View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0598_low_52 (Length: 323)
Name: NF0598_low_52
Description: NF0598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0598_low_52 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 38441725 - 38441784
Alignment:
| Q |
30 |
agtttatggggttaaagatcaaggat--ctatgagttgatgatagaaatatcattacaaa |
87 |
Q |
| |
|
|||||||| | |||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
38441725 |
agtttatgagcttaaagatcaagaatatctatgagttgatgatagaaatatcattacaaa |
38441784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 330 times since January 2019
Visitors: 3833