View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0599_high_53 (Length: 271)

Name: NF0599_high_53
Description: NF0599
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0599_high_53
NF0599_high_53
[»] chr2 (45 HSPs)
chr2 (16-203)||(30852560-30852747)
chr2 (81-204)||(12170408-12170530)
chr2 (145-203)||(13344556-13344614)
chr2 (145-203)||(41492896-41492954)
chr2 (145-206)||(12337934-12337995)
chr2 (145-213)||(13197700-13197768)
chr2 (104-208)||(15372221-15372325)
chr2 (145-205)||(15896914-15896974)
chr2 (109-193)||(36688892-36688976)
chr2 (104-203)||(3055558-3055657)
chr2 (145-208)||(6648514-6648577)
chr2 (104-203)||(13197741-13197840)
chr2 (104-203)||(15896842-15896941)
chr2 (104-203)||(37990044-37990143)
chr2 (104-203)||(38917553-38917652)
chr2 (104-203)||(41478670-41478769)
chr2 (104-203)||(44397547-44397646)
chr2 (104-203)||(44398686-44398785)
chr2 (145-200)||(44804581-44804636)
chr2 (145-203)||(3055630-3055688)
chr2 (145-203)||(9047755-9047813)
chr2 (145-203)||(37990013-37990071)
chr2 (145-203)||(38917522-38917580)
chr2 (145-203)||(41478639-41478697)
chr2 (145-203)||(44398758-44398816)
chr2 (111-188)||(15243990-15244067)
chr2 (147-204)||(15372300-15372357)
chr2 (171-203)||(13775828-13775860)
chr2 (171-203)||(42263469-42263501)
chr2 (112-203)||(4683971-4684062)
chr2 (104-203)||(13344484-13344583)
chr2 (145-208)||(16243778-16243841)
chr2 (145-203)||(16044317-16044375)
chr2 (109-167)||(36089479-36089537)
chr2 (145-203)||(37666610-37666668)
chr2 (145-203)||(44397619-44397677)
chr2 (104-205)||(6648550-6648651)
chr2 (104-197)||(9047786-9047879)
chr2 (104-205)||(16044348-16044449)
chr2 (104-197)||(16243814-16243907)
chr2 (111-184)||(16734802-16734875)
chr2 (146-203)||(30099182-30099239)
chr2 (171-203)||(7765793-7765825)
chr2 (171-203)||(20360561-20360593)
chr2 (171-203)||(32750341-32750373)
[»] chr1 (49 HSPs)
chr1 (103-203)||(16448138-16448238)
chr1 (98-203)||(11897054-11897159)
chr1 (98-203)||(37552141-37552246)
chr1 (145-205)||(26471063-26471123)
chr1 (104-203)||(12483659-12483758)
chr1 (104-203)||(26471096-26471195)
chr1 (104-207)||(47216730-47216833)
chr1 (98-203)||(17556752-17556858)
chr1 (145-203)||(17556825-17556883)
chr1 (145-207)||(39401962-39402024)
chr1 (65-197)||(14984843-14984974)
chr1 (145-205)||(31842793-31842853)
chr1 (145-205)||(47777479-47777539)
chr1 (104-203)||(47969694-47969794)
chr1 (104-203)||(9981647-9981746)
chr1 (145-204)||(11796005-11796064)
chr1 (148-203)||(11897129-11897184)
chr1 (108-195)||(12062568-12062654)
chr1 (104-203)||(25694319-25694418)
chr1 (104-203)||(27159389-27159488)
chr1 (111-162)||(30800466-30800517)
chr1 (104-203)||(31842826-31842925)
chr1 (104-203)||(39401997-39402096)
chr1 (104-203)||(44668124-44668223)
chr1 (104-195)||(47777512-47777603)
chr1 (145-203)||(14984909-14984967)
chr1 (145-203)||(25694391-25694449)
chr1 (145-203)||(27159358-27159416)
chr1 (145-203)||(44668093-44668151)
chr1 (145-197)||(44955212-44955264)
chr1 (109-205)||(44955242-44955338)
chr1 (67-203)||(47588332-47588467)
chr1 (145-200)||(9981719-9981774)
chr1 (104-203)||(11795933-11796032)
chr1 (104-203)||(23278032-23278131)
chr1 (104-203)||(34042696-34042795)
chr1 (145-208)||(47969767-47969830)
chr1 (145-203)||(1050960-1051018)
chr1 (170-208)||(9301913-9301951)
chr1 (107-193)||(12062594-12062679)
chr1 (149-203)||(12483628-12483682)
chr1 (145-203)||(34042768-34042826)
chr1 (145-203)||(47216699-47216757)
chr1 (104-205)||(1050886-1050987)
chr1 (149-206)||(11989857-11989914)
chr1 (98-203)||(12213499-12213604)
chr1 (171-203)||(2961103-2961135)
chr1 (171-203)||(26924212-26924244)
chr1 (171-203)||(28359070-28359102)
[»] chr4 (44 HSPs)
chr4 (98-203)||(17344213-17344318)
chr4 (104-205)||(6121924-6122025)
chr4 (98-203)||(40913214-40913319)
chr4 (145-204)||(42797804-42797863)
chr4 (145-203)||(53337442-53337500)
chr4 (71-204)||(24704369-24704501)
chr4 (147-208)||(51894577-51894638)
chr4 (111-203)||(43900549-43900641)
chr4 (104-208)||(47833606-47833710)
chr4 (71-207)||(52756671-52756806)
chr4 (104-203)||(3372121-3372220)
chr4 (145-208)||(3422132-3422195)
chr4 (104-203)||(7579310-7579409)
chr4 (104-203)||(20538717-20538816)
chr4 (145-204)||(43900621-43900680)
chr4 (145-208)||(47838612-47838675)
chr4 (104-203)||(48336263-48336362)
chr4 (145-203)||(6121893-6121951)
chr4 (148-202)||(40913190-40913244)
chr4 (149-203)||(41615676-41615730)
chr4 (145-203)||(47833683-47833741)
chr4 (145-206)||(20538683-20538744)
chr4 (146-203)||(41469766-41469823)
chr4 (98-191)||(41615701-41615794)
chr4 (147-203)||(4780369-4780425)
chr4 (95-167)||(17471943-17472015)
chr4 (104-188)||(50430449-50430533)
chr4 (104-204)||(53337369-53337469)
chr4 (104-203)||(3904714-3904813)
chr4 (104-203)||(3992976-3993075)
chr4 (112-203)||(33551201-33551292)
chr4 (145-208)||(48336335-48336398)
chr4 (104-203)||(51894613-51894712)
chr4 (145-203)||(3372193-3372251)
chr4 (145-203)||(3993048-3993106)
chr4 (177-207)||(29845743-29845773)
chr4 (145-203)||(33621868-33621926)
chr4 (109-203)||(42797732-42797826)
chr4 (145-203)||(46797797-46797855)
chr4 (94-203)||(25855083-25855192)
chr4 (147-203)||(1716301-1716357)
chr4 (171-203)||(2385194-2385226)
chr4 (175-203)||(3904683-3904711)
chr4 (171-203)||(6246725-6246757)
[»] chr7 (43 HSPs)
chr7 (145-203)||(28536751-28536809)
chr7 (104-203)||(22285699-22285798)
chr7 (104-207)||(31319430-31319533)
chr7 (104-203)||(36016227-36016326)
chr7 (67-208)||(1738442-1738582)
chr7 (98-203)||(7269430-7269535)
chr7 (145-205)||(9575481-9575541)
chr7 (145-205)||(46840932-46840992)
chr7 (104-203)||(1565760-1565859)
chr7 (104-203)||(7240749-7240848)
chr7 (145-208)||(7240821-7240884)
chr7 (145-208)||(7482297-7482360)
chr7 (72-203)||(9575409-9575539)
chr7 (104-203)||(38063944-38064043)
chr7 (104-203)||(46840860-46840959)
chr7 (145-203)||(1738447-1738505)
chr7 (145-203)||(4790320-4790378)
chr7 (145-203)||(9268828-9268886)
chr7 (69-203)||(36583395-36583528)
chr7 (147-196)||(7269412-7269461)
chr7 (146-203)||(22285772-22285829)
chr7 (171-203)||(5347722-5347754)
chr7 (145-205)||(23314137-23314197)
chr7 (104-203)||(7482225-7482324)
chr7 (104-203)||(9268756-9268855)
chr7 (171-206)||(10007693-10007728)
chr7 (70-141)||(21393147-21393217)
chr7 (104-203)||(23314170-23314269)
chr7 (104-203)||(28536782-28536881)
chr7 (170-205)||(32811493-32811528)
chr7 (145-203)||(94318-94376)
chr7 (174-208)||(7463570-7463604)
chr7 (145-203)||(31319399-31319457)
chr7 (145-203)||(36583467-36583525)
chr7 (145-203)||(38063913-38063971)
chr7 (145-203)||(38441532-38441590)
chr7 (104-197)||(94349-94442)
chr7 (150-203)||(7661076-7661129)
chr7 (170-203)||(12426529-12426562)
chr7 (146-207)||(36016192-36016253)
chr7 (171-203)||(2523887-2523919)
chr7 (171-203)||(20397932-20397964)
chr7 (171-203)||(34281668-34281700)
[»] chr8 (51 HSPs)
chr8 (125-198)||(28463616-28463689)
chr8 (104-205)||(39571234-39571335)
chr8 (95-203)||(24692001-24692108)
chr8 (95-203)||(31654613-31654721)
chr8 (104-207)||(6552651-6552754)
chr8 (104-203)||(7012171-7012270)
chr8 (149-208)||(8587165-8587224)
chr8 (109-200)||(17006914-17007005)
chr8 (109-200)||(17570242-17570333)
chr8 (104-203)||(32114506-32114605)
chr8 (109-208)||(33057589-33057688)
chr8 (145-203)||(44498187-44498245)
chr8 (104-208)||(54643-54747)
chr8 (104-203)||(2890193-2890292)
chr8 (104-203)||(3304309-3304408)
chr8 (104-203)||(7785809-7785908)
chr8 (109-204)||(12343176-12343271)
chr8 (104-203)||(32211394-32211493)
chr8 (104-203)||(33289292-33289391)
chr8 (145-203)||(54612-54670)
chr8 (145-203)||(2890162-2890220)
chr8 (145-203)||(6552727-6552785)
chr8 (145-203)||(7012243-7012301)
chr8 (145-203)||(7785778-7785836)
chr8 (145-203)||(33289261-33289319)
chr8 (145-203)||(39571203-39571261)
chr8 (145-203)||(43199354-43199412)
chr8 (109-203)||(43199390-43199484)
chr8 (104-203)||(7805730-7805829)
chr8 (104-203)||(12763685-12763784)
chr8 (104-203)||(15888383-15888482)
chr8 (104-203)||(25601031-25601130)
chr8 (104-203)||(44498218-44498317)
chr8 (145-203)||(3304278-3304336)
chr8 (145-203)||(7805699-7805757)
chr8 (145-203)||(8587242-8587300)
chr8 (145-203)||(12763654-12763712)
chr8 (145-203)||(25601000-25601058)
chr8 (145-203)||(32211363-32211421)
chr8 (174-208)||(34157781-34157815)
chr8 (81-162)||(13246803-13246883)
chr8 (174-207)||(45145985-45146018)
chr8 (171-203)||(2339407-2339439)
chr8 (145-197)||(12343146-12343198)
chr8 (147-195)||(15688038-15688086)
chr8 (171-203)||(22781999-22782031)
chr8 (171-203)||(27793314-27793346)
chr8 (138-206)||(28999113-28999181)
chr8 (145-205)||(31654685-31654745)
chr8 (147-203)||(33057668-33057724)
chr8 (171-203)||(34028500-34028532)
[»] chr5 (41 HSPs)
chr5 (110-203)||(20848074-20848167)
chr5 (98-194)||(966157-966253)
chr5 (104-208)||(9395345-9395449)
chr5 (69-203)||(13033051-13033184)
chr5 (145-203)||(37642026-37642084)
chr5 (87-184)||(14325879-14325975)
chr5 (146-203)||(21576019-21576076)
chr5 (149-197)||(3549553-3549601)
chr5 (107-203)||(4443960-4444056)
chr5 (104-208)||(37148986-37149090)
chr5 (145-208)||(9395422-9395485)
chr5 (104-203)||(13103024-13103123)
chr5 (146-200)||(4444033-4444087)
chr5 (145-203)||(6126896-6126954)
chr5 (146-208)||(13103097-13103159)
chr5 (145-203)||(17025696-17025754)
chr5 (145-203)||(26350350-26350408)
chr5 (87-189)||(35584388-35584489)
chr5 (145-203)||(36563538-36563596)
chr5 (145-203)||(41989407-41989465)
chr5 (95-208)||(582984-583097)
chr5 (70-203)||(26350348-26350480)
chr5 (109-154)||(36595810-36595855)
chr5 (145-206)||(37148952-37149013)
chr5 (104-204)||(11795167-11795267)
chr5 (104-203)||(17025624-17025723)
chr5 (104-203)||(23359942-23360041)
chr5 (145-204)||(23360014-23360073)
chr5 (170-205)||(29031152-29031187)
chr5 (104-203)||(36563569-36563668)
chr5 (104-203)||(41989438-41989537)
chr5 (145-203)||(11795240-11795298)
chr5 (146-208)||(13033124-13033186)
chr5 (175-205)||(20848175-20848205)
chr5 (175-205)||(38361711-38361741)
chr5 (159-208)||(37641948-37641997)
chr5 (171-203)||(903965-903997)
chr5 (171-203)||(1643461-1643493)
chr5 (171-203)||(26898308-26898340)
chr5 (171-203)||(31802957-31802989)
chr5 (147-195)||(36595782-36595830)
[»] chr3 (56 HSPs)
chr3 (70-203)||(17653712-17653844)
chr3 (71-203)||(37508921-37509052)
chr3 (104-203)||(36095711-36095810)
chr3 (109-208)||(38964387-38964486)
chr3 (109-203)||(8437425-8437519)
chr3 (109-203)||(21295362-21295456)
chr3 (81-203)||(26019489-26019609)
chr3 (81-203)||(33942941-33943062)
chr3 (109-203)||(46208030-46208124)
chr3 (146-203)||(21295326-21295383)
chr3 (104-197)||(40691027-40691120)
chr3 (146-203)||(46208103-46208160)
chr3 (145-205)||(48340469-48340529)
chr3 (109-208)||(4238589-4238688)
chr3 (148-203)||(9027142-9027197)
chr3 (104-203)||(10297979-10298078)
chr3 (104-203)||(19557083-19557182)
chr3 (104-203)||(22721931-22722030)
chr3 (104-203)||(34080061-34080160)
chr3 (104-203)||(42507386-42507485)
chr3 (104-203)||(44785427-44785526)
chr3 (104-203)||(49823412-49823511)
chr3 (104-203)||(51406673-51406772)
chr3 (145-203)||(10298051-10298109)
chr3 (145-203)||(19557052-19557110)
chr3 (145-203)||(38964464-38964522)
chr3 (145-203)||(40690996-40691054)
chr3 (145-203)||(49823381-49823439)
chr3 (175-208)||(6013331-6013364)
chr3 (72-205)||(35513471-35513603)
chr3 (145-206)||(42507352-42507413)
chr3 (109-205)||(8092586-8092682)
chr3 (147-203)||(34080030-34080086)
chr3 (145-208)||(8817381-8817444)
chr3 (104-203)||(8817417-8817516)
chr3 (145-200)||(9111497-9111552)
chr3 (104-203)||(42170377-42170476)
chr3 (104-203)||(48340397-48340496)
chr3 (145-203)||(2787832-2787890)
chr3 (145-203)||(4238666-4238724)
chr3 (145-203)||(8437497-8437555)
chr3 (145-203)||(17653784-17653842)
chr3 (174-208)||(21653338-21653372)
chr3 (145-203)||(22722003-22722061)
chr3 (145-203)||(37508993-37509051)
chr3 (145-203)||(51406745-51406803)
chr3 (104-197)||(2787863-2787956)
chr3 (138-203)||(42299630-42299695)
chr3 (171-203)||(379190-379222)
chr3 (171-203)||(21662885-21662917)
chr3 (171-203)||(25113348-25113380)
chr3 (171-203)||(40214899-40214931)
chr3 (171-203)||(40464639-40464671)
chr3 (171-203)||(51516957-51516989)
chr3 (171-203)||(51698113-51698145)
chr3 (171-203)||(53442024-53442056)
[»] scaffold0011 (1 HSPs)
scaffold0011 (132-203)||(231362-231433)
[»] chr6 (31 HSPs)
chr6 (104-206)||(26602320-26602422)
chr6 (104-203)||(2830335-2830434)
chr6 (104-203)||(6330115-6330214)
chr6 (104-203)||(8383000-8383099)
chr6 (104-203)||(11572176-11572275)
chr6 (104-203)||(35031032-35031131)
chr6 (145-203)||(2830407-2830465)
chr6 (145-203)||(6330187-6330245)
chr6 (145-203)||(8099602-8099660)
chr6 (145-203)||(8382969-8383027)
chr6 (145-203)||(9644768-9644826)
chr6 (145-203)||(9650785-9650843)
chr6 (145-203)||(11572145-11572203)
chr6 (145-203)||(13853593-13853651)
chr6 (145-203)||(26602395-26602453)
chr6 (145-203)||(33052794-33052852)
chr6 (104-213)||(9644686-9644795)
chr6 (104-213)||(9650703-9650812)
chr6 (147-203)||(8186441-8186497)
chr6 (104-208)||(13853624-13853728)
chr6 (104-203)||(8099530-8099629)
chr6 (145-204)||(8417792-8417851)
chr6 (104-187)||(28747165-28747248)
chr6 (104-203)||(33052825-33052924)
chr6 (149-203)||(3788113-3788167)
chr6 (109-203)||(6068566-6068660)
chr6 (145-203)||(6068638-6068696)
chr6 (104-213)||(8417824-8417933)
chr6 (170-203)||(33859606-33859639)
chr6 (171-203)||(6045680-6045712)
chr6 (175-203)||(22896471-22896499)
[»] scaffold0464 (2 HSPs)
scaffold0464 (104-203)||(6162-6261)
scaffold0464 (145-208)||(6126-6189)
[»] scaffold0204 (2 HSPs)
scaffold0204 (104-203)||(23785-23884)
scaffold0204 (145-208)||(23857-23920)
[»] scaffold1707 (1 HSPs)
scaffold1707 (104-196)||(1342-1434)
[»] scaffold0007 (1 HSPs)
scaffold0007 (171-203)||(77344-77376)
[»] scaffold0002 (1 HSPs)
scaffold0002 (171-203)||(492304-492336)
[»] scaffold0482 (2 HSPs)
scaffold0482 (104-203)||(12860-12959)
scaffold0482 (145-203)||(12932-12990)
[»] scaffold0009 (2 HSPs)
scaffold0009 (104-203)||(49505-49604)
scaffold0009 (149-204)||(49581-49636)
[»] scaffold0415 (1 HSPs)
scaffold0415 (177-207)||(13727-13757)
[»] scaffold0221 (1 HSPs)
scaffold0221 (171-203)||(11147-11179)


