View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0599_high_8 (Length: 656)

Name: NF0599_high_8
Description: NF0599
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0599_high_8
NF0599_high_8
[»] chr7 (34 HSPs)
chr7 (113-240)||(1478654-1478781)
chr7 (277-317)||(6822555-6822595)
chr7 (278-319)||(42584801-42584842)
chr7 (277-317)||(9055265-9055305)
chr7 (278-318)||(13437197-13437237)
chr7 (279-319)||(34108886-34108926)
chr7 (275-319)||(39497333-39497377)
chr7 (279-319)||(41430183-41430223)
chr7 (274-314)||(41590556-41590596)
chr7 (275-319)||(46829475-46829519)
chr7 (276-315)||(16953921-16953960)
chr7 (277-319)||(9363385-9363427)
chr7 (277-319)||(12007217-12007259)
chr7 (269-319)||(25192916-25192965)
chr7 (275-317)||(28824499-28824541)
chr7 (279-317)||(33212042-33212080)
chr7 (275-317)||(42671009-42671051)
chr7 (277-319)||(47448824-47448866)
chr7 (280-317)||(2756962-2756999)
chr7 (276-317)||(24700118-24700159)
chr7 (276-317)||(33684677-33684718)
chr7 (276-317)||(37392040-37392081)
chr7 (278-319)||(47954133-47954174)
chr7 (277-317)||(4971288-4971328)
chr7 (277-317)||(4971432-4971472)
chr7 (275-319)||(23910282-23910326)
chr7 (279-319)||(33050183-33050223)
chr7 (277-317)||(35823008-35823048)
chr7 (279-319)||(36352618-36352658)
chr7 (279-319)||(40854686-40854726)
chr7 (274-314)||(41590119-41590159)
chr7 (277-317)||(42276089-42276129)
chr7 (279-319)||(43159606-43159646)
chr7 (276-312)||(43213316-43213352)
[»] chr8 (46 HSPs)
chr8 (275-319)||(67192-67236)
chr8 (279-319)||(25830277-25830317)
chr8 (277-317)||(35818935-35818975)
chr8 (275-319)||(43285994-43286038)
chr8 (277-319)||(33100500-33100542)
chr8 (277-318)||(1248251-1248292)
chr8 (277-318)||(7376504-7376545)
chr8 (276-313)||(40719680-40719717)
chr8 (278-319)||(42620008-42620049)
chr8 (275-319)||(5771907-5771951)
chr8 (275-319)||(5772003-5772047)
chr8 (279-319)||(10644833-10644873)
chr8 (277-317)||(12959936-12959976)
chr8 (275-319)||(13970915-13970959)
chr8 (277-317)||(16808579-16808619)
chr8 (277-317)||(37033134-37033174)
chr8 (272-319)||(5601018-5601065)
chr8 (272-319)||(5639555-5639602)
chr8 (278-317)||(9048349-9048388)
chr8 (279-318)||(34018808-34018847)
chr8 (276-319)||(35067157-35067200)
chr8 (279-318)||(35937544-35937583)
chr8 (277-319)||(12655920-12655962)
chr8 (279-317)||(22767132-22767170)
chr8 (279-317)||(31806299-31806337)
chr8 (275-317)||(41955925-41955967)
chr8 (277-319)||(43715873-43715914)
chr8 (277-318)||(3155841-3155882)
chr8 (277-318)||(11584094-11584135)
chr8 (275-316)||(29107991-29108032)
chr8 (277-318)||(43066626-43066667)
chr8 (277-318)||(45253640-45253681)
chr8 (275-319)||(1068602-1068646)
chr8 (278-318)||(1158367-1158407)
chr8 (277-317)||(6849147-6849187)
chr8 (279-319)||(7598708-7598748)
chr8 (275-319)||(10839513-10839557)
chr8 (275-319)||(20288529-20288573)
chr8 (275-319)||(21075158-21075202)
chr8 (279-319)||(21526312-21526352)
chr8 (279-319)||(23754738-23754778)
chr8 (279-319)||(25987818-25987858)
chr8 (279-319)||(26026896-26026936)
chr8 (94-134)||(27259550-27259590)
chr8 (277-317)||(41639821-41639861)
chr8 (279-319)||(42786691-42786731)
[»] chr5 (31 HSPs)
chr5 (578-637)||(38310446-38310505)
chr5 (279-319)||(22098255-22098295)
chr5 (277-317)||(22647594-22647634)
chr5 (281-319)||(14321986-14322024)
chr5 (275-317)||(33393630-33393672)
chr5 (278-319)||(1293117-1293158)
chr5 (276-317)||(18638858-18638899)
chr5 (278-319)||(18695317-18695358)
chr5 (278-318)||(844035-844075)
chr5 (275-319)||(6758822-6758866)
chr5 (276-319)||(24468317-24468360)
chr5 (277-319)||(13089813-13089855)
chr5 (277-319)||(14011315-14011357)
chr5 (269-303)||(14647552-14647586)
chr5 (279-317)||(31708370-31708408)
chr5 (279-317)||(32873182-32873220)
chr5 (279-317)||(36416095-36416133)
chr5 (278-319)||(4088442-4088483)
chr5 (278-319)||(9168196-9168237)
chr5 (275-316)||(14206396-14206437)
chr5 (277-318)||(14914370-14914411)
chr5 (274-319)||(27487882-27487927)
chr5 (280-317)||(31329159-31329196)
chr5 (278-318)||(2050926-2050966)
chr5 (269-305)||(4434472-4434508)
chr5 (275-319)||(12891127-12891171)
chr5 (279-319)||(16594407-16594447)
chr5 (279-319)||(16690499-16690539)
chr5 (277-317)||(19376165-19376205)
chr5 (279-319)||(21155987-21156027)
chr5 (275-319)||(39032635-39032679)
[»] chr3 (50 HSPs)
chr3 (276-319)||(37894274-37894317)
chr3 (277-317)||(11335335-11335375)
chr3 (277-317)||(32008031-32008071)
chr3 (279-319)||(48944741-48944781)
chr3 (270-317)||(36907039-36907086)
chr3 (278-317)||(51032657-51032696)
chr3 (276-317)||(40159871-40159912)
chr3 (278-319)||(48287670-48287711)
chr3 (278-319)||(49761217-49761258)
chr3 (279-319)||(29573387-29573427)
chr3 (279-319)||(52963347-52963387)
chr3 (276-319)||(45186583-45186626)
chr3 (276-318)||(7246-7288)
chr3 (277-319)||(26550235-26550277)
chr3 (276-318)||(27162501-27162543)
chr3 (279-317)||(31017427-31017465)
chr3 (275-317)||(33976427-33976469)
chr3 (275-317)||(38359339-38359381)
chr3 (275-317)||(47988518-47988560)
chr3 (275-317)||(47997805-47997847)
chr3 (275-317)||(48007092-48007134)
chr3 (277-319)||(48405408-48405450)
chr3 (277-319)||(54099388-54099430)
chr3 (278-319)||(10811134-10811175)
chr3 (268-301)||(12792627-12792660)
chr3 (278-319)||(19150350-19150391)
chr3 (276-317)||(22813069-22813110)
chr3 (277-318)||(23377980-23378021)
chr3 (276-317)||(26279881-26279922)
chr3 (264-317)||(34628103-34628156)
chr3 (279-320)||(45054974-45055015)
chr3 (276-317)||(50745366-50745407)
chr3 (276-317)||(51410803-51410844)
chr3 (276-317)||(54134849-54134890)
chr3 (276-316)||(8254024-8254064)
chr3 (279-319)||(11327108-11327148)
chr3 (279-319)||(14207289-14207329)
chr3 (279-319)||(14215037-14215077)
chr3 (276-316)||(21579111-21579151)
chr3 (278-318)||(41448208-41448248)
chr3 (277-317)||(43169775-43169815)
chr3 (279-319)||(44813477-44813517)
chr3 (275-319)||(44963850-44963894)
chr3 (276-316)||(45150150-45150190)
chr3 (279-319)||(48352996-48353036)
chr3 (276-316)||(49196693-49196733)
chr3 (275-319)||(50559243-50559287)
chr3 (278-318)||(50652387-50652427)
chr3 (279-319)||(52714733-52714773)
chr3 (279-319)||(54233499-54233539)
[»] chr2 (34 HSPs)
chr2 (276-319)||(6336249-6336292)
chr2 (277-317)||(3585624-3585664)
chr2 (279-317)||(11980651-11980689)
chr2 (279-317)||(31635843-31635881)
chr2 (277-318)||(5031921-5031962)
chr2 (277-318)||(39737718-39737759)
chr2 (277-317)||(1052529-1052569)
chr2 (277-317)||(14797683-14797723)
chr2 (279-318)||(40874293-40874332)
chr2 (279-317)||(6639505-6639543)
chr2 (275-317)||(7438564-7438606)
chr2 (277-319)||(24766150-24766192)
chr2 (277-319)||(38821364-38821406)
chr2 (277-319)||(43658741-43658783)
chr2 (276-317)||(7498024-7498065)
chr2 (276-317)||(13466108-13466149)
chr2 (278-319)||(14328380-14328421)
chr2 (277-318)||(29168723-29168764)
chr2 (278-319)||(41042253-41042293)
chr2 (278-319)||(43057063-43057104)
chr2 (278-319)||(44484687-44484728)
chr2 (277-317)||(3299138-3299178)
chr2 (277-317)||(4723564-4723604)
chr2 (277-317)||(6666018-6666058)
chr2 (278-318)||(14871639-14871679)
chr2 (277-305)||(20534096-20534124)
chr2 (279-319)||(21738647-21738687)
chr2 (276-316)||(28165275-28165315)
chr2 (279-319)||(35334520-35334560)
chr2 (274-318)||(36774533-36774577)
chr2 (278-318)||(36909875-36909915)
chr2 (275-319)||(37731231-37731275)
chr2 (274-318)||(42141626-42141670)
chr2 (278-318)||(44996544-44996584)
[»] chr4 (47 HSPs)
chr4 (275-317)||(22920304-22920346)
chr4 (275-317)||(22971453-22971495)
chr4 (276-317)||(1562569-1562610)
chr4 (278-319)||(32696820-32696861)
chr4 (274-317)||(33820369-33820412)
chr4 (275-318)||(43358609-43358652)
chr4 (279-317)||(3968885-3968923)
chr4 (278-319)||(15522353-15522394)
chr4 (277-318)||(20118779-20118820)
chr4 (276-317)||(55595946-55595987)
chr4 (278-318)||(2004221-2004261)
chr4 (277-317)||(11546935-11546975)
chr4 (277-317)||(12241056-12241096)
chr4 (275-319)||(47288078-47288122)
chr4 (274-317)||(7146153-7146196)
chr4 (279-318)||(8810571-8810610)
chr4 (276-319)||(34995317-34995360)
chr4 (279-318)||(35824138-35824177)
chr4 (279-318)||(36812435-36812474)
chr4 (276-319)||(37514163-37514206)
chr4 (278-317)||(40755920-40755959)
chr4 (273-316)||(42510807-42510850)
chr4 (276-319)||(42815401-42815444)
chr4 (278-317)||(47998593-47998632)
chr4 (279-317)||(25725727-25725765)
chr4 (279-317)||(29407059-29407097)
chr4 (278-316)||(32621637-32621675)
chr4 (279-313)||(33776850-33776884)
chr4 (279-317)||(39881063-39881101)
chr4 (275-317)||(49424853-49424895)
chr4 (277-319)||(51255744-51255786)
chr4 (278-320)||(51359820-51359862)
chr4 (278-320)||(53463100-53463142)
chr4 (275-317)||(53583161-53583203)
chr4 (272-317)||(33278668-33278713)
chr4 (274-319)||(41609710-41609755)
chr4 (282-319)||(42916653-42916690)
chr4 (274-319)||(44257761-44257806)
chr4 (270-319)||(56557724-56557773)
chr4 (279-319)||(1796013-1796053)
chr4 (279-319)||(3078939-3078979)
chr4 (279-319)||(3475869-3475909)
chr4 (276-316)||(23220482-23220522)
chr4 (278-318)||(24088596-24088636)
chr4 (279-319)||(31469020-31469060)
chr4 (275-319)||(43174980-43175023)
chr4 (269-305)||(43434337-43434373)
[»] chr1 (44 HSPs)
chr1 (278-319)||(12999853-12999894)
chr1 (278-317)||(18541084-18541123)
chr1 (275-317)||(12708086-12708128)
chr1 (275-317)||(12713540-12713582)
chr1 (275-317)||(12717631-12717673)
chr1 (277-319)||(21433432-21433474)
chr1 (279-317)||(33076119-33076157)
chr1 (279-319)||(49020435-49020475)
chr1 (278-317)||(25989017-25989056)
chr1 (278-317)||(27810280-27810319)
chr1 (273-316)||(47059913-47059956)
chr1 (276-319)||(48983699-48983742)
chr1 (277-319)||(740987-741029)
chr1 (279-317)||(3606127-3606165)
chr1 (277-319)||(11947793-11947835)
chr1 (275-317)||(15182616-15182658)
chr1 (277-319)||(30973550-30973592)
chr1 (274-316)||(43612103-43612145)
chr1 (278-316)||(47386828-47386866)
chr1 (273-319)||(48858817-48858863)
chr1 (279-317)||(51168656-51168694)
chr1 (275-317)||(51848876-51848918)
chr1 (278-319)||(9566992-9567033)
chr1 (275-320)||(29706733-29706778)
chr1 (281-314)||(29877299-29877332)
chr1 (280-317)||(32939171-32939208)
chr1 (274-307)||(35848407-35848440)
chr1 (275-316)||(42256456-42256497)
chr1 (276-317)||(52233254-52233295)
chr1 (279-319)||(649768-649808)
chr1 (277-317)||(1615034-1615074)
chr1 (275-319)||(4213068-4213112)
chr1 (276-316)||(9011642-9011682)
chr1 (275-319)||(9987947-9987991)
chr1 (279-319)||(19947772-19947812)
chr1 (278-318)||(26501294-26501334)
chr1 (275-319)||(27742613-27742657)
chr1 (276-316)||(40596077-40596117)
chr1 (277-317)||(44672063-44672103)
chr1 (277-317)||(45042259-45042299)
chr1 (279-319)||(49569996-49570036)
chr1 (279-319)||(49931553-49931593)
chr1 (275-319)||(52362478-52362522)
chr1 (279-319)||(52714932-52714972)
[»] chr6 (21 HSPs)
chr6 (276-319)||(25127864-25127907)
chr6 (275-317)||(32729885-32729927)
chr6 (279-319)||(1376364-1376404)
chr6 (279-319)||(1384112-1384152)
chr6 (277-317)||(8778905-8778945)
chr6 (277-317)||(9188977-9189017)
chr6 (276-320)||(15368853-15368897)
chr6 (277-317)||(15666806-15666846)
chr6 (275-319)||(17551410-17551454)
chr6 (277-317)||(26391318-26391358)
chr6 (276-319)||(3339530-3339573)
chr6 (277-316)||(16328724-16328763)
chr6 (279-317)||(17835612-17835650)
chr6 (282-319)||(3552185-3552222)
chr6 (277-317)||(3049563-3049603)
chr6 (276-320)||(15318218-15318262)
chr6 (277-317)||(19789109-19789149)
chr6 (275-319)||(27334854-27334898)
chr6 (275-319)||(27395594-27395638)
