View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0601_low_4 (Length: 796)

Name: NF0601_low_4
Description: NF0601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0601_low_4
NF0601_low_4
[»] chr4 (51 HSPs)
chr4 (13-768)||(11821660-11822415)
chr4 (93-336)||(30470841-30471080)
chr4 (98-361)||(18830573-18830831)
chr4 (90-323)||(5448210-5448439)
chr4 (89-278)||(47943525-47943714)
chr4 (89-266)||(10380684-10380861)
chr4 (96-360)||(2634023-2634283)
chr4 (89-360)||(2063159-2063426)
chr4 (89-247)||(55382664-55382822)
chr4 (97-358)||(5324684-5324937)
chr4 (160-360)||(10757569-10757765)
chr4 (160-360)||(10970740-10970936)
chr4 (96-365)||(2232366-2232629)
chr4 (154-329)||(37694930-37695101)
chr4 (92-359)||(30378758-30379017)
chr4 (99-243)||(3369988-3370132)
chr4 (111-339)||(18836300-18836523)
chr4 (94-253)||(37695034-37695193)
chr4 (89-253)||(1387444-1387609)
chr4 (89-359)||(9826645-9826911)
chr4 (179-339)||(22017902-22018058)
chr4 (96-279)||(18500619-18500801)
chr4 (89-215)||(22017990-22018116)
chr4 (236-365)||(47463808-47463933)
chr4 (147-339)||(1387299-1387486)
chr4 (147-266)||(47144760-47144879)
chr4 (186-360)||(12140666-12140836)
chr4 (94-214)||(29908907-29909027)
chr4 (90-179)||(22017896-22017985)
chr4 (239-328)||(3391170-3391255)
chr4 (96-214)||(8951129-8951247)
chr4 (89-170)||(47463827-47463908)
chr4 (186-258)||(29908967-29909039)
chr4 (89-179)||(2063322-2063412)
chr4 (290-360)||(55382577-55382647)
chr4 (289-359)||(55382765-55382835)
chr4 (111-179)||(5448372-5448440)
chr4 (107-171)||(12140698-12140762)
chr4 (105-180)||(37694929-37695004)
chr4 (89-179)||(18830588-18830677)
chr4 (289-323)||(18836488-18836522)
chr4 (89-170)||(10757583-10757664)
chr4 (89-170)||(10970754-10970835)
chr4 (149-218)||(55382661-55382730)
chr4 (147-191)||(10757702-10757746)
chr4 (147-191)||(10970873-10970917)
chr4 (92-179)||(9826808-9826895)
chr4 (284-335)||(37695136-37695187)
chr4 (289-323)||(18830783-18830817)
chr4 (220-253)||(3370045-3370078)
chr4 (154-215)||(12140775-12140836)
[»] chr7 (32 HSPs)
chr7 (365-768)||(32921504-32921895)
chr7 (107-360)||(14197458-14197707)
chr7 (89-365)||(27508589-27508861)
chr7 (89-339)||(38761013-38761258)
chr7 (93-357)||(5080111-5080371)
chr7 (89-360)||(15000659-15000926)
chr7 (617-766)||(32910355-32910504)
chr7 (111-323)||(6441381-6441588)
chr7 (144-360)||(45012848-45013059)
chr7 (549-768)||(32940370-32940586)
chr7 (89-339)||(37787707-37787949)
chr7 (89-368)||(3404471-3404744)
chr7 (90-212)||(43257375-43257497)
chr7 (96-215)||(36150868-36150987)
chr7 (617-765)||(32932207-32932355)
chr7 (200-360)||(36150940-36151096)
chr7 (89-166)||(45013060-45013137)
chr7 (200-360)||(43257263-43257419)
chr7 (90-179)||(27508752-27508841)
chr7 (243-356)||(15272326-15272435)
chr7 (101-179)||(15272348-15272426)
chr7 (111-167)||(6441380-6441436)
chr7 (289-365)||(38761201-38761277)
chr7 (106-173)||(3404638-3404705)
chr7 (89-179)||(5080122-5080212)
chr7 (289-335)||(27508600-27508646)
chr7 (667-761)||(32897456-32897550)
chr7 (89-146)||(45012862-45012919)
chr7 (89-165)||(15000836-15000912)
chr7 (289-323)||(15000682-15000716)
chr7 (89-170)||(38761006-38761086)
chr7 (284-333)||(43257436-43257485)
[»] chr3 (43 HSPs)
chr3 (89-323)||(48755340-48755571)
chr3 (102-365)||(21514770-21515029)
chr3 (89-253)||(15031201-15031365)
chr3 (147-360)||(15031291-15031500)
chr3 (89-360)||(33343019-33343284)
chr3 (96-323)||(44967875-44968097)
chr3 (141-339)||(14434660-14434854)
chr3 (93-319)||(1426501-1426714)
chr3 (134-328)||(11989076-11989266)
chr3 (143-360)||(15005025-15005238)
chr3 (179-363)||(26498544-26498724)
chr3 (114-321)||(26920193-26920396)
chr3 (93-215)||(26498656-26498778)
chr3 (89-359)||(18445405-18445671)
chr3 (94-182)||(42453061-42453149)
chr3 (200-360)||(38498227-38498383)
chr3 (89-259)||(43562696-43562866)
chr3 (93-188)||(20758976-20759071)
chr3 (201-339)||(20759052-20759186)
chr3 (90-179)||(38498279-38498368)
chr3 (89-179)||(20759103-20759193)
chr3 (93-215)||(38498152-38498274)
chr3 (167-264)||(36383089-36383186)
chr3 (93-173)||(39541691-39541771)
chr3 (89-164)||(26498561-26498636)
chr3 (93-215)||(7300159-7300280)
chr3 (88-165)||(21514934-21515011)
chr3 (193-269)||(7300137-7300213)
chr3 (88-179)||(11989057-11989148)
chr3 (134-262)||(26840049-26840174)
chr3 (93-179)||(39541786-39541872)
chr3 (218-328)||(39541752-39541858)
chr3 (111-179)||(48755504-48755572)
chr3 (92-179)||(41984921-41985008)
chr3 (89-179)||(15031396-15031486)
chr3 (289-335)||(26498725-26498771)
chr3 (94-179)||(14434658-14434743)
chr3 (289-365)||(15031182-15031258)
chr3 (293-365)||(33343000-33343072)
chr3 (289-333)||(38498161-38498205)
chr3 (92-179)||(18445421-18445508)
chr3 (94-160)||(33412222-33412288)
chr3 (290-335)||(39541698-39541743)
[»] chr6 (17 HSPs)
chr6 (89-360)||(13536573-13536841)
chr6 (93-360)||(19295280-19295543)
chr6 (89-365)||(25089165-25089437)
chr6 (102-321)||(10862039-10862253)
chr6 (89-365)||(10587881-10588137)
chr6 (89-365)||(21222459-21222733)
chr6 (147-367)||(26705099-26705315)
chr6 (93-339)||(10672638-10672879)
chr6 (92-256)||(12651182-12651345)
chr6 (169-253)||(26705089-26705173)
chr6 (101-170)||(10587912-10587981)
chr6 (111-171)||(28752277-28752337)
chr6 (92-179)||(21222481-21222568)
chr6 (101-167)||(13536749-13536815)
chr6 (89-179)||(19295294-19295384)
chr6 (92-164)||(26705219-26705291)
chr6 (90-179)||(10672632-10672721)
[»] chr1 (14 HSPs)
chr1 (90-360)||(50335455-50335721)
chr1 (89-358)||(37607985-37608249)
chr1 (96-359)||(13735465-13735723)
chr1 (89-362)||(8097712-8097981)
chr1 (111-229)||(32374092-32374203)
chr1 (89-328)||(42847038-42847266)
chr1 (94-189)||(11633212-11633307)
chr1 (100-170)||(13735631-13735700)
chr1 (89-161)||(37608165-37608237)
chr1 (289-365)||(50335435-50335511)
chr1 (111-179)||(50335617-50335685)
chr1 (89-179)||(32373999-32374088)
chr1 (217-262)||(11633271-11633316)
chr1 (201-253)||(32374100-32374152)
[»] chr5 (26 HSPs)
chr5 (89-360)||(21943742-21944009)
chr5 (90-333)||(10760034-10760272)
chr5 (89-366)||(13753222-13753495)
chr5 (134-356)||(17497053-17497271)
chr5 (93-365)||(2555456-2555724)
chr5 (134-360)||(30100613-30100832)
chr5 (172-357)||(21211419-21211599)
chr5 (93-277)||(34419497-34419681)
chr5 (89-264)||(30852599-30852767)
chr5 (97-358)||(20429878-20430131)
chr5 (89-359)||(19491685-19491951)
chr5 (90-258)||(19564752-19564920)
chr5 (93-360)||(31912195-31912458)
chr5 (134-281)||(11298017-11298164)
chr5 (134-311)||(12895586-12895757)
chr5 (89-179)||(21211430-21211520)
chr5 (101-179)||(17497171-17497249)
chr5 (185-258)||(32539365-32539437)
chr5 (92-179)||(19491848-19491935)
chr5 (96-151)||(21211603-21211658)
chr5 (89-179)||(13753242-13753332)
chr5 (89-179)||(21943756-21943846)
chr5 (177-323)||(43548870-43549015)
chr5 (305-364)||(34419676-34419735)
chr5 (168-214)||(21211526-21211572)
chr5 (289-323)||(21211608-21211642)
[»] chr2 (12 HSPs)
chr2 (95-360)||(22092879-22093140)
chr2 (89-323)||(24006916-24007146)
chr2 (89-279)||(39598583-39598773)
chr2 (95-277)||(31819933-31820115)
chr2 (111-271)||(31499434-31499594)
chr2 (179-360)||(32092758-32092935)
chr2 (111-214)||(32092868-32092971)
chr2 (96-241)||(8219160-8219304)
chr2 (89-170)||(32092772-32092853)
chr2 (111-171)||(24006915-24006975)
chr2 (131-212)||(17914060-17914141)
chr2 (186-253)||(8219217-8219284)
[»] scaffold0102 (1 HSPs)
scaffold0102 (96-319)||(23912-24131)
[»] chr8 (32 HSPs)
chr8 (89-339)||(25149258-25149504)
chr8 (94-323)||(35202616-35202842)
chr8 (96-360)||(23976089-23976349)
chr8 (108-319)||(18324029-18324236)
chr8 (89-262)||(37543885-37544058)
chr8 (89-249)||(21124340-21124500)
chr8 (94-360)||(22469432-22469693)
chr8 (89-259)||(4289021-4289191)
chr8 (96-215)||(12106975-12107094)
chr8 (134-259)||(41358778-41358903)
chr8 (147-360)||(21124430-21124639)
chr8 (89-225)||(22426860-22426995)
chr8 (89-277)||(24609104-24609292)
chr8 (182-365)||(12106861-12107040)
chr8 (92-281)||(22326480-22326669)
chr8 (89-212)||(21184312-21184434)
chr8 (147-281)||(31253977-31254109)
chr8 (142-229)||(29585576-29585663)
chr8 (96-189)||(23625054-23625147)
chr8 (218-365)||(21185804-21185947)
chr8 (89-179)||(12106880-12106970)
chr8 (89-179)||(25149251-25149341)
chr8 (102-179)||(23976117-23976194)
chr8 (289-368)||(21184290-21184369)
chr8 (284-335)||(37494339-37494390)
chr8 (179-253)||(22426917-22426991)
chr8 (179-253)||(29585584-29585658)
chr8 (90-179)||(22469447-22469536)
chr8 (101-179)||(21124535-21124613)
chr8 (218-263)||(23625112-23625157)
chr8 (284-365)||(25149442-25149523)
chr8 (165-210)||(37494422-37494467)
[»] scaffold0003 (1 HSPs)
scaffold0003 (137-264)||(314139-314266)
[»] scaffold0066 (1 HSPs)
scaffold0066 (101-266)||(15390-15555)
[»] scaffold0407 (6 HSPs)
scaffold0407 (111-253)||(969-1111)
scaffold0407 (111-253)||(7433-7575)
scaffold0407 (147-323)||(872-1043)
scaffold0407 (147-323)||(7336-7507)
scaffold0407 (111-179)||(871-938)
scaffold0407 (111-179)||(7335-7402)
[»] scaffold0011 (2 HSPs)
scaffold0011 (92-360)||(190177-190441)
scaffold0011 (89-179)||(190191-190281)
[»] scaffold0026 (1 HSPs)
scaffold0026 (89-359)||(57462-57728)
[»] scaffold0024 (2 HSPs)
scaffold0024 (89-359)||(127817-128083)
scaffold0024 (92-179)||(127980-128067)
[»] scaffold1300 (3 HSPs)
scaffold1300 (178-359)||(1452-1629)
scaffold1300 (92-179)||(1526-1613)
scaffold1300 (289-360)||(1356-1427)
[»] scaffold0049 (4 HSPs)
scaffold0049 (205-353)||(59711-59855)
scaffold0049 (89-179)||(59718-59808)
scaffold0049 (175-215)||(59813-59853)
scaffold0049 (147-189)||(59807-59849)
[»] scaffold0047 (2 HSPs)
scaffold0047 (179-339)||(11676-11830)
scaffold0047 (93-215)||(11623-11744)
[»] scaffold0039 (2 HSPs)
scaffold0039 (89-360)||(27488-27742)
scaffold0039 (89-179)||(27502-27592)
[»] scaffold0018 (4 HSPs)
scaffold0018 (202-277)||(72008-72083)
scaffold0018 (92-163)||(71924-71995)
scaffold0018 (89-160)||(72106-72177)
scaffold0018 (287-360)||(72118-72191)


Alignment Details
Target: chr4 (Bit Score: 672; Significance: 0; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 672; E-Value: 0
Query Start/End: Original strand, 13 - 768
Target Start/End: Original strand, 11821660 - 11822415
Alignment:
Q  13 aatatcattcaagagttacctacctaagatgttgaaattaataaatatatccttcgagaatgttctctttaaatatgtccctgaataggaaaggagtcgt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| ||||||    
T  11821660 aatatcattcaagagttacctacctaagatgttgaaattaataaatatatcctttgagaatgatctctttaaatatgtccctaaataggaaagaagtcgt 11821759  T
Q  113 cactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaattta 212  Q
    ||||||||||||| ||| || ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11821760 cactttagtccttaaatacagataaattgcaaaatagtctttgaatgtagactctgttagttaatttagtccctgaatgcagatttcgttagtcaattta 11821859  T
Q  213 gtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcattcagg 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||| ||||||||||||    
T  11821860 gtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaagtctaaattcagagattgattgttttgcaatttctctgcattcagg 11821959  T
Q  313 gactaaagtgagtactcatttcccattgtagcactaaagtgactaatttcccattttttaaagggcctaaagacattgacaggagaaagaaaactgctcc 412  Q
    ||||||||| |||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11821960 gactaaagtaagtactcatttcccattgaaggactaaagtaactaatttcccattttttaaagggcctaaagacattgacaggagaaagaaaactgctcc 11822059  T
Q  413 actttgtcatactacatagtactatatatatgtaatatattagtgggaactaagaatgaaagatctacttcggttcctctaatttcaaaatggttttgct 512  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11822060 actttgtcatactacatagtactatatatatgtaatatattagtgggaactaagaatgaaagagctacttcggttcctctaatttcaaaatggttttgct 11822159  T
Q  513 tgggcaaaacaccaagaatatgatgaactttatgacactcatcacatttctactcttcacaatgccttccatttcttactcccaaaatcttggaaacaac 612  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11822160 tgggcaaaacaccaagaatatgatgaactttatgacactcatcacatttctactcttcataatgccttccatttcttactcccaaaatcttggaaacaac 11822259  T
Q  613 atattactcactaaccgtaagattttcccaaaacaagaaacaatttcctcgtacgctgttgtgtttgatgctggtagcactggaagccgtgtccatgttt 712  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11822260 atattactcactaaccgtaagattttcccaaaacaagaaacaatttcctcttacgctgttgtgtttgatgctggtagcactggaagccgtgtccatgttt 11822359  T
Q  713 accattttgatcaaaacttaaatcttcttcatgttggtaaagatgttgagttttat 768  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11822360 accattttgatcaaaacttaaatcttcttcatgttggtaaagatgttgagttttat 11822415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 93 - 336
Target Start/End: Complemental strand, 30471080 - 30470841
Alignment:
Q  93 ctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgc 192  Q
    |||||||| ||| |||||||||||||||| | |||||  | |||||||| ||||||||||||||||||||||| ||||| | ||||||||||||||||||    
T  30471080 ctgaatagaaaaagagtcgtcactttagttcctgaatgtagataaattgtaaaatagtccctgaatgtagactatgttaatcaatttagtccctgaatgc 30470981  T
Q  193 agattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgtttt 292  Q
    ||| ||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |    || ||||||    
T  30470980 agactccgttaatcaatttagtcattgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaatgctacatttagg----gagtgtttt 30470885  T
Q  293 gcaatttttctgcattcagggactaaagtgagtactcatttccc 336  Q
    ||||||| |||||||||||| |||||||||| ||||||||||||    
T  30470884 gcaatttctctgcattcaggaactaaagtgactactcatttccc 30470841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 98 - 361
Target Start/End: Complemental strand, 18830831 - 18830573
Alignment:
Q  98 taggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagatt 197  Q
    |||||||| | ||||||||||||||| ||||| || ||||||||||||||||||| |||||||||| |||||||||  |||||||||||||||||||| |    
T  18830831 taggaaagaaatcgtcactttagtccctgaatgcagataaattgcaaaatagtccttgaatgtagattctgttagtccatttagtccctgaatgcagact 18830732  T
Q  198 ccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaat 297  Q
     |||||||||||||||||  |||||||||||||  |||||||||||||||||||||||||||||||| |||||| ||||| |    || ||||| |||||    
T  18830731 tcgttagtcaatttagtccctgaatgtagactccattagtcactttagtccctgaaattgaccaacagaatctacattcagg----gactgtttagcaat 18830636  T
Q  298 ttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaattt 361  Q
    || ||||||| || |||||||||||| |||||||||| ||||   | |||||||||||||||||    
T  18830635 ttatctgcatcca-ggactaaagtgactactcatttctcattcagggactaaagtgactaattt 18830573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 90 - 323
Target Start/End: Original strand, 5448210 - 5448439
Alignment:
Q  90 tccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaa 189  Q
    ||||||||||||||||||||| ||| |||||||| ||||| || |||||||| ||||||| ||||||||||| ||||||||||| ||||||||||||| |    
T  5448210 tccctgaataggaaaggagtcatcattttagtccctgaatgcagataaattgtaaaatagcccctgaatgtaaactctgttagtcaatttagtccctgga 5448309  T
Q  190 tgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgt 289  Q
    |||||| |||||| ||||||||||||  ||||| ||||||   |||||||||||||| ||||||||||||||||| | | || ||||| |    || |||    
T  5448310 tgcagactccgttggtcaatttagtccctgaatatagacttcattagtcactttagttcctgaaattgaccaacagagtttacattcagg----gactgt 5448405  T
Q  290 tttgcaatttttctgcattcagggactaaagtga 323  Q
    |||||||||| |||||||||||||||||||||||    
T  5448406 tttgcaatttctctgcattcagggactaaagtga 5448439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 89 - 278
Target Start/End: Complemental strand, 47943714 - 47943525
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||||||||||||||| |||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||  |||||| |||||||| | |||    
T  47943714 gtccctgaataggaaatgagtcgtcactttagtccttaaatgcagataaattgcaaaatagtccctgaatgtagacttggttagtcaatttagttcttga 47943615  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaa 278  Q
    ||||||   ||||||||||||||| ||  |||||||||||| ||||| ||||| |||||||| |||||||||||||||||||| ||||||    
T  47943614 atgcaggaaccgttagtcaatttaatccctgaatgtagactatgttaatcactatagtccctaaaattgaccaacaaaatctacattcaa 47943525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 89 - 266
Target Start/End: Complemental strand, 10380861 - 10380684
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||| ||||||| |||  |||||| ||||||| || |||||||| |||||||||||||||||| || |||||||||||||||||| |||||| |||||||    
T  10380861 gtccttgaatagaaaataagtcgtaactttagcccctgaattcagataaattgcaaaatagtctctaaatgtagactctgttagtcaatttaatccctga 10380762  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaa 266  Q
    ||||||| | |||||||||||||||||  | ||||||||||| |||||||||||||||||||||||||||||||||||    
T  10380761 atgcagacttcgttagtcaatttagtccctaaatgtagactcagttagtcactttagtccctgaaattgaccaacaaa 10380684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 96 - 360