Alignment Details
Target: chr2 (Bit Score: 164; Significance: 1e-87; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 16 - 203
Target Start/End: Original strand, 30852560 - 30852747
Alignment:
Q  16 atcccgatgattaataaaaatattataaatcacactaatcaaaatcgaatgattaatactaccttcgatcatatttataaaaagaaaattggatcaacaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||    
T  30852560 atcccgatgattaataaaaatattataaatcacactaatcaaaatcgaatgattaatactaccttcgatcatacttataaaaagaaaattgggacaacaa 30852659  T
Q  116 aaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    || |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30852660 aagtttatgtatctgattcaatattcagtctagatacataaacttttattaatctaactttctcttataaataggaccggagggagta 30852747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 204
Target Start/End: Original strand, 12170408 - 12170530
Alignment:
Q  81 cgatcatatttataaaaagaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctct 180  Q
    ||||| ||||||||| | |||| |||| ||||||||| || |||||| |  || || |||||||| | |||||| |||||||||| | |||| |||||||    
T  12170408 cgatcttatttataaga-gaaacttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattaacttttattgacctaattttctct 12170506  T
Q  181 tataaataggaccggagggagtaa 204  Q
    | ||||||||| ||||||||||||    
T  12170507 tgtaaataggatcggagggagtaa 12170530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 13344556 - 13344614
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || ||| ||  |||||||||||||||||||||||||||||    
T  13344556 ctagatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagta 13344614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 41492954 - 41492896
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | || ||||||||||||||||||||||||||||||    
T  41492954 ctagatacatcaacttttgttgacccaaatttctcttataaataggaccggagggagta 41492896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 12337995 - 12337934
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaata 206  Q
    |||||||||||||||||| || | | ||  ||||||||||||||||||||||||||||||||    
T  12337995 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaata 12337934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 213
Target Start/End: Complemental strand, 13197768 - 13197700
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaatattcttta 213  Q
    |||||||||||||||||| || | | ||  ||||||||||||||||||||||||||||| |||| ||||    
T  13197768 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtagtatttttta 13197700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 208
Target Start/End: Complemental strand, 15372325 - 15372221
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||| ||||||||||    
T  15372325 ttgggtcaacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggactggagggagta 15372226  T
Q  204 atatt 208  Q
     ||||    
T  15372225 ttatt 15372221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 15896914 - 15896974
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaat 205  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||||    
T  15896914 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 15896974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 36688976 - 36688892
Alignment:
Q  109 tcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggacc 193  Q
    |||||||||||| ||||||||  || || |||||| | |||||||||||| ||| || | | |||||||||||||||||||||||    
T  36688976 tcaacaaaaattgatgtatcttgtttaaaattcagacaagatacatcaacgtttgttgaccaaactttctcttataaataggacc 36688892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 3055657 - 3055558
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  3055657 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3055558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 6648577 - 6648514
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaatatt 208  Q
    |||||||||||||||||| || | | ||  ||||||||||||||||||||||||||||| ||||    
T  6648577 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattatt 6648514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 13197741 - 13197840
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  13197741 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 15896941 - 15896842
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  15896941 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 15896842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 37990044 - 37990143
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  37990044 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37990143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 38917553 - 38917652
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  ||||||||| | |||| ||| ||||||||||||||||||||| ||||    
T  38917553 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggaccggaggtagta 38917652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 41478670 - 41478769
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  41478670 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 41478769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 44397646 - 44397547
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  44397646 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44397547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 44398785 - 44398686
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  44398785 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44398686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 44804636 - 44804581
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggaggga 200  Q
    |||||||||||||||||| ||||  |||  ||||||||||||||||||||||||||    
T  44804636 ctagatacatcaacttttgttaacttaaaattctcttataaataggaccggaggga 44804581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 3055630 - 3055688
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  3055630 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 3055688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 9047813 - 9047755
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  9047813 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9047755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 37990071 - 37990013
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  37990071 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 37990013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 38917580 - 38917522
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  38917580 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 38917522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 41478697 - 41478639
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  41478697 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 41478639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 44398758 - 44398816
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  44398758 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 44398816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 188
Target Start/End: Complemental strand, 15244067 - 15243990
Alignment:
Q  111 aacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaata 188  Q
    ||||||| || ||||||||||||||| ||| || |||||||||||||||||| || ||  || | |||||||||||||    
T  15244067 aacaaaagttaatgtatctgattcaaaatttagactagatacatcaacttttgttgattcaaatatctcttataaata 15243990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 15372300 - 15372357
Alignment:
Q  147 agatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaa 204  Q
    |||||||||||||||| || | | ||  ||||||||||||||||||||||||||||||    
T  15372300 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaa 15372357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 13775828 - 13775860
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||||||||||||||||||    
T  13775828 aactttctcttataaataggaccggagggagta 13775860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 42263501 - 42263469
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||||||||||||||||||    
T  42263501 aactttctcttataaataggaccggagggagta 42263469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 203
Target Start/End: Original strand, 4683971 - 4684062
Alignment:
Q  112 acaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  4683971 acaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 4684062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 13344583 - 13344484
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||| || ||||||||  || || |||||||| | ||||||  | |||| || | |||| |||||||||||||||| |||||||| ||||    
T  13344583 ttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagta 13344484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 16243841 - 16243778
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaatatt 208  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||| |||||| ||||    
T  16243841 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggatggagtattatt 16243778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 16044375 - 16044317
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||  || | | ||  |||||||||||||||||||||||||||||    
T  16044375 ctagatacatcaactttagttgacccaaaattctcttataaataggaccggagggagta 16044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 167
Target Start/End: Original strand, 36089479 - 36089537
Alignment:
Q  109 tcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaa 167  Q
    ||||||||| || | ||||||||||||| ||| |  |||||||||||||||||||||||    
T  36089479 tcaacaaaagttaacgtatctgattcaaaatttaaactagatacatcaacttttattaa 36089537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 37666668 - 37666610
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||  || | | ||  |||||||||||||||||||||||||||||    
T  37666668 ctagatacatcaactttagttgacccaaaattctcttataaataggaccggagggagta 37666610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 44397619 - 44397677
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  ||||||||||||||||||||| |||||||    
T  44397619 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggggggagta 44397677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 205
Target Start/End: Original strand, 6648550 - 6648651
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  | || | || | |||| ||||||||||||||||||||||||| ||||    
T  6648550 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 6648649  T
Q  204 at 205  Q
    ||    
T  6648650 at 6648651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 197
Target Start/End: Original strand, 9047786 - 9047879
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggag 197  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||| ||||||||    
T  9047786 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactttttttgacctaaatttctcttataaatatgaccggag 9047879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 205
Target Start/End: Original strand, 16044348 - 16044449
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||| ||| || ||||||||  || || |||||||  | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  16044348 ttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 16044447  T
Q  204 at 205  Q
    ||    
T  16044448 at 16044449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 197
Target Start/End: Original strand, 16243814 - 16243907
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggag 197  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||| ||||||||||||||||||||    
T  16243814 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggag 16243907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 16734875 - 16734802
Alignment:
Q  111 aacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttata 184  Q
    ||||||| || |||||| || || || |||||||| |||||||||||||||| || | | ||||||||||||||    
T  16734875 aacaaaagttgatgtatttggttaaaaattcagtccagatacatcaacttttgttgaccaaactttctcttata 16734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 30099239 - 30099182
Alignment:
Q  146 tagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||||||| || | | ||  |||||| ||||||||||||||||||||||    
T  30099239 tagatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagta 30099182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 7765825 - 7765793
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    ||||||||||| |||||||||||||||||||||    
T  7765825 aactttctcttgtaaataggaccggagggagta 7765793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 20360561 - 20360593
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||||||||| |||||||||||||    
T  20360561 aactttctcttataaatagaaccggagggagta 20360593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 32750373 - 32750341
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    ||||||||||| |||||||||||||||||||||    
T  32750373 aactttctcttgtaaataggaccggagggagta 32750341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 103 - 203
Target Start/End: Original strand, 16448138 - 16448238
Alignment:
Q  103 attggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagt 202  Q
    ||||| ||||||||| |||||||||||| ||||| |||||||| |||||||||||||||| || | | ||||||||||||||||||||||||||||||||    
T  16448138 attgggtcaacaaaagtttatgtatctggttcaaaattcagtccagatacatcaacttttgttgacccaactttctcttataaataggaccggagggagt 16448237  T
Q  203 a 203  Q
    |    
T  16448238 a 16448238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 11897159 - 11897054
Alignment:
Q  98 agaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggag 197  Q
    ||||| |||| ||||||||| || ||||||| | || || |||||||  |||||||||||||||| || | |||||||||||||||||||||||||||||    
T  11897159 agaaatttgggtcaacaaaagttgatgtatccggttaaaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataggaccggag 11897060  T
Q  198 ggagta 203  Q
    ||||||    
T  11897059 ggagta 11897054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 37552246 - 37552141
Alignment:
Q  98 agaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggag 197  Q
    ||||| |||| |||||||||||  ||||||||| || || |||||||| |||||||| |||| || || |   |||||| ||||||||||||||||||||    
T  37552246 agaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccagatacatgaactgttgttgactcaactttatcttataaataggaccggag 37552147  T
Q  198 ggagta 203  Q
    ||||||    
T  37552146 ggagta 37552141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 26471123 - 26471063
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaat 205  Q
    |||||||||||||||||| || ||| ||  |||||||||||||||||||||||||||||||    
T  26471123 ctagatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagtaat 26471063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 12483659 - 12483758
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || |||||| |  ||||| |||||||||| ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  12483659 ttgggtcaacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 12483758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 26471096 - 26471195
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  26471096 ttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 26471195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 207
Target Start/End: Original strand, 47216730 - 47216833
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  47216730 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 47216829  T
Q  204 atat 207  Q
    ||||    
T  47216830 atat 47216833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 17556858 - 17556752
Alignment:
Q  98 agaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatc-aacttttattaatctaactttctcttataaataggaccgga 196  Q
    ||||| |||| ||||||||| || ||||||||  || || |||||||| | ||||||  ||||||| || | ||||||||||||||||||||||||| ||    
T  17556858 agaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttaacttttgttgacctaactttctcttataaataggaccaga 17556759  T
Q  197 gggagta 203  Q
    |||||||    
T  17556758 gggagta 17556752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 17556825 - 17556883
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | || ||||||||||||||||||||||||||||||    
T  17556825 ctagatacatcaacttttgttgacccaagtttctcttataaataggaccggagggagta 17556883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 39402024 - 39401962
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaatat 207  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||||||    
T  39402024 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaatat 39401962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 197
Target Start/End: Complemental strand, 14984974 - 14984843
Alignment:
Q  65 tgattaatactaccttcgatcatatttataaaaagaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttat 164  Q
    ||||||||||| ||| || || ||||||||| | |||  |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| |    
T  14984974 tgattaatactccctccggtcctatttataaga-gaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgt 14984876  T
Q  165 taatctaactttctcttataaataggaccggag 197  Q
    | | |||| ||||||||||||||||||||||||    
T  14984875 tgacctaaatttctcttataaataggaccggag 14984843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 31842853 - 31842793
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaat 205  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||||    
T  31842853 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 31842793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 47777539 - 47777479
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaat 205  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||||    
T  47777539 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 47777479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 47969794 - 47969694
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctc-ttataaataggaccggagggagt 202  Q
    |||||||||||||| || ||||||||  || || |||||||||| ||||||  |||||| || | |||| |||||| |||||||||||||||||| ||||    
T  47969794 ttggatcaacaaaagttgatgtatctagttaaaaattcagtctaaatacatttacttttgttgacctaaatttctctttataaataggaccggagagagt 47969695  T
Q  203 a 203  Q
    |    
T  47969694 a 47969694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 9981746 - 9981647
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  9981746 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 9981647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 204