chr6 (277-317)||(28965873-28965913)
chr6 (277-317)||(29383555-29383595)
[»] scaffold0003 (2 HSPs)
scaffold0003 (278-318)||(337117-337157)
scaffold0003 (279-319)||(366294-366333)
[»] scaffold0184 (1 HSPs)
scaffold0184 (279-317)||(16627-16665)
[»] scaffold0078 (1 HSPs)
scaffold0078 (279-317)||(56179-56217)
[»] scaffold0049 (1 HSPs)
scaffold0049 (279-317)||(72202-72240)
[»] scaffold0016 (2 HSPs)
scaffold0016 (94-132)||(44372-44410)
scaffold0016 (275-319)||(204476-204520)
[»] scaffold0432 (1 HSPs)
scaffold0432 (278-319)||(6551-6592)
[»] scaffold0241 (1 HSPs)
scaffold0241 (276-316)||(5375-5415)
[»] scaffold0085 (1 HSPs)
scaffold0085 (282-318)||(31330-31366)
[»] scaffold0024 (2 HSPs)
scaffold0024 (277-317)||(60467-60507)
scaffold0024 (277-317)||(91946-91986)
[»] scaffold0019 (1 HSPs)
scaffold0019 (278-318)||(72365-72405)


Alignment Details
Target: chr7 (Bit Score: 84; Significance: 1e-39; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 113 - 240
Target Start/End: Complemental strand, 1478781 - 1478654
Alignment:
Q  113 acctgaaaaagtacagaagcttcaaacttgacttccatatggttaatttcacaacctgtatataagaggaaaaacagaacaaatattataaatcctacac 212  Q
    ||||||||||||| ||||||||||||||||||  ||| |||| ||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  1478781 acctgaaaaagtagagaagcttcaaacttgacaaccaaatggataatttcacaacctgtaaataagaggaaaaacacaacaaatattataagtcctacac 1478682  T
Q  213 cttcattcagacacttttacaaacacct 240  Q
     |||||||||||| | ||||||||||||    
T  1478681 attcattcagacaatcttacaaacacct 1478654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 6822595 - 6822555
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  6822595 aagagaaatgatatttgtacaaccattttctaacaactttt 6822555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 278 - 319
Target Start/End: Original strand, 42584801 - 42584842
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  42584801 agagaaatgatatatgtacaaccattttctaacaacttttgt 42584842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 9055265 - 9055305
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  9055265 aagagaaatgatatttgtacaaccaatttctaacaactttt 9055305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 278 - 318
Target Start/End: Original strand, 13437197 - 13437237
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  13437197 agagaaatgatatttgcacaaccattttgtgacaacttttg 13437237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 34108926 - 34108886
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  34108926 gagaaatgatatatgtacaaccattttctaacaacttttgt 34108886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 39497377 - 39497333
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| ||||||||||| ||||||| |||||    
T  39497377 aaaagagaaatgatatttgtacaaccattttttaacaacctttgt 39497333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 41430223 - 41430183
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  41430223 gagaaatgatatatggacaaccattttctaacaacttttgt 41430183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 41590596 - 41590556
Alignment:
Q  274 caaaagagaaatgatatttgcacaaccattttctaacaact 314  Q
    |||||||||||||||||||| ||||||||||| ||||||||    
T  41590596 caaaagagaaatgatatttgtacaaccattttataacaact 41590556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 46829475 - 46829519
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| ||||||||||| |||||| ||||||    
T  46829475 aaaagagaaatgatatttgtacaaccattttgtaacaatttttgt 46829519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 16953921 - 16953960
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaactt 315  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  16953921 aaagaaaaatgatatttacacaaccattttctaacaactt 16953960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 319
Target Start/End: Original strand, 9363385 - 9363427
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||| |||| |||||| |||||||||||||    
T  9363385 aagagaaatgatatttgtacaatcattttataacaacttttgt 9363427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 319
Target Start/End: Complemental strand, 12007259 - 12007217
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||| ||||||||||| | |||||||||||    
T  12007259 aagagaaatgatatttgaacaaccattttttgacaacttttgt 12007217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 269 - 319
Target Start/End: Complemental strand, 25192965 - 25192916
Alignment:
Q  269 atttacaaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||| ||||||||||||||||||| ||||||||||| | |||||||||||    
T  25192965 atttaaaaaagagaaatgatatttgaacaaccatttt-ttacaacttttgt 25192916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 317
Target Start/End: Original strand, 28824499 - 28824541
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||    
T  28824499 aaaagagaaatgatatttgtacaaccactttctgacaactttt 28824541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 317
Target Start/End: Original strand, 33212042 - 33212080
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  33212042 gagaaatgatatttgtacaaccattttctaacaattttt 33212080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 317
Target Start/End: Original strand, 42671009 - 42671051
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||||| | ||||||||| |||||||||||    
T  42671009 aaaagagaaatgatatttgaagaaccattttttaacaactttt 42671051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 319
Target Start/End: Original strand, 47448824 - 47448866
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||| ||||||||||| | |||||||||||    
T  47448824 aagagaaatgatatttgaacaaccattttttgacaacttttgt 47448866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 317
Target Start/End: Complemental strand, 2756999 - 2756962
Alignment:
Q  280 agaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  2756999 agaaatgatatttgtacaaccaatttctaacaactttt 2756962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 24700118 - 24700159
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||||| |||| |||||| |||||||||||    
T  24700118 aaagagaaatgatatttgtacaatcattttgtaacaactttt 24700159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 33684677 - 33684718
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||||| ||||||| ||||| |||||||||    
T  33684677 aaagagaaatgatatttgtacaaccactttctcacaactttt 33684718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 37392040 - 37392081
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||||| ||||||||||| | |||||||||    
T  37392040 aaagagaaatgatatttgtacaaccattttttgacaactttt 37392081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 47954174 - 47954133
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||| | ||||||||||| ||||||||||||||||||||    
T  47954174 agagaaacggtatttgcacaatcattttctaacaacttttgt 47954133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 4971288 - 4971328
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| ||||||||||| | |||||||||    
T  4971288 aagagaaatgatatttgtacaaccattttgtgacaactttt 4971328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 4971472 - 4971432
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||| ||||||||||| |||||||||| ||||||||||||    
T  4971472 aagagcaatgatatttgaacaaccatttgctaacaactttt 4971432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 23910326 - 23910282
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||| |||||||||||||| ||||||||||| | |||||||||||    
T  23910326 aaaatagaaatgatatttgtacaaccattttttgacaacttttgt 23910282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 33050183 - 33050223
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  33050183 gagaaatgatatttgtacaaccattttgtgacaacttttgt 33050223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 35823048 - 35823008
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| ||| |||||||||||||| ||||    
T  35823048 aagagaaatgatatttgtacatccattttctaacaattttt 35823008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 36352658 - 36352618
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||| || ||||||||||| |||||||||||||    
T  36352658 gagaaatgatatatgtacaaccattttgtaacaacttttgt 36352618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 40854726 - 40854686
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||| || ||| |||||||||||||||||||||    
T  40854726 gagaaatgatatctgtacatccattttctaacaacttttgt 40854686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 41590159 - 41590119
Alignment:
Q  274 caaaagagaaatgatatttgcacaaccattttctaacaact 314  Q
    |||||||||| ||||||||| ||||||||||| ||||||||    
T  41590159 caaaagagaagtgatatttgtacaaccattttataacaact 41590119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 42276089 - 42276129
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| ||||| |||||||||||| ||||    
T  42276089 aagagaaatgatatttgtacaactattttctaacaattttt 42276129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 43159646 - 43159606
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||||||||| |||||| ||||||    
T  43159646 gagaaatgatatttgaacaaccattttttaacaatttttgt 43159606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 276 - 312
Target Start/End: Original strand, 43213316 - 43213352
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaa 312  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  43213316 aaagagaaatgatatttgtacaaccactttctaacaa 43213352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 67236 - 67192
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  67236 aaaagagaaatgatatttgtacaaccattttctaacaacttttgt 67192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 25830317 - 25830277
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  25830317 gagaaatgatatttgtacaaccattttctaacaacttttgt 25830277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 35818935 - 35818975
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  35818935 aagagaaatgatatttgcacaaccattttctaacaattttt 35818975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 43286038 - 43285994
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||    
T  43286038 aaaagagaaatgatatttggacaaccattttctaataacttttgt 43285994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 319
Target Start/End: Complemental strand, 33100542 - 33100500
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    
T  33100542 aagagaaatgatatttgaacaaccattttataacaacttttgt 33100500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 277 - 318
Target Start/End: Original strand, 1248251 - 1248292
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    ||||||||||||||||| ||||||||||||| ||||||||||    
T  1248251 aagagaaatgatatttgtacaaccattttcttacaacttttg 1248292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 277 - 318
Target Start/End: Original strand, 7376504 - 7376545
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    ||||||||||||||||| ||||||| ||||||||||||||||    
T  7376504 aagagaaatgatatttgtacaaccaatttctaacaacttttg 7376545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 276 - 313
Target Start/End: Complemental strand, 40719717 - 40719680
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaac 313  Q
    |||||||||||||||||| |||||||||||||||||||    
T  40719717 aaagagaaatgatatttgtacaaccattttctaacaac 40719680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 42620049 - 42620008
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||| ||| |||||||||||||||||||||    
