View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0598-INSERTION-13 (Length: 666)
Name: NF0598-INSERTION-13
Description: NF0598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0598-INSERTION-13 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 525; Significance: 0; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 525; E-Value: 0
Query Start/End: Original strand, 8 - 596
Target Start/End: Complemental strand, 47285915 - 47285327
Alignment:
| Q |
8 |
atgtcatcaacaacaacgagatggtgttgaatacttcttctgcttatgctcatcctagtatccttggaggctcgtcatcaaattcacaacaccctccatc |
107 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47285915 |
atgtcatcaacaacaatgagatggtgttgaatacttcttctgcttatgctcatcctagtatccttggaggctcgtcatcaaattcacaacaccctccatc |
47285816 |
T |
|
| Q |
108 |
tgaggcaaacaatattgttgctactaatggtgtccgagcttcaaattgtaccaacatgaagaggaaaaaagaggatattcttgatgatggtagaatccac |
207 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
47285815 |
tgaggcaaataatattgttgctactaatggtgtccaggcttcaaattgtaccaacatgaagaggaaaaaagaggatattattgatgatggtagaatccac |
47285716 |
T |
|
| Q |
208 |
agtctacctcacaataaacatggaccgtacacgtgtccagagtgcaacaaagtaatagcaacatcacagaaattcgctgctcatgcatcaagtcactaca |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
47285715 |
agtctacctcacaataaacatggaccgtacacgtgttcagagtgcaacaaagtaatagcaacatcacagaaattcgctgctcatgtatcaagtcactaca |
47285616 |
T |
|
| Q |
308 |
agactgaaagtgaagaagagagaaaaaagagatacatgtctaggatccgaaagagaccagatctccagattcaaaagctcgatgatggaacaactactct |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47285615 |
agactgaaagtgaagaagagagaaaaaagagatacatgtctaggatccgaaagagaccatatctccagattcaaaagctcgatgatggaacaactactct |
47285516 |
T |
|
| Q |
408 |
tgttcctgtcattgcttctattgatcagtcacatgctccttctttcagttatgatactcaaaatatgagcgcctctgctcctcctctaagtggggtaaaa |
507 |
Q |
| |
|
|||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |
|
|
| T |
47285515 |
tgtttctgtcattgcttttattgatcagtcgcatgctccttctttcagttatgatactcaaaatataagcgcctgtgctcctcctctaagtggggtaaaa |
47285416 |
T |
|
| Q |
508 |
gttaaacatgagtttactgataattaatatatattatgcatgctcaatttgtaatgtttatttgagaacttagcttcatgttgcttccc |
596 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
47285415 |
gttaaacatgagtttgttgataattaatatatattatgcatgctcaatttgtaatgtttatttgagagcttagcttcatgttgcttccc |
47285327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 8 - 582
Target Start/End: Complemental strand, 47307478 - 47306901
Alignment:
| Q |
8 |
atgtcatcaacaacaacgagatggtgttgaatacttcttctgcttatgctcatcctagtatccttggaggctcgtcatcaaattcacaacaccctccatc |
107 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| |||| |||||||| | | |||||||||||||||| ||| |||||||||| || ||||| |
|
|
| T |
47307478 |
atgtcatcaacaacaacaagatggtgttgaatacttcttccgcttttgctcatcttgatctccttggaggctcgtcttcacattcacaacaaccaccatc |
47307379 |
T |
|
| Q |
108 |
tgaggcaaacaatattgttgctactaatggtg------tccgagcttcaaattgtaccaacatgaagaggaaaaaagaggatattcttgatgatggtaga |
201 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| |||| |||| ||| |||||||||||||||||||||||| || ||| |||||||||||||| |
|
|
| T |
47307378 |
tgagacaaacaatattgttgctactaatggtgatgaaatccgggcttttaataataccaacatgaagaggaaaaaagaagaaattgttgatgatggtaga |
47307279 |
T |
|
| Q |
202 |
atccacagtctacctcacaataaacatggaccgtacacgtgtccagagtgcaacaaagtaatagcaacatcacagaaattcgctgctcatgcatcaagtc |