Target Start/End: Original strand, 11796005 - 11796064
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaa 204  Q
    |||||||||||||||||| || | | ||  ||||||||||||||||||||||||||||||    
T  11796005 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaa 11796064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 11897129 - 11897184
Alignment:
Q  148 gatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||||| || | | || ||||||||||||||||||||||||||||||    
T  11897129 gatacatcaacttttgttgacccaaatttctcttataaataggaccggagggagta 11897184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 12062654 - 12062568
Alignment:
Q  108 atcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccgg 195  Q
    ||||||||||||| |||||||||||| || ||| | || |||||||||||||||| || ||| || | ||| ||||||||||||||||    
T  12062654 atcaacaaaaattaatgtatctgattaaaaattgaatc-agatacatcaacttttgttgatcaaaatatcttttataaataggaccgg 12062568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 25694418 - 25694319
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || ||||| || | ||||||  ||||||||| |||||| |||||||||||||||||| | |||||||||    
T  25694418 ttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgatctaaatttctcttataaataggatcagagggagta 25694319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 27159389 - 27159488
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  27159389 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 27159488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 30800517 - 30800466
Alignment:
Q  111 aacaaaaatttatgtatctgattcaagattcagtctagatacatcaactttt 162  Q
    ||||||| || ||||||||||||||| ||||||| |||||||||||||||||    
T  30800517 aacaaaagttgatgtatctgattcaaaattcagtatagatacatcaactttt 30800466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 31842826 - 31842925
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  31842826 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 39401997 - 39402096
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  39401997 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 39402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 44668124 - 44668223
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  44668124 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44668223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 195
Target Start/End: Original strand, 47777512 - 47777603
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccgg 195  Q
    |||| ||||||||| || ||||||||  ||||| |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||    
T  47777512 ttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgg 47777603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 14984909 - 14984967
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  14984909 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 14984967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 25694391 - 25694449
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  25694391 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 25694449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 27159416 - 27159358
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  27159416 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 44668151 - 44668093
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  44668151 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 44955264 - 44955212
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggag 197  Q
    |||||||||||||||||| || | ||||  |||||||||||||||||||||||    
T  44955264 ctagatacatcaacttttgttgacctaaaattctcttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 205
Target Start/End: Original strand, 44955242 - 44955338
Alignment:
Q  109 tcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaat 205  Q
    ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||| ||||||||||||||||||||| ||||||    
T  44955242 tcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagtaat 44955338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 203
Target Start/End: Original strand, 47588332 - 47588467
Alignment:
Q  67 attaatactaccttcgatcatatttataaaaagaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttatta 166  Q
    ||||||||| |||||| |  ||||||||| | |||  |||| ||||||||| || |||||||| ||| || |||||||| | ||||||  |||||| ||     
T  47588332 attaatactcccttcggttttatttataaga-gaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttg 47588430  T
Q  167 atctaactttctcttataaataggaccggagggagta 203  Q
    | |||| ||||||||||||||| |||| |||| ||||    
T  47588431 acctaaatttctcttataaataagaccagaggtagta 47588467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 9981719 - 9981774
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggaggga 200  Q
    |||||||||||||||||| || | | ||  ||||||||||||||||||||||||||    
T  9981719 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 9981774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 11796032 - 11795933
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | || |||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  11796032 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 11795933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 23278032 - 23278131
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  | |||| || | |||| ||||||||||||||||||||||||| ||||    
T  23278032 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 34042795 - 34042696
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  | |||| || | |||| ||||||||||||||||||||||||| ||||    
T  34042795 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 34042696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 47969767 - 47969830
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaatatt 208  Q
    |||||||||||||||||| || ||| ||  || | |||||||||||||||||||||||| ||||    
T  47969767 ctagatacatcaacttttgttgatccaaaattattttataaataggaccggagggagtattatt 47969830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 1050960 - 1051018
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||  || | | ||  |||||||||||||||||||||||||||||    
T  1050960 ctagatacatcaactttagttgacccaaaattctcttataaataggaccggagggagta 1051018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 208
Target Start/End: Complemental strand, 9301951 - 9301913
Alignment:
Q  170 taactttctcttataaataggaccggagggagtaatatt 208  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  9301951 taactgtctcttgtaaataggaccggagggagtaatatt 9301913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 193
Target Start/End: Original strand, 12062594 - 12062679
Alignment:
Q  107 gatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggacc 193  Q
    ||||||||||| || |||||||||||||||  || | || |||||||| || |||| || || ||| ||||||||||||||||||||    
T  12062594 gatcaacaaaagttgatgtatctgattcaatttttaatc-agatacattaatttttgttgatttaaatttctcttataaataggacc 12062679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 12483682 - 12483628
Alignment:
Q  149 atacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  12483682 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 12483628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 34042768 - 34042826
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  ||||||||||||||| |||||||||||||    
T  34042768 ctagatacatcaacttttgttgacccaaaattctcttataaatagaaccggagggagta 34042826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 47216757 - 47216699
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  ||||||||||||||| |||||||||||||    
T  47216757 ctagatacatcaacttttgttgacccaaaattctcttataaatagtaccggagggagta 47216699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 205
Target Start/End: Complemental strand, 1050987 - 1050886
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||| ||| || ||||||||  || || |||||||| | || |||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  1050987 ttgggtcaactaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 1050888  T
Q  204 at 205  Q
    ||    
T  1050887 at 1050886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 11989857 - 11989914
Alignment:
Q  149 atacatcaacttttattaatctaactttctcttataaataggaccggagggagtaata 206  Q
    ||||||||| ||||||| |   || ||||| |||||||||||||||||||||||||||    
T  11989857 atacatcaatttttattgactcaaatttcttttataaataggaccggagggagtaata 11989914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 12213499 - 12213604
Alignment:
Q  98 agaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggag 197  Q
    ||||| |||| |||||||||||| || ||| |  || || ||||| |||| |||||| || |||| || | ||||| |||||||||||||| ||| ||||    
T  12213499 agaaacttgggtcaacaaaaattgatttatttagttaaaaattcaatctaaatacattaatttttgttgacctaacattctcttataaataagactggag 12213598  T
Q  198 ggagta 203  Q
    ||||||    
T  12213599 ggagta 12213604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 2961135 - 2961103
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    ||||||||||| |||||||||||||||||||||    
T  2961135 aactttctcttgtaaataggaccggagggagta 2961103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 26924244 - 26924212
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    |||||| ||||||||||||||||||||||||||    
T  26924244 aactttttcttataaataggaccggagggagta 26924212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 28359102 - 28359070
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||||||||| ||||||||    
T  28359102 aactttctcttataaataggaccgaagggagta 28359070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 17344318 - 17344213
Alignment:
Q  98 agaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggag 197  Q
    ||||| |||||||||||||| || ||||||| |||| || |||||||  |||||||||||||||| || || |||||||||||||||||||| |||||||    
T  17344318 agaaatttggatcaacaaaagttgatgtatccgattaaaaattcagttcagatacatcaacttttgttgatttaactttctcttataaatagaaccggag 17344219  T
Q  198 ggagta 203  Q
     |||||    
T  17344218 cgagta 17344213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 205
Target Start/End: Original strand, 6121924 - 6122025
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || |||||| ||||||||||||||||||||||||| ||||    
T  6121924 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 6122023  T
Q  204 at 205  Q
    ||    
T  6122024 at 6122025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 40913214 - 40913319
Alignment:
Q  98 agaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggag 197  Q
    ||||| |||||||||||||| || || ||||   || || |||||||| | ||||||  |||||| || |||||| ||||||||||||||||||||||||    
T  40913214 agaaatttggatcaacaaaagttgatatatccagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggag 40913313  T
Q  198 ggagta 203  Q
    ||||||    
T  40913314 ggagta 40913319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 204
Target Start/End: Original strand, 42797804 - 42797863
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaa 204  Q
    |||||||||||||||||| || | ||||  ||||||||||||||||||||||||||||||    
T  42797804 ctagatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagtaa 42797863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 53337442 - 53337500
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||||||||||| | | ||  |||||||||||||||||||||||||||||    
T  53337442 ctagatacatcaacttttattgacccaaaattctcttataaataggaccggagggagta 53337500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 204
Target Start/End: Complemental strand, 24704501 - 24704369
Alignment:
Q  71 atactaccttcgatcatatttataaaaagaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatct 170  Q
    ||||| ||| ||||| ||||||||| | |||  |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | ||    
T  24704501 atactccctccgatcctatttataaga-gaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 24704403  T
Q  171 aactttctcttataaataggaccggagggagtaa 204  Q
    || ||||||||||||||||||||||||| |||||    
T  24704402 aaatttctcttataaataggaccggaggtagtaa 24704369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 51894638 - 51894577
Alignment:
Q  147 agatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaatatt 208  Q
    |||||||||||||||| || | | ||  ||||||||||||||||||||||||||||||||||    
T  51894638 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaatatt 51894577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 43900641 - 43900549
Alignment:
Q  111 aacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||||||||    
T  43900641 aacaaaagttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacctaaatttctcttataaataggaccggagggagta 43900549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 208
Target Start/End: Complemental strand, 47833710 - 47833606
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  47833710 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 47833611  T
Q  204 atatt 208  Q
     ||||    
T  47833610 ttatt 47833606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 207
Target Start/End: Complemental strand, 52756806 - 52756671
Alignment:
Q  71 atactaccttcgatcatatttataaaaagaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatct 170  Q
    ||||| |||||| || ||||||||||| |||  |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||| | || | ||    
T  52756806 atactcccttcggtcctatttataaaa-gaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacct 52756708  T
Q  171 aactttctcttataaataggaccggagggagtaatat 207  Q
    || ||||||||||||||||||||||||  ||||||||    
T  52756707 aaatttctcttataaataggaccggagatagtaatat 52756671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 3372220 - 3372121
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  3372220 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3372121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 3422132 - 3422195
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaatatt 208  Q
    |||||||||||||||||| || | | ||  ||||||||||||||||||||||||||||| ||||    
T  3422132 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattatt 3422195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 7579409 - 7579310
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || ||||| || | ||||||  |||||| |||| |||| ||||||||||||||||||||||||| ||||    
T  7579409 ttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttctcttataaataggaccggaggtagta 7579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 20538717 - 20538816
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  20538717 ttgggtcaacaaaatttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 204
Target Start/End: Original strand, 43900621 - 43900680
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaa 204  Q
    |||||||||||||||||| |||| | ||  |||||||||||||||||||||||| |||||    
T  43900621 ctagatacatcaacttttgttaacccaaaattctcttataaataggaccggaggaagtaa 43900680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 47838675 - 47838612
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaatatt 208  Q
    |||||||||||||||||| || | | ||  ||||||||||||||||||||||||||||| ||||    
T  47838675 ctagatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtattatt 47838612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 48336362 - 48336263
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  48336362 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 48336263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 6121951 - 6121893
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  6121951 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 40913244 - 40913190
Alignment:
Q  148 gatacatcaacttttattaatctaactttctcttataaataggaccggagggagt 202  Q
    |||| |||||||||| || ||| || |||||||||||||||||||||||||||||    
T  40913244 gatatatcaacttttgttgatccaaatttctcttataaataggaccggagggagt 40913190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 41615730 - 41615676
Alignment:
Q  149 atacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||| || ||| || ||||||||||||||||||||||| ||||||    
T  41615730 atacatcaacttttgttgatccaattttctcttataaataggaccggatggagta 41615676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 47833683 - 47833741
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  47833683 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 20538744 - 20538683
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaata 206  Q
    ||||||||||||| |||| || | | ||  ||||||||||||||||||||||||||||||||    
T  20538744 ctagatacatcaaattttgttgacccaaaattctcttataaataggaccggagggagtaata 20538683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 41469823 - 41469766
Alignment:
Q  146 tagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  41469823 tagatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 41469766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 41615701 - 41615794
Alignment:
Q  98 agaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaatagga 191  Q
    |||||||||||||||||||| || |||||| |  || || ||| |||| | |||||| ||||||| || | |||| ||||||||||||||||||    
T  41615701 agaaaattggatcaacaaaagttgatgtatttagttaaaaattaagtccaaatacattaacttttgttgacctaattttctcttataaatagga 41615794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 4780369 - 4780425
Alignment:
Q  147 agatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||| ||||||| || | | || ||||||||||||||||||||||||||||||    
T  4780369 agatacattaacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 17472015 - 17471943
Alignment:
Q  95 aaaagaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaa 167  Q
    |||||||||||| ||| | ||||  |||||||||| ||| || |||||||||| |||||||||||||| ||||    
T  17472015 aaaagaaaattgaatcgataaaagcttatgtatctaatttaaaattcagtctaaatacatcaactttttttaa 17471943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 50430449 - 50430533
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaata 188  Q
    |||| |||||||||||| ||||||||| || || ||||| || | |||||||||||||| || | | ||||| ||||||||||||    
T  50430449 ttgggtcaacaaaaattgatgtatctggttaaaaattcaatccaaatacatcaacttttgttgacccaacttgctcttataaata 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 204
Target Start/End: Complemental strand, 53337469 - 53337369