Target Start/End: Complemental strand, 2634283 - 2634023
Alignment:
Q  96 aataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcaga 195  Q
    |||| |||| ||||| |||||||||||  |||||  | ||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  2634283 aataagaaatgagtcttcactttagtcactgaatgtagataaattgctaaatagtctctgaatgtagactctgttagtcaatttagtccctgaatgcaga 2634184  T
Q  196 ttccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgca 295  Q
     || ||| ||||||||||||  |||||||||||| ||||| ||||||||||| |||||||||||||| ||| |||| ||||| |    || |||||||||    
T  2634183 ctctgttcgtcaatttagtccctgaatgtagactttgttaatcactttagtcgctgaaattgaccaataaagtctacattcagg----gactgttttgca 2634088  T
Q  296 atttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatt 360  Q
    |||| || |||||| | | ||||||||| ||||| |||| ||||   | ||||||||||||||||    
T  2634087 atttctcagcattcggcggctaaagtgactactcttttctcattcatggactaaagtgactaatt 2634023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 89 - 360
Target Start/End: Original strand, 2063159 - 2063426
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    ||||||||| |||||| |||||| |||||| || ||||||| || |||||||  |||||||||  |||||||| ||| ||||||| ||||||||| ||||    
T  2063159 gtccctgaagaggaaatgagtcggcactttggttcttgaatgcagataaattataaaatagtcattgaatgtaaactatgttagtcaatttagtctctga 2063258  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattg 288  Q
    ||||| | |||||||||||||||||||  | |||||||| | |||||||||||||||||  | ||||||||||||| | |||| ||||| |    || ||    
T  2063259 atgcaaactccgttagtcaatttagtccctaaatgtagaatttgttagtcactttagtctttaaaattgaccaacagagtctacattcagg----gactg 2063354  T
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatt 360  Q
     |||||||||| |||||| ||| ||| |||||||| |||||||||||||||  || ||||||||||||||||    
T  2063355 ctttgcaatttctctgcaatcaaggattaaagtgactactcatttcccattcaaggactaaagtgactaatt 2063426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 89 - 247
Target Start/End: Complemental strand, 55382822 - 55382664
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||| ||||||||||| |||||||||||||| ||| ||||| || |||||||||||||||||| ||||||||||||| ||||||| ||||| |||||| |    
T  55382822 gtccttgaataggaaatgagtcgtcactttaatccctgaatgcagataaattgcaaaatagtctctgaatgtagactttgttagtcaattttgtccctaa 55382723  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtc 247  Q
    |||||||||||||||||||||||||||  || |||||||||| ||||||||||||||||    
T  55382722 atgcagattccgttagtcaatttagtccctggatgtagactccgttagtcactttagtc 55382664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 97 - 358
Target Start/End: Complemental strand, 5324937 - 5324684
Alignment:
Q  97 ataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagat 196  Q
    |||| ||| ||||||||||||||||||| ||||    |||||||| ||||||||  |||| || ||||||||||||| |||||||| | ||||||||||     
T  5324937 atagaaaacgagtcgtcactttagtcctcgaat----ataaattgtaaaatagtttctgattgcagactctgttagtcaatttagttcatgaatgcagac 5324842  T
Q  197 tccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaa 296  Q
    || ||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||||||||||| | |||| ||||||     || ||||||||||    
T  5324841 tctgttagtcaatttagtccttgaatgtaaactctgttcgtcactttagtccctgaaattgaccaacagagtctacattcaa----agactgttttgcaa 5324746  T
Q  297 tttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaa 358  Q
    ||| ||||||| ||| | |||||| || ||||| |||| ||||   | ||||||||||||||    
T  5324745 tttctctgcatccagaggctaaagcgactactcctttcacattcagggactaaagtgactaa 5324684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 160 - 360
Target Start/End: Complemental strand, 10757765 - 10757569
Alignment:
Q  160 tagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgac 259  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||| ||||| || ||||||| ||||||    
T  10757765 tagactctgttagcgaatttagtccctgaatgcagactccgttagtcaatttagtccctgaatgtagactctgttaatcactataatccctgagattgac 10757666  T
Q  260 caacaaaatctaaattcaaggattgattgttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaat 359  Q
    ||||| | |||| || |    || || ||||||||||||| ||| ||||||||||||||||||| |||||||||| ||||   | |||||||||||||||    
T  10757665 caacatagtctacatcc----atggactgttttgcaatttatctacattcagggactaaagtgactactcatttctcattcagggactaaagtgactaat 10757570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 160 - 360
Target Start/End: Complemental strand, 10970936 - 10970740
Alignment:
Q  160 tagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgac 259  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||| ||||| || ||||||| ||||||    
T  10970936 tagactctgttagcgaatttagtccctgaatgcagactccgttagtcaatttagtccctgaatgtagactctgttaatcactataatccctgagattgac 10970837  T
Q  260 caacaaaatctaaattcaaggattgattgttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaat 359  Q
    ||||| | |||| || |    || || ||||||||||||| ||| ||||||||||||||||||| |||||||||| ||||   | |||||||||||||||    
T  10970836 caacatagtctacatcc----atggactgttttgcaatttatctacattcagggactaaagtgactactcatttctcattcagggactaaagtgactaat 10970741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 96 - 365
Target Start/End: Complemental strand, 2232629 - 2232366
Alignment:
Q  96 aataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcaga 195  Q
    |||| ||||||| ||||||||||||||| | |||  |||||||||| |||||||||| | |||||||||| ||||||| |||||| ||||||  || |||    
T  2232629 aataagaaaggaatcgtcactttagtccctaaatgtaaataaattgtaaaatagtccttcaatgtagactatgttagtcaatttaatccctggttg-aga 2232531  T
Q  196 ttccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgca 295  Q
     || ||||| ||||||||||  |||||||||||| | ||| |||||||||||||||||||||||||||| |||||| |||    ||  ||||||||||||    
T  2232530 ctctgttagccaatttagtccctgaatgtagact-ttttaatcactttagtccctgaaattgaccaacagaatctacatt----gagggattgttttgca 2232436  T
Q  296 atttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatttccca 365  Q
    |||| |||  |||||||||||||| ||| |||||||||  ||||   | |||||||||||||||| ||||    
T  2232435 atttctctctattcagggactaaattgactactcatttttcatttaggaactaaagtgactaattcccca 2232366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 154 - 329
Target Start/End: Complemental strand, 37695101 - 37694930
Alignment:
Q  154 tgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaa 253  Q
    |||||| ||||||||||||| |||||| ||||| ||||||||  ||||||||||||||||||  ||||| |||||||| ||||||||||||||| || ||    
T  37695101 tgaatgcagactctgttagtcaatttaatccctaaatgcagaccccgttagtcaatttagtccctgaatatagactctattagtcactttagtcacttaa 37695002  T
Q  254 attgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcattcagggactaaagtgagtactc 329  Q
    ||||||||||| |||||| ||||| |    || ||||||||||||| ||||||||||||||||||||||| |||||    
T  37695001 attgaccaacacaatctacattcagg----gactgttttgcaatttctctgcattcagggactaaagtgactactc 37694930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 92 - 359
Target Start/End: Original strand, 30378758 - 30379017
Alignment:
Q  92 cctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatg 191  Q
    ||||| ||||||| ||||| |||||||||||| || ||  |||||||||||||||||||| ||||||| ||||||||||||| |||| |||| |||||||    
T  30378758 cctgattaggaaaagagtcatcactttagtccctggatgtaaataaattgcaaaatagtctctgaatgcagactctgttagtcaattcagtctctgaatg 30378857  T
Q  192 cagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttt 291  Q
    |||| || ||||||||||| ||||  ||||| ||||||| |||||||||||||||  |||||||||||   |||| |||  |||||  ||  || |  ||    
T  30378858 cagactctgttagtcaattcagtccctgaat-tagactccgttagtcactttagtgtctgaaattgac---caaagtctgcattca--ga--gacttctt 30378949  T
Q  292 tgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtag-cactaaagtgactaat 359  Q
    |||||||| |||||||| |||||||||||||| ||||||||||| ||| |||  |||||||||||||||    
T  30378950 tgcaatttctctgcattaagggactaaagtgactactcatttcctatt-tagagactaaagtgactaat 30379017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 99 - 243
Target Start/End: Original strand, 3369988 - 3370132
Alignment:
Q  99 aggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattc 198  Q
    ||||||| ||| |||| |||||| | ||||| || ||||||||||||||||||  | |||||||||||||||||| ||||||||||||||||||||| |     
T  3369988 aggaaagaagttgtcattttagttcctgaatccagataaattgcaaaatagtcattaaatgtagactctgttagtcaatttagtccctgaatgcagactt 3370087  T
Q  199 cgttagtcaatttagtctatgaatgtagactctgttagtcacttt 243  Q
    |||||||||||||||||| | |||||||||||| |||||||||||    
T  3370088 cgttagtcaatttagtctcttaatgtagactctattagtcacttt 3370132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 111 - 339
Target Start/End: Complemental strand, 18836523 - 18836300
Alignment:
Q  111 gtcactttagtccttgaattcaaataaattgcaaaa-tagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaat 209  Q
    ||||||||||||| ||||| || | ||||||||||| || |||||||| |||||||||||||||  |||||||||||||||||||| |||||||||| ||    
T  18836523 gtcactttagtccctgaatgcagaaaaattgcaaaagtaatccctgaacgtagactctgttagtccatttagtccctgaatgcagactccgttagtc-at 18836425  T
Q  210 ttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcattc 309  Q
    ||||||  |||||||||||||  |||||||||||||||| | |||||||||||||   |  | ||| | |    || ||||||| ||||| |||||||||    
T  18836424 ttagtccctgaatgtagactccattagtcactttagtccataaaattgaccaacagcgttaacatttagg----gactgttttg-aatttatctgcattc 18836330  T
Q  310 agggactaaagtgagtactcatttcccatt 339  Q
    |||||||||||||| |||||||||| ||||    
T  18836329 agggactaaagtgactactcatttctcatt 18836300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 94 - 253
Target Start/End: Complemental strand, 37695193 - 37695034
Alignment:
Q  94 tgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgca 193  Q
    |||| |||||| ||||| |||||||||||||||||| || ||||||||||||||| || ||||||||||||||||||||| |||||| ||  ||||||||    
T  37695193 tgaaaaggaaatgagtcatcactttagtccttgaatgcagataaattgcaaaataatctctgaatgtagactctgttagtcaatttaatcgttgaatgca 37695094  T
Q  194 gattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaa 253  Q
    || || ||||||||||||| ||  | |||| |||| | |||||||| |||||||||||||    
T  37695093 gactctgttagtcaatttaatccctaaatgcagaccccgttagtcaatttagtccctgaa 37695034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 89 - 253
Target Start/End: Complemental strand, 1387609 - 1387444
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccc-tg 187  Q
    ||||||||||||||||| | || ||| ||||| || ||||| || |||||||| |||||| |||||||||||||| | ||||  | ||||||||||| ||    
T  1387609 gtccctgaataggaaagaaatcatcattttaggccctgaatgcagataaattgtaaaatattccctgaatgtagattttgttcatcaatttagtcccctg 1387510  T
Q  188 aatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaa 253  Q
    |||||||| || ||||||||||||||||  |||||||||||| |||||||||||||||| ||||||    
T  1387509 aatgcagactctgttagtcaatttagtcgctgaatgtagactttgttagtcactttagttcctgaa 1387444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 89 - 359
Target Start/End: Original strand, 9826645 - 9826911
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    ||||||||||||||||| | |  |||||||||||| ||||| || |||||||||||||||||  ||||||||| ||| ||||||| || |||||  ||||    
T  9826645 gtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgcaaaatagtttctgaatgtatactatgttagtcaacttagtatctga 9826744  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattg 288  Q
    ||||||| | ||||| |||||||| ||  ||||| ||||||| ||||||||| ||| ||| |||||||||| |||| | ||||  ||||||     | ||    
T  9826745 atgcagacttcgttaatcaatttaatccctgaatttagactcagttagtcacattaatccttgaaattgactaacagagtctacgttcaag----cactg 9826840  T
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaat 359  Q
    ||||||||||| |||||||||| | ||| |||||| ||||| ||||  |||   | |||||||||||||||    
T  9826841 ttttgcaatttctctgcattcaagtacttaagtgactactcttttctgattcaggaactaaagtgactaat 9826911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 179 - 339
Target Start/End: Complemental strand, 22018058 - 22017902
Alignment:
Q  179 tagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaa 278  Q
    ||||||||||||| ||| |  ||||||| ||||||||| |||||||| |||| |||| |||||||||||| ||||||||||||||| ||| || |||||     
T  22018058 tagtccctgaatgtagactatgttagtctatttagtctctgaatgtatactccgttaatcactttagtccttgaaattgaccaacagaatatacattcag 22017959  T
Q  279 ggattgattgttttgcaatttttctgcattcagggactaaagtgagtactcatttcccatt 339  Q
    |    || ||||||||||||| ||||||||||||||||||||||| ||||| |||||||||    
T  22017958 g----gactgttttgcaatttctctgcattcagggactaaagtgactactcctttcccatt 22017902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 96 - 279
Target Start/End: Original strand, 18500619 - 18500801
Alignment:
Q  96 aataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcaga 195  Q
    |||||||||| |||||||| |||||||   |||| |||||| |||| |||||| |   | |||||| ||| | ||||  |||||| |||||||||| |||    
T  18500619 aataggaaag-agtcgtcattttagtctcagaatacaaatagattgaaaaataatttttaaatgtaaactatattagccaatttaatccctgaatgtaga 18500717  T
Q  196 ttccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaag 279  Q
     || ||||||||||||||||  ||||| |||||||||||| ||||||||||| ||||||||||||||||  ||||| |||||||    
T  18500718 ctctgttagtcaatttagtccctgaatttagactctgttaatcactttagtctctgaaattgaccaacagtatctacattcaag 18500801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 89 - 215
Target Start/End: Complemental strand, 22018116 - 22017990
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||||| ||||||||| ||||||||| ||| |||  ||||| || |||||||||||||||||||||||||||||||| |||||||  |||||||| ||||    
T  22018116 gtccctaaataggaaatgagtcgtcattttcgtctctgaatgcagataaattgcaaaatagtccctgaatgtagactatgttagtctatttagtctctga 22018017  T
Q  189 atgcagattccgttagtcaatttagtc 215  Q
    ||| | | ||||||| ||| |||||||    
T  22018016 atgtatactccgttaatcactttagtc 22017990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 236 - 365
Target Start/End: Complemental strand, 47463933 - 47463808
Alignment:
Q  236 gtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcattcagggactaaagtgagtactcatttcc 335  Q
    ||||||||||||||||||||| | ||||| | |||| ||||||     || ||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  47463933 gtcactttagtccctgaaatttatcaacagagtctacattcaa----agactgttttgcaatttatctgcattcagggactaaagtgactactcatttcc 47463838  T
Q  336 cattgtagcactaaagtgactaatttccca 365  Q
    |||    | |||||||||||||||||||||    
T  47463837 catccagggactaaagtgactaatttccca 47463808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 147 - 339
Target Start/End: Complemental strand, 1387486 - 1387299
Alignment:
Q  147 tagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagt 246  Q
    ||||| ||||||||||||| ||||||| | |||||| |||||||||| |  |||||||||||||||||    |||||||||||  |||||||||||||||    
T  1387486 tagtcgctgaatgtagactttgttagtcactttagttcctgaatgcaaaccccgttagtcaatttagttccggaatgtagacttcgttagtcactttagt 1387387  T
Q  247 ccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcattcagggactaaagtgagtactcatttcccatt 339  Q
    |||| | |||||| ||| |||| || |||||||    || || |||| ||||| |||||||||| |||||||| ||| ||||| |||| ||||    
T  1387386 ccctaatattgactaac-aaatatacattcaag----gactgctttgtaatttctctgcattcatggactaaaatgactactcttttctcatt 1387299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 147 - 266
Target Start/End: Original strand, 47144760 - 47144879
Alignment:
Q  147 tagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagt 246  Q
    |||| ||||||||||||||| |||||| |||||||||| |||||  ||| ||||||| ||||||||||   |||||| |||||| ||| |||||||||||    
T  47144760 tagttcctgaatgtagactcagttagtcaatttagtccttgaataaagactccgttaatcaatttagttcctgaatgcagactccgttggtcactttagt 47144859  T
Q  247 ccctgaaattgaccaacaaa 266  Q
    || |||||||||| ||||||    
T  47144860 ccttgaaattgactaacaaa 47144879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 186 - 360
Target Start/End: Complemental strand, 12140836 - 12140666
Alignment:
Q  186 tgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattga 285  Q
    |||||| ||| |||||||||||||||||||  |||||||||| | ||||||||| |||||||||| |||||||  |||||| |||| ||| | |    ||    
T  12140836 tgaatgtagactccgttagtcaatttagtccttgaatgtagaatttgttagtcattttagtccctaaaattgattaacaaagtctatatttagg----ga 12140741  T
Q  286 ttgttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatt 360  Q
     ||||||||||||| | |||||||| ||| ||||||||  ||| ||||| ||||  || | ||||||||||||||    
T  12140740 ctgttttgcaatttctttgcattcaaggattaaagtgacgacttatttctcatttaaggattaaagtgactaatt 12140666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 94 - 214
Target Start/End: Original strand, 29908907 - 29909027
Alignment:
Q  94 tgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgca 193  Q
    ||||||||||| |||||||||||||||||  || || || ||||||||||||||||| | |||||| |||||| |||||| |||||||||  |||||| |    
T  29908907 tgaataggaaatgagtcgtcactttagtcactggatgcagataaattgcaaaatagttcatgaatgcagactccgttagtcaatttagtcgttgaatgta 29909006  T
