View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0598_low_26 (Length: 406)
Name: NF0598_low_26
Description: NF0598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0598_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 87 - 396
Target Start/End: Complemental strand, 43193064 - 43192755
Alignment:
| Q |
87 |
aactccactctcaaaatccacaaacccttcctccgacacaatagcgttcttaatcgccgataaatcaatccgaatcttcgctctcggcgtccacttctct |
186 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43193064 |
aactccactctcaaaatccacaaacccttcctccgacacaatagcgttcttaatcgccgataaatcaatccgaatcttcgctctcggcgtccacttctcc |
43192965 |
T |
|
| Q |
187 |
aaaaccttcttactaaaatccggcgaagaataagcgcgtcgaatctccgacaatttcggctgtaacttcttcacgaattctatctccgccgccggcggag |
286 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
43192964 |
aaaaccttcttactaaaatccggcgaagaataagcgcgtcgaatctccgacaatttcggctgtaatttcttcacgaattctatctccgccgccggcggag |
43192865 |
T |
|
| Q |
287 |
acctcatcgccggaacagaaaacgccggtgcggcagaattgaagaaattctcgagttcacggtcgaaggagtttgctaggtttttgaaagagtttgctct |
386 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43192864 |
acctcatcgccggaacagaaaacgccggtgcggcagaattgaagaaattctcgagttcacggtcgaaggagtttgctaggtttttgaaagagtttgctct |
43192765 |
T |
|
| Q |
387 |
atctttcatc |
396 |
Q |
| |
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|||||||||| |
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| T |
43192764 |
atctttcatc |
43192755 |
T |
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