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| |||| |||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  53337469 ttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 53337370  T
Q  204 a 204  Q
    |    
T  53337369 a 53337369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 3904714 - 3904813
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| |||||||||||| |||||| |  || || |||||||| | ||||||  |||||| || | |||| ||||| ||||||||||||||||||| ||||    
T  3904714 ttgggtcaacaaaaattgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccggaggtagta 3904813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 3993075 - 3992976
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | | || ||||||||||||||||||||||||| ||||    
T  3993075 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggaccggaggtagta 3992976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 203
Target Start/End: Complemental strand, 33551292 - 33551201
Alignment:
Q  112 acaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  33551292 acaaaagttgatgtatctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 33551201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 48336335 - 48336398
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaatatt 208  Q
    |||||||||||||||||| || | | ||  || |||||||||||||||||||||||||| ||||    
T  48336335 ctagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtattatt 48336398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 51894613 - 51894712
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||| || || |||||||| | | ||||  |||||| || | |||| ||| ||||||||||||||||||||| ||||    
T  51894613 ttgggtcaacaaaagttgatgtatctggttaaaaattcagtccaaaaacattcacttttgttgacctaaatttttcttataaataggaccggaggtagta 51894712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 3372193 - 3372251
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  || ||||||||||||||||||||||||||    
T  3372193 ctagatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagta 3372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 3993048 - 3993106
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||| ||||||||||||||    
T  3993048 ctagatacatcaacttttgttgacccaaaattctcttataaataagaccggagggagta 3993106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 207
Target Start/End: Original strand, 29845743 - 29845773
Alignment:
Q  177 ctcttataaataggaccggagggagtaatat 207  Q
    |||||||||||||||||||||||||||||||    
T  29845743 ctcttataaataggaccggagggagtaatat 29845773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 33621868 - 33621926
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  || ||||||||||||||||||||||||||    
T  33621868 ctagatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagta 33621926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 203
Target Start/End: Complemental strand, 42797826 - 42797732
Alignment:
Q  109 tcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||| ||||||||||||| ||||    
T  42797826 tcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttatatataggaccggaggtagta 42797732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 46797797 - 46797855
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||| |||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  46797797 ctagatatatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 25855192 - 25855083
Alignment:
Q  94 aaaaagaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggacc 193  Q
    ||||| |||||||| || |||||| |  |||||| || || || |||||||| | |||||| ||||||| || |   |||||||||| ||||||||||||    
T  25855192 aaaaaaaaaattgggtctacaaaagtcgatgtatttggttaaaaattcagtccaaatacattaacttttgttgactcaactttctctcataaataggacc 25855093  T
Q  194 ggagggagta 203  Q
     |||||||||    
T  25855092 tgagggagta 25855083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 1716357 - 1716301
Alignment:
Q  147 agatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||| || | | || | ||||||||||||| ||||||||||||||    
T  1716357 agatacatcaacttttgttgaccaaattatctcttataaataagaccggagggagta 1716301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 2385226 - 2385194
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    ||||||||||| |||||||||||||||||||||    
T  2385226 aactttctcttgtaaataggaccggagggagta 2385194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 203
Target Start/End: Complemental strand, 3904711 - 3904683
Alignment:
Q  175 ttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||||||||||||||    
T  3904711 ttctcttataaataggaccggagggagta 3904683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 6246725 - 6246757
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    ||||||||||| |||||||||||||||||||||    
T  6246725 aactttctcttgtaaataggaccggagggagta 6246757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 28536809 - 28536751
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||||||||||| ||| ||  |||||||||||||||||||||||||||||    
T  28536809 ctagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 28536751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 22285798 - 22285699
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||||||||    
T  22285798 ttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 22285699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 207
Target Start/End: Original strand, 31319430 - 31319533
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  31319430 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 31319529  T
Q  204 atat 207  Q
    ||||    
T  31319530 atat 31319533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 36016227 - 36016326
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||||||||    
T  36016227 ttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 208
Target Start/End: Original strand, 1738442 - 1738582
Alignment:
Q  67 attaatactaccttcgatcatatttataaaaagaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttatta 166  Q
    ||||||||| ||| || || ||||||||| | |||  |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| ||     
T  1738442 attaatactccctccggtcctatttataaga-gaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttg 1738540  T
Q  167 atctaactttctcttataaataggaccggagggagtaatatt 208  Q
    | |||| ||||||||||||||||||||||||| |||| ||||    
T  1738541 acctaaatttctcttataaataggaccggaggtagtattatt 1738582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 7269430 - 7269535
Alignment:
Q  98 agaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggag 197  Q
    ||||| |||| | ||||||| || ||| ||||| || || ||||||| |||||||||||| |||| || | | |||||| ||||||||||| ||||||||    
T  7269430 agaaagttgggttaacaaaagttgatgcatctggttaaaaattcagtttagatacatcaatttttgttgacccaactttttcttataaataagaccggag 7269529  T
Q  198 ggagta 203  Q
    ||||||    
T  7269530 ggagta 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 9575481 - 9575541
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaat 205  Q
    ||||||||||||| |||| || | | |||||||||||||||||||||||| ||||||||||    
T  9575481 ctagatacatcaagttttgttgaccaaactttctcttataaataggaccgaagggagtaat 9575541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 46840932 - 46840992
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaat 205  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||||    
T  46840932 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 46840992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 1565760 - 1565859
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  1565760 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 1565859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 7240848 - 7240749
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  7240848 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 7240749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 7240821 - 7240884
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaatatt 208  Q
    |||||||||||||||||| || | | ||  ||||||||||||||||||||||||||||| ||||    
T  7240821 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattatt 7240884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 7482297 - 7482360
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaatatt 208  Q
    |||||||||||||||||| || | | ||  ||||||||||||||||||||||||||||| ||||    
T  7482297 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattatt 7482360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 203
Target Start/End: Complemental strand, 9575539 - 9575409
Alignment:
Q  72 tactaccttcgatcatatttataaaaagaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatcta 171  Q
    |||| |||||| || ||||||||| | |||| || | ||||||||| || ||||||||  || || |||||||||| |||| | ||||||| || | | |    
T  9575539 tactcccttcggtcctatttataaga-gaaagtttggtcaacaaaacttgatgtatctagttaaaaattcagtctaaatacgttaacttttgttgaccca 9575441  T
Q  172 actttctcttataaataggaccggagggagta 203  Q
    ||||||||||| |||||||||| |||||||||    
T  9575440 actttctcttacaaataggaccagagggagta 9575409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 38063944 - 38064043
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  38063944 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 38064043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 46840959 - 46840860
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  46840959 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 46840860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 1738505 - 1738447
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  1738505 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 1738447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 4790320 - 4790378
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||||||||||| | | ||  |||||||||||||||||||||||| ||||    
T  4790320 ctagatacatcaacttttattgacccaaaattctcttataaataggaccggaggaagta 4790378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 9268828 - 9268886
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  9268828 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9268886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 203
Target Start/End: Complemental strand, 36583528 - 36583395
Alignment:
Q  69 taatactaccttcgatcatatttataaaaagaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaat 168  Q
    ||||||| ||| ||||| ||||||||| | |||  |||| ||||||||| || ||||||||  || || ||| |||| | ||||||  |||||| || |     
T  36583528 taatactccctccgatcctatttataaga-gaattttgggtcaacaaaagttgatgtatctagttaaaaattaagtccaaatacattcacttttgttgac 36583430  T
Q  169 ctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||||||||||||||||||| ||||    
T  36583429 ctaaatttctcttataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 7269461 - 7269412
Alignment:
Q  147 agatacatcaacttttattaatctaactttctcttataaataggaccgga 196  Q
    |||| ||||||||||| |||| | ||||||||||||||||||||||||||    
T  7269461 agatgcatcaacttttgttaacccaactttctcttataaataggaccgga 7269412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 22285772 - 22285829
Alignment:
Q  146 tagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  22285772 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 5347754 - 5347722
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||||||||||||||||||    
T  5347754 aactttctcttataaataggaccggagggagta 5347722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 23314197 - 23314137
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaat 205  Q
    ||||||| |||||||||| || | | ||  |||||||||||||||||||||||||||||||    
T  23314197 ctagatatatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 23314137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 7482324 - 7482225
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||  | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  7482324 ttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 7482225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 9268855 - 9268756
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| |||||||||||||||||||| |||| ||||    
T  9268855 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagta 9268756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 206
Target Start/End: Original strand, 10007693 - 10007728
Alignment:
Q  171 aactttctcttataaataggaccggagggagtaata 206  Q
    |||||| |||||||||||||||||||||||||||||    
T  10007693 aactttttcttataaataggaccggagggagtaata 10007728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 21393147 - 21393217
Alignment:
Q  70 aatactaccttcgatcatatttataaaaagaaaattggatcaacaaaaatttatgtatctgattcaagattc 141  Q
    ||||||||| |||||| | |||||||||| |||||||  ||||||||| |||||||||||||| ||| ||||    
T  21393147 aatactaccgtcgatcttgtttataaaaa-aaaattgagtcaacaaaagtttatgtatctgatccaaaattc 21393217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 23314170 - 23314269
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || || |||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  23314170 ttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 28536782 - 28536881
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||| |||| || ||||||||  || || ||||| || | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  28536782 ttggatcaataaaagttgatgtatctagttaaaaattcattccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 28536881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 205
Target Start/End: Original strand, 32811493 - 32811528
Alignment:
Q  170 taactttctcttataaataggaccggagggagtaat 205  Q
    ||||||| ||||||||||||||||||||||||||||    
T  32811493 taactttttcttataaataggaccggagggagtaat 32811528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 94376 - 94318
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  ||||||||||||||||| |||||||||||    
T  94376 ctagatacatcaacttttgttgacccaaaattctcttataaataggatcggagggagta 94318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 7463570 - 7463604
Alignment:
Q  174 tttctcttataaataggaccggagggagtaatatt 208  Q
    |||||||||||||||||||| ||||||||||||||    
T  7463570 tttctcttataaataggaccagagggagtaatatt 7463604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 31319457 - 31319399
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  ||||||||||||||| |||||||||||||    
T  31319457 ctagatacatcaacttttgttgacccaaaattctcttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 36583467 - 36583525
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  ||||||||||||||||| |||||||||||    
T  36583467 ctagatacatcaacttttgttgacccaaaattctcttataaataggatcggagggagta 36583525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 38063971 - 38063913
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  ||||||||||||||||||| |||||||||    
T  38063971 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccagagggagta 38063913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 38441532 - 38441590
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||| ||||    
T  38441532 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggaagta 38441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 197
Target Start/End: Original strand, 94349 - 94442
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggag 197  Q
    |||| ||||||||| || ||||||||  || || |||| ||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||    
T  94349 ttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 94442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 7661129 - 7661076
Alignment:
Q  150 tacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||| |  ||| |||||||||||||||||| || ||||||||    
T  7661129 tacatcaacttttattgacataaatttctcttataaataggatcgaagggagta 7661076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 12426562 - 12426529
Alignment:
Q  170 taactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||||||||| ||||||||||||||    
T  12426562 taactttctcttataaataagaccggagggagta 12426529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 36016253 - 36016192
Alignment:
Q  146 tagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaatat 207  Q
    ||||||||||||||||| || | | ||  ||||||||||||||||||| || ||||||||||    
T  36016253 tagatacatcaacttttgttgacccaaaattctcttataaataggaccagatggagtaatat 36016192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 2523887 - 2523919
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    |||||| ||||||||||||||||||||||||||    
T  2523887 aactttttcttataaataggaccggagggagta 2523919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 20397932 - 20397964
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    ||||||||||| |||||||||||||||||||||    
T  20397932 aactttctcttgtaaataggaccggagggagta 20397964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 34281700 - 34281668
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    ||||||||||| |||||||||||||||||||||    
T  34281700 aactttctcttgtaaataggaccggagggagta 34281668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 198
Target Start/End: Complemental strand, 28463689 - 28463616
Alignment:
Q  125 tatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagg 198  Q
    |||||| ||||| |||||||| | |||||||||||||| || | | ||||||||||||||||||||||||||||    
T  28463689 tatctggttcaaaattcagtccaaatacatcaacttttgttgacccaactttctcttataaataggaccggagg 28463616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 205
Target Start/End: Original strand, 39571234 - 39571335
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || |||||| ||||||||||||||||||||||||| ||||    
T  39571234 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 39571333  T
Q  204 at 205  Q
    ||    
T  39571334 at 39571335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 24692001 - 24692108
Alignment:
Q  95 aaaagaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccg 194  Q
    |||||||| |||| ||||||||| || || |||||| || || |||||||  |||||||||||||||| || | |||||||| |||||||||||||| ||    
T  24692001 aaaagaaatttgggtcaacaaaagttgatatatctggttaaa-attcagttcagatacatcaacttttgttgacctaactttttcttataaataggatcg 24692099  T
Q  195 gagggagta 203  Q
     ||||||||    
T  24692100 aagggagta 24692108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 31654721 - 31654613
Alignment:
Q  95 aaaagaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccg 194  Q