T  42620049 agagaaatgatatttgtacatccattttctaacaacttttgt 42620008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 5771951 - 5771907
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||    
T  5771951 aaaagagaaatgatatttgaacaaccattttgtgacaacttttgt 5771907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 5772047 - 5772003
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||    
T  5772047 aaaagagaaatgatatttgaacaaccattttttgacaacttttgt 5772003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 10644873 - 10644833
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  10644873 gagaaatgatatttgtacaaccattttgtaacaacttttgt 10644833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 12959936 - 12959976
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||||||||||| |||||||||| ||||    
T  12959936 aagagaaatgatatttgcacaaccaatttctaacaattttt 12959976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 13970915 - 13970959
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| ||| |||||| ||||||||||||||    
T  13970915 aaaagagaaatgatatttgtacatccatttcctaacaacttttgt 13970959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 16808579 - 16808619
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||| ||||||||| |||||||||||||||||||||||    
T  16808579 aagagaattgatatttggacaaccattttctaacaactttt 16808619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 37033174 - 37033134
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||||||||||| ||||| |||||||||    
T  37033174 aagagaaatgatatttgcacaaccactttctgacaactttt 37033134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 319
Target Start/End: Complemental strand, 5601065 - 5601018
Alignment:
Q  272 tacaaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||| ||||||||||||||| ||||||||||| | |||||||||||    
T  5601065 tacaaatgagaaatgatatttgaacaaccattttttgacaacttttgt 5601018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 319
Target Start/End: Original strand, 5639555 - 5639602
Alignment:
Q  272 tacaaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||| ||||||||||||||| ||||||||||| | |||||||||||    
T  5639555 tacaaatgagaaatgatatttgaacaaccattttttgacaacttttgt 5639602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 317
Target Start/End: Complemental strand, 9048388 - 9048349
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  9048388 agagaaatgatatttgtataaccattttctaacaactttt 9048349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 318
Target Start/End: Original strand, 34018808 - 34018847
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  34018808 gagaaatgatatttgaacaaccattttctgacaacttttg 34018847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 319
Target Start/End: Original strand, 35067157 - 35067200
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||||| ||||||||||  |||||||||||||    
T  35067157 aaagagaaatgatatttgtacaaccatttcttaacaacttttgt 35067200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 318
Target Start/End: Complemental strand, 35937583 - 35937544
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  35937583 gagaaatgatatttgtacaaccattttgtaacaacttttg 35937544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 319
Target Start/End: Original strand, 12655920 - 12655962
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||| ||||||||||| ||| |||||||||    
T  12655920 aagagaaatgatatttgtacaaccattttataataacttttgt 12655962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 317
Target Start/End: Original strand, 22767132 - 22767170
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  22767132 gagaaatgatatttgtacaaccattttctcacaactttt 22767170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 317
Target Start/End: Original strand, 31806299 - 31806337
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  31806299 gagaaatgatatttgtacaaccattttctaacaattttt 31806337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 317
Target Start/End: Original strand, 41955925 - 41955967
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||||| | ||||||||| |||||||||||    
T  41955925 aaaagagaaatgatatttgtataaccattttttaacaactttt 41955967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 319
Target Start/End: Original strand, 43715873 - 43715914
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||| ||||||||||||||| |||||||||    
T  43715873 aagagaaatgatatttgtacaaccattttctaa-aacttttgt 43715914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 318
Target Start/End: Original strand, 3155841 - 3155882
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||    
T  3155841 aagagaaatgatatttgtacaaccactttttaacaacttttg 3155882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 318
Target Start/End: Original strand, 11584094 - 11584135
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    ||||||||||||||||| ||||||||||||| |||| |||||    
T  11584094 aagagaaatgatatttgtacaaccattttcttacaatttttg 11584135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 29107991 - 29108032
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttt 316  Q
    ||||||||||||||||||| |||| |||||| ||||||||||    
T  29107991 aaaagagaaatgatatttgtacaatcattttttaacaacttt 29108032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 318
Target Start/End: Complemental strand, 43066667 - 43066626
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||    
T  43066667 aagagaaatgatatttgtacaaccactttttaacaacttttg 43066626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 318
Target Start/End: Complemental strand, 45253681 - 45253640
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    |||| |||||||||||| ||||||||||||| ||||||||||    
T  45253681 aagataaatgatatttgtacaaccattttcttacaacttttg 45253640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 1068602 - 1068646
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| ||||||| ||| | |||||||||||    
T  1068602 aaaagagaaatgatatttgaacaaccactttttgacaacttttgt 1068646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 318
Target Start/End: Complemental strand, 1158407 - 1158367
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    |||||||||||||||| ||||||| ||||||| ||||||||    
T  1158407 agagaaatgatatttgtacaaccaatttctaataacttttg 1158367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 6849147 - 6849187
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||| ||||||||||| ||| |||||||||||||||||||    
T  6849147 aagagcaatgatatttgaacagccattttctaacaactttt 6849187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 7598708 - 7598748
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  7598708 gagaaatgatatttgaacaaccattttttgacaacttttgt 7598748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 10839557 - 10839513
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||| |||||||||||||| ||||||| ||| |||||||||||||    
T  10839557 aaaaaagaaatgatatttgaacaaccaatttttaacaacttttgt 10839513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 20288529 - 20288573
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| ||||||| ||| | |||||||||||    
T  20288529 aaaagagaaatgatatttgtacaaccaatttgtgacaacttttgt 20288573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 21075158 - 21075202
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| ||||||| ||| | |||||||||||    
T  21075158 aaaagagaaatgatatttgtacaaccaatttgtgacaacttttgt 21075202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 21526352 - 21526312
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||||| ||| |||||||||||||    
T  21526352 gagaaatgatatttgtacaaccactttttaacaacttttgt 21526312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 23754778 - 23754738
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||||||||| ||| |||||||||    
T  23754778 gagaaatgatatttgaacaaccattttttaataacttttgt 23754738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 25987858 - 25987818
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  25987858 gagaaatgatatttgaacaaccatttttttacaacttttgt 25987818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 26026896 - 26026936
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  26026896 gagaaatgatatttgaacaaccattttttgacaacttttgt 26026936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 27259550 - 27259590
Alignment:
Q  94 caaaatacaaatgaacctcacctgaaaaagtacagaagctt 134  Q
    |||| ||||||||| ||||||||||||||||| ||||||||    
T  27259550 caaactacaaatgagcctcacctgaaaaagtagagaagctt 27259590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 41639861 - 41639821
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| ||| |||||||||||||| ||||    
T  41639861 aagagaaatgatatttgtacatccattttctaacaattttt 41639821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 42786731 - 42786691
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||||||||||| |||| ||||||    
T  42786731 gagaaatgatatttgtacaaccattttcttacaatttttgt 42786691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 578 - 637
Target Start/End: Complemental strand, 38310505 - 38310446
Alignment:
Q  578 agaaaccattgattgtcggtggcggtggattcatcggtactgaaggcggagaattggttg 637  Q
    |||||||||||| |||| ||||||||||||||||||| ||||||||||||| || |||||    
T  38310505 agaaaccattgactgtcagtggcggtggattcatcggcactgaaggcggaggatcggttg 38310446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 22098255 - 22098295
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  22098255 gagaaatgatatttgtacaaccattttctaacaacttttgt 22098295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 22647634 - 22647594
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  22647634 aagagaaatgatatttgcacaaccaatttctaacaactttt 22647594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 14322024 - 14321986
Alignment:
Q  281 gaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  14322024 gaaatgatatttgtacaaccattttctaacaacttttgt 14321986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 317
Target Start/End: Original strand, 33393630 - 33393672
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  33393630 aaaagagaaatgatatttgtacaaccattttctcacaactttt 33393672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 1293158 - 1293117
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||| ||||||||||| |||||||||||||    
T  1293158 agagaaatgatatttgtacaaccattttttaacaacttttgt 1293117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 276 - 317
Target Start/End: Complemental strand, 18638899 - 18638858
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  18638899 aaagagaaatgatatttgcacaaccattttattacaactttt 18638858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 278 - 319
Target Start/End: Original strand, 18695317 - 18695358
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||| ||||||||||| |||||||||||||    
T  18695317 agagaaatgatatttgtacaaccattttgtaacaacttttgt 18695358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 278 - 318
Target Start/End: Original strand, 844035 - 844075
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  844035 agagaaatgatatttgcacaaccattttttgacaacttttg 844075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 6758866 - 6758822
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||| || |||||||||||||||||| ||||||    
T  6758866 aaaagagaaatgatatatgtacaaccattttctaacaatttttgt 6758822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 319
Target Start/End: Complemental strand, 24468360 - 24468317
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||||| |||||||||||  ||||||||||||    
