View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0598_high_34 (Length: 343)
Name: NF0598_high_34
Description: NF0598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0598_high_34 |
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Alignment Details
Target: chr8 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 11 - 276
Target Start/End: Original strand, 5410473 - 5410738
Alignment:
| Q |
11 |
caaagggataggttcaaagtacaactttgtagaagaacgaatcagagtaaacggggaatcaagaatctgatacagttagattcatgattgaaatgggata |
110 |
Q |
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| T |
5410473 |
caaagggataggttcaaagtacaactttgtagaagaacgaatcagagtaaacggggaatcaagaatctgatacagttagattcatgattgaaatgggata |
5410572 |
T |
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| Q |
111 |
attatttactactaaagtttcccatttcaatcatccttacctaaagtatgaataaatgcactactatatacagttagattcatgattgaaatgggactat |
210 |
Q |
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| T |
5410573 |
attatttactactaaagtttcccatttcaatcatccttacctaaagtatgaataaatgcactactatatacagttagattcatgattgaaatgggactat |
5410672 |
T |
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| Q |
211 |
cagcaacttgtcccatgattatcaatatcattgattaatgggacccttgaactcaaactactatat |
276 |
Q |
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| T |
5410673 |
cagcaacttgtcccatgattatcaatatcattgattaatgggacccttgaactcaaactactatat |
5410738 |
T |
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