    |||||||  |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| |||||||||||||||||||||    
T  31654721 aaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 31654622  T
Q  195 gagggagta 203  Q
    |||||||||    
T  31654621 gagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 207
Target Start/End: Complemental strand, 6552754 - 6552651
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  6552754 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6552655  T
Q  204 atat 207  Q
    ||||    
T  6552654 atat 6552651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 7012270 - 7012171
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||| || ||||||||  || || |||||||| | ||| ||  |||||| || |||||| ||||||||||||||||||||||||| ||||    
T  7012270 ttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 8587224 - 8587165
Alignment:
Q  149 atacatcaacttttattaatctaactttctcttataaataggaccggagggagtaatatt 208  Q
    |||||||||||||| || | | ||||||||||||||||||||||||||||||||| ||||    
T  8587224 atacatcaacttttgttgaccaaactttctcttataaataggaccggagggagtactatt 8587165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 200
Target Start/End: Complemental strand, 17007005 - 17006914
Alignment:
Q  109 tcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggaggga 200  Q
    |||| |||| || |||||||||||| |  |||||||| |||| ||||||||||| || | | ||||||||||||||||||||| ||||||||    
T  17007005 tcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggaggga 17006914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 200
Target Start/End: Original strand, 17570242 - 17570333
Alignment:
Q  109 tcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggaggga 200  Q
    |||| |||| || |||||||||||| |  |||||||| |||| ||||||||||| || | | ||||||||||||||||||||| ||||||||    
T  17570242 tcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggaggga 17570333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 32114506 - 32114605
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| |||||||||||| ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  32114506 ttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 208
Target Start/End: Complemental strand, 33057688 - 33057589
Alignment:
Q  109 tcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaatatt 208  Q
    |||||||||||| ||||||||| || ||  |||| ||  |||||| ||| |||| || ||| |||||| |||||||||||||||||||||||||| ||||    
T  33057688 tcaacaaaaattgatgtatctggttaaaatttcactccggatacaacaatttttgttgatccaactttgtcttataaataggaccggagggagtattatt 33057589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 44498245 - 44498187
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||||||||||| | | ||  |||||||||||||||||||||||||||||    
T  44498245 ctagatacatcaacttttattgacccaaaattctcttataaataggaccggagggagta 44498187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 208
Target Start/End: Original strand, 54643 - 54747
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  54643 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 54742  T
Q  204 atatt 208  Q
     ||||    
T  54743 ttatt 54747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 2890193 - 2890292
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  2890193 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 2890292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 3304309 - 3304408
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  3304309 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 7785809 - 7785908
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  7785809 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 7785908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 204
Target Start/End: Original strand, 12343176 - 12343271
Alignment:
Q  109 tcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaa 204  Q
    ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| |||||    
T  12343176 tcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaa 12343271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 32211394 - 32211493
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| |||||||||||| ||||||||  || || |||||||| | ||||||  | |||| || | |||| ||||||||||||||||||||||||| ||||    
T  32211394 ttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 32211493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 33289292 - 33289391
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||| | || |||||| ||||||||||||||||||||||||| ||||    
T  33289292 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgatctaaatttctcttataaataggaccggaggtagta 33289391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 54670 - 54612
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  54670 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 54612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 2890220 - 2890162
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  2890220 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 2890162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 6552727 - 6552785
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  6552727 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 7012243 - 7012301
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || ||| ||  |||||||||||||||||||||||| ||||    
T  7012243 ctagatacatcaacttttgttgatccaaaattctcttataaataggaccggaggaagta 7012301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 7785836 - 7785778
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  7785836 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 7785778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 33289319 - 33289261
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  33289319 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 39571261 - 39571203
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  39571261 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 39571203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 43199412 - 43199354
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  43199412 ctagatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 43199354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 203
Target Start/End: Original strand, 43199390 - 43199484
Alignment:
Q  109 tcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  43199390 tcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 43199484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 7805730 - 7805829
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||| ||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  7805730 ttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 7805829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 12763685 - 12763784
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||| ||||||||| ||||    
T  12763685 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 12763784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 15888383 - 15888482
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || ||||| || | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  15888383 ttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 25601031 - 25601130
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| |||||||||||||||||| |||||| ||||    
T  25601031 ttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 25601130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 44498218 - 44498317
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| |||| |||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  44498218 ttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 3304336 - 3304278
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  || ||||||||||||||||||||||||||    
T  3304336 ctagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 3304278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 7805757 - 7805699
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||||||||  | | | ||  |||||||||||||||||||||||||||||    
T  7805757 ctagatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagta 7805699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 8587242 - 8587300
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||||||||||| |   || ||||||||||||||| ||||||||| ||||    
T  8587242 ctagatacatcaacttttattgactcaagtttctcttataaataagaccggaggaagta 8587300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 12763712 - 12763654
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  || ||||||||||||||||||||||||||    
T  12763712 ctagatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagta 12763654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 25601058 - 25601000
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||| ||||||| || | | ||  |||||||||||||||||||||||||||||    
T  25601058 ctagatacattaacttttgttgacccaaaattctcttataaataggaccggagggagta 25601000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 32211421 - 32211363
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||| |||| || | | ||  |||||||||||||||||||||||||||||    
T  32211421 ctagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 32211363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 34157781 - 34157815
Alignment:
Q  174 tttctcttataaataggaccggagggagtaatatt 208  Q
    |||||||| ||||||||||||||||||||||||||    
T  34157781 tttctcttgtaaataggaccggagggagtaatatt 34157815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 13246803 - 13246883
Alignment:
Q  81 cgatcatatttataaaaagaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaactttt 162  Q
    ||||| ||||||||| | |||| ||||||||||||||||  |||||| ||| | || |||||||| |||||||| |||||||    
T  13246803 cgatcctatttataaga-gaaatttggatcaacaaaaatgaatgtatttgactaaaaattcagtccagatacatgaactttt 13246883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 207
Target Start/End: Original strand, 45145985 - 45146018
Alignment:
Q  174 tttctcttataaataggaccggagggagtaatat 207  Q
    |||||||| |||||||||||||||||||||||||    
T  45145985 tttctcttgtaaataggaccggagggagtaatat 45146018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 2339407 - 2339439
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    ||||||||||| |||||||||||||||||||||    
T  2339407 aactttctcttgtaaataggaccggagggagta 2339439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 12343198 - 12343146
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggag 197  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||    
T  12343198 ctagatacatcaacttttgttgaccaaaaattctcttataaataggaccggag 12343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 15688086 - 15688038
Alignment:
Q  147 agatacatcaacttttattaatctaactttctcttataaataggaccgg 195  Q
    |||||||||||||||| || | | |||||||||||||||| ||||||||    
T  15688086 agatacatcaacttttgttgacccaactttctcttataaacaggaccgg 15688038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 22781999 - 22782031
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||||||||||||| ||||    
T  22781999 aactttctcttataaataggaccggaggaagta 22782031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 27793314 - 27793346
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    ||||||||||| |||||||||||||||||||||    
T  27793314 aactttctcttgtaaataggaccggagggagta 27793346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 28999113 - 28999181
Alignment:
Q  138 attcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaata 206  Q
    |||||||||||||||||||| |||| || | | |||||||| |||||||||  |||| | |||||||||    
T  28999113 attcagtctagatacatcaatttttgttgaccaaactttcttttataaataaaaccgaatggagtaata 28999181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 31654685 - 31654745
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaat 205  Q
    |||||||||||||||||| || | | ||  |||| ||||||||||||||||||| ||||||    
T  31654685 ctagatacatcaacttttgttgacccaaaattcttttataaataggaccggaggaagtaat 31654745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 33057668 - 33057724
Alignment:
Q  147 agatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||| |||| || | | |||||||||||||||||| ||||||| ||||||    
T  33057668 agatacatcaatttttgttgaccaaactttctcttataaataagaccggatggagta 33057724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 34028500 - 34028532
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    ||||||||||| |||||||||||||||||||||    
T  34028500 aactttctcttgtaaataggaccggagggagta 34028532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 203
Target Start/End: Complemental strand, 20848167 - 20848074
Alignment:
Q  110 caacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||| ||||||||  || || |||||||| | ||||||  ||||||||| | |||| ||||||||||||||||||||||||| ||||    
T  20848167 caacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagta 20848074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 194
Target Start/End: Complemental strand, 966253 - 966157
Alignment:
Q  98 agaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccg 194  Q
    ||||| ||||||||||||||||  ||||||||| || || |||||||| |||||||| |||| || || ||  ||||||||||| ||||||||||||    
T  966253 agaaatttggatcaacaaaaatgaatgtatctggttaaaaattcagtcaagatacatgaactgttgttgattcaactttctcttgtaaataggaccg 966157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 208
Target Start/End: Complemental strand, 9395449 - 9395345
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  9395449 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 9395350  T
Q  204 atatt 208  Q
    |||||    
T  9395349 atatt 9395345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 203
Target Start/End: Complemental strand, 13033184 - 13033051
Alignment:
Q  69 taatactaccttcgatcatatttataaaaagaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaat 168  Q
    ||||||| ||| ||||| ||||||||| | |||  |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || |     
T  13033184 taatactccctccgatcctatttataaga-gaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgac 13033086  T
Q  169 ctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||||||||||||||||||| ||||    
T  13033085 ctaaatttctcttataaataggaccggaggaagta 13033051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 37642026 - 37642084
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||||||||||| | | ||  |||||||||||||||||||||||||||||    
T  37642026 ctagatacatcaacttttattgacccaaaattctcttataaataggaccggagggagta 37642084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 14325879 - 14325975
Alignment:
Q  87 tatttataaaaagaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttata 184  Q
    ||||||||| || |||||| |||||||||||||| |||||| |||||||| ||| |||||||||| ||||| |||| ||||   || |||||||||||    
T  14325879 tatttataagaa-aaaatttgatcaacaaaaattaatgtatttgattcaaaatttagtctagatatatcaaattttgttaactcaattttctcttata 14325975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 21576019 - 21576076
Alignment:
Q  146 tagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||||||| || ||| ||  |||||||||||||||||||||||||||||    
T  21576019 tagatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagta 21576076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 3549601 - 3549553
Alignment:
Q  149 atacatcaacttttattaatctaactttctcttataaataggaccggag 197  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  3549601 atacatcaacttttgttaatataaatttctcttataaataggaccggag 3549553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 4444056 - 4443960
Alignment:
Q  107 gatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||| || ||||||||  || || |||||||||| ||||||  |||||| || | |||| ||||||||||||||||||||| ||| ||||    
T  4444056 gatcaacaaaagttgatgtatctatttaaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggaagta 4443960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 208
Target Start/End: Original strand, 37148986 - 37149090
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  37148986 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37149085  T
Q  204 atatt 208  Q
     ||||    
T  37149086 ttatt 37149090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 9395422 - 9395485
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaatatt 208  Q
    |||||||||||||||||| || | | ||  ||||||||||||||||||||||||||||| ||||    
T  9395422 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattatt 9395485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 13103123 - 13103024
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  13103123 ttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagta 13103024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 4444033 - 4444087
Alignment:
Q  146 tagatacatcaacttttattaatctaactttctcttataaataggaccggaggga 200  Q
    ||||||||||||||||| || ||||||  |||||||||||||| |||||||||||    
T  4444033 tagatacatcaacttttgttgatctaaaattctcttataaataagaccggaggga 4444087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 6126896 - 6126954
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  6126896 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 13103097 - 13103159
Alignment:
Q  146 tagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaatatt 208  Q
    ||||||||||||||||| || | | ||  ||||||||||||||||||||||||||||| ||||    
T  13103097 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattatt 13103159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 17025696 - 17025754
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  17025696 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 17025754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 26350408 - 26350350
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||||||||||| ||  ||  |||| ||||||||||||||||||||||||    
T  26350408 ctagatacatcaacttttattgattcaaaattcttttataaataggaccggagggagta 26350350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 189
Target Start/End: Original strand, 35584388 - 35584489
Alignment:
Q  87 tatttataaaaagaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaa 186  Q
    |||||||||||||||| |||  |||||| ||||| ||||||||||||| | |||||||  || ||||||||||||| || |   || |||||||||||||    
T  35584388 tatttataaaaagaaagttgagtcaacataaattgatgtatctgattcga-attcagttcaggtacatcaacttttgttgactcaattttctcttataaa 35584486  T
Q  187 tag 189  Q
    |||    
T  35584487 tag 35584489  T