T  24468360 aaagagaaatgatatttgaacaaccatttttaaacaacttttgt 24468317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 319
Target Start/End: Complemental strand, 13089855 - 13089813
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||| ||||||||||| | |||||||||||    
T  13089855 aagagaaatgatatttgaacaaccattttttgacaacttttgt 13089813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 319
Target Start/End: Original strand, 14011315 - 14011357
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||| |||| |||||| |||||||||||||    
T  14011315 aagagaaatgatatttgaacaatcattttgtaacaacttttgt 14011357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 269 - 303
Target Start/End: Original strand, 14647552 - 14647586
Alignment:
Q  269 atttacaaaagagaaatgatatttgcacaaccatt 303  Q
    ||||||||||||||||||||||||| |||||||||    
T  14647552 atttacaaaagagaaatgatatttgtacaaccatt 14647586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 317
Target Start/End: Original strand, 31708370 - 31708408
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  31708370 gagaaatgatatttgtacaaccattttataacaactttt 31708408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 317
Target Start/End: Complemental strand, 32873220 - 32873182
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  32873220 gagaaatgatatttgtacaaccaatttctaacaactttt 32873182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 317
Target Start/End: Complemental strand, 36416133 - 36416095
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  36416133 gagaaatgatatttgtacaaccattttctaacaattttt 36416095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Original strand, 4088442 - 4088483
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||| ||| ||||||| |||||||||||||    
T  4088442 agagaaatgatatttgtacatccattttataacaacttttgt 4088483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 9168237 - 9168196
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||| ||||||| |||||||||| ||||||||||||||    
T  9168237 agagaaataatatttgtacaaccatttcctaacaacttttgt 9168196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 14206396 - 14206437
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttt 316  Q
    ||||||||||||||||||| ||||||||||| | ||||||||    
T  14206396 aaaagagaaatgatatttgtacaaccattttttgacaacttt 14206437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 318
Target Start/End: Original strand, 14914370 - 14914411
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    ||||||||||||||||| ||||||||||| | ||||||||||    
T  14914370 aagagaaatgatatttgtacaaccattttgtgacaacttttg 14914411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 319
Target Start/End: Original strand, 27487882 - 27487927
Alignment:
Q  274 caaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||||||| |||| || ||| |||||||||||||    
T  27487882 caaaagagaaatgatatttgaacaatcaatttttaacaacttttgt 27487927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 317
Target Start/End: Complemental strand, 31329196 - 31329159
Alignment:
Q  280 agaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  31329196 agaaatgatatttgcacaaccactttataacaactttt 31329159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 318
Target Start/End: Original strand, 2050926 - 2050966
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    |||||||||||||||| ||||||||||| |||||| |||||    
T  2050926 agagaaatgatatttgtacaaccattttgtaacaatttttg 2050966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 269 - 305
Target Start/End: Original strand, 4434472 - 4434508
Alignment:
Q  269 atttacaaaagagaaatgatatttgcacaaccatttt 305  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  4434472 atttataaaagagaaatgatatttgtacaaccatttt 4434508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 12891171 - 12891127
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| |||||||||||   |||||||||||    
T  12891171 aaaagagaaatgatatttgtacaaccatttttgcacaacttttgt 12891127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 16594447 - 16594407
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||| ||||||| |||||||||||||    
T  16594447 gagaaatgatatttgaacatccattttttaacaacttttgt 16594407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 16690499 - 16690539
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||||||||  |||||||||||||    
T  16690499 gagaaatgatatttgtacaaccatttcttaacaacttttgt 16690539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 19376205 - 19376165
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| ||||||| ||||| |||||||||    
T  19376205 aagagaaatgatatttgtacaaccactttctgacaactttt 19376165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 21155987 - 21156027
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  21155987 gagaaatgatatttgaacaaccattttttgacaacttttgt 21156027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 39032679 - 39032635
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| |||||||||||   |||||||||||    
T  39032679 aaaagagaaatgatatttgtacaaccatttttgtacaacttttgt 39032635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 276 - 319
Target Start/End: Complemental strand, 37894317 - 37894274
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  37894317 aaagagaaatgatatttgtacaaccattttctaacaacttttgt 37894274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 11335375 - 11335335
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  11335375 aagagaaatgatatttgtacaaccattttctaacaactttt 11335335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 32008031 - 32008071
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  32008031 aagagaaatgatatttgcacaaccaatttctaacaactttt 32008071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 48944781 - 48944741
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  48944781 gagaaatgatatttgtacaaccattttctaacaacttttgt 48944741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 36907039 - 36907086
Alignment:
Q  270 tttacaaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||    
T  36907039 tttacaaaagagaaatgatatttatacaaccattttataacaactttt 36907086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 278 - 317
Target Start/End: Complemental strand, 51032696 - 51032657
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  51032696 agagaaatgatatttgtacaaccattttctaacaactttt 51032657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 276 - 317
Target Start/End: Complemental strand, 40159912 - 40159871
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||||| ||||| |||||||||||||||||    
T  40159912 aaagagaaatgatatttgtacaactattttctaacaactttt 40159871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 278 - 319
Target Start/End: Original strand, 48287670 - 48287711
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||| ||||||||||| |||||||||||||    
T  48287670 agagaaatgatatttgtacaaccattttataacaacttttgt 48287711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 49761258 - 49761217
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||| |||||||||||||||||| ||||||    
T  49761258 agagaaatgatatttgtacaaccattttctaacaatttttgt 49761217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 29573427 - 29573387
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  29573427 gagaaatgatatttgtacaaccattttgtaacaacttttgt 29573387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 52963387 - 52963347
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  52963387 gagaaatgatatttgtacaaccattttttaacaacttttgt 52963347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 319
Target Start/End: Complemental strand, 45186626 - 45186583
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||| |||||||| |||||||||||||||||| ||||||    
T  45186626 aaagagaaaagatatttgtacaaccattttctaacaatttttgt 45186583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 276 - 318
Target Start/End: Complemental strand, 7288 - 7246
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    |||||||||||||||||| |||| |||||||| ||||||||||    
T  7288 aaagagaaatgatatttgtacaatcattttctgacaacttttg 7246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 319
Target Start/End: Original strand, 26550235 - 26550277
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||||||||||||| ||| || ||||||    
T  26550235 aagagaaatgatatttgcacaaccattttttaataatttttgt 26550277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 276 - 318
Target Start/End: Complemental strand, 27162543 - 27162501
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||    
T  27162543 aaagagaagtgatatttgtacaaccattttgtaacaacttttg 27162501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 317
Target Start/End: Complemental strand, 31017465 - 31017427
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  31017465 gagaaatgatatttgtacaatcattttctaacaactttt 31017427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 317
Target Start/End: Complemental strand, 33976469 - 33976427
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||    
T  33976469 aaaagagaaatgatatttgaacatccattttgtaacaactttt 33976427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 317
Target Start/End: Complemental strand, 38359381 - 38359339
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||||| |||| |||||| |||||||||||    
T  38359381 aaaagagaaatgatatttgtacaatcattttttaacaactttt 38359339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 317
Target Start/End: Complemental strand, 47988560 - 47988518
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||    
T  47988560 aaaagtgaaatgatatttgtacaactattttctaacaactttt 47988518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 317
Target Start/End: Complemental strand, 47997847 - 47997805
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||    
T  47997847 aaaagtgaaatgatatttgtacaactattttctaacaactttt 47997805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 317
Target Start/End: Complemental strand, 48007134 - 48007092
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||    
T  48007134 aaaagtgaaatgatatttgtacaactattttctaacaactttt 48007092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 319
Target Start/End: Original strand, 48405408 - 48405450
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||| ||||||||||| | |||||||||||    
T  48405408 aagagaaatgatatttgtacaaccattttgtgacaacttttgt 48405450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 319
Target Start/End: Complemental strand, 54099430 - 54099388
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||    
T  54099430 aagagaaataatatttgtacatccattttctaacaacttttgt 54099388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Original strand, 10811134 - 10811175
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||| ||||||||||| | |||||||||||    
T  10811134 agagaaatgatatttgaacaaccattttatgacaacttttgt 10811175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 301
Target Start/End: Original strand, 12792627 - 12792660
Alignment:
Q  268 catttacaaaagagaaatgatatttgcacaacca 301  Q
    |||||||||||||||||||||||||| |||||||    
T  12792627 catttacaaaagagaaatgatatttgtacaacca 12792660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 19150391 - 19150350
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||| |||| |||||| |||||||||||||    
T  19150391 agagaaatgatatttgtacaatcattttttaacaacttttgt 19150350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 22813069 - 22813110
