View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0594_high_39 (Length: 228)

Name: NF0594_high_39
Description: NF0594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0594_high_39
NF0594_high_39
[»] chr7 (1 HSPs)
chr7 (69-131)||(29175523-29175585)


Alignment Details
Target: chr7 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 29175523 - 29175585
Alignment:
69 gttatcaaacttcctcatgctcgaaccattgcatgccctcgagcaattagtgatgcaggaggg 131  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
29175523 gttatcaaacttcctcatgctcgaaccattgcatgccctcgaacaattagtgatgcaggaggg 29175585  T

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