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Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 36563596 - 36563538
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  36563596 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 36563538  T

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Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 41989465 - 41989407
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  41989465 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 41989407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 208
Target Start/End: Complemental strand, 583097 - 582984
Alignment:
Q  95 aaaagaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccg 194  Q
    |||||||  |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||| | || | |||| |||||||||||||||||||||    
T  583097 aaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccg 582998  T
Q  195 gagggagtaatatt 208  Q
    |||| |||| ||||    
T  582997 gaggtagtattatt 582984  T

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Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 203
Target Start/End: Original strand, 26350348 - 26350480
Alignment:
Q  70 aatactaccttcgatcatatttataaaaagaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatc 169  Q
    |||||| ||| || || ||||||||||| |||  ||| ||||| |||| || ||||||||  || || |||||||| | ||||||  |||||| || | |    
T  26350348 aatactccctccggtcctatttataaaa-gaattttgaatcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 26350446  T
Q  170 taactttctcttataaataggaccggagggagta 203  Q
    ||| |||||||||||||||||| |||||||||||    
T  26350447 taaatttctcttataaataggatcggagggagta 26350480  T

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Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 36595810 - 36595855
Alignment:
Q  109 tcaacaaaaatttatgtatctgattcaagattcagtctagatacat 154  Q
    |||||||||||| |||||||||||| || |||||||||||||||||    
T  36595810 tcaacaaaaattgatgtatctgattaaaaattcagtctagatacat 36595855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 37149013 - 37148952
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaata 206  Q
    |||||||||||||||||| || | | ||  |||| |||||||||||||||||||||||||||    
T  37149013 ctagatacatcaacttttgttgacccaaaattctattataaataggaccggagggagtaata 37148952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 204
Target Start/End: Complemental strand, 11795267 - 11795167
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| |||||||||||||||||| |||||| ||||    
T  11795267 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 11795168  T
Q  204 a 204  Q
    |    
T  11795167 a 11795167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 17025723 - 17025624
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || ||||||| || ||||||  |||||| |  | |||| ||||||||||||||||||||||||| ||||    
T  17025723 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtttaaatacattcacttttgtggacctaaatttctcttataaataggaccggaggtagta 17025624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 23360041 - 23359942
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| |||||||||||||||||||| |||| ||||    
T  23360041 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagta 23359942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 204
Target Start/End: Original strand, 23360014 - 23360073
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaa 204  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||| |||||    
T  23360014 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtaa 23360073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 205
Target Start/End: Original strand, 29031152 - 29031187
Alignment:
Q  170 taactttctcttataaataggaccggagggagtaat 205  Q
    ||||||| ||||||||||||||||||||||||||||    
T  29031152 taactttttcttataaataggaccggagggagtaat 29031187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 36563569 - 36563668
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| |||||||||||||||||| |||||| ||||    
T  36563569 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 36563668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 41989438 - 41989537
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||| ||||||||||||||| ||||    
T  41989438 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggaccggaggtagta 41989537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 11795240 - 11795298
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||| ||||||||||    
T  11795240 ctagatacatcaacttttgttgacccaaaattctcttataaataggactggagggagta 11795298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 13033124 - 13033186
Alignment:
Q  146 tagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaatatt 208  Q
    ||||||||||||||||| || | | ||  ||||||||||||||||| ||||||||||| ||||    
T  13033124 tagatacatcaacttttgttgacccaaaattctcttataaataggatcggagggagtattatt 13033186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 205
Target Start/End: Original strand, 20848175 - 20848205
Alignment:
Q  175 ttctcttataaataggaccggagggagtaat 205  Q
    |||||||||||||||||||||||||||||||    
T  20848175 ttctcttataaataggaccggagggagtaat 20848205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 205
Target Start/End: Complemental strand, 38361741 - 38361711
Alignment:
Q  175 ttctcttataaataggaccggagggagtaat 205  Q
    |||||||||||||||||||||||||||||||    
T  38361741 ttctcttataaataggaccggagggagtaat 38361711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 37641997 - 37641948
Alignment:
Q  159 ttttattaatctaactttctcttataaataggaccggagggagtaatatt 208  Q
    ||||||| | |||| ||||||||||||||||||||||||| |||| ||||    
T  37641997 ttttattgacctaaatttctcttataaataggaccggaggtagtattatt 37641948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 903997 - 903965
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    ||||||||||| |||||||||||||||||||||    
T  903997 aactttctcttgtaaataggaccggagggagta 903965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 1643461 - 1643493
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||||||||||||||||||||||    
T  1643461 aactgtctcttataaataggaccggagggagta 1643493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 26898308 - 26898340
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    ||||||||||| |||||||||||||||||||||    
T  26898308 aactttctcttgtaaataggaccggagggagta 26898340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 31802989 - 31802957
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    ||||||||||| |||||||||||||||||||||    
T  31802989 aactttctcttgtaaataggaccggagggagta 31802957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 36595830 - 36595782
Alignment:
Q  147 agatacatcaacttttattaatctaactttctcttataaataggaccgg 195  Q
    ||||||||||| |||| || | |||||||||||||||||||| ||||||    
T  36595830 agatacatcaatttttgttgacctaactttctcttataaataagaccgg 36595782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 203
Target Start/End: Complemental strand, 17653844 - 17653712
Alignment:
Q  70 aatactaccttcgatcatatttataaaaagaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatc 169  Q
    |||||||||| || || ||||||||| | |||  |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |    
T  17653844 aatactacctccggtcctatttataaga-gaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 17653746  T
Q  170 taactttctcttataaataggaccggagggagta 203  Q
    ||| ||||||||||||||||||||||||||||||    
T  17653745 taaatttctcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 203
Target Start/End: Complemental strand, 37509052 - 37508921
Alignment:
Q  71 atactaccttcgatcatatttataaaaagaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatct 170  Q
    ||||||||| || || ||||||||| | |||  |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | ||    
T  37509052 atactacctccggtcctatttataaga-gaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 37508954  T
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    || ||||||||||||||||||||||||||||||    
T  37508953 aaatttctcttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 36095711 - 36095810
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||| ||||||||||||||||||||||||||    
T  36095711 ttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttatcttataaataggaccggagggagta 36095810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 208
Target Start/End: Complemental strand, 38964486 - 38964387
Alignment:
Q  109 tcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaatatt 208  Q
    ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || |||||| ||||||||||||||||||||||||| |||| ||||    
T  38964486 tcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagtattatt 38964387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 203
Target Start/End: Complemental strand, 8437519 - 8437425
Alignment:
Q  109 tcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||| || ||||||||  || || |||||||| | ||||||  ||||||||| | |||| ||||||||||||||||||||||||| ||||    
T  8437519 tcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagta 8437425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 203
Target Start/End: Original strand, 21295362 - 21295456
Alignment:
Q  109 tcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||| || |||||||| ||| || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  21295362 tcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 21295456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 203
Target Start/End: Original strand, 26019489 - 26019609
Alignment:
Q  81 cgatcatatttataaaaagaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctct 180  Q
    ||||| ||||||||| | ||||||| | ||||| ||| |||||||||||| ||||| ||| |||| |||||||| ||| ||| |||| | ||||||||||    
T  26019489 cgatcctatttataaga-gaaaatttggtcaaccaaagtttatgtatctggttcaaaatttagtcaagatacattaac-tttgttaacccaactttctct 26019586  T
Q  181 tataaataggaccggagggagta 203  Q
    ||||||||| || ||||| ||||    
T  26019587 tataaatagaactggaggaagta 26019609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 203
Target Start/End: Original strand, 33942941 - 33943062
Alignment:
Q  81 cgatcatatttataaaaagaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctct 180  Q
    ||||| ||||||||| | |||| |||| ||||||||| || ||||||||  || || |||||||| | |||||| ||||||| || | |||||||||| |    
T  33942941 cgatcctatttataaga-gaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttt 33943039  T
Q  181 tataaataggaccggagggagta 203  Q
    ||||||||||| |||| ||||||    
T  33943040 tataaataggatcggaaggagta 33943062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 203
Target Start/End: Complemental strand, 46208124 - 46208030
Alignment:
Q  109 tcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||||||||    
T  46208124 tcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 46208030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 21295383 - 21295326
Alignment:
Q  146 tagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||||||| || | ||||  |||||||||||||||||||||||||||||    
T  21295383 tagatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 21295326  T

