View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0598-INSERTION-7 (Length: 662)

Name: NF0598-INSERTION-7
Description: NF0598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0598-INSERTION-7
NF0598-INSERTION-7
[»] chr6 (35 HSPs)
chr6 (7-401)||(6584714-6585108)
chr6 (380-662)||(6585116-6585398)
chr6 (405-659)||(6402801-6403055)
chr6 (414-660)||(7119097-7119343)
chr6 (414-660)||(7131575-7131821)
chr6 (414-604)||(6594519-6594709)
chr6 (412-616)||(7994093-7994297)
chr6 (425-662)||(19632377-19632611)
chr6 (414-662)||(10579649-10579898)
chr6 (417-597)||(6596844-6597024)
chr6 (415-662)||(6415904-6416151)
chr6 (419-662)||(6432099-6432342)
chr6 (414-605)||(6394859-6395050)
chr6 (413-529)||(8913896-8914012)
chr6 (488-662)||(6423155-6423329)
chr6 (174-273)||(6590877-6590978)
chr6 (413-662)||(14820631-14820880)
chr6 (555-662)||(6603256-6603363)
chr6 (414-586)||(6589236-6589408)
chr6 (414-660)||(6409946-6410192)
chr6 (497-594)||(14802342-14802439)
chr6 (414-594)||(6426517-6426697)
chr6 (560-628)||(6586169-6586237)
chr6 (131-165)||(6590804-6590838)
chr6 (420-498)||(11936194-11936272)
chr6 (420-498)||(11948174-11948252)
chr6 (361-398)||(6596714-6596751)
chr6 (366-397)||(6423494-6423525)
chr6 (366-397)||(19632713-19632744)
chr6 (366-396)||(6416244-6416274)
chr6 (366-395)||(6410285-6410314)
chr6 (364-393)||(6602994-6603023)
chr6 (72-116)||(6411323-6411367)
chr6 (361-397)||(6432438-6432474)
chr6 (371-399)||(6589119-6589147)
[»] chr1 (3 HSPs)
chr1 (414-659)||(19468412-19468657)
chr1 (534-662)||(7554426-7554554)
chr1 (480-594)||(52082587-52082701)
[»] chr3 (6 HSPs)
chr3 (414-662)||(51113694-51113942)
chr3 (414-661)||(51764353-51764600)
chr3 (421-662)||(13470652-13470893)
chr3 (421-593)||(51120813-51120985)
chr3 (366-396)||(13470523-13470553)
chr3 (561-661)||(514788-514888)
[»] chr7 (8 HSPs)
chr7 (414-616)||(15092064-15092266)
chr7 (419-616)||(10614577-10614774)
chr7 (58-133)||(10613702-10613775)
chr7 (414-501)||(10170043-10170130)
chr7 (414-501)||(10177568-10177655)
chr7 (366-396)||(10614871-10614901)
chr7 (420-505)||(7977673-7977758)
chr7 (366-395)||(15091942-15091971)
[»] chr5 (5 HSPs)
chr5 (412-638)||(20477993-20478219)
chr5 (419-662)||(41889472-41889715)
chr5 (526-662)||(41901560-41901696)
chr5 (436-605)||(32267470-32267636)
chr5 (414-517)||(28525094-28525197)
[»] chr4 (24 HSPs)
chr4 (405-660)||(53761676-53761928)
chr4 (424-659)||(546854-547089)
chr4 (420-604)||(55908647-55908831)
chr4 (431-610)||(553469-553648)
chr4 (420-656)||(1548345-1548579)
chr4 (415-662)||(640853-641100)
chr4 (85-132)||(21836191-21836238)
chr4 (435-617)||(3438500-3438681)
chr4 (534-626)||(1513440-1513532)
chr4 (414-546)||(21834291-21834423)
chr4 (420-610)||(1524405-1524595)
chr4 (528-630)||(8184057-8184159)
chr4 (431-500)||(644930-644999)
chr4 (420-473)||(1600546-1600599)
chr4 (525-626)||(7307834-7307935)
chr4 (480-593)||(55505087-55505200)
chr4 (421-477)||(558621-558677)
chr4 (574-661)||(370859-370946)
chr4 (482-593)||(532196-532307)
chr4 (560-610)||(558488-558538)
chr4 (420-474)||(1489280-1489334)
chr4 (420-473)||(1533909-1533962)
chr4 (555-587)||(566202-566234)
chr4 (419-471)||(1519061-1519113)
[»] chr2 (2 HSPs)
chr2 (420-662)||(45245004-45245246)
chr2 (420-604)||(1037583-1037767)
[»] chr8 (7 HSPs)
chr8 (420-593)||(18315192-18315365)
chr8 (421-593)||(17636317-17636493)
chr8 (525-605)||(27922503-27922583)
chr8 (526-610)||(32151291-32151375)
chr8 (420-498)||(28246214-28246292)
chr8 (35-83)||(8537517-8537565)
chr8 (528-616)||(34936190-34936278)
[»] scaffold0807 (1 HSPs)
scaffold0807 (425-611)||(1388-1577)
[»] scaffold0295 (1 HSPs)
scaffold0295 (420-594)||(543-717)
[»] scaffold0041 (1 HSPs)
scaffold0041 (528-593)||(39191-39256)
[»] scaffold0014 (1 HSPs)
scaffold0014 (436-477)||(88939-88980)


Alignment Details
Target: chr6 (Bit Score: 371; Significance: 0; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 7 - 401
Target Start/End: Original strand, 6584714 - 6585108
Alignment:
Q  7 aaaatatttaatgaaaaaaccattgtctttgcaagattatttcaatttttcttttcttatatatgatttttgaaaagcttattcatactgacacatgtag 106  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6584714 aaaatatttaatgaaaacaccattgtctttgcaagattatttcaatttttcttttcttatatatgatttttgaaaagcttattcatacggacacatgtag 6584813  T
Q  107 aacactaaaccaatgtgactcacattgaaagttatctacatattatgtaaaatggtgtcattaagtaaaatgatgaatcttgtcaagttgaagagttcct 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6584814 aacactaaaccaatgtgactcacattgaaagttatctacatattatgtaaaatggtgtcattaagtaaaatgatgaatcttgtcaagctgaagagttcct 6584913  T
Q  207 ggcttgtgcagttactcaaaatacatacaaactatacaatcattgccaagcttagaccatgcaatctgcctcacctccctcaacctctcgcactacagcc 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6584914 ggcttgtgcagttactcaaaatacatacaaactatacaatcattgcctagcttagaccatgcaatctgcctcacctccctcaacctctcgcactacagcc 6585013  T
Q  307 ataacttcgacaggctattgggaaaaacagtgcagcgaattctaattctttgaatgatatataccctcaattaaagtctctctatttgggtaatt 401  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6585014 ataacctcgacaggctattgggaaaaacagtgtagcgaattctaattctttgaatgatatataccctcaattaaagtctctctatttgggtaatt 6585108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 380 - 662
Target Start/End: Original strand, 6585116 - 6585398
Alignment:
Q  380 aagtctctctatttgggtaatttgctgcgatagtatatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactgga 479  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  6585116 aagtctctctatttgggtaatttgctgcgatagtatatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaactttactggg 6585215  T
Q  480 tgttcaagagtgaagctacttggaataaactttttagttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtga 579  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  6585216 tgttcaagagtgaagctacttggaataaactttttagttacccagttggaggtattgaacttgtcagatacaaaggttgatgatgaaacactctatgtga 6585315  T
Q  580 tctcaaagagttgttctgcgcttttggaactattactgaaaggttgtgaaaatgtcacatagaagggactgaaacatgtggta 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6585316 tctcaaagagttgttctgcgcttttggaactattactgaaaggttgtgaaaatgtcacagagaagggactgaaacatgtggta 6585398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 405 - 659
Target Start/End: Complemental strand, 6403055 - 6402801
Alignment:
Q  405 tgcgatagtatatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaa 504  Q
    |||||| |||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6403055 tgcgatcgtatatctgaaggtatttgtcaagttttaaggagatgttgtaacattaggcatttgaacttaactgggtgttcaagagtgaagctacttggaa 6402956  T
Q  505 taaactttttagttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgctttt 604  Q
    ||||||||  |||| ||||  | || || ||||||||||||||| | ||||||| ||||||||||||||||||||||||||||| ||||  || ||||||    
T  6402955 taaactttgcagttccccaactagaagtgttgaacttgtcagatacgaaggttgatgatgaaacactctatgtgatctcaaagaattgtagtgggctttt 6402856  T
Q  605 ggaactattactgaaaggttgtgaaaatgtcacatagaagggactgaaacatgtg 659  Q
    | |||||||| ||| || |||| | ||||||||| | ||||||  ||||||||||    
T  6402855 gaaactattattgagagattgttataatgtcacagaaaagggagcgaaacatgtg 6402801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 414 - 660
Target Start/End: Complemental strand, 7119343 - 7119097
Alignment:
Q  414 atatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttt 513  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||  |||||||||||| |    |||||||||||||||||||||||||| ||||||     
T  7119343 atatctgaaggtatttgtcaagttttaaggagatgttctaagattaaacatttgaacttagcccactgttcaagagtgaagctacttggaatgaactttg 7119244  T
Q  514 tagttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactatt 613  Q
    | |||  |||| ||||||| ||||||||||||||| | ||||||| ||||||||||||| |||||||||| |||| |||||  | |||||||||||||||    