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||||| ||||||| ||||| |||||||||    
T  22813069 aaagagaaatgatatttgtacaaccactttctgacaactttt 22813110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 318
Target Start/End: Original strand, 23377980 - 23378021
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    |||||||||||||||||  |||||||||||| ||||||||||    
T  23377980 aagagaaatgatatttgtgcaaccattttcttacaacttttg 23378021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 26279881 - 26279922
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||||| ||||||| ||||| |||||||||    
T  26279881 aaagagaaatgatatttgtacaaccactttctgacaactttt 26279922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 34628156 - 34628103
Alignment:
Q  264 agtgcatttacaaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||  | |||| |||||||||||| ||||||||||| |||||||||||    
T  34628156 agtgcatttctataagataaatgatatttgtacaaccattttttaacaactttt 34628103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 45054974 - 45055015
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgtt 320  Q
    ||||||||||||||| ||| ||||||||| ||||||||||||    
T  45054974 gagaaatgatatttgaacatccattttctgacaacttttgtt 45055015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 50745366 - 50745407
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||| |||||||||||| |||||||||||||||||| ||||    
T  50745366 aaagaaaaatgatatttgtacaaccattttctaacaattttt 50745407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 51410803 - 51410844
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||||| ||||||| ||||| |||||||||    
T  51410803 aaagagaaatgatatttgtacaaccactttctcacaactttt 51410844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 54134849 - 54134890
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||||| ||||||||||| | |||||||||    
T  54134849 aaagagaaatgatatttgtacaaccatttttttacaactttt 54134890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 8254024 - 8254064
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttt 316  Q
    |||||||||||||||||| ||||||||||| | ||||||||    
T  8254024 aaagagaaatgatatttgtacaaccattttgtgacaacttt 8254064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 11327108 - 11327148
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  11327108 gagaaatgatatttgtacaaccattttgtgacaacttttgt 11327148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 14207329 - 14207289
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||| ||||| |||||||||||||    
T  14207329 gagaaatgatatttgaacaacgattttgtaacaacttttgt 14207289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 14215077 - 14215037
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||| ||||| |||||||||||||    
T  14215077 gagaaatgatatttgaacaacgattttgtaacaacttttgt 14215037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 21579111 - 21579151
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttt 316  Q
    |||||||||||||||||  ||||||| ||||||||||||||    
T  21579111 aaagagaaatgatatttatacaaccaatttctaacaacttt 21579151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 318
Target Start/End: Complemental strand, 41448248 - 41448208
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    |||||||||||||||| |||||||||||  |||||||||||    
T  41448248 agagaaatgatatttgtacaaccatttttaaacaacttttg 41448208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 43169815 - 43169775
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| ||||||||||| | |||||||||    
T  43169815 aagagaaatgatatttgtacaaccattttgtgacaactttt 43169775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 44813517 - 44813477
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  44813517 gagaaatgatatatgtacaatcattttctaacaacttttgt 44813477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 44963894 - 44963850
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||| ||||||||| || |||| ||||||||||||||||||||    
T  44963894 aaaagataaatgatatctgaacaatcattttctaacaacttttgt 44963850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 45150150 - 45150190
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttt 316  Q
    |||||||||||||||||| |||| ||||| |||||||||||    
T  45150150 aaagagaaatgatatttgaacaatcatttgctaacaacttt 45150190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 48352996 - 48353036
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||| ||||||| |||||||||||||    
T  48352996 gagaaatgatatttgtacatccattttttaacaacttttgt 48353036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 49196693 - 49196733
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttt 316  Q
    |||||||||||||||||| ||||||||||| | ||||||||    
T  49196693 aaagagaaatgatatttgtacaaccattttgtgacaacttt 49196733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 50559287 - 50559243
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| ||||| ||||| | |||||||||||    
T  50559287 aaaagagaaatgatatttgtacaactattttttgacaacttttgt 50559243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 318
Target Start/End: Original strand, 50652387 - 50652427
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    |||||||||||||||| ||||||||||| | ||||||||||    
T  50652387 agagaaatgatatttgtacaaccattttatgacaacttttg 50652427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 52714733 - 52714773
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||| |||||||||||||| ||||||    
T  52714733 gagaaatgatatttgtacatccattttctaacaatttttgt 52714773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 54233539 - 54233499
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  54233539 gagaaatgatatttgtacaaccatttttttacaacttttgt 54233499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 276 - 319
Target Start/End: Original strand, 6336249 - 6336292
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  6336249 aaagagaaatgatatttgtacaaccattttctaacaacttttgt 6336292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 3585624 - 3585664
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  3585624 aagagaaatgatatttgcacaaccaatttctaacaactttt 3585664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 317
Target Start/End: Original strand, 11980651 - 11980689
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  11980651 gagaaatgatatttgtacaaccattttctaacaactttt 11980689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 317
Target Start/End: Complemental strand, 31635881 - 31635843
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  31635881 gagaaatgatatttgtacaaccattttctaacaactttt 31635843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 277 - 318
Target Start/End: Original strand, 5031921 - 5031962
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    ||||||||||||||||| ||||||||||| ||||||||||||    
T  5031921 aagagaaatgatatttgtacaaccattttgtaacaacttttg 5031962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 277 - 318
Target Start/End: Complemental strand, 39737759 - 39737718
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    ||||||||||||||||| ||||||| ||||||||||||||||    
T  39737759 aagagaaatgatatttgtacaaccaatttctaacaacttttg 39737718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 1052569 - 1052529
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| ||||||||||| |||||||||||    
T  1052569 aagagaaatgatatttgtacaaccattttttaacaactttt 1052529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 14797723 - 14797683
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  14797723 aagagaaatgatatttgtacaaccaatttctaacaactttt 14797683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 318
Target Start/End: Complemental strand, 40874332 - 40874293
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  40874332 gagaaatgatatttgtacaaccattttttaacaacttttg 40874293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 317
Target Start/End: Complemental strand, 6639543 - 6639505
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  6639543 gagaaataatatttgtacaaccattttctaacaactttt 6639505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 317
Target Start/End: Original strand, 7438564 - 7438606
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||||| |||||||||||  ||||||||||    
T  7438564 aaaagagaaatgatatttgaacaaccatttttaaacaactttt 7438606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 319
Target Start/End: Original strand, 24766150 - 24766192
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||| ||||||||||| ||| |||||||||    
T  24766150 aagagaaatgatatttgtacaaccattttttaataacttttgt 24766192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 319
Target Start/End: Original strand, 38821364 - 38821406
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||| ||||||||||| | |||||||||||    
T  38821364 aagagaaatgatatttgaacaaccattttatgacaacttttgt 38821406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 319
Target Start/End: Complemental strand, 43658783 - 43658741
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||    
T  43658783 aagagaaatgatatttgtacaatcatttcctaacaacttttgt 43658741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 317
Target Start/End: Complemental strand, 7498065 - 7498024
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||||| ||||||||||| | |||||||||    
T  7498065 aaagagaaatgatatttgtacaaccattttattacaactttt 7498024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 317
Target Start/End: Complemental strand, 13466149 - 13466108
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||||| ||||||| |||||||||| ||||    
T  13466149 aaagagaaatgatatttgtacaaccaatttctaacaattttt 13466108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Original strand, 14328380 - 14328421
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||| || ||||| |||||||||||||||||||    
T  14328380 agagaaatgatatatgtacaacaattttctaacaacttttgt 14328421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 318
Target Start/End: Original strand, 29168723 - 29168764
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    ||||||||||||||||| ||||||||||| | ||||||||||    
T  29168723 aagagaaatgatatttgtacaaccattttttgacaacttttg 29168764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Original strand, 41042253 - 41042293
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||| ||||||||||| |||||||||||||    
T  41042253 agagaaatgatatttgaacaaccatttt-taacaacttttgt 41042293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Original strand, 43057063 - 43057104
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||| ||||||| ||| |||||||||||||    
T  43057063 agagaaatgatatttgaacaaccactttttaacaacttttgt 43057104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 44484728 - 44484687
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||| ||||||||||| |||||| ||||||    
T  44484728 agagaaatgatatttgtacaaccattttgtaacaatttttgt 44484687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 3299178 - 3299138
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| ||||||||||| | |||||||||    
T  3299178 aagagaaatgatatttgtacaaccattttatgacaactttt 3299138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 4723564 - 4723604
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||| || ||||||||||| |||||||||||    
T  4723564 aagagaaatgatatatgtacaaccattttttaacaactttt 4723604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 6666018 - 6666058