Q  194 gattccgttagtcaatttagt 214  Q
    || ||| ||| ||| ||||||    
T  29909007 gagtccattattcactttagt 29909027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 22017896 - 22017985
Alignment:
Q  90 tccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    ||||||||| |||||||||| ||||||||||||| ||||| || | ||||||||||| |||||||||||||| | |||||| || |||||    
T  22017896 tccctgaatgggaaaggagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtatattctgttggtcaattt 22017985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 3391170 - 3391255
Alignment:
Q  239 actttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcattcagggactaaagtgagtact 328  Q
    |||||||||| |||||||||| |||||| |||| ||||||    ||||||||||||||||| ||||||||||| ||||||||||| ||||    
T  3391170 actttagtccttgaaattgactaacaaagtctacattcaa----tgattgttttgcaatttctctgcattcagagactaaagtgactact 3391255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 214
Target Start/End: Complemental strand, 8951247 - 8951129
Alignment:
Q  96 aataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcaga 195  Q
    |||||||||||| ||||||| ||||| | |||||  | |||||| | |||||||| |||||||||||| | ||||||| |||||||| ||| |||| |||    
T  8951247 aataggaaaggaatcgtcacattagttcctgaatatagataaatggtaaaatagttcctgaatgtagattttgttagtcaatttagttccttaatgtaga 8951148  T
Q  196 ttccgttagtcaatttagt 214  Q
     | ||||||||| ||||||    
T  8951147 cttcgttagtcattttagt 8951129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 47463827 - 47463908
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgtt 170  Q
    ||||||| || ||||| |||| ||||||||||||| ||||| || ||||||||||||| ||||  |||||||||||||||||    
T  47463827 gtccctggatgggaaatgagtagtcactttagtccctgaatgcagataaattgcaaaacagtctttgaatgtagactctgtt 47463908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 29908967 - 29909039
Alignment:
Q  186 tgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattga 258  Q
    |||||||||| |||||||||||||||||||  |||||||||| ||  ||| |||||||||| |||||||||||    
T  29908967 tgaatgcagactccgttagtcaatttagtcgttgaatgtagagtccattattcactttagttcctgaaattga 29909039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 2063412 - 2063322
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||| ||||| ||||| |||| ||||||||| ||||||| | || | ||||||||||  ||||||||||||||||||||||| || |||||    
T  2063412 gtccttgaatgggaaatgagtagtcactttaatccttgattgcagagaaattgcaaagcagtccctgaatgtagactctgttggtcaattt 2063322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 55382647 - 55382577
Alignment:
Q  290 tttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatt 360  Q
    |||||||||| |||||||||| |||||||||||| ||||||||| |||||  || |||||| |||||||||    
T  55382647 tttgcaatttctctgcattcacggactaaagtgactactcattttccattcaagaactaaaatgactaatt 55382577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 289 - 359
Target Start/End: Original strand, 55382765 - 55382835
Alignment:
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaat 359  Q
    ||||||||||| |||||||||||||| ||||||||  |||||||||| |||  || |||||||||||||||    
T  55382765 ttttgcaatttatctgcattcagggattaaagtgacgactcatttcctattcaaggactaaagtgactaat 55382835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 5448440 - 5448372
Alignment:
Q  111 gtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    ||||||||||||| ||||| || | ||||||||||| |||||||||||||| |||||||| || |||||    
T  5448440 gtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtaaactctgttggtcaattt 5448372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 12140698 - 12140762
Alignment:
Q  107 agtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgtta 171  Q
    ||||||||||||| ||||||||| |||| ||||||||||| ||||||| ||| |||||| |||||    
T  12140698 agtcgtcactttaatccttgaatgcaaagaaattgcaaaacagtccctaaatatagactttgtta 12140762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 37694929 - 37695004
Alignment:
Q  105 ggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattta 180  Q
    ||||| ||||||||||||| ||||| || | ||||||||||| |||||||||||||||| | |||| || ||||||    
T  37694929 ggagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagattgtgttggtcaattta 37695004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 18830588 - 18830677
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    ||||||||||  |||| |||| |||||||||||||| || | || ||||||||| ||| |||||||||||||||| |||||| || |||||    
T  18830588 gtccctgaatgagaaatgagtagtcactttagtcctgga-tgcagataaattgctaaacagtccctgaatgtagattctgttggtcaattt 18830677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 289 - 323
Target Start/End: Original strand, 18836488 - 18836522
Alignment:
Q  289 ttttgcaatttttctgcattcagggactaaagtga 323  Q
    |||||||||||||||||||||||||||||||||||    
T  18836488 ttttgcaatttttctgcattcagggactaaagtga 18836522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 10757583 - 10757664
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgtt 170  Q
    ||||||||||  |||| |||| ||||||||||||| |||||  | ||||||||||||| ||||| || ||||||||| ||||    
T  10757583 gtccctgaatgagaaatgagtagtcactttagtccctgaatgtagataaattgcaaaacagtccatggatgtagactatgtt 10757664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 10970754 - 10970835
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgtt 170  Q
    ||||||||||  |||| |||| ||||||||||||| |||||  | ||||||||||||| ||||| || ||||||||| ||||    
T  10970754 gtccctgaatgagaaatgagtagtcactttagtccctgaatgtagataaattgcaaaacagtccatggatgtagactatgtt 10970835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 55382730 - 55382661
Alignment:
Q  149 gtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctat 218  Q
    |||||| |||| ||| || |||||| ||||||||||||| ||| ||| ||||||||||| ||||||||||    
T  55382730 gtccctaaatgcagattccgttagtcaatttagtccctggatgtagactccgttagtcactttagtctat 55382661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 10757746 - 10757702
Alignment:
Q  147 tagtccctgaatgtagactctgttagttaatttagtccctgaatg 191  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||    
T  10757746 tagtccctgaatgcagactccgttagtcaatttagtccctgaatg 10757702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 10970917 - 10970873
Alignment:
Q  147 tagtccctgaatgtagactctgttagttaatttagtccctgaatg 191  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||    
T  10970917 tagtccctgaatgcagactccgttagtcaatttagtccctgaatg 10970873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 9826895 - 9826808
Alignment:
Q  92 cctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||||||  |||| |||| ||||||| ||| ||||||| || | ||||||||||| ||| | |||| ||||||||||||||| |||||    
T  9826895 cctgaatcagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtcaattt 9826808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 284 - 335
Target Start/End: Original strand, 37695136 - 37695187
Alignment:
Q  284 gattgttttgcaatttttctgcattcagggactaaagtgagtactcatttcc 335  Q
    |||| ||||||||||| |||||||||| ||||||||||||  ||||||||||    
T  37695136 gattattttgcaatttatctgcattcaaggactaaagtgatgactcatttcc 37695187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 323
Target Start/End: Original strand, 18830783 - 18830817
Alignment:
Q  289 ttttgcaatttttctgcattcagggactaaagtga 323  Q
    ||||||||||| |||||||||||||||||||||||    
T  18830783 ttttgcaatttatctgcattcagggactaaagtga 18830817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 3370045 - 3370078
Alignment:
Q  220 aatgtagactctgttagtcactttagtccctgaa 253  Q
    |||||||||||||||||||| |||||||||||||    
T  3370045 aatgtagactctgttagtcaatttagtccctgaa 3370078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 12140836 - 12140775
Alignment:
Q  154 tgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtc 215  Q
    ||||||||||||| |||||| |||||||||| |||||| ||| |  |||||||| |||||||    
T  12140836 tgaatgtagactccgttagtcaatttagtccttgaatgtagaatttgttagtcattttagtc 12140775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 270; Significance: 1e-150; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 365 - 768
Target Start/End: Original strand, 32921504 - 32921895
Alignment:
Q  365 attttttaaagggcctaaagacattgacaggagaaagaaaactgctccactttgtcatactacatagtactatatatatgtaatatattagtgggaacta 464  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||           ||||||||||||    
T  32921504 attttttaaagggcctaaagacattgacaggagaaagaaaactgctccactttatcatactacatagtattatatat-----------tagtgggaacta 32921592  T
Q  465 agaatgaaagatctacttcggttcctctaatttcaaaatggttttgcttgggcaaaacaccaagaatatgatgaactttatgacactcatcacatttcta 564  Q
    |||||| |||| ||||      |   ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  32921593 agaatgcaagagctaccaacactag-ctagtttcaaaatggttttgctttggcaaaacaccaagaatatgatgaactttatgacactcatcacatttctt 32921691  T
Q  565 ctcttcacaatgccttccatttcttactcccaaaatcttggaaacaacatattactcactaaccgtaagattttcccaaaacaagaaacaatttcctcgt 664  Q
    |||||||  |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  32921692 ctcttcattatgccttcaatttcttactcccaatatcttggaaacaacatattactcactaaccgtaagattttcccaaaacaagaaccaatttcctctt 32921791  T
Q  665 acgctgttgtgtttgatgctggtagcactggaagccgtgtccatgtttaccattttgatcaaaacttaaatcttcttcatgttggtaaagatgttgagtt 764  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32921792 atgctgttgtgtttgatgctggtagcactggaagccgtgtccatgtttaccattttgatcaaaacttaaatcttcttcatgttggtaaagatgttgagtt 32921891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 107 - 360
Target Start/End: Complemental strand, 14197707 - 14197458
Alignment:
Q  107 agtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtc 206  Q
    |||||||| ||||| || ||||| || ||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||    
T  14197707 agtcgtcattttagcccctgaatgcagataaattgcaatatagtccctgaatgtagactctgttagtcaatttaatccctgaatgcagactccgttagtc 14197608  T
Q  207 aatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgca 306  Q
    |||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||| |    ||| ||||||||||||| ||||||    
T  14197607 aatttagtctctcaatgtagactccgttagtcactttagtccctgaaattgaccaacagaatctacattcga----tgactgttttgcaatttctctgca 14197512  T
Q  307 ttcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatt 360  Q
    || |||||||||||||| ||||  ||||||||||  | |||||||||| |||||    
T  14197511 tttagggactaaagtgactacttttttcccattgaggaactaaagtgattaatt 14197458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 89 - 365
Target Start/End: Original strand, 27508589 - 27508861
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||||||||||||||| ||||| |||||||||||| ||||| || |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  27508589 gtccctgaataggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaatagtccctgaatgtagactatgttagtcaatttagtccctga 27508688  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattg 288  Q
    ||||||| || ||||||||||||||||  ||||||||||||| ||||||||||||||||| |||||||||| |||| | |||| ||||| |    || ||    
T  27508689 atgcagactctgttagtcaatttagtccctgaatgtagactccgttagtcactttagtccatgaaattgactaacagagtctacattcagg----gactg 27508784  T
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatttccca 365  Q
    ||||||||||| ||| | ||||||||||||||||| ||||| ||| |||||   | | |||||||||||||| ||||    
T  27508785 ttttgcaatttctctacgttcagggactaaagtgactactccttttccattcagggattaaagtgactaattcccca 27508861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 89 - 339
Target Start/End: Complemental strand, 38761258 - 38761013
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||||||||||||||| ||||| |||||||||||| ||||| || |||||||||||||||||||||||||||||||| ||||| | ||||||||||  ||    
T  38761258 gtccctgaataggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaatagtccctgaatgtagactttgttaatcaatttagtcctcga 38761159  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattg 288  Q
    ||||||| || ||||||||||||||||  |||||| |||||||||||||||||||||||||  ||||||| ||||| | |||| || ||      || ||    
T  38761158 atgcagactctgttagtcaatttagtccctgaatgcagactctgttagtcactttagtcccaaaaattgatcaacagagtctacatcca-----ggactg 38761064  T
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccatt 339  Q
    ||||||||||| ||| |||||| | |||||||||| ||||  |||||||||    
T  38761063 ttttgcaatttctctacattcacgaactaaagtgactacttctttcccatt 38761013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 93 - 357
Target Start/End: Complemental strand, 5080371 - 5080111
Alignment:
Q  93 ctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgc 192  Q
    ||||||||||||| |||||| | |||||||| ||||| || |||||||| ||||||||| ||||||||| ||| | ||||| ||||||||||||||||||    
T  5080371 ctgaataggaaagaagtcgttattttagtccctgaatgcagataaattgtaaaatagtctctgaatgtaaactatattagtcaatttagtccctgaatgc 5080272  T
Q  193 agattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgtttt 292  Q
    ||| ||||||| ||||||||||   ||||||||||||| |||| ||| |||||||| |||||||||| |||| | |||| ||||||     || ||||||    
T  5080271 agactccgttaatcaatttagtacctgaatgtagactccgttaatcattttagtccttgaaattgactaacagagtctacattcaa----agactgtttt 5080176  T
Q  293 gcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgacta 357  Q
    ||| ||| |||||||||||| |||||||||| ||||  |||||||||   | |||||||||||||    
T  5080175 gcattttctctgcattcaggaactaaagtgactacttttttcccattcagggactaaagtgacta 5080111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 89 - 360
Target Start/End: Original strand, 15000659 - 15000926
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    ||||||||||||||||||| | ||||||||||||| ||||| || ||||||||||||||| || | ||||||||| | ||||||| | |||||||| |||    
T  15000659 gtccctgaataggaaaggaattgtcactttagtccctgaatgcagataaattgcaaaatattctcagaatgtagattatgttagtcagtttagtccttga 15000758  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattg 288  Q
    ||| ||| |||| ||||||||||||||  | ||||||||||| ||| | ||||||||||||||||||||||||| ||| |||| ||| | |    || ||    
T  15000759 atgaagactccgatagtcaatttagtcccttaatgtagactccgttggacactttagtccctgaaattgaccaataaagtctacatttagg----gactg 15000854  T
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatt 360  Q
    ||||||||||  ||||||| ||  ||||||||||| |||||||||||||||   | ||||||||| ||||||    
T  15000855 ttttgcaattcctctgcatccaaagactaaagtgactactcatttcccattcagggactaaagtggctaatt 15000926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 617 - 766
Target Start/End: Original strand, 32910355 - 32910504
Alignment:
Q  617 tactcactaaccgtaagattttcccaaaacaagaaacaatttcctcgtacgctgttgtgtttgatgctggtagcactggaagccgtgtccatgtttacca 716  Q
    |||||||||| || |||||||||| ||||||||||||||||||||| || ||||| ||||||||||||||||||||||| |||||| | |||||||||||    
T  32910355 tactcactaatcgaaagattttccaaaaacaagaaacaatttcctcttatgctgtcgtgtttgatgctggtagcactggtagccgtattcatgtttacca 32910454  T
Q  717 ttttgatcaaaacttaaatcttcttcatgttggtaaagatgttgagtttt 766  Q
    ||||||||| |||||| ||||||||||| |||| ||||||||||||||||    
T  32910455 ttttgatcagaacttagatcttcttcatattggcaaagatgttgagtttt 32910504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 111 - 323
Target Start/End: Complemental strand, 6441588 - 6441381
Alignment:
Q  111 gtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatt 210  Q
    ||||||||||||  ||||| || ||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||| || |||||||||||    
T  6441588 gtcactttagtctctgaatgcagataaattgcaaaataatccctgaatgtagactttgttagtcaatttagtccctgaatgcagactctgttagtcaatt 6441489  T
Q  211 tagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcattca 310  Q
    |||||| | ||||||||||| |||||||||||| |||| |||||||||| || | | |||| ||||| |    || ||||||||||||| | ||||||||    
T  6441488 tagtctctaaatgtagactccgttagtcacttttgtccttgaaattgactaa-agagtctacattcagg----gactgttttgcaatttctttgcattca 6441394  T
Q  311 gggactaaagtga 323  Q
    ||||||| |||||    
T  6441393 gggactatagtga 6441381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 144 - 360
Target Start/End: Complemental strand, 45013059 - 45012848
Alignment:
Q  144 aaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcacttt 243  Q
    ||||||| |||||||||||| | ||||||| ||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||| | || |||||||    
T  45013059 aaatagttcctgaatgtagagtttgttagtcaatttagtccctgaatgcagactccgttagtcaatttaatctctgaatgtagactccgctaatcacttt 45012960  T
Q  244 agtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtag 343  Q
    ||||||||||||||||||| | | |||| |||  |     |||||||||||||||| | ||||||||| ||||||||||| ||||| |||||||||   |    
T  45012959 agtccctgaaattgaccaatagagtctacatttga-----gattgttttgcaatttctttgcattcagagactaaagtgactactcctttcccattcagg 45012865  T
Q  344 cactaaagtgactaatt 360  Q
     || |||||||||||||    
T  45012864 gaccaaagtgactaatt 45012848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 549 - 768
Target Start/End: Original strand, 32940370 - 32940586
Alignment:
Q  549 actcatcacatttctactcttcacaatgccttccatttcttactcccaaaatcttggaaacaacatattactcactaaccgtaagattttcccaaaacaa 648  Q
    ||||||||||||||||||||||   |||||| | || |||| ||||||| ||||||||||||| |||   ||||| || ||||| || || |||||||||    
T  32940370 actcatcacatttctactcttcttgatgcctacaatctcttcctcccaatatcttggaaacaatata---ctcaccaatcgtaaaatatttccaaaacaa 32940466  T
Q  649 gaaacaatttcctcgtacgctgttgtgtttgatgctggtagcactggaagccgtgtccatgtttaccattttgatcaaaacttaaatcttcttcatgttg 748  Q
    |||||  |  ||||||||||||| || ||||||||||||||||| || |||||||| ||||| |||||||||||||| |||||| ||||||||||  |||    
T  32940467 gaaactctaacctcgtacgctgtcgtctttgatgctggtagcaccggtagccgtgttcatgtctaccattttgatcagaacttagatcttcttcacattg 32940566  T
Q  749 gtaaagatgttgagttttat 768  Q
    | || |||||||||||||||    
T  32940567 gcaacgatgttgagttttat 32940586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 89 - 339
Target Start/End: Complemental strand, 37787949 - 37787707
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    ||||||||||| |||| || ||| ||||||||||| ||||| ||||   ||||||||||||| | |||||||||||| ||||||| ||||||||||||||    
T  37787949 gtccctgaataagaaatgaatcgccactttagtccctgaatgcaaa---attgcaaaatagttc-tgaatgtagactttgttagtcaatttagtccctga 37787854  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattg 288  Q
    ||||| | || ||||||||||||||||  ||||||||||||| | |||||| |||| ||  | |||||||| |||||||| || |||||  ||  || ||    
T  37787853 atgcatactctgttagtcaatttagtcgttgaatgtagactccgctagtcattttaatctttaaaattgacaaacaaaatttatattca--ga--gactg 37787758  T
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccatt 339  Q
    |||| |||| || ||| ||||||||||||||| || ||||| ||| |||||    
T  37787757 ttttacaatcttcctgtattcagggactaaagggactactctttttccatt 37787707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 89 - 368
Target Start/End: Original strand, 3404471 - 3404744
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||| ||||||| |||| | |||||| |||||| | | ||  || |||||||||||| |||||| |||||||| ||||||||||| |||||||||||| |    
T  3404471 gtccttgaatagaaaagaaatcgtcattttagtacctaaacgcagataaattgcaaagtagtccatgaatgtacactctgttagtcaatttagtccctaa 3404570  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattg 288  Q
    ||||||  || ||||||||||||||||  ||| |||||  ||  ||||||||||||||  |||| |||||| |||  | |||| |||||||    || |     
T  3404571 atgcag-ctctgttagtcaatttagtccctgagtgtag-ttccattagtcactttagtttctgatattgactaaccgagtctacattcaag----gacta 3404664  T
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatttcccattt 368  Q
    ||||||||||| ||||||||||||| ||||||||| ||||| ||| |||||   | |||||||||||||||  |||||||    
T  3404665 ttttgcaatttctctgcattcagggcctaaagtgactactctttttccatttaggaactaaagtgactaataccccattt 3404744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 43257497 - 43257375
Alignment:
Q  90 tccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaa 189  Q
    ||||||||||| ||| |||||||||||||| ||| ||||| || ||||||||||||||| ||| ||||| |||||||||||||| |||||||||||| ||    
T  43257497 tccctgaatagaaaatgagtcgtcactttaatccctgaatgcagataaattgcaaaataatccttgaatatagactctgttagtcaatttagtccctaaa 43257398  T
Q  190 tgcagattccgttagtcaattta 212  Q
    || ||| | ||||||||||||||    
T  43257397 tgtagacttcgttagtcaattta 43257375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 96 - 215
Target Start/End: Original strand, 36150868 - 36150987
Alignment:
Q  96 aataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcaga 195  Q
    ||||||||| |||||||||||| | ||| ||||| || ||||||||||||||| |||||  ||||||||||||||||| ||||||||| ||||||| | |    
T  36150868 aataggaaatgagtcgtcacttaaatccatgaatgcagataaattgcaaaataatccctagatgtagactctgttagtcaatttagtctctgaatgtaaa 36150967  T
Q  196 ttccgttagtcaatttagtc 215  Q
     ||||||||||| |||||||    
T  36150968 ctccgttagtcattttagtc 36150987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 617 - 765
Target Start/End: Original strand, 32932207 - 32932355
Alignment:
Q  617 tactcactaaccgtaagattttcccaaaacaagaaacaatttcctcgtacgctgttgtgtttgatgctggtagcactggaagccgtgtccatgtttacca 716  Q
    |||||||||| || |||||||||| ||||||||||||  |  | || ||||||||  | |||||||||||||||||||| |  |||||||||||||||||    
T  32932207 tactcactaatcgaaagattttccaaaaacaagaaaccttaacatcttacgctgtcatatttgatgctggtagcactggtactcgtgtccatgtttacca 32932306  T
Q  717 ttttgatcaaaacttaaatcttcttcatgttggtaaagatgttgagttt 765  Q
    |||||| || |||||| ||||||||||  |||| || ||| ||||||||    
T  32932307 ttttgaccagaacttagatcttcttcacattggcaatgatattgagttt 32932355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 200 - 360
Target Start/End: Original strand, 36150940 - 36151096
Alignment:
Q  200 gttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaattt 299  Q
    ||||||||||||||||| |||||||| |||| |||||||| |||||||| ||||||||||||||||| |||| ||||| |     | |||||||||||||    
T  36150940 gttagtcaatttagtctctgaatgtaaactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcagg----tactgttttgcaattt 36151035  T
Q  300 ttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatt 360  Q
     ||  |||||| ||| |||||||| ||||||||| ||||    | ||||||||||||||||    
T  36151036 ctcaacattcaaggattaaagtgactactcattttccatccagggactaaagtgactaatt 36151096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 45013137 - 45013060
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactc 166  Q
    |||||| ||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||| ||||| |||||||    
T  45013137 gtcccttaataggaaaagagtcgtcagtttagtccttgaatgcaaataaattgcaaaatagtccttgaatatagactc 45013060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 200 - 360
Target Start/End: Complemental strand, 43257419 - 43257263
Alignment:
Q  200 gttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaattt 299  Q
    ||||||||||||||||  | ||||||||||  |||||||| |||| |||||||||||||||||||||||||| |||||  ||  || | |||| ||||||    
T  43257419 gttagtcaatttagtccctaaatgtagacttcgttagtcaatttactccctgaaattgaccaacaaaatctacattca--ga--gactcttttacaattt 43257324  T
Q  300 ttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatt 360  Q
     | |||||||||||||||| |||| || |||||| |||||   | | ||||||||||||||    
T  43257323 ctatgcattcagggactaaggtgactattcattttccattcagggattaaagtgactaatt 43257263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 27508841 - 27508752
Alignment:
Q  90 tccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    ||||||||| | |||||||| ||||||||||||| ||||   | | ||||||||||| |||||||||||||||||||||||||| |||||    
T  27508841 tccctgaatggaaaaggagtagtcactttagtccctgaacgtagagaaattgcaaaacagtccctgaatgtagactctgttagtcaattt 27508752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 15272435 - 15272326
Alignment:
Q  243 tagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgta 342  Q
    |||||||||||||||||||||||| |||| ||||| ||| |     ||||||||||| ||||||||||||||||||| ||| |||||||||| ||||       
T  15272435 tagtccctgaaattgaccaacaaagtctacattcagggacta----ttttgcaatttctctgcattcagggactaaaatgactactcatttctcattcac 15272340  T
Q  343 gcactaaagtgact 356  Q
    | ||||||||||||    
T  15272339 ggactaaagtgact 15272326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 179
Target Start/End: Original strand, 15272348 - 15272426
Alignment:
Q  101 gaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||| |||| |||| |||||||| ||||| || | |||||||||||||||||||||||||||||| |||| || |||||    
T  15272348 gaaatgagtagtcattttagtccctgaatgcagagaaattgcaaaatagtccctgaatgtagactttgttggtcaattt 15272426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 6441380 - 6441436
Alignment:
Q  111 gtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactct 167  Q
    |||||| |||||| ||||| |||| ||||||||||| ||||||||||||||||||||    
T  6441380 gtcactatagtccctgaatgcaaagaaattgcaaaacagtccctgaatgtagactct 6441436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 38761201 - 38761277
Alignment:
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatttccca 365  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||| |||   | |||||||||| |||| |||||    
T  38761201 ttttgcaatttatctgcattcagggactaaagtgatgactcatttcctattcagggactaaagtgattaatctccca 38761277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 3404705 - 3404638
Alignment:
Q  106 gagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagt 173  Q
    |||| |||||||||| || ||||| || | ||||||||||||||||| ||||||||||||| ||||||    
T  3404705 gagtagtcactttaggccctgaatgcagagaaattgcaaaatagtccttgaatgtagactcggttagt 3404638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 5080122 - 5080212
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||||||||| |||||  ||| ||||||||||| | ||||| || | ||| ||||||| ||||  |||||||||||||||||||| |||||    
T  5080122 gtccctgaatgggaaaaaagtagtcactttagttcctgaatgcagagaaaatgcaaaacagtctttgaatgtagactctgttagtcaattt 5080212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 289 - 335
Target Start/End: Complemental strand, 27508646 - 27508600
Alignment:
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcc 335  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||    
T  27508646 ttttgcaatttatctgcattcagggactaaagtgatgactcatttcc 27508600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 667 - 761
Target Start/End: Original strand, 32897456 - 32897550
Alignment:
Q  667 gctgttgtgtttgatgctggtagcactggaagccgtgtccatgtttaccattttgatcaaaacttaaatcttcttcatgttggtaaagatgttga 761  Q
    |||||| | ||||||||||||||| |||| |||||||| |||||||  ||||||||||| || ||| ||||| ||||  |||| |||||| ||||    
T  32897456 gctgttatttttgatgctggtagctctggtagccgtgttcatgtttttcattttgatcagaatttagatcttgttcacattggcaaagatcttga 32897550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 45012862 - 45012919
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaa 146  Q
    |||||||||| |||||||||| ||||||||||||  ||||| |||| |||||||||||    
T  45012862 gtccctgaatgggaaaggagtagtcactttagtctctgaatgcaaagaaattgcaaaa 45012919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 165
Target Start/End: Complemental strand, 15000912 - 15000836
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagact 165  Q
    |||||||||| ||||| |||| |||||||||||| ||| || || |  |||||||||| ||||||| ||||||||||    
T  15000912 gtccctgaatgggaaatgagtagtcactttagtctttggatgcagaggaattgcaaaacagtccctaaatgtagact 15000836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 323
Target Start/End: Complemental strand, 15000716 - 15000682
Alignment:
Q  289 ttttgcaatttttctgcattcagggactaaagtga 323  Q
    ||||||||||| |||||||||||||||||||||||    
T  15000716 ttttgcaatttatctgcattcagggactaaagtga 15000682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 38761006 - 38761086
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgtt 170  Q
    |||||||||| |||||| ||| ||||||||||| | |||||  | | ||||||||||| ||| |||| ||||||||||||||    
T  38761006 gtccctgaatgggaaagaagtagtcactttagttcgtgaatgtagagaaattgcaaaacagt-cctggatgtagactctgtt 38761086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 43257436 - 43257485
Alignment:
Q  284 gattgttttgcaatttttctgcattcagggactaaagtgagtactcattt 333  Q
    |||| ||||||||||| |||||||||||||| ||||||||  ||||||||    
T  43257436 gattattttgcaatttatctgcattcagggattaaagtgacgactcattt 43257485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 4e-74; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 89 - 323
Target Start/End: Original strand, 48755340 - 48755571
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    ||||||||||||||||||||||||||||||||||  ||||| || |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48755340 gtccctgaataggaaaggagtcgtcactttagtctctgaatgcagataagttgcaaaatagtccctgaatgtagactctgttagtcaatttagtccctga 48755439  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactc-tgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgatt 287  Q
    ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||   |||||||||||||||||| | |||| |||| ||||   | |    
T  48755440 atgcagactccgttagtcaatttagtccatgaatgtagactcgtgttagtcactttgacccctgaaattgaccaacagagtctacattc-agga---act 48755535  T
Q  288 gttttgcaatttttctgcattcagggactaaagtga 323  Q
    |||||||||||| |||||||||||||||||||||||    
T  48755536 gttttgcaatttctctgcattcagggactaaagtga 48755571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 102 - 365
Target Start/End: Original strand, 21514770 - 21515029
Alignment:
Q  102 aaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgt 201  Q
    |||| ||||||||||||||||| ||||| || |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| || | |||    
T  21514770 aaagaagtcgtcactttagtccctgaatacagataaattgtaaaatagtccttgaatgtagactctgttagttaatttagtccctgaatgcggacttcgt 21514869  T
Q  202 tagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaattttt 301  Q
    ||||||||||||||  ||||||| |||||||||||| |||||| ||| ||||||||||||| | | |||| ||||| |    || ||||||| ||||| |    
T  21514870 tagtcaatttagtccttgaatgtggactctgttagttactttaatccatgaaattgaccaatatagtctacattcagg----gactgttttgaaatttat 21514965  T
Q  302 ctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatttccca 365  Q
    || |||||| |||||||| ||| ||||||||||| |||   | || ||||||||||||| ||||    
T  21514966 ctacattcaaggactaaaatgactactcatttccaattcagggacaaaagtgactaattcccca 21515029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 89 - 253
Target Start/End: Original strand, 15031201 - 15031365
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||| ||||| ||||| |||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  15031201 gtccttgaatgggaaaagagtcgtcactttagtccttgaatgcagataaattgtaaaatagtccctgaatgtagactctgttagtcaatttagtccctga 15031300  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaa 253  Q
    ||||| | |||||||||||||||||||  ||||||||||||| |||||||| ||||||| |||||    
T  15031301 atgcaaactccgttagtcaatttagtcactgaatgtagactccgttagtcaatttagtcactgaa 15031365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 147 - 360
Target Start/End: Original strand, 15031291 - 15031500
Alignment:
Q  147 tagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagt 246  Q
    ||||||||||||| | |||| |||||| ||||||||| ||||||| ||| |||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  15031291 tagtccctgaatgcaaactccgttagtcaatttagtcactgaatgtagactccgttagtcaatttagtcactgaatgtagactccgttagtcactttagt 15031390  T
Q  247 ccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcac 346  Q
    |||||||||||||||||||| |||| ||| | |    || ||||||||||||| ||||||||||| ||||||||||| |||||||||||||||   | ||    
T  15031391 ccctgaaattgaccaacaaagtctagatttagg----gactgttttgcaatttctctgcattcagagactaaagtgactactcatttcccattcagggac 15031486  T
Q  347 taaagtgactaatt 360  Q
    ||||||||||||||    
T  15031487 taaagtgactaatt 15031500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 89 - 360
Target Start/End: Original strand, 33343019 - 33343284
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||||||||||| ||| |||||||||||||||||| ||||| || ||||||||| |||| ||||||||||||||||| ||||||| || |||||||||||    
T  33343019 gtccctgaatagaaaatgagtcgtcactttagtccctgaatgcagataaattgctaaatggtccctgaatgtagactatgttagtcaa-ttagtccctga 33343117  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattg 288  Q
    ||||| | |  ||||||||||||||||  |||||||||||| ||||| ||| |||||| ||||||||||||||||| | | || |||||||    || ||    
T  33343118 atgcaaactatgttagtcaatttagtccctgaatgtagactttgttaatca-tttagttcctgaaattgaccaacagagtttatattcaag----gactg 33343212  T
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatt 360  Q
    ||||||||||| |||||||||||  |||||| ||  |||||||||||||||   | | ||||||||||||||    
T  33343213 ttttgcaatttctctgcattcagtaactaaaatgtctactcatttcccattcagggattaaagtgactaatt 33343284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 96 - 323
Target Start/End: Original strand, 44967875 - 44968097
Alignment:
Q  96 aataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcaga 195  Q
    ||||| ||| |||| ||||||||||||| ||||| |||||| |||||||||||||   |||||||||||||||||||| ||||||||| || ||| ||||    
T  44967875 aatagaaaatgagttgtcactttagtccctgaatgcaaatatattgcaaaatagtttttgaatgtagactctgttagtcaatttagtctctcaatacaga 44967974  T
Q  196 ttccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgca 295  Q
      || |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||| |||| ||| | |    || |||||||||    
T  44967975 ccccattagtcaatttagtctttgaatgtagactctcttagtcactttaatccctgaaattgaccaacaaagtctacatttagg----gactgttttgca 44968070  T
Q  296 atttttctgcattcagggactaaagtga 323  Q
    |||| ||| |||||| ||||||||||||    
T  44968071 atttatctacattca-ggactaaagtga 44968097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 141 - 339
Target Start/End: Complemental strand, 14434854 - 14434660
Alignment:
Q  141 gcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcac 240  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||| | || | |||| |||||||||| ||||||||||||| | |||||||    