T  7119243 ttgttcaccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcgggcttttggaactatt 7119144  T
Q  614 actgaaaggttgtgaaaatgtcacatagaagggactgaaacatgtgg 660  Q
    |||||||| |||| |  |||||||| | || | | ||||||||||||    
T  7119143 actgaaagattgttattatgtcacaaaaaaagaagtgaaacatgtgg 7119097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 414 - 660
Target Start/End: Complemental strand, 7131821 - 7131575
Alignment:
Q  414 atatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttt 513  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||  |||||||||||| |    |||||||||||||||||||||||||| ||||||     
T  7131821 atatctgaaggtatttgtcaagttttaaggagatgttctaagattaaacatttgaacttagcccactgttcaagagtgaagctacttggaatgaactttg 7131722  T
Q  514 tagttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactatt 613  Q
    | |||  |||| ||||||| ||||||||||||||| | ||||||| ||||||||||||| |||||||||| |||| |||||  | |||||||||||||||    
T  7131721 ttgttcgccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcgggcttttggaactatt 7131622  T
Q  614 actgaaaggttgtgaaaatgtcacatagaagggactgaaacatgtgg 660  Q
    |||||||| |||| |  |||||||| | || | | ||||||||||||    
T  7131621 actgaaagattgttattatgtcacaaacaaagcagtgaaacatgtgg 7131575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 414 - 604
Target Start/End: Original strand, 6594519 - 6594709
Alignment:
Q  414 atatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttt 513  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||  |||||| ||||| | || ||||||||||||||||||| ||||||||||||||    
T  6594519 atatctgaaggtatttgtcaagttttaaggagatgttataagattacacatttgtacttatccgggtgttcaagagtgaagctacatggaataaactttt 6594618  T
Q  514 tagttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgctttt 604  Q
    ||||| || |  ||||||| ||| |||||||| || || |||||| |||||| |||||   |||||||||||||| ||||| || ||||||    
T  6594619 tagttcccaaactggaggtgttgtacttgtcaaatacagaggttgatgatgagacactacgtgtgatctcaaagaattgttgtgggctttt 6594709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 412 - 616
Target Start/End: Original strand, 7994093 - 7994297
Alignment:
Q  412 gtatatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactt 511  Q
    |||||||||||||||||||| | |||||||||| ||||| ||| || |||||||||||| || | |  ||| |||||||||||||||| ||||| |||||    
T  7994093 gtatatctgaaggtatttgttacgttttaaggaaatgttgtaagatcaggcatttgaacatagccgattgtacaagagtgaagctactaggaatgaactt 7994192  T
Q  512 tttagttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaacta 611  Q
    | ||||| |  || | ||||| |||||| ||||| || ||| ||||  ||| |||||||| |||||||||||||||| ||||||||  |||||| |||||    
T  7994193 tgtagttccgaagctagaggtgttgaacatgtcaaatacaagggttaatgacgaaacactatatgtgatctcaaagaattgttctggacttttgcaacta 7994292  T
Q  612 ttact 616  Q
    |||||    
T  7994293 ttact 7994297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 425 - 662
Target Start/End: Complemental strand, 19632611 - 19632377
Alignment:
Q  425 tatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttttagttacccag 524  Q
    ||||||||| ||||||||   ||||| ||| || | |||||||||||||||| ||||||||| ||| || |||||||||||||||||| ||||| || ||    
T  19632611 tatttgtcaagttttaag---atgttgtaagataacgcatttgaacttaactcgatgttcaatagttaacctacttggaataaactttctagttcccaag 19632515  T
Q  525 ttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactattactgaaaggtt 624  Q
     | ||||| ||| |||||||  || ||||||||| ||||||   ||| | |||||||||||||| ||||| || ||||||| |||| |||||||||  ||    
T  19632514 ctagaggtgttggacttgtcgtatacaaaggttgatgatgagcaactttttgtgatctcaaagaattgttgtgggcttttgcaactcttactgaaaaatt 19632415  T
Q  625 gtgaaaatgtcacatagaagggactgaaacatgtggta 662  Q
    |||  ||| ||||| |||||||| ||||||| ||||||    
T  19632414 gtgctaatatcacagagaagggagtgaaacacgtggta 19632377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 414 - 662
Target Start/End: Original strand, 10579649 - 10579898
Alignment:
Q  414 atatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttt 513  Q
    |||||||||||||||| ||| |||| | | ||||||  ||| |||| ||||||||||||| |   |||| |||||||||||| |||| |||||||  ||     
T  10579649 atatctgaaggtatttttcaagtttcaggaagatgtggtaagattaagcatttgaacttagccaaatgtccaagagtgaagcgacttagaataaagattg 10579748  T
Q  514 tagttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaacta-t 612  Q
    || || ||||| ||||||| |||||||||||| || |||| |||| |||| |||||||||||  ||||||||||| ||||| |  ||||||||||||| |    
T  10579749 taattccccagctggaggtgttgaacttgtcatatacaaaagttgatgataaaacactctattcgatctcaaagaattgttgtcggcttttggaactatt 10579848  T
Q  613 tactgaaaggttgtgaaaatgtcacatagaagggactgaaacatgtggta 662  Q
    ||||||||   ||| |||  |||||| |||||||| | ||||||||||||    
T  10579849 tactgaaaaactgtaaaagggtcacaaagaagggagttaaacatgtggta 10579898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 417 - 597
Target Start/End: Original strand, 6596844 - 6597024
Alignment:
Q  417 tctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttttag 516  Q
    ||||||||||||||||| ||||| |||||||||  ||| |||| ||||||||||| | | | ||||||||| ||||||| ||||| ||||||||||  |     
T  6596844 tctgaaggtatttgtcaagttttcaggagatgtgataagattaagcatttgaactgagccgaatgttcaagtgtgaagcgacttgaaataaactttgaaa 6596943  T
Q  517 ttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctg 597  Q
    || ||||| ||||||| ||||||||||||  | |||| |||| ||||||||||||||| |  |||||||||| ||||||||    
T  6596944 ttccccagctggaggtgttgaacttgtcaagtacaaatgttgatgatgaaacactctacgctatctcaaagaattgttctg 6597024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 415 - 662
Target Start/End: Complemental strand, 6416151 - 6415904
Alignment:
Q  415 tatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaacttttt 514  Q
    ||||||||||||||||||| ||||||| || ||||| ||| ||| |||||||||||||| |    |||  || ||||||||||| ||||||  ||||| |    
T  6416151 tatctgaaggtatttgtcaagttttaaagatatgttgtaagattgggcatttgaacttagccttttgtaaaaaagtgaagctacatggaatggactttgt 6416052  T
Q  515 agttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactatta 614  Q
    |||| || |  ||||||| |||||||||||| || ||||||||  |||| |||| ||||||||||||||||||| ||||   | ||||||| ||||||||    
T  6416051 agttcccaacctggaggtgttgaacttgtcaaatacaaaggttaatgataaaactctctatgtgatctcaaagaattgtagcgggcttttgcaactatta 6415952  T
Q  615 ctgaaaggttgtgaaaatgtcacatagaagggactgaaacatgtggta 662  Q
    ||  ||  |||||| ||||||||| |   |||| ||||||||||||||    
T  6415951 cttgaattttgtgataatgtcacagaagtgggagtgaaacatgtggta 6415904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 419 - 662
Target Start/End: Complemental strand, 6432342 - 6432099
Alignment:
Q  419 tgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttttagtt 518  Q
    ||||||||||||||| |||||||||||||||| |||  |||  |||||||||||| |    |||  || ||||||||||| |||||| ||||||  ||||    
T  6432342 tgaaggtatttgtcaagttttaaggagatgttgtaaacttaaacatttgaacttagcctattgtataaaagtgaagctacatggaatgaactttgaagtt 6432243  T
Q  519 acccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactattactga 618  Q
     || || || |||| |||||||||||| || |||  |||| |||||||||||| |||||||||| ||||| ||||| || |||| || ||||||| |||     
T  6432242 cccaagctgaaggtgttgaacttgtcaaatacaagcgttgatgatgaaacactttatgtgatcttaaagaattgttgtgggcttctgcaactattcctgt 6432143  T
Q  619 aaggttgtgaaaatgtcacatagaagggactgaaacatgtggta 662  Q
    |   |||||| ||||||||| |||||||| |||||| |||||||    
T  6432142 acaattgtgataatgtcacacagaagggagtgaaacttgtggta 6432099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 414 - 605
Target Start/End: Complemental strand, 6395050 - 6394859
Alignment:
Q  414 atatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttt 513  Q
    |||||||||||||||||||| ||||||| || ||||| |||  |||  |||||||||||| ||   ||||||| |||||| |||| |||||| ||||||     