301 |
Q |
| |
|
| |||||||||| | ||||||||| ||||||| || ||||||||| |||| ||||||||| ||||||||||||| ||||| ||| ||||||||||| | |
|
|
| T |
47307278 |
acccacagtctatcacacaataaaaatggaccatatacgtgtccaaagtgtaacaaagtactagcaacatcacaaaaatttgctagtcatgcatcaatac |
47307179 |
T |
|
| Q |
302 |
actacaagactgaaagtgaagaagagagaaaaaagagatacatgtctaggatccgaaagagaccagatctccagattc-aaaagctcgatgatggaacaa |
400 |
Q |
| |
|
|||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||| |
|
|
| T |
47307178 |
actacaagtcagaaagtgaagaagagaaaaaaaagagatacatgtctaggatccgaaagagaccagatctcc-gattccaaaagctcaatgatggaacaa |
47307080 |
T |
|
| Q |
401 |
ctactcttgttcctgtcattgcttctattgatcagtcacatgctccttctttcagttatgatactcaaaatatgagcgcctctgctcctcctctaagtgg |
500 |
Q |
| |
|
||||| ||||||| |||||||||| |||| |||||||||||| |||| | |||||| ||| ||| |||||||| || ||||||||||||||||||| |
|
|
| T |
47307079 |
ctacttttgttcc---cattgcttctgttgaccagtcacatgctgtttctgtaagttataataatcataatatgagtgcgcctgctcctcctctaagtgg |
47306983 |
T |
|
| Q |
501 |
ggtaaaagttaaacatgagtttactgataattaatatatattatgcatgctcaatttgtaatgtttatttgagaacttagct |
582 |
Q |
| |
|
||| ||||||||| ||| | ||||||| |||| |||||||||| |||||||||| |||||||||||||||| ||||||| |
|
|
| T |
47306982 |
ggtcaaagttaaattggagcctgctgataactaatttatattatgcttgctcaatttataatgtttatttgagagcttagct |
47306901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 108; Significance: 7e-54; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 255 - 570
Target Start/End: Complemental strand, 2589715 - 2589401
Alignment:
| Q |
255 |
caaagtaatagcaacatcacagaaattcgctgctcatgcatcaagtcactacaagactgaaagtgaagaagagagaaaaaagagatacatgtctaggatc |
354 |
Q |
| |
|
||||||||| ||||||| |||||||||||| ||||| |||||||||||||| |||||| | ||||||||||||||||||||||||||||| |||| |
|
|
| T |
2589715 |
caaagtaatttcaacatcccagaaattcgctagtcatgtgacaagtcactacaagtctgaaactctagaagagagaaaaaagagatacatgtctaagatc |
2589616 |
T |
|
| Q |
355 |
cgaaagagaccagatctccagattcaaaagctcgatgatggaacaactactcttgttcctgtcattgcttctattgatcagtcacatgctccttctttca |
454 |
Q |
| |
|
|||||||||||| |||||| ||||||||||||| ||||||||||||||||| ||||||| || |||||||| ||||||| || |||||| ||| ||| |
|
|
| T |
2589615 |
cgaaagagaccaaatctccggattcaaaagctcaatgatggaacaactacttttgttccagttgttgcttctgttgatcaatctcatgctactttggtca |
2589516 |
T |
|
| Q |
455 |
gttatgatactcaaaatatgagcgcctctgctcctcctctaagtggggtaaaagttaaacatgagtttactgataattaatatatattatgcatgctcaa |
554 |
Q |
| |
|
|||||||| |||||||||||| || ||||||| | || || |||||| ||||| ||| || |||||||| ||||||||||||||||||| |
|
|
| T |
2589515 |
attatgataatcaaaatatgagttcccttgctccttcggtatacggagtaaaaattaaattggag-ccacaaataattaaaatatattatgcatgctcaa |
2589417 |
T |
|
| Q |
555 |
tttgtaatgtttattt |
570 |
Q |
| |
|
|||||||| ||||||| |
|
|
| T |
2589416 |
tttgtaatatttattt |
2589401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 220 - 570
Target Start/End: Original strand, 10299783 - 10300133
Alignment:
| Q |
220 |
aataaacatggaccgtacacgtgtccagagtgcaacaaagtaatagcaacatcacagaaattcgctgctcatgcatcaagtcactacaagactgaaagtg |
319 |
Q |
| |
|
|||||||||||| |||||||||||||| |||||||||||||||| ||||||| || |||| ||| ||||| ||| ||||||||| ||||| | |
|
|
| T |
10299783 |
aataaacatggatcgtacacgtgtccaaagtgcaacaaagtaatttcaacatcccattaatttgctagtcatgtggcaactcactacaattatgaaactc |
10299882 |
T |
|
| Q |
320 |