T  14434854 gcaaaatagtccatgaatgtagactctgttagtcaatttagtccctgaatgcaaactcagatagttaatttagtctctgaatgtagactccgctagtcac 14434755  T
Q  241 tttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcattcagggactaaagtgagtactcatttcccatt 339  Q
    |||||||||||||||| || |||||| |||| |||||||    || ||||||||||| | |||||||| | |||||||||||| || ||||||||||||    
T  14434754 tttagtccctgaaattaactaacaaagtctacattcaag----gactgttttgcaatatctctgcatttacggactaaagtgactattcatttcccatt 14434660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 93 - 319
Target Start/End: Original strand, 1426501 - 1426714
Alignment:
Q  93 ctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgc 192  Q
    |||||||||||| |||||||||||||||  | ||||| || ||||||||||||||||| |||||||||||| | ||||||| ||||||||||||||||||    
T  1426501 ctgaataggaaatgagtcgtcactttagatcctgaatgcagataaattgcaaaatagttcctgaatgtagattatgttagtcaatttagtccctgaatgc 1426600  T
Q  193 agattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgtttt 292  Q
    ||| |||||||||||||||||||  | ||||||||||| ||||||||         |||||||||||||||||| |||| ||||    | ||| ||||||    
T  1426601 agactccgttagtcaatttagtccctaaatgtagactccgttagtca---------ctgaaattgaccaacaaagtctacattc----agtgactgtttt 1426687  T
Q  293 gcaatttttctgcattcagggactaaa 319  Q
    ||||||| |||||||||||||| ||||    
T  1426688 gcaatttctctgcattcagggattaaa 1426714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 134 - 328
Target Start/End: Complemental strand, 11989266 - 11989076
Alignment:
Q  134 ataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgt 233  Q
    |||||||||||||||||| ||   |||||||||||||||| ||| ||||||||||||||||| ||||||| |||||||||||  | ||||||||||| ||    
T  11989266 ataaattgcaaaatagtctctagttgtagactctgttagtcaatctagtccctgaatgcagactccgttaatcaatttagtccttaaatgtagactccgt 11989167  T
Q  234 tagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcattcagggactaaagtgagtact 328  Q
    ||| |||||||||| |||||||||||||||| | |||| ||||| |    || ||||||||||||| ||||||||||| ||||||||||| ||||    
T  11989166 tagccactttagtctctgaaattgaccaacagagtctatattcagg----gactgttttgcaatttctctgcattcagagactaaagtgactact 11989076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 143 - 360
Target Start/End: Original strand, 15005025 - 15005238
Alignment:
Q  143 aaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactt 242  Q
    |||||||||| |||||||||||||||||||| |||||| |||||||||||||| || |||||| |||||||||  |||||||| ||| ||||||||||||    
T  15005025 aaaatagtccttgaatgtagactctgttagtcaatttaatccctgaatgcagactcagttagttaatttagtccttgaatgtatactttgttagtcactt 15005124  T
Q  243 tagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgta 342  Q
     | ||||||||||||||| ||| | |||| |||||  ||   | ||||||||||||| ||||||||||| |||||||||||  | ||||| ||||||  |    
T  15005125 aaatccctgaaattgaccgacagagtctacattca--ga--aactgttttgcaatttctctgcattcagagactaaagtgaccagtcattacccattcaa 15005220  T
Q  343 gcactaaagtgactaatt 360  Q
    | | ||||||||||||||    
T  15005221 ggattaaagtgactaatt 15005238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 179 - 363
Target Start/End: Complemental strand, 26498724 - 26498544
Alignment:
Q  179 tagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaa 278  Q
    |||||| |||||| ||| || ||||||||||||||||  |||||| | |||| |||||||||||||||||||||||||||||||||   |||| |||||     
T  26498724 tagtccatgaatgtagactcggttagtcaatttagtcactgaatgcatactccgttagtcactttagtccctgaaattgaccaacatggtctacattcag 26498625  T
Q  279 ggattgattgttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatttcc 363  Q
    |    || ||||||||||||| ||||||||||||||||||||||| ||||| |||||||||   | |||||||||||||||||||    
T  26498624 g----gactgttttgcaatttctctgcattcagggactaaagtgactactcttttcccattcagggactaaagtgactaatttcc 26498544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 114 - 321
Target Start/End: Original strand, 26920193 - 26920396
Alignment:
Q  114 actttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttag 213  Q
    |||||||||| |||||  |||||||||||||||||||| || ||| |||||||| |||||||||||||| ||| |||| | | | |||||||||||||||    
T  26920193 actttagtccatgaatctaaataaattgcaaaatagtctctaaatatagactctattagttaatttagttcctcaatgtatacttcgttagtcaatttag 26920292  T
Q  214 tctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcattcaggg 313  Q
    ||  | ||||||| |||  |||||||||||| ||||||||||||| ||||||| | || |||||||     | ||||||||||||||||||||||||  |    
T  26920293 tccttaaatgtaggctccattagtcactttaatccctgaaattgatcaacaaagtatacattcaag----aactgttttgcaatttttctgcattcatag 26920388  T
Q  314 actaaagt 321  Q
    ||||||||    
T  26920389 actaaagt 26920396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 93 - 215
Target Start/End: Complemental strand, 26498778 - 26498656
Alignment:
Q  93 ctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgc 192  Q
    |||||||||||| ||||| |||||||||||| ||||| || ||||||||||||||||||| ||||||||||||| |||||| ||||||||| ||||||||    
T  26498778 ctgaataggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaatagtccatgaatgtagactcggttagtcaatttagtcactgaatgc 26498679  T
Q  193 agattccgttagtcaatttagtc 215  Q
    | | ||||||||||| |||||||    
T  26498678 atactccgttagtcactttagtc 26498656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 89 - 359
Target Start/End: Complemental strand, 18445671 - 18445405
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    ||||||||||||||||| | |  |||||||||||| ||||| || |||||||||||||||||  ||||||||| ||| ||||||| || |||||  ||||    
T  18445671 gtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgcaaaatagtttctgaatgtatactatgttagtcaacttagtatctga 18445572  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattg 288  Q
    ||||||| | ||||| |||||||| ||   |||| ||||||| ||||||||| ||| ||| |||||||||| |||| | ||||  ||||||     | ||    
T  18445571 atgcagacttcgttaatcaatttaatcccagaatttagactcagttagtcacattaatccttgaaattgactaacagagtctacgttcaag----cactg 18445476  T
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaat 359  Q
    ||||||||||| |||||||||| | ||| |||||| ||||| ||||  |||   | |||||||||||||||    
T  18445475 ttttgcaatttctctgcattcaagtacttaagtgactactcttttctgattcaggaactaaagtgactaat 18445405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 42453061 - 42453149
Alignment:
Q  94 tgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagt 182  Q
    ||||||| ||| |||||||||||||||||  ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  42453061 tgaatagaaaatgagtcgtcactttagtctatgaatgcaaataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagt 42453149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 200 - 360
Target Start/End: Original strand, 38498227 - 38498383
Alignment:
Q  200 gttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaattt 299  Q
    ||||||||||||||||  |||||||||||||| |||||||||||||||||| ||||| || |||||| |||| |||||  ||  || | |||||||||||    
T  38498227 gttagtcaatttagtccctgaatgtagactctattagtcactttagtccctaaaattaactaacaaagtctacattca--ga--gactattttgcaattt 38498322  T
Q  300 ttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatt 360  Q
     | ||||||||||||||||||||| ||||| |||| ||||   | | ||||||||||||||    
T  38498323 ctatgcattcagggactaaagtgactactcctttctcattcagggattaaagtgactaatt 38498383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 89 - 259
Target Start/End: Complemental strand, 43562866 - 43562696
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||||| ||||||||| || |||||| ||||||   ||||| || |||||||| |||||||||| |||||||||| |||||| || |||||| ||  |||    
T  43562866 gtccctcaataggaaatgattcgtcattttagtttctgaatgcagataaattgtaaaatagtccttgaatgtagattctgtttgtcaatttaatcgttga 43562767  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgac 259  Q
    ||||||| | | |||||||||||| ||  |||||||||||   |||||||||||||||| || ||||||||    
T  43562766 atgcagacttcattagtcaatttaatccctgaatgtagacatcgttagtcactttagtctctaaaattgac 43562696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 20758976 - 20759071
Alignment:
Q  93 ctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    ||||||| ||||  ||||||||||||||||||||||| || |||||||| ||||||||| |||||| |||||||| ||||| ||||||||||||||    
T  20758976 ctgaatatgaaataagtcgtcactttagtccttgaatacagataaattgtaaaatagtctctgaatatagactctattagtcaatttagtccctga 20759071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 201 - 339
Target Start/End: Original strand, 20759052 - 20759186
Alignment:
Q  201 ttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttt 300  Q
    |||||||||||||||  |||   |||||| ||||||||||||||||||||||||||||| |||||| |||| |||||||    || | |||||||||||     
T  20759052 ttagtcaatttagtccctgagaatagactatgttagtcactttagtccctgaaattgactaacaaagtctacattcaag----gactattttgcaatttc 20759147  T
Q  301 tctgcattcagggactaaagtgagtactcatttcccatt 339  Q
    |||||||||| |||||||| ||| ||||| |||| ||||    
T  20759148 tctgcattcaaggactaaaatgactactcctttctcatt 20759186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 38498368 - 38498279
Alignment:
Q  90 tccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||||||||  ||||||||| ||||||||||||| ||||| || | |||||||||||||||| ||||||||||||| |||||||||||||    
T  38498368 tccctgaatgagaaaggagtagtcactttagtccctgaatgcatagaaattgcaaaatagtctctgaatgtagactttgttagttaattt 38498279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 20759193 - 20759103
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    ||||||||||  ||||||||| |||| |||||||||||||| || | ||||||||||||||||| |||||||||||| ||||||| |||||    
T  20759193 gtccctgaatgagaaaggagtagtcattttagtccttgaatgcagagaaattgcaaaatagtccttgaatgtagactttgttagtcaattt 20759103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 93 - 215
Target Start/End: Original strand, 38498152 - 38498274
Alignment:
Q  93 ctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgc 192  Q
    |||||||| ||| ||||  |||||||||||| ||||| || ||||||||||||||||||| | ||| || ||| ||||||| |||||||||||||||||     
T  38498152 ctgaatagaaaatgagtgatcactttagtccctgaatgcagataaattgcaaaatagtccataaatataaactttgttagtcaatttagtccctgaatgt 38498251  T
Q  193 agattccgttagtcaatttagtc 215  Q
    ||| ||  ||||||| |||||||    
T  38498252 agactctattagtcactttagtc 38498274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 167 - 264
Target Start/End: Original strand, 36383089 - 36383186
Alignment:
Q  167 tgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaaca 264  Q
    ||||||| |||||| ||| |||||||||| |  ||| ||||||||||||| ||||| ||||||  ||||||||||||||||||| |||||||| ||||    
T  36383089 tgttagtcaatttaatccttgaatgcagactttgttggtcaatttagtctctgaatatagacttcgttagtcactttagtccctaaaattgactaaca 36383186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 93 - 173
Target Start/End: Original strand, 39541691 - 39541771
Alignment:
Q  93 ctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagt 173  Q
    |||||||||||| |||||||||||||||||  ||||| || |||||||||||| |||||||||||| |||| | |||||||    
T  39541691 ctgaataggaaatgagtcgtcactttagtctctgaatgcagataaattgcaaagtagtccctgaatatagattatgttagt 39541771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 164
Target Start/End: Original strand, 26498561 - 26498636
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagac 164  Q
    |||||||||| ||||| |||| ||||||||||||| ||||| || | ||||||||||| |||||||||||||||||    
T  26498561 gtccctgaatgggaaaagagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagac 26498636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 215
Target Start/End: Complemental strand, 7300280 - 7300159
Alignment:
Q  93 ctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgc 192  Q
    |||||||||||||||||||| | ||||||||| | || || ||||||| ||||||||| |   | |||||| ||||||||| |||||| ||||| |||||    
T  7300280 ctgaataggaaaggagtcgttattttagtcctcg-atgcacataaattacaaaatagtacgaaattgtagattctgttagtcaatttaatccctaaatgc 7300182  T
Q  193 agattccgttagtcaatttagtc 215  Q
    ||| || |||||||| |||||||    
T  7300181 agactctgttagtcactttagtc 7300159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 165
Target Start/End: Complemental strand, 21515011 - 21514934
Alignment:
Q  88 tgtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagact 165  Q
    ||||||||||| ||||| |||| |||| ||||||||||||||  | ||||||| ||||| ||||||||||||||||||    
T  21515011 tgtccctgaattggaaatgagtagtcattttagtccttgaatgtagataaatttcaaaacagtccctgaatgtagact 21514934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 193 - 269
Target Start/End: Complemental strand, 7300213 - 7300137
Alignment:
Q  193 agattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatc 269  Q
    |||||| ||||||||||||| ||  | |||| |||||||||||||||||||||||| |||| |||||||||| ||||    
T  7300213 agattctgttagtcaatttaatccctaaatgcagactctgttagtcactttagtccttgaatttgaccaacagaatc 7300137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 11989057 - 11989148
Alignment:
Q  88 tgtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    ||||||||||  |||||| ||| ||||||||||||  ||||| || | ||||||||||| ||||||||||| ||||||||||| || |||||    
T  11989057 tgtccctgaaagggaaagaagtagtcactttagtctctgaatgcagagaaattgcaaaacagtccctgaatatagactctgttggtcaattt 11989148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 262
Target Start/End: Original strand, 26840049 - 26840174
Alignment:
Q  134 ataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgt 233  Q
    ||||||| ||||||||||  ||||||||||||||   ||| |||||||||  | | || ||| ||||||||| |||||||||  ||||| || |||||||    
T  26840049 ataaattacaaaatagtctttgaatgtagactct---agtcaatttagtctttaattgaagactccgttagttaatttagtccttgaatataaactctgt 26840145  T
Q  234 tagtcactttagtccctgaaattgaccaa 262  Q
    ||||||||||| ||| || |||| |||||    
T  26840146 tagtcactttaatccatggaattaaccaa 26840174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 179
Target Start/End: Complemental strand, 39541872 - 39541786
Alignment:
Q  93 ctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||||||| |||| ||| ||||||||||||| ||||| || | |||||| |||| |||| |||||||||||||||||| || |||||    
T  39541872 ctgaatagaaaagaagtagtcactttagtccctgaatgcagagaaattgtaaaacagtctctgaatgtagactctgttggtcaattt 39541786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 328
Target Start/End: Original strand, 39541752 - 39541858
Alignment:
Q  218 tgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcattcagggacta 317  Q
    ||||| |||| | ||||||||||||| |||| | ||||||||||||| | |||| |||||  ||  || |||||| |||||| |||||||||||||||||    
T  39541752 tgaatatagattatgttagtcacttttgtccttaaaattgaccaacagagtctacattca--ga--gactgttttacaatttctctgcattcagggacta 39541847  T
Q  318 aagtgagtact 328  Q
    |||||| ||||    
T  39541848 aagtgactact 39541858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 48755572 - 48755504
Alignment:
Q  111 gtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    ||||||||||||| ||||| || | ||||||||||| ||| ||||||||||||||||||| || |||||    
T  48755572 gtcactttagtccctgaatgcagagaaattgcaaaacagttcctgaatgtagactctgttggtcaattt 48755504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 92 - 179
Target Start/End: Original strand, 41984921 - 41985008
Alignment:
Q  92 cctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||||||| |||| |||| ||||||| ||| ||||||| || | ||||||||||| ||| | |||| ||||||||||||||| |||||    
T  41984921 cctgaataagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtcaattt 41985008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 15031486 - 15031396
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||||||||| ||||| |||| ||||||||||||  ||||| || | ||||||||||| ||||||| ||| |||||| |||| || |||||    
T  15031486 gtccctgaatgggaaatgagtagtcactttagtctctgaatgcagagaaattgcaaaacagtccctaaatctagactttgttggtcaattt 15031396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 289 - 335
Target Start/End: Original strand, 26498725 - 26498771
Alignment:
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcc 335  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||    
T  26498725 ttttgcaatttatctgcattcagggactaaagtgatgactcatttcc 26498771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 179
Target Start/End: Original strand, 14434658 - 14434743
Alignment:
Q  94 tgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    ||||| ||||| || | ||||||||||||| | ||| || | | ||||||||| ||||| |||||||||||| |||||||||||||    
T  14434658 tgaatgggaaatgaatagtcactttagtccgtaaatgcagagatattgcaaaacagtccttgaatgtagactttgttagttaattt 14434743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 15031258 - 15031182
Alignment:
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatttccca 365  Q
    |||| |||||| |||||||||| ||||||||||||  |||| |||||||||  || ||||||||| ||||| |||||    
T  15031258 ttttacaatttatctgcattcaaggactaaagtgacgactcttttcccattcaaggactaaagtggctaatctccca 15031182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 33343072 - 33343000
Alignment:
Q  293 gcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatttccca 365  Q
    ||||||| |||||||||||||||||||||||  |||||||| | |||   | ||||||||||||||| |||||    
T  33343072 gcaatttatctgcattcagggactaaagtgacgactcattttctattcagggactaaagtgactaatctccca 33343000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 289 - 333
Target Start/End: Complemental strand, 38498205 - 38498161
Alignment:
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcattt 333  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||    
T  38498205 ttttgcaatttatctgcattcagggactaaagtgatcactcattt 38498161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 179
Target Start/End: Original strand, 18445421 - 18445508
Alignment:
Q  92 cctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||||||  |||| |||| ||||||| ||| ||||||| || | ||||||||||| ||| | |||| ||||||||||||||| |||||    
T  18445421 cctgaatcagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtcaattt 18445508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 33412222 - 33412288
Alignment:
Q  94 tgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgt 160  Q
    ||||||||||| || ||||||||||| || | |||| || |||||||| |||||||||| |||||||    
T  33412222 tgaataggaaatgaatcgtcactttaatcttcgaatgcagataaattgtaaaatagtccttgaatgt 33412288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 39541743 - 39541698
Alignment:
Q  290 tttgcaatttttctgcattcagggactaaagtgagtactcatttcc 335  Q
    |||||||||| ||||||||||| |||||||||||  ||||||||||    
T  39541743 tttgcaatttatctgcattcagagactaaagtgacgactcatttcc 39541698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 140; Significance: 6e-73; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 89 - 360
Target Start/End: Original strand, 13536573 - 13536841
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||||||||||||||||||| |||||||||| | | ||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13536573 gtccctgaataggaaaggagccgtcactttaatgcctgaatgcagataaattgcaaaatagtccctgaatgtagactctgttagtcaatttagtccctga 13536672  T
Q  189 atgcagattccgttagtcaatttag-tctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgatt 287  Q
    ||||||| |||||||||||||||||  |  |||||||||||||||||||||||||||||||||||||| |||||| | | |||| ||||| |    || |    
T  13536673 atgcagactccgttagtcaatttagccccctgaatgtagactctgttagtcactttagtccctgaaatggaccaatagagtctacattcagg----gact 13536768  T
Q  288 gttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatt 360  Q
    |||||||||||| |||| |||||| ||||||||||| ||||| |||| ||||  || ||||||||||||||||    
T  13536769 gttttgcaatttctctgtattcagagactaaagtgactactcctttctcattcaaggactaaagtgactaatt 13536841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 93 - 360
Target Start/End: Complemental strand, 19295543 - 19295280
Alignment:
Q  93 ctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgc 192  Q
    |||||||| ||||||||||| |||||||||| ||||| || ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  19295543 ctgaatagaaaaggagtcgttactttagtccctgaatgcagataaattacaaaatagtccctgaatgcagactctgttagtcaatttagtccctgaatgc 19295444  T
Q  193 agattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgtttt 292  Q
    ||| | | |||||||||||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||| |  ||| ||| | |    || ||||||    
T  19295443 agacttcattagtcaatttagtccctgaatgtagactccgttggtcactttagtccctgaaattgactaacatagcctatatttagg----gactgtttt 19295348  T
Q  293 gcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatt 360  Q
    ||||||| || |||||||||||||||||||| ||||| ||||| |||  || ||||||||||||||||    
T  19295347 gcaatttctcagcattcagggactaaagtgactactcctttcctattcaaggactaaagtgactaatt 19295280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 89 - 365
Target Start/End: Original strand, 25089165 - 25089437
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||| ||||||||| |||||||| ||||||||||  ||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||  |||    
T  25089165 gtccatgaataggagaggagtcgccactttagtctctgaatgcagataaattgcaaaatagtccctgaatgtagactctgttagtcaatttagtcattga 25089264  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattg 288  Q
    ||||||| ||| |||||||||||||||  ||||||||||||   |||||||||||||||| ||||||||||||||| | |||| |||| ||||   | ||    
T  25089265 atgcagactccattagtcaatttagtccctgaatgtagacttcattagtcactttagtccatgaaattgaccaacatagtctatattc-agga---actg 25089360  T
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatttccca 365  Q
    ||||||||||| ||||||||||| ||||||||||| || |||||  |||||   | |||||||||||||||| ||||    
T  25089361 ttttgcaatttctctgcattcagtgactaaagtgactattcattgtccattcagggactaaagtgactaattcccca 25089437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 102 - 321
Target Start/End: Original strand, 10862039 - 10862253
Alignment:
Q  102 aaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgt 201  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||  ||||||||||||||||||||||||||| |||| | |||||||| ||||| |||||    
T  10862039 aaaggagtcgtcactttagtccctgaatgcaaattaattgcaatgtagtccctgaatgtagactctgttagtcaattcaatccctgaaggcagactccgt 10862138  T
Q  202 tagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaattttt 301  Q
    ||||||||||||||  ||||| ||||||||||| |||||||||||||||||||||||||||  || |||| |||||  | |  | ||||||||||||| |    
T  10862139 tagtcaatttagtccctgaatatagactctgttcgtcactttagtccctgaaattgaccaa-taagtctacattca--gct--actgttttgcaatttct 10862233  T
Q  302 ctgcattcagggactaaagt 321  Q
    ||||||||||||||||||||    
T  10862234 ctgcattcagggactaaagt 10862253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 89 - 365
Target Start/End: Complemental strand, 10588137 - 10587881
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    ||||||||||||||||||||| ||||||| ||||| ||||| || ||||||||||||||||||| |||||||||||| | ||||| |||||||||| |||    
T  10588137 gtccctgaataggaaaggagttgtcacttaagtccatgaatgcagataaattgcaaaatagtccatgaatgtagactttattagtcaatttagtccttga 10588038  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattg 288  Q
    ||||||| ||||||||||||||||||                 ||||||||||||||||||||||||||| ||||| | |||| ||||| |    || ||    
T  10588037 atgcagactccgttagtcaatttagt----------------agttagtcactttagtccctgaaattgaacaacatagtctacattcagg----gactg 10587958  T
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatttccca 365  Q
    ||||||||||| ||||||||||||||||||||||| ||||| |||| ||||   | |||||||||||||||| ||||    
T  10587957 ttttgcaatttctctgcattcagggactaaagtgactactcctttctcattcatggactaaagtgactaattcccca 10587881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 89 - 365
Target Start/End: Complemental strand, 21222733 - 21222459
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaa--taaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccct 186  Q
    ||||||||||||||||| | ||||||||||||||| |||||  | |  ||||||||||||||||| ||||||||| ||| ||||||| || |||||| ||    
T  21222733 gtccctgaataggaaagaaatcgtcactttagtccctgaatgtatagataaattgcaaaatagtctctgaatgtatactatgttagtcaacttagtctct 21222634  T
Q  187 gaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgat 286  Q
    ||||||||| | |||||||||||||||||  ||||||||||||| ||||||||| ||| ||| |||||||||| |||| | ||||  ||||||    ||     
T  21222633 gaatgcagacttcgttagtcaatttagtccctgaatgtagactcagttagtcacattaatccttgaaattgactaacagagtctacgttcaag----gac 21222538  T
Q  287 tgttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatttccca 365  Q
    ||||||||||||| |||||||||| ||||| |||||| ||||| |||| ||||   | |||||||| ||||||| ||||    
T  21222537 tgttttgcaatttctctgcattcaaggacttaagtgactactcttttctcattcaggaactaaagttactaattcccca 21222459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 147 - 367
Target Start/End: Original strand, 26705099 - 26705315
Alignment:
Q  147 tagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagt 246  Q
    ||||||||||||| ||| |  |||| | ||||||||||||||||  ||| |||||||||||||||||||  ||||||||||  | |||||||||||||||    
T  26705099 tagtccctgaatgcagatttcgttaatcaatttagtccctgaatatagaatccgttagtcaatttagtccctgaatgtagaacccgttagtcactttagt 26705198  T
Q  247 ccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcac 346  Q
    |||||||||||||||||||  |||| ||||| |    || ||||||||||||| ||| ||||||||||||||||||| ||||| ||| |||||   | ||    
T  26705199 ccctgaaattgaccaacaacgtctacattcagg----gactgttttgcaatttctctacattcagggactaaagtgactactctttttccattcaggaac 26705294  T
Q  347 taaagtgactaatttcccatt 367  Q
    |||||||||||||| ||||||    
T  26705295 taaagtgactaattccccatt 26705315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 93 - 339
Target Start/End: Complemental strand, 10672879 - 10672638
Alignment:
Q  93 ctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgc 192  Q
    |||||||||||| ||||  | | ||||||| |||||| || ||||||||||||||||| |||||||||||| | ||||| | ||||||||| ||||||||    
T  10672879 ctgaataggaaatgagttattattttagtctttgaatgcagataaattgcaaaatagttcctgaatgtagatt-tgttaatcaatttagtctctgaatgc 10672781  T
Q  193 agattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgtttt 292  Q
    | ||| |||||||||||||||||  ||||||||||||  |||||||||| |||| ||||||||| ||||||| | |||| ||||| |    || ||||||    
T  10672780 atatttcgttagtcaatttagtccctgaatgtagacttcgttagtcactatagttcctgaaatttaccaacatagtctacattcagg----gactgtttt 10672685  T
Q  293 gcaatttttctgcattcagggactaaagtgagtactcatttcccatt 339  Q
      ||||||| |||||||   ||||||||||| |||||||||| ||||    
T  10672684 ataatttttatgcattcgaagactaaagtgactactcatttctcatt 10672638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 92 - 256
Target Start/End: Complemental strand, 12651345 - 12651182
Alignment:
Q  92 cctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatg 191  Q
    ||||||| ||||| || || |||||||| ||  ||||| || ||||||||| ||||| ||  ||||| ||||||| |||||| ||||| |||||||||||    
T  12651345 cctgaatgggaaatgaatcatcactttaatctgtgaatgcagataaattgctaaataatctttgaatatagactccgttagtcaatttggtccctgaatg 12651246  T
Q  192 cagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaatt 256  Q
    | || || ||||||||||||||||| || ||||||||| ||||||||||||||||| || |||||    
T  12651245 ccgactctgttagtcaatttagtctctg-atgtagactttgttagtcactttagtctctaaaatt 12651182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 26705089 - 26705173
Alignment:
Q  169 ttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaa 253  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||||||  ||||| |||| || |||||||| |||||||||||||    
T  26705089 ttagtcaatttagtccctgaatgcagatttcgttaatcaatttagtccctgaatatagaatccgttagtcaatttagtccctgaa 26705173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 10587912 - 10587981
Alignment:
Q  101 gaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgtt 170  Q
    ||||||||| ||||||||||||| ||||| || | ||||||||||| |||||||||||||||||| ||||    
T  10587912 gaaaggagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagactatgtt 10587981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 28752277 - 28752337
Alignment:
Q  111 gtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgtta 171  Q
    ||||||||||| | ||||| || ||||||||||||||||||| ||||||||||||||||||    
T  28752277 gtcactttagtacctgaatgcagataaattgcaaaatagtccatgaatgtagactctgtta 28752337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 179
Target Start/End: Original strand, 21222481 - 21222568
Alignment:
Q  92 cctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||||||  |||| |||| ||||||| ||||||||||| || | ||||||||||| ||||| |||| ||||||||||||||| |||||    
T  21222481 cctgaatgagaaaagagtagtcacttaagtccttgaatgcagagaaattgcaaaacagtccttgaacgtagactctgttagtcaattt 21222568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 13536815 - 13536749
Alignment:
Q  101 gaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactct 167  Q
    ||||||||| ||||||||||||  ||||| || | ||||||||||| ||||||||||||||||||||    
T  13536815 gaaaggagtagtcactttagtctctgaatacagagaaattgcaaaacagtccctgaatgtagactct 13536749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 19295294 - 19295384
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||| |||||||||||||||| ||||||||||||| ||||| |  | ||||||||||| ||||||| ||| ||| || ||||||| |||||    
T  19295294 gtccttgaataggaaaggagtagtcactttagtccctgaatgctgagaaattgcaaaacagtccctaaatataggctatgttagtcaattt 19295384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 26705291 - 26705219
Alignment:
Q  92 cctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagac 164  Q
    ||||||| | ||| |||| ||||||||||||| |||||  | | ||||||||||| |||||||||||||||||    
T  26705291 cctgaatggaaaaagagtagtcactttagtccctgaatgtagagaaattgcaaaacagtccctgaatgtagac 26705219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 10672632 - 10672721
Alignment:
Q  90 tccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||||||||  |||| |||| |||||||||||| | |||| || | |||||  |||| |||||||||||||||||| |||| || |||||    
T  10672632 tccctgaatgagaaatgagtagtcactttagtcttcgaatgcataaaaattataaaacagtccctgaatgtagactatgttggtaaattt 10672721  T

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Target: chr1 (Bit Score: 138; Significance: 1e-71; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 90 - 360
Target Start/End: Original strand, 50335455 - 50335721
Alignment:
Q  90 tccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaa 189  Q
    ||||||||||||||| |||||||||||||||||| ||||| || ||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||    
T  50335455 tccctgaataggaaatgagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccatgaatgtagactttgttagtcaatttagtccctgaa 50335554  T
Q  190 tgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgt 289  Q
    |||||| |||||| ||||||||||||  ||||||||||||| | || |||||||||||||| ||||||||||||| | |||| ||||| |    || |||    
T  50335555 tgcagactccgttcgtcaatttagtccctgaatgtagactccgctaatcactttagtccctaaaattgaccaacagagtctacattcagg----gactgt 50335650  T
Q  290 tttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatt 360  Q
    |||||||||| |||||||||||||| |||||||| ||||  ||| ||||| | | ||||||||||||||||    
T  50335651 tttgcaatttgtctgcattcagggattaaagtgactactttttttccattctgggactaaagtgactaatt 50335721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 89 - 358
Target Start/End: Original strand, 37607985 - 37608249
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||||||||||||||| || | |||| |||||||| ||||| || ||||||||||||||||||| |||||||||||||||||||| |||||||||| |||    
T  37607985 gtccctgaataggaaatgaattgtcattttagtccctgaatgcatataaattgcaaaatagtccttgaatgtagactctgttagtcaatttagtccttga 37608084  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattg 288  Q
    ||||||| || ||||||||||||||||  ||||||||||||| |||||||||||| ||||||||||||||||||| |  | || ||||| |    || ||    
T  37608085 atgcagactctgttagtcaatttagtccttgaatgtagactccgttagtcactttggtccctgaaattgaccaac-agttttacattcagg----gactg 37608179  T
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaa 358  Q
    ||||||||||| ||||||||||||||||||| ||| ||||| |||||||||  || ||||||||||||||    
T  37608180 ttttgcaatttctctgcattcagggactaaaatgactactcctttcccattcaaggactaaagtgactaa 37608249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 96 - 359
Target Start/End: Original strand, 13735465 - 13735723
Alignment:
Q  96 aataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcaga 195  Q
    |||||||||| ||||||||||||||||| ||||| || ||||||| ||||||||||||  |||||||||||||||||| ||||||||| |||||||||||    
T  13735465 aataggaaagaagtcgtcactttagtccctgaatgcagataaattacaaaatagtcccacaatgtagactctgttagtcaatttagtctctgaatgcaga 13735564  T
Q  196 ttccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattga-ccaacaaaatctaaattcaaggattgattgttttgc 294  Q
     ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||| | |||| | |||| ||||| |    || ||||||||    
T  13735565 ctccgttagtcaatttagtcaataaatgtagactccgttagtcactttagtccctgaaattgatcaaacagagtctacattcagg----gactgttttgc 13735660  T
Q  295 aatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaat 359  Q
    ||||| | ||||||||| ||||||| ||| ||||| ||||||||| ||  |||||||||||||||    
T  13735661 aatttctttgcattcagagactaaa-tgactactcctttcccatt-tatgactaaagtgactaat 13735723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 89 - 362
Target Start/End: Complemental strand, 8097981 - 8097712
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||||| ||||||||| ||||  |||||||||||| ||||| || ||||||  ||||||||||| ||||| |||| ||||||||| |||||||||| |||    
T  8097981 gtccctaaataggaaatgagttttcactttagtccctgaatgcagataaatcacaaaatagtccatgaatatagattctgttagtcaatttagtccttga 8097882  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattg 288  Q
    || || | ||| ||||||||||||||   |||||||||||||||||||||| |||||||| | ||||||||||||| | |||| ||| |  ||  || ||    
T  8097881 atacatactccattagtcaatttagttcctgaatgtagactctgttagtcattttagtccttaaaattgaccaacatagtctatattta--ga--gactg 8097786  T