T  6395050 atatctgaaggtatttgtcaagttttaaagaaatgttgtaagcttaaacatttgaacttagctttctgttcaaaagtgaaactacatggaatgaactttg 6394951  T
Q  514 tagttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttg 605  Q
     |||| || || ||||||| |||||||||||| || |||  |||| ||||||||| || | |||||||||||||| ||||| || |||||||    
T  6394950 cagttcccgagctggaggtgttgaacttgtcaaatacaagcgttgatgatgaaactctttctgtgatctcaaagaattgttgtgggcttttg 6394859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 413 - 529
Target Start/End: Original strand, 8913896 - 8914012
Alignment:
Q  413 tatatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaacttt 512  Q
    ||||||| ||||||||||||| |||||||| ||||||| ||| ||||  |||||||||||   |||||| ||||||||||||||||||| ||||||||||    
T  8913896 tatatctaaaggtatttgtcaagttttaagaagatgttgtaagattaaacatttgaacttcgttggatgatcaagagtgaagctacttgcaataaacttt 8913995  T
Q  513 ttagttacccagttgga 529  Q
     ||||| || |||||||    
T  8913996 gtagttcccaagttgga 8914012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 488 - 662
Target Start/End: Complemental strand, 6423329 - 6423155
Alignment:
Q  488 agtgaagctacttggaataaactttttagttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaag 587  Q
    ||||||||||| || ||| ||||||| |||| || || ||||||| |||||||||||| || |||  ||| | ||| |||||||||||| ||||||||||    
T  6423329 agtgaagctacgtgcaatgaacttttaagttcccaagctggaggtgttgaacttgtcaaatacaagagttagcgataaaacactctatgcgatctcaaag 6423230  T
Q  588 agttgttctgcgcttttggaactattactgaaaggttgtgaaaatgtcacatagaagggactgaaacatgtggta 662  Q
    ||||||| || | ||||| ||||||||||  ||| ||||||  |||| ||| | || |||||||||| |||||||    
T  6423229 agttgttgtgggattttgcaactattacttgaagattgtgattatgtaacaaacaaaggactgaaacgtgtggta 6423155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 174 - 273
Target Start/End: Original strand, 6590877 - 6590978
Alignment:
Q  174 aaatgatgaatcttgtcaagttgaagagtt--cctggcttgtgcagttactcaaaatacatacaaactatacaatcattgccaagcttagaccatgcaat 271  Q
    ||||||||||| |||||||| |||| ||||  || |||||||| ||||||||| ||||||  |||||||||||||||||||| |||||||||||||||||    
T  6590877 aaatgatgaattttgtcaagatgaacagttgcccaggcttgtgtagttactcacaatacaagcaaactatacaatcattgcctagcttagaccatgcaat 6590976  T
Q  272 ct 273  Q
    ||    
T  6590977 ct 6590978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 413 - 662
Target Start/End: Complemental strand, 14820880 - 14820631
Alignment:
Q  413 tatatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaacttt 512  Q
    ||||||||||||||||||||| | |||||||| ||||| |||  |||  ||||||||||||      |||||| ||||||| |||| |||||| ||||||    
T  14820880 tatatctgaaggtatttgtcaaggtttaaggaaatgttgtaagcttaaacatttgaacttagaattttgttcaggagtgaaactacatggaattaacttt 14820781  T
Q  513 ttagttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactat 612  Q
      |||| || |||| ||||| |||||||| ||| || ||||||||| | |||||||||| ||| ||||||| |||| ||||| || |||||||  | |||    
T  14820780 gcagttcccaagttagaggtgttgaacttatcaaatacaaaggttgataatgaaacactttatatgatctccaagaattgttgtgggcttttgcgattat 14820681  T
Q  613 tactgaaaggttgtgaaaatgtcacatagaagggactgaaacatgtggta 662  Q
    ||||  ||   ||| |  |||||||| |||||||  ||||||||||||||    
T  14820680 tacttgaaaaatgtaatgatgtcacagagaagggtgtgaaacatgtggta 14820631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 555 - 662
Target Start/End: Original strand, 6603256 - 6603363
Alignment:
Q  555 gttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactattactgaaaggttgtgaaaatgtcacatagaagggactgaaac 654  Q
    |||| |||||||||| |||||| |||||||||||||||| ||| |||||||||||||||| |||||  |||| |  |||||||| |||| ||| ||||||    
T  6603256 gttgatgatgaaacagtctatgcgatctcaaagagttgtcctgggcttttggaactattattgaaatattgttattatgtcacagagaaaggagtgaaac 6603355  T
Q  655 atgtggta 662  Q
    ||||||||    
T  6603356 atgtggta 6603363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 414 - 586
Target Start/End: Original strand, 6589236 - 6589408
Alignment:
Q  414 atatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttt 513  Q
    |||||| ||||||||||||| || || || ||||||| ||| |||||||||||||||||| |    |||   | |||||||||||||||||| ||||||     
T  6589236 atatctaaaggtatttgtcaagtattgagaagatgttgtaagattaggcatttgaacttagccttctgtaagaaagtgaagctacttggaatgaactttg 6589335  T
Q  514 tagttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaa 586  Q
    ||||| ||  | ||||||| |||||||||||| || |||| |||  |||| ||||||| ||| ||||||||||    
T  6589336 tagttcccatgctggaggtgttgaacttgtcaaatacaaatgttaatgataaaacactatatctgatctcaaa 6589408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 414 - 660
Target Start/End: Complemental strand, 6410192 - 6409946
Alignment:
Q  414 atatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttt 513  Q
    |||||||||||||||||||| ||||||  || ||||| |||  ||| ||||||| ||||| |    ||   || ||||||||||| |||||| ||||||     
T  6410192 atatctgaaggtatttgtcaagttttacagaaatgttgtaagcttaagcatttggacttagcctattgcaaaaaagtgaagctacatggaatgaactttg 6410093  T
Q  514 tagttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactatt 613  Q
     |||| || || || |||| ||||||| |||| || |||  |||| ||||||||| || |||||||||||||||| ||||| |  ||||||| |||||||    
T  6410092 aagttcccaagctgaaggtgttgaactagtcaaatacaagcgttgatgatgaaactctttatgtgatctcaaagaattgttgtcggcttttgcaactatt 6409993  T
Q  614 actgaaaggttgtgaaaatgtcacatagaagggactgaaacatgtgg 660  Q
      || |    ||||| ||||||||| |||||||| ||||||||||||    
T  6409992 tttgtacaactgtgataatgtcacacagaagggagtgaaacatgtgg 6409946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 497 - 594
Target Start/End: Complemental strand, 14802439 - 14802342
Alignment:
Q  497 acttggaataaactttttagttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgtt 594  Q
    ||||||||  ||||||  |||| || || |||| || ||||| |||||| || ||||||||| ||||||||||||||||||||| ||||||| |||||    
T  14802439 acttggaactaactttgaagttcccaagatggaagtgttgaatttgtcaaatacaaaggttgatgatgaaacactctatgtgatttcaaagaattgtt 14802342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 414 - 594
Target Start/End: Complemental strand, 6426697 - 6426517
Alignment:
Q  414 atatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttt 513  Q
    |||||||||||||||||| | |||||||||| ||||| |||  |||  |||||||||||| ||   |||||||  ||||| |||| |||||| ||||||     
T  6426697 atatctgaaggtatttgtgaagttttaaggaaatgttgtaagcttaaacatttgaacttagctttctgttcaaacgtgaaactacatggaatgaactttg 6426598  T
Q  514 tagttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgtt 594  Q
     |||| || || ||||||| ||||| |||||| |  |||   ||| |||||||||  | |||| ||||||||||| |||||    
T  6426597 cagttcccgagctggaggtgttgaatttgtcaaacacaagcattgatgatgaaactttttatgcgatctcaaagaattgtt 6426517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 560 - 628
Target Start/End: Original strand, 6586169 - 6586237
Alignment:
Q  560 tgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactattactgaaaggttgtga 628  Q
    |||||||||||||| || ||||||||||| |||| ||  |||||||||||||| ||||| |||||||||    
T  6586169 tgatgaaacactctgtgcgatctcaaagatttgtcctaggcttttggaactatcactgataggttgtga 6586237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 165
Target Start/End: Original strand, 6590804 - 6590838
Alignment:
Q  131 ttgaaagttatctacatattatgtaaaatggtgtc 165  Q
    |||||||||||||||||||||||||||||||||||    
T  6590804 ttgaaagttatctacatattatgtaaaatggtgtc 6590838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 498
Target Start/End: Original strand, 11936194 - 11936272
Alignment:
Q  420 gaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctac 498  Q
    |||||||||  ||||||||||| || ||||| ||| ||||| |||||||| |||||| | ||||||||| |||||||||    
T  11936194 gaaggtattgttcatgttttaatgatatgttgtaacattagacatttgaatttaactcgctgttcaagactgaagctac 11936272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 498