aagaagagagaaaaaagagatacatgtctaggatccgaaagagaccagatctccagattcaaaagctcgatgatggaacaactactcttgttcctgtcat |
419 |
Q |
| |
|
|||| | |||||||||||||||||||||||||||| ||||||| | |||| ||||||| ||| ||| ||| ||||||||| ||| |||||| || | |
|
|
| T |
10299883 |
aagagaaaagaaaaaagagatacatgtctaggatcccaaagagataaaatcttcagattccaaaactcaatgttggaacaacaacttttgttcaagttgt |
10299982 |
T |
|
| Q |
420 |
tgcttctattgatcagtcacatgctccttctttcagttatgatactcaaaatatgagcgcctctgctcctcctctaagtggggtaaaagttaaacatgag |
519 |
Q |
| |
|
|| ||||||||||||||| |||||| ||||| ||| |||||||| |||||||||||| ||| || || ||| | |||| | |||||||||||| || |
|
|
| T |
10299983 |
tgtttctattgatcagtcgcatgctgcttctgtcaattatgataatcaaaatatgagtgcccctacttctcttgtaagcgaagtaaaagttaaattaaag |
10300082 |
T |
|
| Q |
520 |
tttactgataattaatatatattatgcatgctcaatttgtaatgtttattt |
570 |
Q |
| |
|
|| ||||||||||| |||||||||||| | ||||||| |||| ||||||| |
|
|
| T |
10300083 |
cttgctgataattaaaatatattatgcaagttcaatttataatatttattt |
10300133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 217 - 570
Target Start/End: Original strand, 2589719 - 2590072
Alignment:
| Q |
217 |
cacaataaacatggaccgtacacgtgtccagagtgcaacaaagtaatagcaacatcacagaaattcgctgctcatgcatcaagtcactacaagactgaaa |
316 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||||||||||||| ||||||| || ||||| | | | || ||||||||||||| |||||| |
|
|
| T |
2589719 |
cacaataaacatggatcgtacacgtgtccaaagtgcaacaaagtaatttcaacatcccataaatttggtagtgatatggcaagtcactacaattctgaaa |
2589818 |
T |
|
| Q |
317 |
gtgaagaagagagaaaaaagagatacatgtctaggatccgaaagagaccagatctccagattcaaaagctcgatgatggaacaactactcttgttcctgt |
416 |
Q |
| |
|
| || | || || ||||||||||||||||||||||||| |||||||||| |||| || |||||||| ||| ||| ||||||||| ||| |||||| || |
|
|
| T |
2589819 |
ctcaaaaggaaaggaaaaagagatacatgtctaggatcccaaagagaccaaatcttcatattcaaaaactcaatgttggaacaacaacttttgttcgagt |
2589918 |
T |
|
| Q |
417 |
cattgcttctattgatcagtcacatgctccttctttcagttatgatactcaaaatatgagcgcctctgctcctcctctaagtggggtaaaagttaaacat |
516 |
Q |
| |
|
||| |||| |||||||||| |||||| ||||| ||| |||||||| |||||||||||| || || || ||| | |||| | |||||||||||| |
|
|
| T |
2589919 |
tgttgtttctgttgatcagtcgcatgctgcttctgtcaattatgataatcaaaatatgagtacccctacttctcttgtaagcgaagtaaaagttaaattg |
2590018 |
T |
|
| Q |
517 |
gagtttactgataattaatatatattatgcatgctcaatttgtaatgtttattt |
570 |
Q |
| |
|
|| || |||||||| || |||||||||||| | |||||||||||| ||||||| |
|
|
| T |
2590019 |
aagcttgctgataatgaaaatatattatgcaagttcaatttgtaatatttattt |
2590072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 296 - 570
Target Start/End: Complemental strand, 10299735 - 10299462
Alignment:
| Q |
296 |
caagtcactacaagactgaaagtgaagaagagagaaaaaa-gagatacatgtctaggatccgaaagagaccagatctccagattcaaaagctcgatgatg |
394 |
Q |
| |
|
|||||||||||||| |||||| | ||||||||||||||| |||||||||||||| |||| |||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
10299735 |
caagtcactacaagtctgaaactctagaagagagaaaaaaagagatacatgtctatgatctaaaagagaccaaatctccagattcaaaagctcaatgata |
10299636 |
T |
|
| Q |
395 |
gaacaactactcttgttcctgtcattgcttctattgatcagtcacatgctccttctttcagttatgatactcaaaatatgagcgcctctgctcctcctct |
494 |
Q |
| |
|
||||||||||| ||||||| || || ||||| ||||||| || |||||| ||| ||| |||||||| |||||||||||| || |||||||| | | |
|
|
| T |
10299635 |
gaacaactacttttgttccggttgtt-cttctgttgatcattctcatgctactttgatcaattatgataatcaaaatatgagttcccctgctccttcggt |
