View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0596_low_10 (Length: 259)
Name: NF0596_low_10
Description: NF0596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0596_low_10 |
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| [»] scaffold0740 (1 HSPs) |
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Alignment Details
Target: scaffold0740 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0740
Description:
Target: scaffold0740; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 2602 - 2530
Alignment:
| Q |
187 |
ttgcatgtggaatgtgatactcaagagtttttgttgtgttgagttgataggaactgcaacaagaggagttaaa |
259 |
Q |
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| T |
2602 |
ttgcacgtggaatgtgatactcaagagtttttgttgtgttgagttgataagaactgcaacaagaggagttaaa |
2530 |
T |
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