Target Start/End: Original strand, 11948174 - 11948252
Alignment:
Q  420 gaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctac 498  Q
    |||||||||  ||||||||||| || ||||| ||| ||||| |||||||| |||||| | ||||||||| |||||||||    
T  11948174 gaaggtattgttcatgttttaatgatatgttgtaacattagacatttgaatttaactcgctgttcaagactgaagctac 11948252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 361 - 398
Target Start/End: Original strand, 6596714 - 6596751
Alignment:
Q  361 tgatatataccctcaattaaagtctctctatttgggta 398  Q
    |||| |||||||||||||||||||||||||||||||||    
T  6596714 tgatgtataccctcaattaaagtctctctatttgggta 6596751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 366 - 397
Target Start/End: Complemental strand, 6423525 - 6423494
Alignment:
Q  366 tataccctcaattaaagtctctctatttgggt 397  Q
    ||||||||||||||||||||||||||||||||    
T  6423525 tataccctcaattaaagtctctctatttgggt 6423494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 366 - 397
Target Start/End: Complemental strand, 19632744 - 19632713
Alignment:
Q  366 tataccctcaattaaagtctctctatttgggt 397  Q
    ||||||||||||||||||||||||||||||||    
T  19632744 tataccctcaattaaagtctctctatttgggt 19632713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 366 - 396
Target Start/End: Complemental strand, 6416274 - 6416244
Alignment:
Q  366 tataccctcaattaaagtctctctatttggg 396  Q
    |||||||||||||||||||||||||||||||    
T  6416274 tataccctcaattaaagtctctctatttggg 6416244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 395
Target Start/End: Complemental strand, 6410314 - 6410285
Alignment:
Q  366 tataccctcaattaaagtctctctatttgg 395  Q
    ||||||||||||||||||||||||||||||    
T  6410314 tataccctcaattaaagtctctctatttgg 6410285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 393
Target Start/End: Original strand, 6602994 - 6603023
Alignment:
Q  364 tatataccctcaattaaagtctctctattt 393  Q
    ||||||||||||||||||||||||||||||    
T  6602994 tatataccctcaattaaagtctctctattt 6603023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 6411367 - 6411323
Alignment:
Q  72 atttttgaaaagcttattcatactgacacatgtagaacactaaac 116  Q
    ||||| |||||| |||||||||| ||| |||||||||||||||||    
T  6411367 attttcgaaaagtttattcataccgactcatgtagaacactaaac 6411323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 361 - 397
Target Start/End: Complemental strand, 6432474 - 6432438
Alignment:
Q  361 tgatatataccctcaattaaagtctctctatttgggt 397  Q
    |||| |||||||||| |||||||||||||||||||||    
T  6432474 tgatgtataccctcagttaaagtctctctatttgggt 6432438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 399
Target Start/End: Original strand, 6589119 - 6589147
Alignment:
Q  371 cctcaattaaagtctctctatttgggtaa 399  Q
    |||||||||||||||||||||||||||||    
T  6589119 cctcaattaaagtctctctatttgggtaa 6589147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 4e-43; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 414 - 659
Target Start/End: Original strand, 19468412 - 19468657
Alignment:
Q  414 atatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttt 513  Q
    ||||| ||||| |||||||| ||||||||||| |||| ||||||||||||||| |||||| |    |||||||||||||| ||||||||| | ||||||     
T  19468412 atatcggaaggcatttgtcaagttttaaggaggtgttctaatattaggcatttaaacttagcccactgttcaagagtgaatctacttggagtgaactttg 19468511  T
Q  514 tagttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactatt 613  Q
    ||||| || || ||||||| ||||| ||||||||| ||||||||| |||||||||||| ||||||||||||||||  |||| ||  ||||||||| ||||    
T  19468512 tagttcccaagctggaggtgttgaagttgtcagatacaaaggttgatgatgaaacactttatgtgatctcaaagaactgttgtggacttttggaattatt 19468611  T
Q  614 actgaaaggttgtgaaaatgtcacatagaagggactgaaacatgtg 659  Q
      || | |||||| |  |||||||| |||| ||| |||||||||||    
T  19468612 tgtggacggttgtaatgatgtcacagagaaaggagtgaaacatgtg 19468657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 534 - 662
Target Start/End: Complemental strand, 7554554 - 7554426
Alignment:
Q  534 ttgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactattactgaaaggttgtgaaaatg 633  Q
    |||||||| ||| || |||  |||| ||||||| |||||||| |||||||||||||||||  ||  |||||  |||| ||||||||||| ||||| ||||    
T  7554554 ttgaacttatcatatacaagtgttgatgatgaagcactctatatgatctcaaagagttgtggtggacttttacaactgttactgaaaggatgtgataatg 7554455  T
Q  634 tcacatagaagggactgaaacatgtggta 662  Q
    ||||| | |||||| |||| |||||||||    
T  7554454 tcacagaaaagggagtgaagcatgtggta 7554426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 52082701 - 52082587
Alignment:
Q  480 tgttcaagagtgaagctacttggaataaactttttagttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtga 579  Q
    ||||||| | |||| ||||||  ||| ||||||  |||| || | |||||||| |||||||||||| |  ||||  ||| |||||||||| | |||||||    
T  52082701 tgttcaacactgaatctactttcaatgaactttcaagtttccaaattggaggtgttgaacttgtcaaagacaaaaattgatgatgaaacattgtatgtga 52082602  T
Q  580 tctcaaagagttgtt 594  Q
    |||||||||||||||    
T  52082601 tctcaaagagttgtt 52082587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 1e-42; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 414 - 662
Target Start/End: Original strand, 51113694 - 51113942
Alignment:
Q  414 atatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttt 513  Q
    ||||| |||||||||||||| ||||||| |||||||| ||| |||||||||||||| ||| ||   ||||||| | |||||||||||||||| ||||||     
T  51113694 atatccgaaggtatttgtcaagttttaaagagatgttgtaaaattaggcatttgaaattagcttactgttcaaaactgaagctacttggaatgaactttg 51113793  T
Q  514 tagttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactatt 613  Q
     || | || |  ||||||| ||  |||||||| || ||| ||||| |||||||||||||||||||||||| |||||||||| || ||||||| |||| ||    
T  51113794 aagctcccaaactggaggtgttagacttgtcaaatacaatggttgatgatgaaacactctatgtgatctcgaagagttgttgtgggcttttgcaactgtt 51113893  T
Q  614 actgaaaggttgtgaaaatgtcacatagaagggactgaaacatgtggta 662  Q
    |||||||  |||| |  |||||||| |||||||| |||| |||||||||    
T  51113894 actgaaaaattgttaccatgtcacagagaagggagtgaagcatgtggta 51113942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 414 - 661
Target Start/End: Original strand, 51764353 - 51764600
Alignment:
Q  414 atatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttt 513  Q
    |||||| ||||| | ||| | |||||||||||||||| ||| ||||||||||||||| || | | ||||||||||||||||||||||||||| ||||||     
T  51764353 atatctaaaggtgtctgtgaagttttaaggagatgttctaagattaggcatttgaacctatccgaatgttcaagagtgaagctacttggaatgaactttg 51764452  T
Q  514 tagttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactatt 613  Q
     |||| |  || ||||||| ||  ||||||||  | |||| |||| |||| |||||||||||| ||||||||||| |||||  | ||||||| |||||||    
T  51764453 cagttccgaagctggaggtgttagacttgtcatttacaaaagttgatgataaaacactctatgcgatctcaaagaattgttgcgggcttttgcaactatt 51764552  T
Q  614 actgaaaggttgtgaaaatgtcacatagaagggactgaaacatgtggt 661  Q
    |||| ||  |||||| |||||||   |||||||| |||||||||||||    
T  51764553 actggaacattgtgataatgtcaaggagaagggagtgaaacatgtggt 51764600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 421 - 662
Target Start/End: Original strand, 13470652 - 13470893
Alignment:
Q  421 aaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttttagttac 520  Q
    ||||||||||||| |||||||||| ||||| ||| |||||||||||||||||| |    |||  || |||||||||||||||||| |||||| | ||| |    
T  13470652 aaggtatttgtcaagttttaaggatatgttgtaagattaggcatttgaacttagcctattgtaaaaaagtgaagctacttggaatgaactttgttgttcc 13470751  T
Q  521 ccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactattactgaaa 620  Q
    | |  ||||||| |||||||||||| || ||||||||  |||| ||||||||||| |||||||||||| ||||| || ||||||| ||||||||||  ||    
T  13470752 caatctggaggtgttgaacttgtcaaatacaaaggttaatgataaaacactctatatgatctcaaagaattgttgtgggcttttgcaactattacttgaa 13470851  T
