View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0601_low_26 (Length: 351)
Name: NF0601_low_26
Description: NF0601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0601_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 100 - 257
Target Start/End: Original strand, 46714619 - 46714782
Alignment:
| Q |
100 |
tcttcttatataaatgacaacaaagaataaaaagagact----tatcaaatatcaaaatac--nnnnnnnnaagaaatatcaaaagacttgctatgtgaa |
193 |
Q |
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| T |
46714619 |
tcttcttatataaatgacaacaaagaataaaaagagacttatatatcaaatatcaaaatacttttttttaaaagaaatatcaaaagacttgctatgtgaa |
46714718 |
T |
|
| Q |
194 |
tgaattggnnnnnnnnnnagaggatgtgaatgaattagttgtgtatttatagagagaatagaaa |
257 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
46714719 |
tgaattggttttttttttagaggatgtgaatgaattagttgtgtatttatagagagaagagaaa |
46714782 |
T |
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