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatttc 362  Q
    ||||||||||| |||||||| ||  |||||||||  |||| ||||| ||||     ||||||||||||||||||    
T  8097785 ttttgcaatttctctgcatttagaaactaaagtggctactaatttctcattcagagactaaagtgactaatttc 8097712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 32374203 - 32374092
Alignment:
Q  111 gtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatt 210  Q
    ||||||||||||| | ||| |||||||||||||||||||||| ||||||||       ||||| ||||||||||||||||||| | || |||||||||||    
T  32374203 gtcactttagtccctaaatgcaaataaattgcaaaatagtccatgaatgta-------ttagtcaatttagtccctgaatgcaaactctgttagtcaatt 32374111  T
Q  211 tagtctatgaatgtagact 229  Q
    |||||  ||||||||||||    
T  32374110 tagtccctgaatgtagact 32374092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 89 - 328
Target Start/End: Original strand, 42847038 - 42847266
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgt--tagttaatttagtccct 186  Q
    |||| |||||| ||||| |||| ||| |||||||| | ||| || |||||||| |||||| ||  |||||||||| | | |  |||| ||||||||  ||    
T  42847038 gtccttgaataagaaagaagtcctcattttagtccataaatgcagataaattgaaaaataatctttgaatgtagattatatgatagtcaatttagtatct 42847137  T
Q  187 gaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgat 286  Q
    ||||||| | || |||||||||||||||| || |||||||||||||||||||| |        ||||| |||| |||||| |||| |||||||    |||    
T  42847138 gaatgcaaactc-gttagtcaatttagtccataaatgtagactctgttagtcaat--------tgaaactgactaacaaagtctacattcaag----gat 42847224  T
Q  287 tgttttgcaatttttctgcattcagggactaaagtgagtact 328  Q
    ||||||||||||| |||||||||||||| |||||||| ||||    
T  42847225 tgttttgcaatttctctgcattcagggaataaagtgactact 42847266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 189
Target Start/End: Original strand, 11633212 - 11633307
Alignment:
Q  94 tgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaa 189  Q
    |||||||||||| |||||||||||| || ||||||  || |||||||| |||||||| | |||||||||| | ||||||| | |||||||| ||||    
T  11633212 tgaataggaaagaagtcgtcactttggttcttgaaagcagataaattgtaaaatagttcatgaatgtagattatgttagtcactttagtccttgaa 11633307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 13735700 - 13735631
Alignment:
Q  100 ggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgtt 170  Q
    |||||||||| |||| |||||||  ||||| |||| ||||||||||| |||||||||||||||||||||||    
T  13735700 ggaaaggagtagtca-tttagtctctgaatgcaaagaaattgcaaaacagtccctgaatgtagactctgtt 13735631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 37608237 - 37608165
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgta 161  Q
    |||| ||||| |||||||||| |||| |||||||| ||||| || | ||||||||||| ||||||||||||||    
T  37608237 gtccttgaatgggaaaggagtagtcattttagtccctgaatgcagagaaattgcaaaacagtccctgaatgta 37608165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 50335511 - 50335435
Alignment:
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatttccca 365  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||| |||   | | ||||||||||||| |||||    
T  50335511 ttttgcaatttatctgcattcagggactaaagtgacgactcatttcctattcagggattaaagtgactaatctccca 50335435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 50335685 - 50335617
Alignment:
Q  111 gtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    ||||||||| ||| ||||| || | ||||||||||| ||||||||||||||||||||||| || |||||    
T  50335685 gtcactttaatccctgaatgcagacaaattgcaaaacagtccctgaatgtagactctgttggtcaattt 50335617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 32373999 - 32374088
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    ||||||||||||||||| ||| ||||||||||||| || || || | || |||||||| ||| | |||||||||||| ||||||| |||||    
T  32373999 gtccctgaataggaaag-agtagtcactttagtccctggatgcatagaatttgcaaaacagttcttgaatgtagactgtgttagtcaattt 32374088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 11633271 - 11633316
Alignment:
Q  217 atgaatgtagactctgttagtcactttagtccctgaaattgaccaa 262  Q
    ||||||||||| | |||||||||||||||||| |||||||||||||    
T  11633271 atgaatgtagattatgttagtcactttagtccttgaaattgaccaa 11633316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 32374152 - 32374100
Alignment:
Q  201 ttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaa 253  Q
    |||||||||||||||  |||||| | ||||||||||||| |||||||||||||    
T  32374152 ttagtcaatttagtccctgaatgcaaactctgttagtcaatttagtccctgaa 32374100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 6e-70; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 89 - 360
Target Start/End: Complemental strand, 21944009 - 21943742
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||||||||||| ||| || |||||| ||||||| |||||| |||||||||||||||||||| | |||||||||||||||||| | ||||||||||||||    
T  21944009 gtccctgaatagaaaatgaatcgtcattttagtcattgaatgcaaataaattgcaaaatagttcatgaatgtagactctgttaatcaatttagtccctga 21943910  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattg 288  Q
    ||||| | |  ||||||||||||||||| |||||||||| | ||||| |||||||||||||| |||||||| |||||| |||| |||||||    |  ||    
T  21943909 atgcatactttgttagtcaatttagtctttgaatgtagattatgttaatcactttagtccctaaaattgactaacaaagtctacattcaag----gtctg 21943814  T
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatt 360  Q
    ||||||||||| |||||||||||| |||||||||| |||||||||||||||  || ||||||||||||||||    
T  21943813 ttttgcaatttctctgcattcaggtactaaagtgactactcatttcccattcaaggactaaagtgactaatt 21943742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 90 - 333
Target Start/End: Complemental strand, 10760272 - 10760034
Alignment:
Q  90 tccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaa 189  Q
    ||||||||||||||| ||| |||||||||||||  ||||| || ||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||    
T  10760272 tccctgaataggaaatgagccgtcactttagtctctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtaagtcaatttagtccctgaa 10760173  T
Q  190 tgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgt 289  Q
    |||||| |||||||||||||||||||  ||||||||||||| |||| ||| |||||||| ||||||||||||||||| | || ||||| |    || |||    
T  10760172 tgcagactccgttagtcaatttagtccctgaatgtagactccgttaatca-tttagtccttgaaattgaccaacaaagtttacattcagg----gactgt 10760078  T
Q  290 tttgcaatttttctgcattcagggactaaagtgagtactcattt 333  Q
    ||| |||||| ||| |||||||| |||||||||  |||||||||    
T  10760077 ttttcaatttctctacattcaggaactaaagtggctactcattt 10760034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 89 - 366
Target Start/End: Complemental strand, 13753495 - 13753222
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||||| |||||||||| |||||||| |||||||  ||||| || ||||||||||||||||||||| |||||||||||||| ||| |||||||||| | |    
T  13753495 gtccctaaataggaaagaagtcgtcattttagtctctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtaagtcaatttagtccttaa 13753396  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattg 288  Q
    ||||||| ||||||||||||||||| |  |||| ||||||||  | |||||||||||||||||||||||||||||| | |||| | |||  |||  | ||    
T  13753395 atgcagactccgttagtcaatttagcccctgaaagtagactccatcagtcactttagtccctgaaattgaccaacagagtctacactca--gat--actg 13753300  T
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatttcccat 366  Q
    ||||||||||| ||||||||||  ||||||||||| ||||||||| | |||   | |||||||||||||||| |||||    
T  13753299 ttttgcaatttctctgcattcaatgactaaagtgactactcattttctatttagggactaaagtgactaattccccat 13753222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 134 - 356
Target Start/End: Original strand, 17497053 - 17497271
Alignment:
Q  134 ataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgt 233  Q
    ||||||||||||||||||| ||||||||| |||||||||| |||||||||| ||||||||||||| |||||| |||||||||  ||||||||||||| ||    
T  17497053 ataaattgcaaaatagtccgtgaatgtagtctctgttagtcaatttagtccttgaatgcagattctgttagttaatttagtccctgaatgtagactccgt 17497152  T
Q  234 tagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcattcagggactaaagtgagtactcattt 333  Q
      ||||||||||||||||||||||||||||||| |||| ||||| |    || | ||||||||||| ||||||||||||||||||| ||| |||||||||    
T  17497153 cggtcactttagtccctgaaattgaccaacaaagtctacattcagg----gactattttgcaatttctctgcattcagggactaaaatgactactcattt 17497248  T
Q  334 cccattgtagcactaaagtgact 356  Q
    | ||||   | ||||||||||||    
T  17497249 ctcattcacggactaaagtgact 17497271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 93 - 365
Target Start/End: Original strand, 2555456 - 2555724
Alignment:
Q  93 ctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgc 192  Q
    |||| ||||||| ||||||| |||||||||| ||||| |||||| |||||||||||||| ||||||||||||||||||||| |||||||||  |||||||    
T  2555456 ctgagtaggaaatgagtcgtaactttagtccctgaatacaaatatattgcaaaatagtctctgaatgtagactctgttagtcaatttagtcgttgaatgc 2555555  T
Q  193 agattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgtttt 292  Q
    ||| | |||||||||| ||||||  |||| |||||||  ||||||||||||| ||||||||||||||||||  | |||| ||||| |    || ||||||    
T  2555556 agacttcgttagtcaaattagtccctgaacgtagacttcgttagtcactttaatccctgaaattgaccaacgcagtctacattcagg----gactgtttt 2555651  T
Q  293 gcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatttccca 365  Q
    |||||||||||||||| || ||||||||| | || | ||||||||||   | ||||| |||||||||| ||||    
T  2555652 gcaatttttctgcatttagagactaaagtaactaattatttcccattcagggactaacgtgactaattcccca 2555724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 134 - 360
Target Start/End: Complemental strand, 30100832 - 30100613
Alignment:
Q  134 ataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgt 233  Q
    ||||||||||||||||||| |||||| ||||||||||| | | ||||||||||||||||||| ||| ||||||||| |||||  ||||||||||||||||    
T  30100832 ataaattgcaaaatagtccatgaatgcagactctgttaatcactttagtccctgaatgcagactccattagtcaatatagtccctgaatgtagactctgt 30100733  T
Q  234 tagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcattcagggactaaagtgagtactcattt 333  Q
    | ||||||||||||||||||||||   || ||| |||| |||||||    |||||||||||||||| |||||||| ||||| |||||||| ||||| |||    
T  30100732 ttgtcactttagtccctgaaattg---aataaagtctacattcaag----gattgttttgcaatttctctgcatttagggattaaagtgactactctttt 30100640  T
Q  334 cccattgtagcactaaagtgactaatt 360  Q
    | || |   | ||||||||||||||||    
T  30100639 ctcacttagggactaaagtgactaatt 30100613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 172 - 357
Target Start/End: Complemental strand, 21211599 - 21211419
Alignment:
Q  172 gttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatcta 271  Q
    ||||||||||| | ||||||||||| |||||||| |||||||||| |||||||||| |  ||||||||||||||| ||||||||||||||||||| ||||    
T  21211599 gttaatttagttcatgaatgcagat-ccgttagttaatttagtctctgaatgtagattgcgttagtcactttagttcctgaaattgaccaacaaagtcta 21211501  T
Q  272 aattcaaggattgattgttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgacta 357  Q
     |||||  ||  || ||||||||||||||||||||||||||||||||||||| |||||||||||||||   | |||||||||||||    
T  21211500 cattca--ga--gactgttttgcaatttttctgcattcagggactaaagtgactactcatttcccattcagggactaaagtgacta 21211419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 93 - 277
Target Start/End: Original strand, 34419497 - 34419681
Alignment:
Q  93 ctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgc 192  Q
    |||||||| |||||||||||||||||| ||   |||| || ||||||||||||||||||||||||||||   ||||||||| |||||||||  | || ||    
T  34419497 ctgaatagaaaaggagtcgtcactttaatctcagaatgcagataaattgcaaaatagtccctgaatgtaagttctgttagtcaatttagtcgataaaagc 34419596  T
Q  193 agattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattca 277  Q
    ||| | |||||||||||||||||  | ||||||||||||||| |||| |||||||||||||||||||||||||| |||| |||||    
T  34419597 agacttcgttagtcaatttagtccttaaatgtagactctgttggtcattttagtccctgaaattgaccaacaaagtctacattca 34419681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 89 - 264
Target Start/End: Original strand, 30852599 - 30852767
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||| |||||||||||  ||||||||||||||||| ||||| || |||||       ||||| |||||||||| ||||||||||| ||||||||||||||    
T  30852599 gtccttgaataggaaataagtcgtcactttagtccctgaatacagataaa-------atagttcctgaatgtaaactctgttagtcaatttagtccctga 30852691  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaaca 264  Q
    ||||||| | ||| |||||||||||||| |||||||||| || ||||||||||||||| | |||||||||||||||    
T  30852692 atgcagacttcgtaagtcaatttagtctctgaatgtagattccgttagtcactttagttcatgaaattgaccaaca 30852767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 97 - 358
Target Start/End: Complemental strand, 20430131 - 20429878
Alignment:
Q  97 ataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagat 196  Q
    |||||||| ||||||| | ||||||||| ||||    |||||||||||||||||   ||||| ||||||| |||||| |||||||| | ||||||||||     
T  20430131 ataggaaacgagtcgtgattttagtcctcgaat----ataaattgcaaaatagtttttgaatatagactccgttagtcaatttagttcatgaatgcagac 20430036  T
Q  197 tccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaa 296  Q
    || |||||| |||||||| | |||||||| |||||||| ||||||||||||| ||||||||||||||| | |||| ||||||     || ||||||||||    
T  20430035 tctgttagttaatttagtttttgaatgtaaactctgttcgtcactttagtccttgaaattgaccaacagagtctacattcaa----agactgttttgcaa 20429940  T
Q  297 tttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaa 358  Q
    ||| ||||||| ||| | |||||| || ||||| |||| ||||   | ||||||||||||||    
T  20429939 tttctctgcatccagaggctaaagcgactactcctttcacattcagggactaaagtgactaa 20429878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 89 - 359
Target Start/End: Original strand, 19491685 - 19491951
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    ||||||||||||||||| | |  |||||||||||  ||||| || |||||||||||||||||   |||||||| ||| ||||||| || |||||  ||||    
T  19491685 gtccctgaataggaaagaaattatcactttagtctatgaatgcagataaattgcaaaatagtttatgaatgtatactatgttagtcaacttagtatctga 19491784  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattg 288  Q
    ||||||| | ||||| |||||||||||  ||||| ||||||| ||||||||| ||| ||| |||||||||| |||| | ||||  ||||||     | ||    
T  19491785 atgcagacttcgttaatcaatttagtccctgaatttagactcagttagtcacattaatccttgaaattgactaacagagtctacgttcaag----cactg 19491880  T
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaat 359  Q
    ||||||||||| |||||||||| ||||| |||||| ||||| |||| ||||   | |||||||||||||||    
T  19491881 ttttgcaatttctctgcattcaaggacttaagtgactactcttttctcattcaggaactaaagtgactaat 19491951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 90 - 258
Target Start/End: Complemental strand, 19564920 - 19564752
Alignment:
Q  90 tccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaa 189  Q
    ||||| |||||||||  |||||||||||||||||||||||  | |||||||||||||||||   |||||||| |||  |||||| |||||| ||| |||     
T  19564920 tccctaaataggaaatcagtcgtcactttagtccttgaatggagataaattgcaaaatagtttttgaatgtaaacttcgttagtcaatttattccttgat 19564821  T
Q  190 tgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattga 258  Q
    | || | |||||||||||||||||||| |||||||||||||  ||| ||||||||||||||||||||||    
T  19564820 tccatactccgttagtcaatttagtctctgaatgtagactccattaatcactttagtccctgaaattga 19564752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 93 - 360
Target Start/End: Complemental strand, 31912458 - 31912195
Alignment:
Q  93 ctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgc 192  Q
    ||||||||||||| |||||||| |||||||| | |||  |||||||||| |||||| | | |||||||||| | ||||  |  ||||||||| ||||| |    
T  31912458 ctgaataggaaagaagtcgtcattttagtccataaatgtaaataaattgtaaaataattcttgaatgtagattatgttgatcgatttagtccttgaatac 31912359  T
Q  193 agattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgtttt 292  Q
    ||| |||||||||||||||||||  | | ||||||||||||||||||||||||||| |||||||||| |||    ||||  || ||    ||| ||||||    
T  31912358 agactccgttagtcaatttagtcatttactgtagactctgttagtcactttagtccatgaaattgactaacgttgtctacgttaaa----tgactgtttt 31912263  T
Q  293 gcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatt 360  Q
     |||| | |||||||||||||| |||| ||| || || |||||||||  || ||||||||||||||||    
T  31912262 acaatgtctctgcattcagggattaaaatgactattcttttcccattcaaggactaaagtgactaatt 31912195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 134 - 281
Target Start/End: Original strand, 11298017 - 11298164
Alignment:
Q  134 ataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgt 233  Q
    ||||||||||||||| ||||||||  |||||||||||||| ||||||||| ||||||||||| ||| ||||||||||||||   ||||||||||||||||    
T  11298017 ataaattgcaaaataatccctgaacatagactctgttagtcaatttagtctctgaatgcagactccattagtcaatttagttcctgaatgtagactctgt 11298116  T
Q  234 tagtcactttagtccctgaaattgaccaacaaaatctaaattcaagga 281  Q
    || |||||||| ||  | |||||||| |||||| |||  |||||||||    
T  11298117 taatcactttaatctttaaaattgactaacaaagtcttcattcaagga 11298164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 134 - 311
Target Start/End: Original strand, 12895586 - 12895757