Q  621 ggttgtgaaaatgtcacatagaagggactgaaacatgtggta 662  Q
      |||| | ||||||||| |  ||||| ||||||||||||||    
T  13470852 ctttgtcataatgtcacagaagagggagtgaaacatgtggta 13470893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 421 - 593
Target Start/End: Original strand, 51120813 - 51120985
Alignment:
Q  421 aaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttttagttac 520  Q
    |||||||| ||  ||||||| ||||||||| ||| ||||| || |||||||| || || |||||||||||||| || | |||||| ||||||  ||||      
T  51120813 aaggtattggttgtgttttatggagatgttgtaacattagacacttgaacttcaccggttgttcaagagtgaaactgcatggaatgaactttgaagttct 51120912  T
Q  521 ccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgt 593  Q
    | | |||||||| |||||||||||  || |||  |||| |||||||| ||| ||||| |||||||||||||||    
T  51120913 caaattggaggtgttgaacttgtcgcatacaagagttgatgatgaaaaactatatgtaatctcaaagagttgt 51120985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 366 - 396
Target Start/End: Original strand, 13470523 - 13470553
Alignment:
Q  366 tataccctcaattaaagtctctctatttggg 396  Q
    |||||||||||||||||||||||||||||||    
T  13470523 tataccctcaattaaagtctctctatttggg 13470553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 561 - 661
Target Start/End: Original strand, 514788 - 514888
Alignment:
Q  561 gatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactattactgaaaggttgtgaaaatgtcacatagaagggactgaaacatgtgg 660  Q
    |||||| ||||  |||||||||| |||||||| | || ||||||| ||||||||||| ||  |||||||  | ||||| ||| |||| |||| |||||||    
T  514788 gatgaagcacttcatgtgatctcgaagagttgctgtgggcttttgcaactattactgcaaaattgtgaaggtatcacagagacgggagtgaagcatgtgg 514887  T
Q  661 t 661  Q
    |    
T  514888 t 514888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 1e-36; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 414 - 616
Target Start/End: Original strand, 15092064 - 15092266
Alignment:
Q  414 atatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttt 513  Q
    |||||| ||||||||| ||| |||||||||| ||||| |||  |||  |||||||||||||||||||||| ||| ||||| |||| |||||| ||||||     
T  15092064 atatctcaaggtatttctcaagttttaaggaaatgttataagcttaaacatttgaacttaactggatgtttaagtgtgaaactacatggaatgaactttg 15092163  T
Q  514 tagttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactatt 613  Q
     |||| || || ||||||| ||||| ||||||||  ||||||||  |||| |||||||||||| ||||||||||| ||||| || ||||||| |||||||    
T  15092164 cagttcccgagctggaggtgttgaatttgtcagaaacaaaggttaatgataaaacactctatgcgatctcaaagaattgttgtgggcttttgcaactatt 15092263  T
Q  614 act 616  Q
    |||    
T  15092264 act 15092266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 419 - 616
Target Start/End: Complemental strand, 10614774 - 10614577
Alignment:
Q  419 tgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttttagtt 518  Q
    ||||||||||||||| |||||||||| ||||| ||| |||||||||||||||||| |    |||  || |||||||||||||||||| ||| || | |||    
T  10614774 tgaaggtatttgtcaagttttaaggatatgttgtaagattaggcatttgaacttagcctattgtaaaaaagtgaagctacttggaatgaacgttgttgtt 10614675  T
Q  519 acccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactattact 616  Q
     || |  ||||||| |||||||||||| || | ||||||  |||| ||||||||||||||||||| ||||  |||  || ||||||| ||||||||||    
T  10614674 cccaatctggaggtgttgaacttgtcaaatacgaaggttaatgataaaacactctatgtgatctcgaagaactgtagtgggcttttgcaactattact 10614577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 58 - 133
Target Start/End: Complemental strand, 10613775 - 10613702
Alignment:
Q  58 ttttcttatatatgatttttgaaaagcttattcatactgacacatgtagaacactaaaccaatgtgactcacattg 133  Q
    ||||||||||||||||||| |||||| ||||| ||||||  ||  ||||||||||||||| |||||||||||||||    
T  10613775 ttttcttatatatgattttcgaaaagtttatttatactg--actagtagaacactaaacctatgtgactcacattg 10613702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 501
Target Start/End: Original strand, 10170043 - 10170130
Alignment:
Q  414 atatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttg 501  Q
    ||||| ||||| |||||||| ||||||||||| |||| ||||||||||||||| || ||| |    |||||||||||||| |||||||    
T  10170043 atatcggaaggcatttgtcaagttttaaggaggtgttctaatattaggcatttaaatttagcccactgttcaagagtgaatctacttg 10170130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 501
Target Start/End: Original strand, 10177568 - 10177655
Alignment:
Q  414 atatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttg 501  Q
    ||||| ||||| |||||||| ||||||||||| |||| ||||||||||||||| || ||| |    |||||||||||||| |||||||    
T  10177568 atatcggaaggcatttgtcaagttttaaggaggtgttctaatattaggcatttaaatttagcccactgttcaagagtgaatctacttg 10177655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 366 - 396
Target Start/End: Complemental strand, 10614901 - 10614871
Alignment:
Q  366 tataccctcaattaaagtctctctatttggg 396  Q
    |||||||||||||||||||||||||||||||    
T  10614901 tataccctcaattaaagtctctctatttggg 10614871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 505
Target Start/End: Complemental strand, 7977758 - 7977673
Alignment:
Q  420 gaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaat 505  Q
    ||||||||| |||| |||||||||||||||| ||| ||||| ||||| ||| || |  | |||||||| ||||| |||| ||||||    
T  7977758 gaaggtattggtcaagttttaaggagatgttgtaacattagacatttaaacctagcctgttgttcaagggtgaatctacgtggaat 7977673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 395
Target Start/End: Original strand, 15091942 - 15091971
Alignment:
Q  366 tataccctcaattaaagtctctctatttgg 395  Q
    ||||||||||||||||||||||||||||||    
T  15091942 tataccctcaattaaagtctctctatttgg 15091971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 3e-34; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 412 - 638
Target Start/End: Original strand, 20477993 - 20478219
Alignment:
Q  412 gtatatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactt 511  Q
    |||||||||||| |||||||||  | |||| |||||||| |||  | ||||||||||||||| ||||||||  ||||| ||||||||||||||||||| |    
T  20477993 gtatatctgaagatatttgtcaattcttaacgagatgttgtaagttaaggcatttgaacttagctggatgtcgaagagcgaagctacttggaataaacgt 20478092  T
Q  512 tttagttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaacta 611  Q
    | || || ||||| ||||||| |||||||||||| || |||| |||| ||| |||||| | | ||||||||||| || ||||| || ||||||| || ||    
T  20478093 tgtaattccccagctggaggtgttgaacttgtcatatacaaatgttgatgacgaaacattatctgtgatctcaaggaattgttgtgggcttttgcaaata 20478192  T
Q  612 ttactgaaaggttgtgaaaatgtcaca 638  Q
     ||||||||  ||| || |||||||||    
T  20478193 ctactgaaaaattgcgataatgtcaca 20478219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 419 - 662
Target Start/End: Original strand, 41889472 - 41889715
Alignment:
Q  419 tgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttttagtt 518  Q
    ||||||||||  ||| |||||||||| ||||| ||| |||||  ||||||||||| | |||||||||| |||||||||||||| ||| ||||||  ||||    
T  41889472 tgaaggtattactcaagttttaaggatatgttgtaacattagatatttgaacttatccggatgttcaatagtgaagctacttgaaatgaactttaaagtt 41889571  T
Q  519 acccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactattactga 618  Q
     || | |||||||| |||||||| ||| || |||| |||| |||||||||||| |||  |||||||||||||||||  | ||||| | || | ||||| |    
T  41889572 cccaaattggaggtgttgaacttatcatatacaaaagttgatgatgaaacactttataagatctcaaagagttgttgcgggctttcgaaattgttactta 41889671  T
Q  619 aaggttgtgaaaatgtcacatagaagggactgaaacatgtggta 662  Q
    ||  |||| |  |||||||| |||||||| |||| |||||||||    
T  41889672 aaaattgttatgatgtcacaaagaagggagtgaatcatgtggta 41889715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 526 - 662
Target Start/End: Original strand, 41901560 - 41901696
Alignment:
Q  526 tggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactattactgaaaggttg 625  Q