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| ||||||||||| | |||||||||    
T  6666018 aagagaaatgatatttgtacaaccattttattacaactttt 6666058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 318
Target Start/End: Original strand, 14871639 - 14871679
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    |||||||||||||||| ||||||||||||| |||| |||||    
T  14871639 agagaaatgatatttgtacaaccattttcttacaatttttg 14871679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 305
Target Start/End: Complemental strand, 20534124 - 20534096
Alignment:
Q  277 aagagaaatgatatttgcacaaccatttt 305  Q
    |||||||||||||||||||||||||||||    
T  20534124 aagagaaatgatatttgcacaaccatttt 20534096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 21738687 - 21738647
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||||||||||||| || ||||||    
T  21738687 gagaaatgatatttgtacaaccattttctaataatttttgt 21738647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 276 - 316
Target Start/End: Complemental strand, 28165315 - 28165275
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttt 316  Q
    |||||||||| ||||||| |||||||||| |||||||||||    
T  28165315 aaagagaaataatatttgaacaaccatttgctaacaacttt 28165275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 35334520 - 35334560
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||||||||| ||| |||||||||    
T  35334520 gagaaatgatatttgtacaaccattttataataacttttgt 35334560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 274 - 318
Target Start/End: Original strand, 36774533 - 36774577
Alignment:
Q  274 caaaagagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    |||||||||||| ||||||| | | ||||||||||||||||||||    
T  36774533 caaaagagaaataatatttgtagagccattttctaacaacttttg 36774577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 318
Target Start/End: Complemental strand, 36909915 - 36909875
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    |||||||||||||||| ||||||||||| | ||||||||||    
T  36909915 agagaaatgatatttgtacaaccattttgtgacaacttttg 36909875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 37731275 - 37731231
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| ||||||| ||| | |||||||||||    
T  37731275 aaaagagaaatgatatttgaacaaccactttttgacaacttttgt 37731231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 42141670 - 42141626
Alignment:
Q  274 caaaagagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    ||||||||||||||||| || ||||||||||| | ||||||||||    
T  42141670 caaaagagaaatgatatatgtacaaccattttttcacaacttttg 42141626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 318
Target Start/End: Original strand, 44996544 - 44996584
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    ||||||||| |||||| ||||||||||||| ||||||||||    
T  44996544 agagaaatggtatttgtacaaccattttcttacaacttttg 44996584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.000000000001; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 275 - 317
Target Start/End: Complemental strand, 22920346 - 22920304
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  22920346 aaaagagaaatgatatttgcacaaccaatttctaacaactttt 22920304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 275 - 317
Target Start/End: Original strand, 22971453 - 22971495
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  22971453 aaaagagaaatgatatttgcacaaccaatttctaacaactttt 22971495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 276 - 317
Target Start/End: Complemental strand, 1562610 - 1562569
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  1562610 aaagagaaatgatatttgtacaaccattttctaacaactttt 1562569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 32696861 - 32696820
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  32696861 agagaaatgatatttgtacaaccattttctaacaacttttgt 32696820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 274 - 317
Target Start/End: Complemental strand, 33820412 - 33820369
Alignment:
Q  274 caaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||||||| ||||| |||||||||||||||||    
T  33820412 caaaagagaaatgatatttgtacaactattttctaacaactttt 33820369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 275 - 318
Target Start/End: Original strand, 43358609 - 43358652
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||    
T  43358609 aaaagagaaatgatatttgtacaaccaatttctaacaacttttg 43358652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 317
Target Start/End: Original strand, 3968885 - 3968923
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  3968885 gagaaatgatatttgtacaaccattttctaacaactttt 3968923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 278 - 319
Target Start/End: Original strand, 15522353 - 15522394
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  15522353 agagaaatgatatatgtacaaccattttctaacaacttttgt 15522394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 277 - 318
Target Start/End: Original strand, 20118779 - 20118820
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    ||||||||||||||||| ||||||||||| ||||||||||||    
T  20118779 aagagaaatgatatttgaacaaccattttataacaacttttg 20118820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 55595946 - 55595987
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||||| ||||||| |||||||||||||||    
T  55595946 aaagagaaatgatatttgtacaaccaatttctaacaactttt 55595987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 278 - 318
Target Start/End: Complemental strand, 2004261 - 2004221
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  2004261 agagaaatgatatttgaacaaccattttttaacaacttttg 2004221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 11546975 - 11546935
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  11546975 aagagaaatgatatttttacaaccattttctaacaactttt 11546935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 12241056 - 12241096
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  12241056 aagagaaatgatatttgtacaactattttctaacaactttt 12241096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 47288078 - 47288122
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| ||||||||||| |||||| ||||||    
T  47288078 aaaagagaaatgatatttgtacaaccattttgtaacaatttttgt 47288122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 317
Target Start/End: Complemental strand, 7146196 - 7146153
Alignment:
Q  274 caaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||||||| |||||||||||  ||||||||||    
T  7146196 caaaagagaaatgatatttgaacaaccatttttaaacaactttt 7146153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 318
Target Start/End: Original strand, 8810571 - 8810610
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  8810571 gagaaatgatatttgtacaaccattttcttacaacttttg 8810610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 319
Target Start/End: Original strand, 34995317 - 34995360
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||| ||||||| ||||||||||| |||||||||||||    
T  34995317 aaagagaaattatatttgtacaaccattttgtaacaacttttgt 34995360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 318
Target Start/End: Complemental strand, 35824177 - 35824138
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  35824177 gagaaatgatatttgtacaaccattttttaacaacttttg 35824138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 318
Target Start/End: Complemental strand, 36812474 - 36812435
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    ||||||||||||||| ||||||| ||||||||||||||||    
T  36812474 gagaaatgatatttgtacaaccaatttctaacaacttttg 36812435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 319
Target Start/End: Complemental strand, 37514206 - 37514163
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||    
T  37514206 aaagagaaatgatatttgtacatccattttgtaacaacttttgt 37514163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 317
Target Start/End: Original strand, 40755920 - 40755959
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  40755920 agagaaatgatatttgtacaaccattttctaacaattttt 40755959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 316
Target Start/End: Original strand, 42510807 - 42510850
Alignment:
Q  273 acaaaagagaaatgatatttgcacaaccattttctaacaacttt 316  Q
    ||||||||| ||||||||||| |||||||||| |||||||||||    
T  42510807 acaaaagagcaatgatatttgaacaaccatttgctaacaacttt 42510850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 319
Target Start/End: Original strand, 42815401 - 42815444
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||    
T  42815401 aaagagaaatgatatttgtacaactattttgtaacaacttttgt 42815444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 317
Target Start/End: Original strand, 47998593 - 47998632
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||| ||||||||||| |||||||||||    
T  47998593 agagaaatgatatttgtacaaccattttgtaacaactttt 47998632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 317
Target Start/End: Complemental strand, 25725765 - 25725727
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  25725765 gagaaatgatatttgtacaaccactttctaacaactttt 25725727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 317
Target Start/End: Complemental strand, 29407097 - 29407059
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  29407097 gagaaatgatatttgtacaaccattttctaacaagtttt 29407059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 278 - 316
Target Start/End: Original strand, 32621637 - 32621675
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttt 316  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  32621637 agagaaatgatatttgcacaaccattttgtgacaacttt 32621675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 313
Target Start/End: Complemental strand, 33776884 - 33776850
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaac 313  Q
    ||||||||||||||| |||||||||||||||||||    
T  33776884 gagaaatgatatttgtacaaccattttctaacaac 33776850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 317
Target Start/End: Complemental strand, 39881101 - 39881063
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  39881101 gagaaatgatatttgtacaatcattttctaacaactttt 39881063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 317
Target Start/End: Complemental strand, 49424895 - 49424853
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||||| |||||| |||| |||||||||||    
T  49424895 aaaagagaaatgatatttgtacaacctttttgtaacaactttt 49424853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 319
Target Start/End: Original strand, 51255744 - 51255786
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||| ||||||||||| | |||||||||||    
T  51255744 aagagaaatgatatttgaacaaccattttttgacaacttttgt 51255786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 51359862 - 51359820
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttgtt 320  Q
    |||||||||||||||| ||||||||||| | ||||||||||||    
T  51359862 agagaaatgatatttgtacaaccattttgtgacaacttttgtt 51359820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 53463142 - 53463100
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttgtt 320  Q
    |||||||||||||||| ||||||||||| |||||| |||||||    
T  53463142 agagaaatgatatttgtacaaccattttataacaatttttgtt 53463100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 317
Target Start/End: Complemental strand, 53583203 - 53583161
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||    
T  53583203 aaaagagaaatgatatttgtacaaccactttctcacaactttt 53583161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 33278668 - 33278713
