtcttgtgttgagactcctcaacaaaatggtattgtagaaaggaagcatcaacatatccttaatgt |
15823951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 228
Target Start/End: Original strand, 6342388 - 6342509
Alignment:
| Q |
107 |
aaaggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagaccttc |
206 |
Q |
| |
|
||||||||||||||||| ||| ||||||| ||||||||| | ||||||||||||| || || || |||| ||| ||||| ||||| || |||| | || |
|
|
| T |
6342388 |
aaaggcatcattcatcaaagagcttgtgtagaaacacctgaacaaaatgctagagtagagagaaaacaccgacacattctcaatgttgctagag-ctttg |
6342486 |
T |
|
| Q |
207 |
tt-tttcaatccaaactccccaa |
228 |
Q |
| |
|
|| |||||||||||||| ||||| |
|
|
| T |
6342487 |
ttgtttcaatccaaacttcccaa |
6342509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 165
Target Start/End: Complemental strand, 25422296 - 25422261
Alignment:
| Q |
130 |
ttgtgttgaaacacctcagtaaaatgctagagttga |
165 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| |
|
|
| T |
25422296 |
ttgtgttgaaacacctcagcaaaatgctagagttga |
25422261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 34309860 - 34309945
Alignment:
| Q |
107 |
aaaggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgt |
192 |
Q |
| |
|
||||| ||||||||||| || ||||||||||| || ||||| |||||| || || ||||||||||| |||||||| || ||||| |
|
|
| T |
34309860 |
aaaggtatcattcatcaaaggtcttgtgttgagactcctcaacaaaatggtattgtagaaaggaagcatcaacatatcctcaatgt |
34309945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 194
Target Start/End: Original strand, 12994874 - 12994949
Alignment:
| Q |
119 |
catcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtag |
194 |
Q |
| |
|
||||| ||||||||| |||| |||||||| ||||||||| ||||||||| |||||||| ||||||||||| |||| |
|
|
| T |
12994874 |
catcagagatcttgtcttgagacacctcaacaaaatgctatagttgaaagaaagcaccagcatattcttaacgtag |
12994949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 229
Target Start/End: Original strand, 8836232 - 8836334
Alignment:
| Q |
127 |
atcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagaccttctttttcaatccaaactcccc |
226 |
Q |
| |
|
||||||||||||||| || || |||||| |||||||||||| ||||| ||||||||||||||||| || |||| | ||||| ||||| ||||| ||| |
|
|
| T |
8836232 |
atcttgtgttgaaactccccaacaaaatggtagagttgaaagaaagcatcaacatattcttaatgttgctagagctttacttttccaatctaaacttccc |
8836331 |
T |
|
| Q |
227 |
aaa |
229 |
Q |
| |
|
||| |
|
|
| T |
8836332 |
aaa |
8836334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 53978164 - 53978256
Alignment:
| Q |
130 |
ttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagaccttctttttcaatccaaact |
222 |
Q |
| |
|
|||||||||||| || || |||||| ||||||||||||||||| ||||||||||||||||| || |||| || ||||| ||||| ||||| |
|
|
| T |
53978164 |
ttgtgttgaaactccccaacaaaatgggagagttgaaaggaagcatcaacatattcttaatgttgctagagctctgcttttccaatcaaaact |
53978256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 12285511 - 12285589
Alignment:
| Q |
116 |
attcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtag |
194 |
Q |
| |
|
|||||||| | |||||||||| |||| || || |||||| |||||| |||||||| |||||||||||||| ||||||| |
|
|
| T |
12285511 |
attcatcaaaaatcttgtgttaaaactccccaacaaaatggtagagtagaaaggaaacaccaacatattctcaatgtag |
12285589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 19586780 - 19586702
Alignment:
| Q |
116 |
attcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtag |
194 |
Q |
| |
|
|||||||| | ||||||||||||||| || || |||||| |||||| |||||||| |||||||| ||||| ||||||| |
|
|
| T |
19586780 |
attcatcaaaaatcttgtgttgaaactccccaacaaaatggtagagtagaaaggaaacaccaacacattctcaatgtag |
19586702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 229
Target Start/End: Original strand, 55310167 - 55310269
Alignment:
| Q |
127 |
atcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagaccttctttttcaatccaaactcccc |
226 |
Q |
| |
|
||||||||||||||| || || |||||| |||||||||||| ||||| ||| ||||||||||||| || |||| | ||||| ||||| ||||| ||| |
|
|
| T |
55310167 |
atcttgtgttgaaactccccaacaaaatggtagagttgaaagaaagcatcaatatattcttaatgttgctagagctttacttttccaatctaaacttccc |
55310266 |
T |
|
| Q |
227 |
aaa |
229 |
Q |
| |
|
||| |
|
|
| T |
55310267 |
aaa |
55310269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 222
Target Start/End: Complemental strand, 4646121 - 4646016
Alignment:
| Q |
117 |
ttcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagaccttctttttcaatc |
216 |
Q |
| |
|
||||||||| ||||||||||| || ||||| || ||| ||| ||| | || ||| |||||||||| |||||||||| ||||| |||||| | |||||| |
|
|
| T |
4646121 |
ttcatcataagtcttgtgttgagacccctcaacaacatgttagggttaagagaaagtaccaacatatccttaatgtaggcagagcccttctatatcaatc |
4646022 |
T |
|
| Q |
217 |
caaact |
222 |
Q |
| |
|
||||| |
|
|
| T |
4646021 |
taaact |
4646016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 13890029 - 13890086
Alignment:
| Q |
165 |
aaaggaagcaccaacatattcttaatgtagccagagaccttctttttcaatccaaact |
222 |
Q |
| |
|
|||| ||||||||||||||||||||||| | |||| |||||||||||||| ||||| |