    ||||||| |||||||||||| || |||| |||| ||||||| |||| ||| |||||||||||||||||| ||  |||||| || | | |||  ||| |||    
T  41901560 tggaggtgttgaacttgtcatatacaaaagttgatgatgaagcactttatatgatctcaaagagttgttgtggacttttgaaattgtcacttcaagattg 41901659  T
Q  626 tgaaaatgtcacatagaagggactgaaacatgtggta 662  Q
    | |  |||||||| |||||||| |||| |||||||||    
T  41901660 taatgatgtcacaaagaagggagtgaagcatgtggta 41901696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 436 - 605
Target Start/End: Complemental strand, 32267636 - 32267470
Alignment:
Q  436 ttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttttagttacccagttggaggtatt 535  Q
    ||||||||| ||||| ||| ||||| |||||||||||| |    ||||||| |||||| |||   | ||| ||||||  |||| || | |||||||||||    
T  32267636 ttttaaggatatgttgtaacattagacatttgaacttatcccagtgttcaacagtgaaacta---gaaatgaactttgaagttcccaaattggaggtatt 32267540  T
Q  536 gaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttg 605  Q
    |||||||||| |  |||  |||| ||||||| |||| ||| |||||||||||||||||| || |||||||    
T  32267539 gaacttgtcacaaacaatagttgatgatgaagcactttatatgatctcaaagagttgttgtgggcttttg 32267470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 414 - 517
Target Start/End: Complemental strand, 28525197 - 28525094
Alignment:
Q  414 atatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttt 513  Q
    |||||| || |||||||||| |||||||||||||||| ||| || ||| ||||||| ||||     ||||||| | |||||| ||||||||| ||||||     
T  28525197 atatctaaatgtatttgtcaagttttaaggagatgttgtaagatgagggatttgaaattaagcaactgttcaataatgaagccacttggaatcaactttg 28525098  T
Q  514 tagt 517  Q
    ||||    
T  28525097 tagt 28525094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 5e-33; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 405 - 660
Target Start/End: Original strand, 53761676 - 53761928
Alignment:
Q  405 tgcgatagtatatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaa 504  Q
    |||||| | |||||| ||||||||||||| |||||||||||||||| ||| |||||||||||||||||| | |  |||||||||||||||||| ||||||    
T  53761676 tgcgatcgaatatctaaaggtatttgtcaagttttaaggagatgttgtaacattaggcatttgaacttagccgagtgttcaagagtgaagctaattggaa 53761775  T
Q  505 taaactttttagttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgctttt 604  Q
    | |||||| ||||| || || | ||||  ||||||||||||  | | || |||   ||| ||||||||  ||||||||| |||| ||||  || ||||||    
T  53761776 tgaactttgtagttcccaagctagaggcgttgaacttgtcatttacgaaagttaacgataaaacactc--tgtgatctcgaagaattgtcgtgggctttt 53761873  T
Q  605 ggaactattactgaaaggttgtgaaaatgtcacatagaagggactgaaacatgtgg 660  Q
    | || |||||||||||  |||||| ||||||||  | |||||| ||||||||||||    
T  53761874 gcaa-tattactgaaacattgtgataatgtcacggacaagggagtgaaacatgtgg 53761928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 424 - 659
Target Start/End: Complemental strand, 547089 - 546854
Alignment:
Q  424 gtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttttagttaccca 523  Q
    |||||||| |||||||||||||||||| ||| || ||||||||||||||| |    |||| |  |||||| ||| ||||||| ||||||  |||| |  |    
T  547089 gtatttgtgatgttttaaggagatgttgtaagataaggcatttgaacttatccaattgtttagtagtgaacctatttggaatgaactttgaagttcctaa 546990  T
Q  524 gttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactattactgaaaggt 623  Q
     ||||||||  |||||||||||  | |||  ||   ||||||||||||||||||||||||||||||||||| || |||||||||| | |||||| |||      
T  546989 attggaggtggtgaacttgtcacgtacaattgtcaatgatgaaacactctatgtgatctcaaagagttgttgtgggcttttggaattgttactggaagaa 546890  T
Q  624 tgtgaaaatgtcacatagaagggactgaaacatgtg 659  Q
    |||    |||||||| |||||||| |||||||||||    
T  546889 tgttttcatgtcacagagaagggagtgaaacatgtg 546854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 420 - 604
Target Start/End: Original strand, 55908647 - 55908831
Alignment:
Q  420 gaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttttagtta 519  Q
    |||||||||||| | ||| |||||||||||| |||  |||| |||||||| ||| |    |||||||||||||| |||||| |||||||||||  ||||     
T  55908647 gaaggtatttgtgaagttctaaggagatgttgtaaggttagacatttgaatttagcctactgttcaagagtgaaactacttagaataaactttaaagttc 55908746  T
Q  520 cccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgctttt 604  Q
    |  | || ||||| || ||||||||| || ||   |||| |||||||||||||||| |||||||||||| ||||| || ||||||    
T  55908747 ctgaattagaggtgtttaacttgtcacatacatgtgttgatgatgaaacactctatatgatctcaaagaattgttgtgggctttt 55908831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 431 - 610
Target Start/End: Complemental strand, 553648 - 553469
Alignment:
Q  431 tcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttttagttacccagttggag 530  Q
    |||||||||||||| ||||| ||| ||||| ||||||||||||||  | ||||||||||||||| ||| |  | | ||||||  ||||  | |  |||||    
T  553648 tcatgttttaaggacatgttgtaacattagacatttgaacttaacccgctgttcaagagtgaagttacgtacattgaactttaaagttctcaaactggag 553549  T
Q  531 gtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaact 610  Q
    || ||||||||||||  | |||  |||| ||||||| ||||  ||||||| |||||||||||||||| ||||||| ||||    
T  553548 gtgttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaact 553469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 420 - 656
Target Start/End: Original strand, 1548345 - 1548579
Alignment:
Q  420 gaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctactt-ggaataaactttttagtt 518  Q
    |||||||||||| | ||||||||   ||||| ||| ||||| || ||||||||| || |  ||| || ||||||||||||| ||| | ||||||  | ||    
T  1548345 gaaggtatttgtgaagttttaag---atgttgtaagattagacagttgaacttagctcgtagtttaaaagtgaagctactttggactgaactttgaaatt 1548441  T
Q  519 acccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactattactga 618  Q
     || |  ||||||| |||||||||||| || |||   ||| ||||||||||||| ||||||||||||||||||||| || ||||||| |  | ||||  |    
T  1548442 cccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgttgtgggcttttgcacttgttacaaa 1548541  T
Q  619 aaggttgtgaaaatgtcacatagaagggactgaaacat 656  Q
    || ||||| ||||| ||||| |||||||| ||||||||    
T  1548542 aacgttgtaaaaatatcacagagaagggagtgaaacat 1548579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 415 - 662
Target Start/End: Complemental strand, 641100 - 640853
Alignment:
Q  415 tatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaacttttt 514  Q
    |||||||||| |||| ||| |||||||||| ||||| |||| |||| |||||||||||| | || |||    |||| || ||||||||||| || |||      
T  641100 tatctgaaggaatttttcaagttttaaggatatgttgtaatgttagacatttgaacttagccggttgtgatggagtaaacctacttggaatgaaatttga 641001  T
Q  515 agttacccag-ttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactatt 613  Q
    | | ||| |  |||||||| ||||||||||||||| |||| |||| ||||||||||||||| |||| |||||||| |||   ||  |||||| | || ||    
T  641000 act-accaatattggaggtgttgaacttgtcagatacaaacgttgatgatgaaacactctacgtgacctcaaagaattgccgtggtcttttgcatctgtt 640902  T
Q  614 actgaaaggttgtgaaaatgtcacatagaagggactgaaacatgtggta 662  Q
    |||| ||| |||| |  |||| ||| |||||||| |||| |||||||||    
T  640901 actggaagattgtcattatgtaacaaagaagggagtgaatcatgtggta 640853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 21836191 - 21836238
Alignment:
Q  85 ttattcatactgacacatgtagaacactaaaccaatgtgactcacatt 132  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||    
T  21836191 ttattcgtactgactcatgtagaacactaaaccaatgtgactcacatt 21836238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 435 - 617
Target Start/End: Original strand, 3438500 - 3438681
Alignment:
Q  435 gttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttttagttacccagttggaggtat 534  Q
    |||||||||||||||| ||| ||||| |||||||||||| |||| |||| | |||||||  |   || ||| ||||||   ||| |  | ||||||||||    
T  3438500 gttttaaggagatgttgtaagattagacatttgaacttagctggttgtttaggagtgaatttgtgtgcaatgaactttgatgtttcaaaattggaggtat 3438599  T