Alignment:
Q  272 tacaaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||||||||| ||||| ||||| | |||||||||    
T  33278668 tacaaaagagaaatgatatttgaacaactattttgtgacaactttt 33278713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 319
Target Start/End: Complemental strand, 41609755 - 41609710
Alignment:
Q  274 caaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||||||| ||| ||||||| | |||||||||||    
T  41609755 caaaagagaaatgatatttgtacatccattttatgacaacttttgt 41609710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 319
Target Start/End: Original strand, 42916653 - 42916690
Alignment:
Q  282 aaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  42916653 aaatgatatttgaacaaccattttataacaacttttgt 42916690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 319
Target Start/End: Complemental strand, 44257806 - 44257761
Alignment:
Q  274 caaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||||  ||| ||||||||||||| ||||||    
T  44257806 caaaagagaaatgatatttgtgcaatcattttctaacaatttttgt 44257761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 319
Target Start/End: Original strand, 56557724 - 56557773
Alignment:
Q  270 tttacaaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||| ||||||||||||||||||| ||||| ||||| | |||||||||||    
T  56557724 tttagaaaagagaaatgatatttgaacaacaattttatgacaacttttgt 56557773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 1796053 - 1796013
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||| ||||| |||||||||||||    
T  1796053 gagaaatgatatttgtacaacaattttttaacaacttttgt 1796013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 3078979 - 3078939
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| |||| |||||| |||||||||||||    
T  3078979 gagaaatgatatttgtacaatcattttgtaacaacttttgt 3078939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 3475869 - 3475909
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  3475869 gagaaatgatatttgtacaaccattttatgacaacttttgt 3475909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 276 - 316
Target Start/End: Complemental strand, 23220522 - 23220482
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttt 316  Q
    |||||| ||||||||||| |||||||||| |||||||||||    
T  23220522 aaagagcaatgatatttgaacaaccatttgctaacaacttt 23220482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 318
Target Start/End: Complemental strand, 24088636 - 24088596
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    |||||||||||||||| ||||||||||| | ||||||||||    
T  24088636 agagaaatgatatttgtacaaccattttatgacaacttttg 24088596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 31469060 - 31469020
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||| || |||||||||||||||||| ||||||    
T  31469060 gagaaatgatatatgtacaaccattttctaacaatttttgt 31469020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 43174980 - 43175023
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||    
T  43174980 aaaagagaaatgatatttgaacaaccatttt-ttacaacttttgt 43175023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 269 - 305
Target Start/End: Original strand, 43434337 - 43434373
Alignment:
Q  269 atttacaaaagagaaatgatatttgcacaaccatttt 305  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  43434337 atttaaaaaagagaaatgatatttgtacaaccatttt 43434373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000004; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 12999894 - 12999853
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  12999894 agagaaatgatatttgtacaaccattttctaacaacttttgt 12999853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 278 - 317
Target Start/End: Complemental strand, 18541123 - 18541084
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  18541123 agagaaatgatatttgtacaaccattttctaacaactttt 18541084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 317
Target Start/End: Original strand, 12708086 - 12708128
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||||| | |||||||||||||||||||||    
T  12708086 aaaagagaaatgatatttgtagaaccattttctaacaactttt 12708128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 317
Target Start/End: Original strand, 12713540 - 12713582
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||||| | |||||||||||||||||||||    
T  12713540 aaaagagaaatgatatttgtagaaccattttctaacaactttt 12713582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 317
Target Start/End: Original strand, 12717631 - 12717673
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||||| | |||||||||||||||||||||    
T  12717631 aaaagagaaatgatatttgtagaaccattttctaacaactttt 12717673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 319
Target Start/End: Complemental strand, 21433474 - 21433432
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    
T  21433474 aagagaaatgatatttgtacaaccattttgtaacaacttttgt 21433432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 317
Target Start/End: Original strand, 33076119 - 33076157
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  33076119 gagaaatgatatttgtacaaccattttctaacaactttt 33076157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 49020475 - 49020435
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  49020475 gagaaatgatatttgtacaaccattttttaacaacttttgt 49020435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 317
Target Start/End: Complemental strand, 25989056 - 25989017
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||| ||||||||||| |||||||||||    
T  25989056 agagaaatgatatttgtacaaccattttttaacaactttt 25989017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 317
Target Start/End: Complemental strand, 27810319 - 27810280
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  27810319 agagaaatgatatttgtacaaccaatttctaacaactttt 27810280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 316
Target Start/End: Complemental strand, 47059956 - 47059913
Alignment:
Q  273 acaaaagagaaatgatatttgcacaaccattttctaacaacttt 316  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||    
T  47059956 acaaatgagaaatgatatttgtacaaccattttttaacaacttt 47059913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 319
Target Start/End: Complemental strand, 48983742 - 48983699
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||||| ||||||||||| | |||||||||||    
T  48983742 aaagagaaatgatatttgaacaaccattttttgacaacttttgt 48983699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 319
Target Start/End: Complemental strand, 741029 - 740987
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||  ||||| |||||||||||||||||||    
T  741029 aagagaaatgatatttatacaactattttctaacaacttttgt 740987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 317
Target Start/End: Complemental strand, 3606165 - 3606127
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  3606165 gagaaatgatatttgtacaaccaatttctaacaactttt 3606127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 319
Target Start/End: Original strand, 11947793 - 11947835
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||| ||||||||||| | |||||||||||    
T  11947793 aagagaaatgatatttgtacaaccattttatgacaacttttgt 11947835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 317
Target Start/End: Complemental strand, 15182658 - 15182616
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||| |||||||||||||| ||||| |||||||||||||||||    
T  15182658 aaaaaagaaatgatatttgtacaactattttctaacaactttt 15182616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 319
Target Start/End: Original strand, 30973550 - 30973592
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||    
T  30973550 aagagaaatgatatttgtacaacccttttctaacaatttttgt 30973592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 43612145 - 43612103
Alignment:
Q  274 caaaagagaaatgatatttgcacaaccattttctaacaacttt 316  Q
    |||||||||||||||||||| ||||||||||| | ||||||||    
T  43612145 caaaagagaaatgatatttgtacaaccattttatgacaacttt 43612103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 278 - 316
Target Start/End: Complemental strand, 47386866 - 47386828
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttt 316  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  47386866 agagaaatgatatttgtacaaccattttataacaacttt 47386828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 48858817 - 48858863
Alignment:
Q  273 acaaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||||| ||||||| ||| | |||||||||||    
T  48858817 acaaaagagaaatgatatttgaacaaccactttttgacaacttttgt 48858863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 317
Target Start/End: Original strand, 51168656 - 51168694
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  51168656 gagaaatgatatttgaacaaccatttgctaacaactttt 51168694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 317
Target Start/End: Original strand, 51848876 - 51848918
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||| || ||||||||| |||||||||||||||||||||||    
T  51848876 aaaagataactgatatttgtacaaccattttctaacaactttt 51848918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 9567033 - 9566992
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||| ||||||||||| | |||||||||||    
T  9567033 agagaaatgatatttgaacaaccattttttgacaacttttgt 9566992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 320
Target Start/End: Complemental strand, 29706778 - 29706733
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgtt 320  Q
    ||||||||||||||||||| ||||||||||| | | ||||||||||    
T  29706778 aaaagagaaatgatatttgtacaaccattttatgataacttttgtt 29706733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 314
Target Start/End: Original strand, 29877299 - 29877332
Alignment:
Q  281 gaaatgatatttgcacaaccattttctaacaact 314  Q
    ||||||||||||| ||||||||||||||||||||    
T  29877299 gaaatgatatttgtacaaccattttctaacaact 29877332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 317
Target Start/End: Original strand, 32939171 - 32939208
Alignment:
Q  280 agaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  32939171 agaaatgatatttgaacaaccatttgctaacaactttt 32939208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 307
Target Start/End: Original strand, 35848407 - 35848440
Alignment:
Q  274 caaaagagaaatgatatttgcacaaccattttct 307  Q
    |||||||||||||||||||| |||||||||||||    
T  35848407 caaaagagaaatgatatttgtacaaccattttct 35848440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 42256456 - 42256497
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttt 316  Q
    ||||||||||||||||||| ||||||||||| | ||||||||    
T  42256456 aaaagagaaatgatatttgtacaaccattttgtgacaacttt 42256497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 317
Target Start/End: Complemental strand, 52233295 - 52233254
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||||||||||||||||| ||||||||||||| |||| ||||    
T  52233295 aaagagaaatgatatttgtacaaccattttctcacaattttt 52233254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 649768 - 649808
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  649768 gagaaatgatatttgaacaaccatttttttacaacttttgt 649808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 1615034 - 1615074
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| ||||||| ||||| |||||||||    
T  1615034 aagagaaatgatatttgtacaaccactttctcacaactttt 1615074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 4213068 - 4213112
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| ||||||||||| | | |||||||||    