10299537 |
T |
|
| Q |
495 |
aagtggggtaaaagttaaacatgagtttactgataattaatatatattatgcatgctcaatttgtaatgtttattt |
570 |
Q |
| |
|
||| || |||||| ||||| ||| |||||||||||| ||||||||||||||||||||||||||| ||||||| |
|
|
| T |
10299536 |
aagcggagtaaaaattaaattagag-ccactgataattaaaatatattatgcatgctcaatttgtaatatttattt |
10299462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 107; Significance: 3e-53; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 217 - 570
Target Start/End: Original strand, 22222452 - 22222806
Alignment:
| Q |
217 |
cacaataaacatggaccgtacacgtgtccagagtgcaacaaa-gtaatagcaacatcacagaaattcgctgctcatgcatcaagtcactacaagactgaa |
315 |
Q |
| |
|
||||||||||||||| | ||||||||| || ||||||||||| ||||| ||||||| || ||||| ||| ||||| ||||||||||||| |||| |
|
|
| T |
22222452 |
cacaataaacatggatcatacacgtgtgcaaagtgcaacaaaagtaatttcaacatcccaaaaatttgctagtcatgtggcaagtcactacaattttgaa |
22222551 |
T |
|
| Q |
316 |
agtgaagaagagagaaaaaagagatacatgtctaggatccgaaagagaccagatctccagattcaaaagctcgatgatggaacaactactcttgttcctg |
415 |
Q |
| |
|
| | ||||||| |||||||||||||||||||||||||||| ||||||| || |||| ||||||||||| ||| ||| ||||||||| || ||||| | | |
|
|
| T |
22222552 |
actcaagaagaaagaaaaaagagatacatgtctaggatcccaaagagaacaaatctgcagattcaaaaactcaatgttggaacaacaacatttgtttcag |
22222651 |
T |
|
| Q |
416 |
tcattgcttctattgatcagtcacatgctccttctttcagttatgatactcaaaatatgagcgcctctgctcctcctctaagtggggtaaaagttaaaca |
515 |
Q |
| |
|
| ||| ||| ||||||||| |||||| ||||| ||| |||||||| |||||||||||| |||||||||||| | |||| | |||||||| ||| |
|
|
| T |
22222652 |
ttgttgtttccgttgatcagttgcatgctgcttctatcaattatgataatcaaaatatgagttcctctgctcctcttgtaagcgaagtaaaagtcaaatt |
22222751 |
T |
|
| Q |
516 |
tgagtttactgataattaatatatattatgcatgctcaatttgtaatgtttattt |
570 |
Q |
| |
|
||| || ||||||||||| |||||||||||| | |||||||||||| ||||||| |
|
|
| T |
22222752 |
ggagcttgctgataattaaaatatattatgcaagttcaatttgtaatatttattt |
22222806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 297 - 570
Target Start/End: Complemental strand, 22222406 - 22222132
Alignment:
| Q |
297 |
aagtcactacaagactgaaagtgaagaagagagaaaaaagagatacatgtctaggatccgaaagag--accagatctccagattcaaaagctcgatgatg |
394 |
Q |
| |
|
|||||||||||| |||||| | |||||||| ||||||||||||||||||||||||||||||||| |||| |||||| |||||| ||| || |||||| |
|
|
| T |
22222406 |
aagtcactacaaatctgaaactctagaagagaaaaaaaagagatacatgtctaggatccgaaagagtgaccaaatctccggattcataagatcaatgatg |
22222307 |
T |
|
| Q |
395 |
gaacaactactcttgttcctgtcattgcttctattgatcagtcacatgctccttctttcagttatgatactcaaaatatgagcgcctctgctcctcctct |
494 |
Q |
| |
|
||||||||||| |||||| || ||||||||||||| || || |||||| ||| | ||| |||||||| ||||||||||| || |||||||||| | |
|
|
| T |
22222306 |
gaacaactacttttgttcgagttgttgcttctattgaccaatctcatgctgcttttgtcaattatgataatcaaaatatgacttcccctgctcctccggt |
22222207 |
T |
|
| Q |
495 |
aagtggggtaaaagttaaacatgagtttactgataattaatatatattatgcatgctcaatttgtaatgtttattt |
570 |
Q |
| |
|
||| || |||||| ||||| ||| ||| |||||||| ||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22222206 |
aagcggagtaaaaattaaattggag-acactaataattaaaatatattatgcatgctcaatttgtaatatttattt |
22222132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 91; Significance: 9e-44; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 191 - 444
Target Start/End: Original strand, 38260955 - 38261211
Alignment:
| Q |
191 |
atgatggtagaatccacagtctacctcacaataaacatggaccgtacacgtgtccagagtgcaacaaagtaatagcaacatcacagaaattcgctgctca |
290 |
Q |
| |
|
||||||| ||||||||||| ||||| ||||| ||| ||||||| ||| | ||| || | ||||||||| || | | ||||||||| ||||| ||| ||| |
|
|
| T |
38260955 |
atgatggaagaatccacagcctaccacacaagaaatatggaccatacccatgttcaaaatgcaacaaaatatttgaaacatcacaaaaatttgctaatca |
38261054 |
T |
|
| Q |
291 |
tg---catcaagtcactacaagactgaaagtgaagaagagagaaaaaagagatacatgtctaggatccgaaagagaccagatctccagattcaaaagctc |
387 |
Q |
| |
|
|| |||||||||||| |||| |||||||||||||| ||||||||||||||||| |||||||| |||||||| || ||| ||||||||||||||| |
|
|
| T |
38261055 |
tgtttcatcaagtcactgcaagttcgaaagtgaagaagacagaaaaaagagatacatttctaggattcgaaagaggccgcgtcttcagattcaaaagctc |
38261154 |
T |
|
| Q |
388 |
gatgatggaacaactactcttgttcctgtcattgcttctattgatcagtcacatgct |
444 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||| | |||| ||||||||||| |
|
|
| T |
38261155 |
aatgatggaacaactacttttgttcctgttattgcttgtggtgataagtcacatgct |
38261211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 190 - 444
Target Start/End: Original strand, 38244654 - 38244911
Alignment:
| Q |
190 |
gatgatggtagaatccacagtctacctcacaataaacatggaccgtacacgtgtccagagtgcaacaaagtaatagcaacatcacagaaattcgctgctc |
289 |
Q |
| |
|
|||||||||| ||| ||||| ||||| ||| | ||||||||||| ||| | ||| | | ||||||||| || | | ||||||||| ||||| ||| || |
|
|
| T |
38244654 |
gatgatggtaaaattcacagcctaccacacgagaaacatggaccatacccatgttcccaatgcaacaaaatatttgaaacatcacaaaaatttgctaatc |
38244753 |
T |
|
| Q |
290 |
atg---catcaagtcactacaagactgaaagtgaagaagagagaaaaaagagatacatgtctaggatccgaaagagaccagatctccagattcaaaagct |
386 |
Q |
| |
|
||| ||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||| ||||||||||| ||| |||||||||||||| |
|
|
| T |
38244754 |
atgtttcatcaagtcactacaagttcgaaagtgaagaagacagaaaaaagagatacaattctaggattcgaaagagaccgcgtcttcagattcaaaagct |
38244853 |
T |
|
| Q |
387 |
cgatgatggaacaactactcttgttcctgtcattgcttctattgatcagtcacatgct |
444 |
Q |
| |
|
| ||||||||| ||||||| |||||||||| |||||| | |||| ||||||||||| |
|
|
| T |
38244854 |
caatgatggaagaactacttttgttcctgttgttgcttgtgctgataagtcacatgct |
38244911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 23109084 - 23108972
Alignment:
| Q |
27 |
gatggtgttgaatacttcttctgcttatgctcatcctagtatccttggaggctcgtcatcaaattcacaacaccctccatctgaggcaaacaatattgtt |
126 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||| || |||| |||||||| |||||| |||||||||| | ||||| | |||||||| || || |
|
|
| T |
23109084 |
gatgatgttgaatacttcttctgcttatgatcatcctggtctcctaggaggctcatcatcacattcacaacaactgtcatctcacacaaacaatgttctt |
23108985 |
T |
|
| Q |
127 |
gctactaatggtg |
139 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
23108984 |
gctactgatggtg |
23108972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 194 - 282
Target Start/End: Original strand, 23108612 - 23108700
Alignment:
| Q |
194 |
atggtagaatccacagtctacctcacaataaacatggaccgtacacgtgtccagagtgcaacaaagtaatagcaacatcacagaaattc |
282 |
Q |
| |
|
||||| ||||||| |||||||| |||||| |||||||||| |||| ||| || || ||||||||||| || |||||| || |||||| |
|
|
| T |
23108612 |
atggtggaatccatagtctaccacacaattaacatggaccatacatatgttcaaagagcaacaaagtattattaacatctcaaaaattc |
23108700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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