|
|
| T |
13890029 |
aaagaaagcaccaacatattcttaatgttggaagagctcttctttttcaatctaaact |
13890086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0329 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0329
Description:
Target: scaffold0329; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 11220 - 11298
Alignment:
| Q |
116 |
attcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtag |
194 |
Q |
| |
|
|||||||| | ||||||||||||||| || || |||||| |||||| |||||||| |||||||||||||| ||||||| |
|
|
| T |
11220 |
attcatcaaaaatcttgtgttgaaactccccaacaaaatggtagagtagaaaggaaacaccaacatattctcaatgtag |
11298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0164 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0164
Description:
Target: scaffold0164; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 27208 - 27116
Alignment:
| Q |
130 |
ttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagaccttctttttcaatccaaact |
222 |
Q |
| |
|
|||||||||||| || || |||||| ||||||||||||||||| ||||||||||||||||| || |||| || ||||| ||||| ||||| |
|
|
| T |
27208 |
ttgtgttgaaactccccaacaaaatgggagagttgaaaggaagcatcaacatattcttaatgttgctagagctctgcttttccaatcaaaact |
27116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 37; Significance: 0.00000000002; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 15193146 - 15193238
Alignment:
| Q |
130 |
ttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagaccttctttttcaatccaaact |
222 |
Q |
| |
|
|||||||||||| || || |||||| ||||||||||||||||| ||||||||||||||||| || |||| || ||||| ||||| ||||| |
|
|
| T |
15193146 |
ttgtgttgaaactccccaacaaaatgggagagttgaaaggaagcatcaacatattcttaatgttgctagagctctccttttccaatcaaaact |
15193238 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 192
Target Start/End: Complemental strand, 44290069 - 44289982
Alignment:
| Q |
105 |
ccaaaggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgt |
192 |
Q |
| |
|
|||||||||| |||||||| | ||| |||||||| | ||||| |||||| ||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
44290069 |
ccaaaggcattattcatcaaaaatcctgtgttgagtcgcctcaacaaaatggcagagtggaaagaaagcaccaacatattcttaatgt |
44289982 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 15757398 - 15757496
Alignment:
| Q |
113 |
atcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagaccttcttttt |
211 |
Q |
| |
|
||||||||||| || |||||||||||||| ||||| | |||| |||||| || || ||||| ||||||||| | ||||| || |||| ||||||||| |
|
|
| T |
15757398 |
atcattcatcaaaggtcttgtgttgaaactcctcaacataatggtagagtagagagaaagcatcaacatattttaaatgttgctagagctcttcttttt |
15757496 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1416 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1416
Description:
Target: scaffold1416; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 228
Target Start/End: Complemental strand, 1343 - 1222
Alignment:
| Q |
107 |
aaaggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagagaccttc |
206 |
Q |
| |
|
||||||||||||||||| ||| ||||||| ||||||||| | ||||||||||||| || || || |||| ||| ||||| ||||| || |||| | || |
|
|
| T |
1343 |
aaaggcatcattcatcaaagagcttgtgtagaaacacctgaacaaaatgctagagtagagagaaaacacctacacattctcaatgttgctagag-ctttg |
1245 |
T |
|
| Q |
207 |
tt-tttcaatccaaactccccaa |
228 |
Q |
| |
|
|| |||||||||||||| ||||| |
|
|
| T |
1244 |
ttgtttcaatccaaacttcccaa |
1222 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1049 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold1049
Description:
Target: scaffold1049; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 2454 - 2369
Alignment:
| Q |
107 |
aaaggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgt |
192 |
Q |
| |
|
||||| ||||||||||| || ||||||||||| || ||||| |||||| || || ||||||||||| |||||||| |||||||| |
|
|
| T |
2454 |
aaaggtatcattcatcaaaggtcttgtgttgagactcctcaacaaaatggtattgtagaaaggaagcatcaacatatccttaatgt |
2369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 85888 - 85957
Alignment:
| Q |
131 |
tgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgtagccagag |
200 |
Q |
| |
|
||||||||||| |||||| ||||||| || |||||||| ||||| || ||||| |||||||||| ||||| |
|
|
| T |
85888 |
tgtgttgaaacccctcagcaaaatgcaagggttgaaagaaagcatcagcatatacttaatgtaggcagag |
85957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0037 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0037
Description:
Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 192
Target Start/End: Original strand, 53645 - 53732
Alignment:
| Q |
105 |
ccaaaggcatcattcatcatagatcttgtgttgaaacacctcagtaaaatgctagagttgaaaggaagcaccaacatattcttaatgt |
192 |
Q |
| |
|
|||||| ||| |||||||| | ||| |||||||| | ||||| |||||| ||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
53645 |
ccaaagacattattcatcaaaaatcctgtgttgagtcgcctcaacaaaatggcagagtggaaagaaagcaccaacatattcttaatgt |
53732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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