T  4213068 aaaagagaaatgatatttgaacaaccattttttgataacttttgt 4213112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 9011642 - 9011682
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttt 316  Q
    |||||||||||||||||| ||||||||||| | ||||||||    
T  9011642 aaagagaaatgatatttgtacaaccattttgtgacaacttt 9011682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 9987947 - 9987991
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| ||||||| ||| | |||||||||||    
T  9987947 aaaagagaaatgatatttgaacaaccaatttttgacaacttttgt 9987991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 19947812 - 19947772
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  19947812 gagaaatgatatttgaacaaccattttttgacaacttttgt 19947772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 318
Target Start/End: Original strand, 26501294 - 26501334
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    |||||||||||||||| ||||||||||| ||| ||||||||    
T  26501294 agagaaatgatatttgtacaaccattttgtaataacttttg 26501334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 27742613 - 27742657
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| ||||||| ||| | |||||||||||    
T  27742613 aaaagagaaatgatatttgaacaaccactttttgacaacttttgt 27742657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 276 - 316
Target Start/End: Complemental strand, 40596117 - 40596077
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttt 316  Q
    |||||||||||||||||| ||||||||||| | ||||||||    
T  40596117 aaagagaaatgatatttgtacaaccattttgtgacaacttt 40596077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 44672103 - 44672063
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| |||| |||||| |||||||||||    
T  44672103 aagagaaatgatatttgtacaatcattttttaacaactttt 44672063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 45042259 - 45042299
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| ||||| |||||||||||| ||||    
T  45042259 aagagaaatgatatttgtacaactattttctaacaattttt 45042299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 49569996 - 49570036
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||| |||||| ||||||||||||||    
T  49569996 gagaaatgatatttgtacatccatttcctaacaacttttgt 49570036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 49931553 - 49931593
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| |||| |||||| |||||||||||||    
T  49931553 gagaaatgatatttgtacaatcattttttaacaacttttgt 49931593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 52362478 - 52362522
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| ||| ||||||| | |||||||||||    
T  52362478 aaaagagaaatgatatttgaacatccattttatgacaacttttgt 52362522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 52714972 - 52714932
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||| ||||||| |||||||||||||    
T  52714972 gagaaatgatatttgaacatccattttataacaacttttgt 52714932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000006; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 276 - 319
Target Start/End: Complemental strand, 25127907 - 25127864
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||||| ||||||||||| |||||||||||||    
T  25127907 aaagagaaatgatatttgtacaaccattttgtaacaacttttgt 25127864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 317
Target Start/End: Original strand, 32729885 - 32729927
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  32729885 aaaagagaaatgatatttgtacaaccattttctgacaactttt 32729927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 1376364 - 1376404
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||| ||||||| |||||||||||||||||||||||||    
T  1376364 gagaaattatatttgtacaaccattttctaacaacttttgt 1376404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 1384112 - 1384152
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||| ||||||| |||||||||||||||||||||||||    
T  1384112 gagaaattatatttgtacaaccattttctaacaacttttgt 1384152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 8778945 - 8778905
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| ||||||||||| |||||||||||    
T  8778945 aagagaaatgatatttgtacaaccattttttaacaactttt 8778905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 9189017 - 9188977
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| ||||||||||| |||||||||||    
T  9189017 aagagaaatgatatttgtacaaccattttttaacaactttt 9188977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 276 - 320
Target Start/End: Complemental strand, 15368897 - 15368853
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttttgtt 320  Q
    |||||||||||||||||| ||| ||||||| ||||||||||||||    
T  15368897 aaagagaaatgatatttgaacatccattttgtaacaacttttgtt 15368853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 15666846 - 15666806
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  15666846 aagagaaatgatatttgtacaaccattttctgacaactttt 15666806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 17551454 - 17551410
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||    
T  17551454 aaaagagaaatgatatttgaacaaccattttttgacaacttttgt 17551410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 26391358 - 26391318
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| ||||||||||| |||||||||||    
T  26391358 aagagaaatgatatttgtacaaccattttttaacaactttt 26391318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 319
Target Start/End: Complemental strand, 3339573 - 3339530
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||||| ||||||||||| | |||||||||||    
T  3339573 aaagagaaatgatatttgtacaaccattttgtgacaacttttgt 3339530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 16328763 - 16328724
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaacttt 316  Q
    ||||||||||||||||| ||||||||||| ||||||||||    
T  16328763 aagagaaatgatatttgtacaaccattttataacaacttt 16328724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 317
Target Start/End: Original strand, 17835612 - 17835650
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  17835612 gagaaatgatatttgtacaacccttttctaacaactttt 17835650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 319
Target Start/End: Complemental strand, 3552222 - 3552185
Alignment:
Q  282 aaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  3552222 aaatgatatttgtacaaccattttttaacaacttttgt 3552185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 3049603 - 3049563
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    |||| |||||||||||| |||| ||||||||||||||||||    
T  3049603 aagaaaaatgatatttgtacaatcattttctaacaactttt 3049563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 276 - 320
Target Start/End: Complemental strand, 15318262 - 15318218
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttttgtt 320  Q
    |||||||||||||||||| ||| ||||||| | ||||||||||||    
T  15318262 aaagagaaatgatatttgaacatccattttgtgacaacttttgtt 15318218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 19789149 - 19789109
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| ||||||||||| | |||||||||    
T  19789149 aagagaaatgatatttgtacaaccattttattacaactttt 19789109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 27334854 - 27334898
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| ||||| ||||| | |||||||||||    
T  27334854 aaaagagaaatgatatttgtacaactattttgtgacaacttttgt 27334898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 27395594 - 27395638
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| ||||| ||||| | |||||||||||    
T  27395594 aaaagagaaatgatatttgtacaactattttgtgacaacttttgt 27395638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 28965913 - 28965873
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| ||||||||||| | |||||||||    
T  28965913 aagagaaatgatatttgtacaaccattttgttacaactttt 28965873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 29383555 - 29383595
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| ||||||| ||||| |||||||||    
T  29383555 aagagaaatgatatttgtacaaccactttctgacaactttt 29383595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 278 - 318
Target Start/End: Original strand, 337117 - 337157
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    |||||||||||||||| ||||||||||||| ||||||||||    
T  337117 agagaaatgatatttgtacaaccattttctgacaacttttg 337157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 366294 - 366333
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  366294 gagaaatgatatttgtacaaccatttt-taacaacttttgt 366333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 317
Target Start/End: Complemental strand, 16665 - 16627
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  16665 gagaaatgatatttgtacaaccattttgtaacaactttt 16627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 317
Target Start/End: Original strand, 56179 - 56217
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  56179 gagaaatgatatttgtacaaccattttgtaacaactttt 56217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 317
Target Start/End: Complemental strand, 72240 - 72202
Alignment:
Q  279 gagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  72240 gagaaatgatatttgtacaaccattttgtaacaactttt 72202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 44372 - 44410
Alignment:
Q  94 caaaatacaaatgaacctcacctgaaaaagtacagaagc 132  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  44372 caaactacaaatgaacctcacctgaaaaagtagagaagc 44410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 204520 - 204476
Alignment:
Q  275 aaaagagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    ||||||||||||||||||| ||| | ||||||| |||||||||||    
T  204520 aaaagagaaatgatatttgtacatctattttctgacaacttttgt 204476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 6592 - 6551
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttgt 319  Q
    |||||||||||||||| |||| |||||| |||||||||||||    
T  6592 agagaaatgatatttgaacaatcattttttaacaacttttgt 6551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 276 - 316
Target Start/End: Complemental strand, 5415 - 5375
Alignment:
Q  276 aaagagaaatgatatttgcacaaccattttctaacaacttt 316  Q
    |||||| ||||||||||| |||||||||| |||||||||||    
T  5415 aaagagtaatgatatttgaacaaccatttgctaacaacttt 5375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 282 - 318
Target Start/End: Complemental strand, 31366 - 31330
Alignment:
Q  282 aaatgatatttgcacaaccattttctaacaacttttg 318  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  31366 aaatgatatttggacaaccattttgtaacaacttttg 31330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000009; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 60467 - 60507
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||||||||||| ||||||||||| | |||||||||    
T  60467 aagagaaatgatatttgtacaaccattttattacaactttt 60507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 91946 - 91986
Alignment:
Q  277 aagagaaatgatatttgcacaaccattttctaacaactttt 317  Q
    ||||||||| ||||||| ||||||| |||||||||||||||    
T  91946 aagagaaataatatttgtacaaccactttctaacaactttt 91986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 318
Target Start/End: Original strand, 72365 - 72405
Alignment:
Q  278 agagaaatgatatttgcacaaccattttctaacaacttttg 318  Q
    |||||||||||||||| |||||||||||  |||||||||||    
T  72365 agagaaatgatatttgtacaaccattttgcaacaacttttg 72405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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