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Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 197
Target Start/End: Original strand, 40691027 - 40691120
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggag 197  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| |||| |||| ||||||||||||||||||||||||    
T  40691027 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttaacctaaatttctcttataaataggaccggag 40691120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 46208103 - 46208160
Alignment:
Q  146 tagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||||||| || | ||||  |||||||||||||||||||||||||||||    
T  46208103 tagatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 46208160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 48340469 - 48340529
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaat 205  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||||    
T  48340469 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 48340529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 208
Target Start/End: Complemental strand, 4238688 - 4238589
Alignment:
Q  109 tcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaatatt 208  Q
    ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| |||| ||||    
T  4238688 tcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatt 4238589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 9027197 - 9027142
Alignment:
Q  148 gatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||||| || | | |||||| ||||||||||||||||||||||||||    
T  9027197 gatacatcaacttttgttgacccaactttatcttataaataggaccggagggagta 9027142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 10298078 - 10297979
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  10298078 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 19557083 - 19557182
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  19557083 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 19557182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 22722030 - 22721931
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  22722030 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 22721931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 34080061 - 34080160
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  34080061 ttgggtcaacaaaagttgatgtatcttgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 34080160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 42507386 - 42507485
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  ||||| |||||||| | ||||||  |||||| || | |||| ||||| ||||||||||||||||||| ||||    
T  42507386 ttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctattataaataggaccggaggtagta 42507485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 44785427 - 44785526
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  44785427 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44785526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 49823412 - 49823511
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  49823412 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 49823511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 51406772 - 51406673
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| |||||||||||| ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||| ||||||||| ||||    
T  51406772 ttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 10298051 - 10298109
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  10298051 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 10298109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 19557110 - 19557052
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  19557110 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 38964464 - 38964522
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  38964464 ctagatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 40691054 - 40690996
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  40691054 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 40690996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 49823439 - 49823381
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  49823439 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49823381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 6013364 - 6013331
Alignment:
Q  175 ttctcttataaataggaccggagggagtaatatt 208  Q
    ||||||||||||||||||||||||||||||||||    
T  6013364 ttctcttataaataggaccggagggagtaatatt 6013331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 35513603 - 35513471
Alignment:
Q  72 tactaccttcgatcatatttataaaaagaaaattggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatcta 171  Q
    |||| ||| ||||| ||||||||||| |||   |||||||| ||||  | ||||||||  || || |||||||| | ||||||  |||||| || | |||    
T  35513603 tactccctccgatcctatttataaaa-gaattctggatcaataaaaggtgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 35513505  T
Q  172 actttctcttataaataggaccggagggagtaat 205  Q
    | ||||||||||||||||||||| ||||||||||    
T  35513504 aatttctcttataaataggaccgaagggagtaat 35513471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 42507413 - 42507352
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaata 206  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||| |||||    
T  42507413 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggaataata 42507352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 205
Target Start/End: Complemental strand, 8092682 - 8092586
Alignment:
Q  109 tcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaat 205  Q
    |||||| || || ||||||||| || || ||| |||| |||||||||||||||  || ||  || ||||||||||||||||||||||| || |||||    
T  8092682 tcaacagaagttgatgtatctggttaaaaatttagtcgagatacatcaactttagttgattcaattttctcttataaataggaccggatggggtaat 8092586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 34080086 - 34080030
Alignment:
Q  147 agatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  34080086 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 8817444 - 8817381
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaatatt 208  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||| |||||| ||||    
T  8817444 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggaaggagtattatt 8817381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 8817417 - 8817516
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||| ||| ||||    
T  8817417 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagta 8817516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 9111552 - 9111497
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggaggga 200  Q
    |||||||||||||||||| || | | ||  ||||||||||||||||||||||||||    
T  9111552 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 9111497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 42170377 - 42170476
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||| || || ||||| || | ||||||  |||||| || | |||| ||||||||||||||| ||||||||| ||||    
T  42170377 ttgggtcaacaaaagttgatgtatctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 42170476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 48340496 - 48340397
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| |||||||| |||||||||||||||| ||||    
T  48340496 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttgtaaataggaccggaggtagta 48340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 2787890 - 2787832
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||||||||  | | | ||  |||||||||||||||||||||||||||||    
T  2787890 ctagatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagta 2787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 4238666 - 4238724
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||| ||||    
T  4238666 ctagatacatcaacttttgttgaccaaaaattctcttataaataggaccggaggtagta 4238724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 8437497 - 8437555
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || |   ||  |||||||||||||||||||||||||||||    
T  8437497 ctagatacatcaacttttgttgactcaaaattctcttataaataggaccggagggagta 8437555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 17653784 - 17653842
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||| ||||    
T  17653784 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 17653842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 21653372 - 21653338
Alignment:
Q  174 tttctcttataaataggaccggagggagtaatatt 208  Q
    |||||||| ||||||||||||||||||||||||||    
T  21653372 tttctcttgtaaataggaccggagggagtaatatt 21653338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 22722003 - 22722061
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||| ||||||    
T  22722003 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggatggagta 22722061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 37508993 - 37509051
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||| ||||    
T  37508993 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 37509051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 51406745 - 51406803
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||| |||| || | | ||  |||||||||||||||||||||||||||||    
T  51406745 ctagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 51406803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 197
Target Start/End: Original strand, 2787863 - 2787956
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggag 197  Q
    |||| ||| ||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||    
T  2787863 ttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 2787956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 42299630 - 42299695
Alignment:
Q  138 attcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||| |||||||||||  | |||| || ||| |||||||||||||||||| || |||||||||||    
T  42299630 attcattctagatacattgagttttgttgatccaactttctcttataaatacgatcggagggagta 42299695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 379190 - 379222
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||||||||||| ||||||    
T  379190 aactttctcttataaataggaccggaaggagta 379222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 21662917 - 21662885
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    |||||| ||||||||||||||||||||||||||    
T  21662917 aactttttcttataaataggaccggagggagta 21662885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 25113380 - 25113348
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||||||||||||| ||||    
T  25113380 aactttctcttataaataggaccggaggaagta 25113348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 40214931 - 40214899
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    ||||||||||| |||||||||||||||||||||    
T  40214931 aactttctcttgtaaataggaccggagggagta 40214899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 40464639 - 40464671
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    |||||| ||||||||||||||||||||||||||    
T  40464639 aactttatcttataaataggaccggagggagta 40464671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 51516989 - 51516957
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    |||||| ||||||||||||||||||||||||||    
T  51516989 aactttttcttataaataggaccggagggagta 51516957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 51698145 - 51698113
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    ||||||||||| |||||||||||||||||||||    
T  51698145 aactttctcttgtaaataggaccggagggagta 51698113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 53442024 - 53442056
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    |||||| ||||||||||||||||||||||||||    
T  53442024 aactttttcttataaataggaccggagggagta 53442056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 203
Target Start/End: Original strand, 231362 - 231433
Alignment:
Q  132 ttcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||| |||||||| |||||||| ||||||| || ||| ||||||||||||||| ||||| |||||||||||    
T  231362 ttcaaaattcagtccagatacataaacttttgttgatccaactttctcttataattaggatcggagggagta 231433  T