Q  535 tgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactattactg 617  Q
    ||| ||||||| || |||  |||| |||| ||| |||| |||| |||||||||||||||| || ||||||| |||| ||||||    
T  3438600 tgagcttgtcacatacaagagttgatgat-aaatactccatgtaatctcaaagagttgttgtgggcttttgcaactgttactg 3438681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 534 - 626
Target Start/End: Original strand, 1513440 - 1513532
Alignment:
Q  534 ttgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactattactgaaaggttgt 626  Q
    ||||||||||||  | |||| |||| ||||||||||||||| || ||||||||| |||||  || ||||||| ||||  ||||||||||||||    
T  1513440 ttgaacttgtcatttacaaatgttgatgatgaaacactctacgtaatctcaaagtgttgtcgtgggcttttgcaactcatactgaaaggttgt 1513532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 414 - 546
Target Start/End: Original strand, 21834291 - 21834423
Alignment:
Q  414 atatctgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttt 513  Q
    ||||| |||||||||||  | |||||||||| ||||| ||| |||| ||||||||||||| | || ||||  | ||||||||||| | | || ||||||     
T  21834291 atatcagaaggtatttgcgaagttttaaggaaatgttgtaagattaagcatttgaacttatcaggttgttataaagtgaagctacatagtatcaactttg 21834390  T
Q  514 tagttacccagttggaggtattgaacttgtcag 546  Q
    ||||| || || ||||||| ||| |||||||||    
T  21834391 tagttcccaagctggaggtgttggacttgtcag 21834423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 610
Target Start/End: Original strand, 1524405 - 1524595
Alignment:
Q  420 gaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttttagtta 519  Q
    |||||||||  ||| |||||||||||||||| |||  ||||||||||||||||| |    ||||| | | |  | || | |||||| ||||||  ||||     
T  1524405 gaaggtattcttcaggttttaaggagatgttgtaaacttaggcatttgaacttagccaactgttctaaaatagaacttcatggaatgaactttgaagttc 1524504  T
Q  520 cccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaact 610  Q
    || | |||||||| ||||| ||||||  | |||  |||| |||||||||||||||| |||||||| ||||||||  || ||||||| ||||    
T  1524505 ccaatttggaggtgttgaatttgtcacgtacaagtgttgatgatgaaacactctatatgatctcacagagttgtcgtgggcttttgcaact 1524595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 528 - 630
Target Start/End: Original strand, 8184057 - 8184159
Alignment:
Q  528 gaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactattactgaaaggttgtg 627  Q
    ||||| |||||||||||| || |||  |||| ||||  | |||||||||  |||||||||||||||| || |||||||||||| |||||| ||  |||||    
T  8184057 gaggtgttgaacttgtcacatacaagagttgatgatatagcactctatgcaatctcaaagagttgttgtgggcttttggaactgttactggaaaattgtg 8184156  T
Q  628 aaa 630  Q
    |||    
T  8184157 aaa 8184159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 431 - 500
Target Start/End: Complemental strand, 644999 - 644930
Alignment:
Q  431 tcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctactt 500  Q
    ||||||||||| || ||||| ||| ||||| |||||||| |||||| | ||||||||| |||||||||||    
T  644999 tcatgttttaatgatatgttgtaacattagacatttgaatttaactcgctgttcaagactgaagctactt 644930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 473
Target Start/End: Complemental strand, 1600599 - 1600546
Alignment:
Q  420 gaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaactta 473  Q
    |||||||||||||| ||||||||||||| || ||| ||||| ||||||||||||    
T  1600599 gaaggtatttgtcaagttttaaggagattttctaaaattagacatttgaactta 1600546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 525 - 626
Target Start/End: Complemental strand, 7307935 - 7307834
Alignment:
Q  525 ttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactattactgaaaggtt 624  Q
    ||||||||||||||||||||| || || | |||| ||||||| ||||   | |||||||||||||||||| |  ||||||| | || |||||| ||||||    
T  7307935 ttggaggtattgaacttgtcatatacagaagttgatgatgaagcactacgtatgatctcaaagagttgttgtaggcttttgcacctgttactggaaggtt 7307836  T
Q  625 gt 626  Q
    ||    
T  7307835 gt 7307834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 480 - 593
Target Start/End: Original strand, 55505087 - 55505200
Alignment:
Q  480 tgttcaagagtgaagctacttggaataaactttttagttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtga 579  Q
    ||||||| |||||| ||| ||||||| ||||||  |||  ||||  | ||||| |||||||||||| || |||||||||  |||| |||||| |||||||    
T  55505087 tgttcaacagtgaacctaattggaatgaactttagagtcccccaactagaggtgttgaacttgtcatatacaaaggttgacgatggaacactttatgtga 55505186  T
Q  580 tctcaaagagttgt 593  Q
     |||||||| ||||    
T  55505187 cctcaaagaattgt 55505200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 477
Target Start/End: Complemental strand, 558677 - 558621
Alignment:
Q  421 aaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactg 477  Q
    |||||||||||||||||||||||| ||||| ||| ||||| ||||||| | ||||||    
T  558677 aaggtatttgtcatgttttaaggacatgttctaacattagacatttgaccctaactg 558621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 574 - 661
Target Start/End: Complemental strand, 370946 - 370859
Alignment:
Q  574 atgtgatctcaaagagttgttctgcgcttttggaactattactgaaaggttgtgaaaatgtcacatagaagggactgaaacatgtggt 661  Q
    ||||||||||||||||||||| |  ||||||| ||||||||||| ||  |||||||  | ||||| ||| |||| |||| ||||||||    
T  370946 atgtgatctcaaagagttgttgtcggcttttgcaactattactgcaaaattgtgaaggtatcacaaagatgggagtgaagcatgtggt 370859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 482 - 593
Target Start/End: Complemental strand, 532307 - 532196
Alignment:
Q  482 ttcaagagtgaagctacttggaataaactttttagttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatc 581  Q
    |||||||||||| ||||||||||| ||||||  |||  || || | ||||| |||||||||||| || ||||  ||| ||||||||  || ||||||| |    
T  532307 ttcaagagtgaatctacttggaatgaactttgaagtccccaagctagaggtgttgaacttgtcatatacaaacattgatgatgaaaagctttatgtgacc 532208  T
Q  582 tcaaagagttgt 593  Q
    ||||||| ||||    
T  532207 tcaaagaattgt 532196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 560 - 610
Target Start/End: Complemental strand, 558538 - 558488
Alignment:
Q  560 tgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaact 610  Q
    ||||||| ||||| ||||||||||||||||||||  || ||||||||||||    
T  558538 tgatgaagcactccatgtgatctcaaagagttgtcgtgggcttttggaact 558488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 1489280 - 1489334
Alignment:
Q  420 gaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaa 474  Q
    ||||||||||  |||||||||| || ||||| | |||||||||||||||||||||    
T  1489280 gaaggtattttccatgttttaaagacatgttctgatattaggcatttgaacttaa 1489334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 473
Target Start/End: Original strand, 1533909 - 1533962
Alignment:
Q  420 gaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaactta 473  Q
    ||||||||| ||||||||||||||||||||| ||| || |  ||||||||||||    
T  1533909 gaaggtattagtcatgttttaaggagatgttgtaagatgacacatttgaactta 1533962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 555 - 587
Target Start/End: Complemental strand, 566234 - 566202
Alignment:
Q  555 gttggtgatgaaacactctatgtgatctcaaag 587  Q
    |||| ||||||||||||||||||||||||||||    
T  566234 gttgatgatgaaacactctatgtgatctcaaag 566202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 471
Target Start/End: Original strand, 1519061 - 1519113
Alignment:
Q  419 tgaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaact 471  Q
    ||||||||||||||| |||||||| |||||||  |  ||||||||||||||||    
T  1519061 tgaaggtatttgtcaagttttaagaagatgttgaaggattaggcatttgaact 1519113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 8e-32; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 420 - 662
Target Start/End: Original strand, 45245004 - 45245246
Alignment:
Q  420 gaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttttagtta 519  Q
    ||||| || |||||||||||||||||||||| ||| ||||||||||| ||||||  | | ||||||||| || |  ||| |||||||||||||  ||||     
