View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0598_low_37 (Length: 362)
Name: NF0598_low_37
Description: NF0598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0598_low_37 |
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Alignment Details
Target: chr4 (Bit Score: 243; Significance: 1e-134; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 15 - 266
Target Start/End: Complemental strand, 1413086 - 1412833
Alignment:
| Q |
15 |
agatcttgtgactgcatgaatgttcatcgtcagcgacttcagcaaacgtgggttctatttcttagcattatccgcttaattgtatggtac--cccagtgt |
112 |
Q |
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| T |
1413086 |
agatcttgtgactgcatgaatgttcatcgtcagcgacttcagcaaacgtgggttctatttcttagcattatccgcttaattgtatggtacaccccagtgt |
1412987 |
T |
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| Q |
113 |
tctatttaattttcttcttccctggtcgattaatcataccaaacatttctagtcaaatctcaatttttaagcaatgatcacagattctatatccaaagta |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1412986 |
tctatttaattttcttcttccctggtcgattaatcataccaaacatttctagtcaaatctcaatttttaagcaatgatcacagattctatatccaaagta |
1412887 |
T |
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| Q |
213 |
aaggctagagtataaaatgaagtaggttaccaacgtttaatgtaaatgacttat |
266 |
Q |
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| T |
1412886 |
aaggctagagtataaaatgaagtaggttaccaacgtttaatgtaaatgacttat |
1412833 |
T |
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