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Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 206
Target Start/End: Complemental strand, 26602422 - 26602320
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  26602422 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 26602323  T
Q  204 ata 206  Q
    |||    
T  26602322 ata 26602320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 2830434 - 2830335
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  2830434 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 2830335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 6330214 - 6330115
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  6330214 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 8383000 - 8383099
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  8383000 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 8383099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 11572176 - 11572275
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  11572176 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 11572275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 35031032 - 35031131
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| |||||||||||| ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||| ||||||||||||||||||||| ||||    
T  35031032 ttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagta 35031131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 2830407 - 2830465
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  2830407 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 6330187 - 6330245
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  6330187 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6330245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 8099602 - 8099660
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  8099602 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 8099660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 8383027 - 8382969
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  8383027 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 9644768 - 9644826
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  9644768 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9644826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 9650785 - 9650843
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  9650785 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9650843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 11572203 - 11572145
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  11572203 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 11572145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 13853651 - 13853593
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  13853651 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13853593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 26602395 - 26602453
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||||||||||||    
T  26602395 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 26602453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 33052852 - 33052794
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||||||||||| | | ||  |||||||||||||||||||||| ||||||    
T  33052852 ctagatacatcaacttttattgacccaaaattctcttataaataggaccggatggagta 33052794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 213
Target Start/End: Complemental strand, 9644795 - 9644686
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  | || | || | |||| ||||||||||||||||||||||||| ||||    
T  9644795 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 9644696  T
Q  204 atattcttta 213  Q
    ||||| ||||    
T  9644695 atatttttta 9644686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 213
Target Start/End: Complemental strand, 9650812 - 9650703
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  | || | || | |||| ||||||||||||||||||||||||| ||||    
T  9650812 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 9650713  T
Q  204 atattcttta 213  Q
    ||||| ||||    
T  9650712 atatttttta 9650703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 8186441 - 8186497
Alignment:
Q  147 agatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||| || ||| || ||||| |||||||||||||||| |||||||    
T  8186441 agatacatcaacttttgttgatccaaatttcttttataaataggaccggggggagta 8186497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 208
Target Start/End: Original strand, 13853624 - 13853728
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||| ||| ||||    
T  13853624 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagta 13853723  T
Q  204 atatt 208  Q
     ||||    
T  13853724 ttatt 13853728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 8099629 - 8099530
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || ||||| || | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  8099629 ttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 8099530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 8417851 - 8417792
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaa 204  Q
    |||||||||||||||||| || | | ||  |||||||||||||||||||| |||||||||    
T  8417851 ctagatacatcaacttttgttgacccaaaattctcttataaataggaccgaagggagtaa 8417792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 28747165 - 28747248
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaat 187  Q
    |||| ||||||||| || |||||||| ||| || |||||||| | ||||||  |||||| || |||||| ||||||||||||||    
T  28747165 ttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaat 28747248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 33052825 - 33052924
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| |||| |||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  33052825 ttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 33052924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 3788113 - 3788167
Alignment:
Q  149 atacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||| || | |||| ||| ||||||||||| ||||||||||||||    
T  3788113 atacatcaacttttgttgacctaaatttatcttataaataagaccggagggagta 3788167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 203
Target Start/End: Complemental strand, 6068660 - 6068566
Alignment:
Q  109 tcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||| || ||||||||  || || ||||| || | ||||||  ||||||||| | |||| ||| ||||||||||||||||||||| ||||    
T  6068660 tcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaaatttttcttataaataggaccggaggtagta 6068566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 6068638 - 6068696
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||| || |   ||  |||||||||||||||||||||||||||||    
T  6068638 ctagatacatcaacttttgttgactcaaaattctcttataaataggaccggagggagta 6068696  T

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Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 213
Target Start/End: Original strand, 8417824 - 8417933
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || ||||| || | ||||||  |||||| || | |||| ||||||||||||||| |||| |||||||||    
T  8417824 ttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataagaccagagggagta 8417923  T
Q  204 atattcttta 213  Q
     |||| ||||    
T  8417924 ttattattta 8417933  T

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Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 203
Target Start/End: Original strand, 33859606 - 33859639
Alignment:
Q  170 taactttctcttataaataggaccggagggagta 203  Q
    |||||||||||| |||||||||||||||||||||    
T  33859606 taactttctcttgtaaataggaccggagggagta 33859639  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 6045712 - 6045680
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||||||||||||||||| |||||    
T  6045712 aactttctcttataaataggaccggagagagta 6045680  T

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Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 203
Target Start/End: Complemental strand, 22896499 - 22896471
Alignment:
Q  175 ttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||||||||||||||    
T  22896499 ttctcttataaataggaccggagggagta 22896471  T

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Target: scaffold0464 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 6162 - 6261
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  6162 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccacatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6261  T

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Target: scaffold0464; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 6189 - 6126
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaatatt 208  Q
    |||||||||||||||||| || | | ||  || |||||||||||||||||||||||||| ||||    
T  6189 ctagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtattatt 6126  T

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Target: scaffold0204 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 23884 - 23785
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  23884 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 23785  T

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Target: scaffold0204; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 23857 - 23920
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagtaatatt 208  Q
    |||||||||||||||||| || | | ||  || |||||||||||||||||||||||||| ||||    
T  23857 ctagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtattatt 23920  T

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Target: scaffold1707 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 196
Target Start/End: Complemental strand, 1434 - 1342
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccgga 196  Q
    |||| ||||||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| |||||||||||||||||||||||    
T  1434 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgga 1342  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 77376 - 77344
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||||||||||||||||||    
T  77376 aactttctcttataaataggaccggagggagta 77344  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 492336 - 492304
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    |||||||||||||||||||||||||||||||||    
T  492336 aactttctcttataaataggaccggagggagta 492304  T

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Target: scaffold0482 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 12959 - 12860
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||| ||||| || ||||||||  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  12959 ttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 12860  T

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Target: scaffold0482; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 12932 - 12990
Alignment:
Q  145 ctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    ||||||||||||||||||  | | | ||  |||||||||||||||||||||||||||||    
T  12932 ctagatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagta 12990  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 49604 - 49505
Alignment:
Q  104 ttggatcaacaaaaatttatgtatctgattcaagattcagtctagatacatcaacttttattaatctaactttctcttataaataggaccggagggagta 203  Q
    |||| ||||||||| || |||||| |  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  49604 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 49505  T

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Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 49581 - 49636
Alignment:
Q  149 atacatcaacttttattaatctaactttctcttataaataggaccggagggagtaa 204  Q
    |||||||||||||| || | | ||  ||||||||||||||||||||||||||||||    
T  49581 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaa 49636  T

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Target: scaffold0415 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 207
Target Start/End: Complemental strand, 13757 - 13727
Alignment:
Q  177 ctcttataaataggaccggagggagtaatat 207  Q
    |||||||||||||||||||||||||||||||    
T  13757 ctcttataaataggaccggagggagtaatat 13727  T

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Target: scaffold0221 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 11147 - 11179
Alignment:
Q  171 aactttctcttataaataggaccggagggagta 203  Q
    ||||||||||| |||||||||||||||||||||    
T  11147 aactttctcttgtaaataggaccggagggagta 11179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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