T  45245004 gaaggaatgtgtcatgttttaaggagatgttgtaacattaggcatttaaacttagtttgctgttcaagactggaattacgtggaataaactttgaagttc 45245103  T
Q  520 cccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactattactgaa 619  Q
    |  |  | ||||| ||||| ||||||||  ||| ||||| ||||||||||||| ||||||||||||||||||||  || ||||||| |||||||| ||||    
T  45245104 caaaacttgaggtgttgaatttgtcagagacaatggttgatgatgaaacactccatgtgatctcaaagagttgtcgtgggcttttgcaactattattgaa 45245203  T
Q  620 aggttgtgaaaatgtcacatagaagggactgaaacatgtggta 662  Q
    |   ||| |  |||||||| | |||||| ||||||||||||||    
T  45245204 aaaatgttatcatgtcacagataagggagtgaaacatgtggta 45245246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 420 - 604
Target Start/End: Original strand, 1037583 - 1037767
Alignment:
Q  420 gaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttttagtta 519  Q
    |||||||||||| | |||||||||||||||| |||  |||| |||||||| ||| |    | |||||||||||| |||||| |||||||||||  ||||     
T  1037583 gaaggtatttgtgaagttttaaggagatgttgtaaggttagacatttgaatttagcctactattcaagagtgaaactacttagaataaactttaaagttc 1037682  T
Q  520 cccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgctttt 604  Q
    |  | || ||||| || ||||||||| || ||   |||| |||||||||||||||| |||||||||||| ||||| || ||||||    
T  1037683 ctgaattagaggtgtttaacttgtcacatacatgtgttgatgatgaaacactctatatgatctcaaagaattgttgtgggctttt 1037767  T

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Target: chr8 (Bit Score: 58; Significance: 5e-24; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 420 - 593
Target Start/End: Original strand, 18315192 - 18315365
Alignment:
Q  420 gaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttttagtta 519  Q
    |||||||||||||| |||||| | || |||| | | ||||| || ||||||||| || |   ||||||| ||||||||| |||||| ||||||  ||||     
T  18315192 gaaggtatttgtcaagttttacgaagttgttctgagattagacagttgaacttagctcgtgattcaagaatgaagctacgtggaatgaactttaaagttc 18315291  T
Q  520 cccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgt 593  Q
    || |  ||||||| |||||||||||| || |||| |||| ||||||| ||||||||||||||||||||||||||    
T  18315292 ccaaactggaggtgttgaacttgtcacatacaaaagttgatgatgaagcactctatgtgatctcaaagagttgt 18315365  T

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Target: chr8; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 421 - 593
Target Start/End: Original strand, 17636317 - 17636493
Alignment:
Q  421 aaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctac----ttggaataaactttttag 516  Q
    ||||||||||||| ||||||||| |||||| ||||||||||||||||||||||    |||||||||||||||| ||||     | |||| ||||||  ||    
T  17636317 aaggtatttgtcaagttttaaggggatgttctaatattaggcatttgaacttaggccgatgttcaagagtgaaactacatcgatcgaatgaactttgaag 17636416  T
Q  517 ttacccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgt 593  Q
    || || | |||||||| |||||||||||| |  ||   ||||  |||||| || | |||||||||||||||||||||    
T  17636417 ttcccaaattggaggtgttgaacttgtcacaaacaggagttgacgatgaagcattgtatgtgatctcaaagagttgt 17636493  T

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Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 525 - 605
Target Start/End: Complemental strand, 27922583 - 27922503
Alignment:
Q  525 ttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttg 605  Q
    |||||||| |||||||||||| || |||| |||| ||||||| |||| ||| |||||||||||||||||| || |||||||    
T  27922583 ttggaggtgttgaacttgtcatatacaaatgttgatgatgaagcactttatatgatctcaaagagttgttgtgggcttttg 27922503  T

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Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 526 - 610
Target Start/End: Complemental strand, 32151375 - 32151291
Alignment:
Q  526 tggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaact 610  Q
    ||||||| || |||||||||  | ||| | ||| ||||||||||||||||||||||||||||||||||  || ||||||| ||||    
T  32151375 tggaggtgttaaacttgtcatgtacaaggtttgatgatgaaacactctatgtgatctcaaagagttgtagtgggcttttgcaact 32151291  T

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Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 498
Target Start/End: Original strand, 28246214 - 28246292
Alignment:
Q  420 gaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctac 498  Q
    |||||||||  ||||||||||| || ||||| ||| ||||| |||||||| |||||| | ||||||||| |||||||||    
T  28246214 gaaggtattgttcatgttttaatgatatgttgtaacattagacatttgaatttaactcgttgttcaagactgaagctac 28246292  T

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Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 8537565 - 8537517
Alignment:
Q  35 ttgcaagattatttcaatttttcttttcttatatatgatttttgaaaag 83  Q
    |||||||||  ||||||||||||||||| ||||| ||||||| ||||||    
T  8537565 ttgcaagatcgtttcaatttttcttttcctatatgtgattttcgaaaag 8537517  T

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Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 528 - 616
Target Start/End: Original strand, 34936190 - 34936278
Alignment:
Q  528 gaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaactattact 616  Q
    ||||| ||| |||||||| || |||  |||| |||| ||||||||||||  ||| |||||||||||  || ||||||| ||||||||||    
T  34936190 gaggtgttggacttgtcatatacaagagttgatgataaaacactctatgccatcgcaaagagttgtcgtgggcttttgcaactattact 34936278  T

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Target: scaffold0807 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 425 - 611
Target Start/End: Original strand, 1388 - 1577
Alignment:
Q  425 tatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttttagttacccag 524  Q
    ||||||||| |||||||||||||||| ||| ||||| |||||||||||| |  | ||||||   ||| | ||| ||| ||| |||||| ||||| |  ||    
T  1388 tatttgtcaagttttaaggagatgttataagattagacatttgaacttagcctggtgttcatctgtggacctatttgaaatgaactttgtagttcctaag 1487  T
Q  525 ttggaggtattgaacttgtcagatgcaaaggttggtgat---gaaacactctatgtgatctcaaagagttgttctgcgcttttggaacta 611  Q
     | ||||| ||| |||||||| || |||| |||| ||||   ||||||||||||||||||||||||| |||||| | | |||||||||||    
T  1488 ctagaggtgttggacttgtcaaatacaaatgttgatgatgatgaaacactctatgtgatctcaaagaattgttcagggattttggaacta 1577  T

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Target: scaffold0295 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 420 - 594
Target Start/End: Original strand, 543 - 717
Alignment:
Q  420 gaaggtatttgtcatgttttaaggagatgttttaatattaggcatttgaacttaactggatgttcaagagtgaagctacttggaataaactttttagtta 519  Q
    |||||||||||| | ||| |||||||||||| |||   ||| |||||||| ||| |    |||||||||||||| |||||| |||||||||||  ||||     
T  543 gaaggtatttgtgaagttctaaggagatgttgtaaggctagacatttgaatttagcctactgttcaagagtgaaactacttagaataaactttaaagttc 642  T
Q  520 cccagttggaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgtt 594  Q
    |  | || ||||| || ||||||||| || |||  || | |||||||||||||||| ||||||| |||| |||||    
T  643 ctgaattagaggtgtttaacttgtcacatacaagtgtcgatgatgaaacactctatatgatctcgaagaattgtt 717  T

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Target: scaffold0041 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 528 - 593
Target Start/End: Complemental strand, 39256 - 39191
Alignment:
Q  528 gaggtattgaacttgtcagatgcaaaggttggtgatgaaacactctatgtgatctcaaagagttgt 593  Q
    ||||| ||||||||| ||  | ||||||||  |||||||||||| |||||||||||||||||||||    
T  39256 gaggtgttgaacttgacatttacaaaggttaatgatgaaacactttatgtgatctcaaagagttgt 39191  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 477
Target Start/End: Complemental strand, 88980 - 88939
Alignment:
Q  436 ttttaaggagatgttttaatattaggcatttgaacttaactg 477  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||    
T  88980 ttttaaggagatgttgtaagattagacatttgaacttaactg 88939  T

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