Alignment:
Q  134 ataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgt 233  Q
    |||||||  ||||||||| | ||||||||||| ||||||| |||||| ||| | |||||||| || ||||||||||||||| ||| ||||||||||  ||    
T  12895586 ataaattaaaaaatagtctccgaatgtagactttgttagtcaatttaatccttaaatgcagactctgttagtcaatttagt-tataaatgtagacttcgt 12895684  T
Q  234 tagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcattcag 311  Q
    || | |||||||| ||| ||| |||||||||||||||| ||||||     || ||||||||||||| |||||||||||    
T  12895685 taattactttagtacct-aaaatgaccaacaaaatctacattcaa----cgactgttttgcaatttctctgcattcag 12895757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 21211430 - 21211520
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||||||||| ||||| |||| ||||||||||||| ||||| || | ||||||||||| |||| ||||||||||||| |||| || |||||    
T  21211430 gtccctgaatgggaaatgagtagtcactttagtccctgaatgcagaaaaattgcaaaacagtctctgaatgtagactttgttggtcaattt 21211520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 179
Target Start/End: Complemental strand, 17497249 - 17497171
Alignment:
Q  101 gaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||| |||| |||| |||||||| ||||| || | |||||||||||||||||||||||||||||| |||| || |||||    
T  17497249 gaaatgagtagtcattttagtccctgaatgcagagaaattgcaaaatagtccctgaatgtagactttgttggtcaattt 17497171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 185 - 258
Target Start/End: Complemental strand, 32539437 - 32539365
Alignment:
Q  185 ctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattga 258  Q
    ||||||||| | | ||||||||||||||||   |||||||||||| |||||||||||||||| |||||||||||    
T  32539437 ctgaatgcatacttcgttagtcaatttagttcttgaatgtagactatgttagtcactttagt-cctgaaattga 32539365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 19491935 - 19491848
Alignment:
Q  92 cctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||||||  |||| |||| ||||||| ||||||||||| || | ||||||||||| ||| | |||| ||||||||||||||| |||||    
T  19491935 cctgaatgagaaaagagtagtcacttaagtccttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtcaattt 19491848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 21211658 - 21211603
Alignment:
Q  96 aataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtc 151  Q
    ||||||||||| || ||||||||||||| ||||| || ||||||||||||||||||    
T  21211658 aataggaaaggggtggtcactttagtccctgaatgcagataaattgcaaaatagtc 21211603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 13753242 - 13753332
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||||| ||||| ||| |||| |||||||||||| |||||| || | ||||||||||| |||  |||| ||||||||||||| || |||||    
T  13753242 gtccctaaatagaaaatgagtagtcactttagtcattgaatgcagagaaattgcaaaacagtatctgagtgtagactctgttggtcaattt 13753332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 21943756 - 21943846
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||| ||||| ||||| |||| ||||||||||| | ||||| || | ||||||||||| || || |||||||||||| ||||||| |||||    
T  21943756 gtccttgaatgggaaatgagtagtcactttagtacctgaatgcagagaaattgcaaaacagaccttgaatgtagactttgttagtcaattt 21943846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 323
Target Start/End: Original strand, 43548870 - 43549015
Alignment:
Q  177 tttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcact---ttagtccctgaaattgaccaacaaaatctaaa 273  Q
    |||||||| |||||||||| || ||||||||||||||  | | |||||||| | | |||||||||   ||||| ||| ||||||||||||| | |||| |    
T  43548870 tttagtccatgaatgcagactctgttagtcaatttagcatctaaatgtagatttttttagtcacttaattagttcctaaaattgaccaacatagtctaca 43548969  T
Q  274 ttcaaggattgattgttttgcaatttttctgcattcagggactaaagtga 323  Q
    |||    ||  | ||||||||||||| |||||| ||| ||||||||||||    
T  43548970 ttc----atgtactgttttgcaatttctctgcaatcaaggactaaagtga 43549015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 364
Target Start/End: Original strand, 34419676 - 34419735
Alignment:
Q  305 cattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatttccc 364  Q
    ||||||||||||||||||| ||||| |||| ||||  || | ||||||||||||||||||    
T  34419676 cattcagggactaaagtgactactcctttctcattcaaggattaaagtgactaatttccc 34419735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 214
Target Start/End: Complemental strand, 21211572 - 21211526
Alignment:
Q  168 gttagttaatttagtccctgaatgcagattccgttagtcaatttagt 214  Q
    |||||||||||||||| ||||||| ||||| ||||||||| ||||||    
T  21211572 gttagttaatttagtctctgaatgtagattgcgttagtcactttagt 21211526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 323
Target Start/End: Original strand, 21211608 - 21211642
Alignment:
Q  289 ttttgcaatttttctgcattcagggactaaagtga 323  Q
    ||||||||||| |||||||||||||||||||||||    
T  21211608 ttttgcaatttatctgcattcagggactaaagtga 21211642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 2e-63; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 95 - 360
Target Start/End: Original strand, 22092879 - 22093140
Alignment:
Q  95 gaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcag 194  Q
    ||||||||||||||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||||||| | |||||| |||||||||||    
T  22092879 gaataggaaaggagtcgtcactttagtccttgattgcagataaattgtaaaatagtccctgaatgtagactctgttagtcagtttagttcctgaatgcag 22092978  T
Q  195 attccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgc 294  Q
    | ||| || ||||||||||||  ||||| ||||||| ||| |||||||||||||||||| |||||||||| |||||| |||||  ||  || ||||||||    
T  22092979 actccattcgtcaatttagtccctgaatatagactccgtttgtcactttagtccctgaatttgaccaacagaatctacattca--ga--gactgttttgc 22093074  T
Q  295 aatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatt 360  Q
    ||||| ||| ||||||||||||||||| | || |||||| |||||   | |||||||||| |||||    
T  22093075 aatttctctacattcagggactaaagtaactaatcattttccattcaggaactaaagtgattaatt 22093140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 89 - 323
Target Start/End: Complemental strand, 24007146 - 24006916
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||| ||| ||||||| ||||||| |||||||||||||||| || |||||||| ||||||| |  |||||||||||||||||||| |||||||||| |||    
T  24007146 gtccttgactaggaaatgagtcgttactttagtccttgaatacagataaattgtaaaatagactttgaatgtagactctgttagtcaatttagtccatga 24007047  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattg 288  Q
    ||||||||||||||  ||||| ||||   |||||||||||||||||| ||| ||||||| ||||||||||  |||| | |||| ||||| |    || ||    
T  24007046 atgcagattccgttgatcaatgtagtacctgaatgtagactctgttaatcattttagtctctgaaattgagtaacagagtctacattcagg----gactg 24006951  T
Q  289 ttttgcaatttttctgcattcagggactaaagtga 323  Q
    ||||||||||| |||||||||||||||||||||||    
T  24006950 ttttgcaatttctctgcattcagggactaaagtga 24006916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 89 - 279
Target Start/End: Complemental strand, 39598773 - 39598583
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||||| |||||||||| | |  ||| |||||||  ||||| || |||||||||||||||||||||||||||||||| |||| || ||||||||| ||||    
T  39598773 gtccctcaataggaaagaaattttcattttagtcactgaatgcagataaattgcaaaatagtccctgaatgtagactttgttggtcaatttagtcgctga 39598674  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaag 279  Q
    ||| | | |||||||||||||||||||  ||||||||||||| ||||||||||||||||||| |||||||| |||||| |||| |||||||    
T  39598673 atgtatactccgttagtcaatttagtccctgaatgtagactccgttagtcactttagtccctaaaattgactaacaaagtctacattcaag 39598583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 95 - 277
Target Start/End: Original strand, 31819933 - 31820115
Alignment:
Q  95 gaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcag 194  Q
    ||||||||||||| |||||| |||||||| | ||| || |||||||| ||||||||| |||||||||||||||||||||  ||||||||| |||||||||    
T  31819933 gaataggaaaggaatcgtcattttagtccctaaatgcagataaattggaaaatagtcactgaatgtagactctgttagtccatttagtccttgaatgcag 31820032  T
Q  195 attccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattca 277  Q
    | |   |||||||||||||||| |||||||| |||| |||| |||||||||||||| |||||||| |||| |||||| |||||    
T  31820033 actttcttagtcaatttagtctctgaatgtatactccgttaatcactttagtccctaaaattgactaacagaatctacattca 31820115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 111 - 271
Target Start/End: Complemental strand, 31499594 - 31499434
Alignment:
Q  111 gtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatt 210  Q
    ||||||||| || ||||||  | |||||||| ||||||||||||||||||||| ||||||||| | ||||||  ||||||||||| ||||||||||||||    
T  31499594 gtcactttaatctttgaatgtagataaattgtaaaatagtccctgaatgtagaatctgttagtcattttagtttctgaatgcagactccgttagtcaatt 31499495  T
Q  211 tagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatcta 271  Q
    |||||  |||||||||||| | || |||||||| |||||||||||||||||||||||||||    
T  31499494 tagtccttgaatgtagactttatttgtcactttggtccctgaaattgaccaacaaaatcta 31499434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 179 - 360
Target Start/End: Complemental strand, 32092935 - 32092758
Alignment:
Q  179 tagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaa 278  Q
    ||||||||||||| ||| || ||||||||||||||||  ||||||||||||  ||||||||||||||| ||||| |||||| |||| | |||| |||||     
T  32092935 tagtccctgaatgtagactctgttagtcaatttagtccctgaatgtagacttcgttagtcactttagttcctgagattgacaaacagagtctacattcag 32092836  T
Q  279 ggattgattgttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatt 360  Q
    |    || ||||||||||||| ||||||||||||||||||||||| |||||||||||||||   | ||||||||||||||||    
T  32092835 g----gactgttttgcaatttctctgcattcagggactaaagtgactactcatttcccattcagggactaaagtgactaatt 32092758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 32092971 - 32092868
Alignment:
Q  111 gtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatt 210  Q
    ||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||||||| ||    
T  32092971 gtcactttagtccctgaatgcagataaattgaaaaatagtccctgaatgtagactctgttagtcaatttagtccctgaatgtagacttcgttagtcactt 32092872  T
Q  211 tagt 214  Q
    ||||    
T  32092871 tagt 32092868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 96 - 241
Target Start/End: Original strand, 8219160 - 8219304
Alignment:
Q  96 aataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcaga 195  Q
    ||||||||| || |||||| |||| | ||| | | ||||||||||| |||||||||  |||||||||||||||||||| ||||||||  |||||||||||    
T  8219160 aataggaaatgaatcgtcattttaattcttaagtgcaaataaattgtaaaatagtct-tgaatgtagactctgttagtcaatttagtttctgaatgcaga 8219258  T
Q  196 ttccgttagtcaatttagtctatgaatgtagactctgttagtcact 241  Q
     |||||||||||||||| ||  ||||||| ||||| ||||||||||    
T  8219259 ctccgttagtcaatttaatccctgaatgtggactccgttagtcact 8219304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 32092772 - 32092853
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgtt 170  Q
    |||||||||| ||||| |||| ||||||||||||| ||||| || | ||||||||||| |||||||||||||||||||||||    
T  32092772 gtccctgaatgggaaatgagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagactctgtt 32092853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 24006915 - 24006975
Alignment:
Q  111 gtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgtta 171  Q
    ||||||||||||| ||||| || | ||||||||||| ||||||||||||||||||||||||    
T  24006915 gtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagactctgtta 24006975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 212
Target Start/End: Original strand, 17914060 - 17914141
Alignment:
Q  131 caaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaattta 212  Q
    |||||||||||||||||| ||| |||||||||| | ||||||| ||||||| |||| |||| |||||  |||||||| ||||    
T  17914060 caaataaattgcaaaataatccttgaatgtagattttgttagtcaatttagaccctaaatgtagattttgttagtcacttta 17914141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 8219217 - 8219284
Alignment:
Q  186 tgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaa 253  Q
    |||||| ||| || ||||||||||||||| | |||||| |||||| |||||||| |||| ||||||||    
T  8219217 tgaatgtagactctgttagtcaatttagtttctgaatgcagactccgttagtcaatttaatccctgaa 8219284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 111; Significance: 1e-55; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 96 - 319
Target Start/End: Original strand, 23912 - 24131
Alignment:
Q  96 aataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcaga 195  Q
    ||||||||| |||||||| |||||||||||||||  | |||||||||||||| ||||| |||||||||||  |||||| |||||||||||||||||||||    
T  23912 aataggaaatgagtcgtccctttagtccttgaatatagataaattgcaaaatggtccccgaatgtagactacgttagtcaatttagtccctgaatgcaga 24011  T
Q  196 ttccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgca 295  Q
     || ||| ||||||||||||  |||||||||||| | || |||||||| |||| ||||||||||||||| |||||| ||||| |    ||||||||||||    
T  24012 ctctgttggtcaatttagtccttgaatgtagactttattcgtcacttttgtccatgaaattgaccaacagaatctacattcagg----gattgttttgca 24107  T
Q  296 atttttctgcattcagggactaaa 319  Q
    |||| |||||||||||||||||||    
T  24108 atttctctgcattcagggactaaa 24131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 3e-50; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 89 - 339
Target Start/End: Complemental strand, 25149504 - 25149258
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||||||||||||||| ||||||||||| |||||  ||||| || ||||| ||||||||| || ||||||||||||| ||||||| ||||||||| ||||    
T  25149504 gtccctgaataggaaatgagtcgtcactatagtctctgaatgcagataaactgcaaaataatctctgaatgtagactttgttagtcaatttagtctctga 25149405  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattg 288  Q
    ||||||| || ||||||||| ||||||  |||| |||||| | ||| ||||||||||||| ||||||||||||||| | |||| ||||| |    || ||    
T  25149404 atgcagactctgttagtcaagttagtccctgaacgtagacaccgttcgtcactttagtccttgaaattgaccaacagagtctacattcagg----gactg 25149309  T
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccatt 339  Q
    ||||||||||| | |||||||||||| |||||||| ||||| ||| |||||    
T  25149308 ttttgcaatttctttgcattcagggattaaagtgactactctttttccatt 25149258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 94 - 323
Target Start/End: Original strand, 35202616 - 35202842
Alignment:
Q  94 tgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgca 193  Q
    |||||||||||| |||  ||| |||||||| ||||| ||||||||||||||||| |||| | |||||||||| ||||||| |||||||| ||||||||||    
T  35202616 tgaataggaaagaagttatcattttagtccctgaatgcaaataaattgcaaaatggtccttaaatgtagactatgttagtcaatttagttcctgaatgca 35202715  T
Q  194 gattccgttagtcaatttagt-ctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgtttt 292  Q
    ||||| ||||||||||||||| |  ||||||||||||| ||||||||||||||| ||||||||||||||||| | |  | ||||| |    || ||||||    
T  35202716 gattctgttagtcaatttagtcccctgaatgtagactccgttagtcactttagttcctgaaattgaccaacagagtaaacattcagg----gactgtttt 35202811  T
Q  293 gcaatttttctgcattcagggactaaagtga 323  Q
    ||||||| |||||||||||| ||||||||||    
T  35202812 gcaatttctctgcattcaggaactaaagtga 35202842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 96 - 360
Target Start/End: Complemental strand, 23976349 - 23976089
Alignment:
Q  96 aataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcaga 195  Q
    |||| |||| ||||||||| |||||| | |||||  | |||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  23976349 aataagaaatgagtcgtcattttagttcctgaatgtagataaattgtaaaatagtccctgaatgtag-ctctgttagtcaatttagcccctgaatgcaga 23976251  T
Q  196 ttccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgca 295  Q
     |||||| |||||||||| |  ||||||||||   |||||||||||||| |||||||||||||| |||| | |||| ||||| |    || |||||||||    
T  23976250 ctccgttggtcaatttagcccctgaatgtagatcatgttagtcactttactccctgaaattgactaacagagtctacattcagg----gactgttttgca 23976155  T
Q  296 atttttctgcattcagggactaaagtgagtac-tcatttcccattgtagcactaaagtgactaatt 360  Q
    |||| |||||||||||| |||||||||| ||| || ||| |||||  || ||||||||||||||||    
T  23976154 atttctctgcattcaggaactaaagtgactacttctttttccattcaaggactaaagtgactaatt 23976089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 108 - 319
Target Start/End: Original strand, 18324029 - 18324236
Alignment:
Q  108 gtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtca 207  Q
    ||||||| |||||| | ||||| || |||||||| ||||||||||||||||||||||| | ||||| |||||||| |||||||||| | |||||||||||    
T  18324029 gtcgtcattttagttcatgaatgcagataaattgtaaaatagtccctgaatgtagactttattagtcaatttagttcctgaatgcaaactccgttagtca 18324128  T
Q  208 atttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcat 307  Q
    ||||||||  | ||||||||||| ||||||||||||||| | |||||||||||| || | || | ||||    || || ||||||||||||| |||||||    
T  18324129 atttagtccttaaatgtagactccgttagtcactttagttcatgaaattgaccagcagagtcgacattc----atggactgttttgcaatttctctgcat 18324224  T
Q  308 tcagggactaaa 319  Q
    ||||||||||||    
T  18324225 tcagggactaaa 18324236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 89 - 262
Target Start/End: Complemental strand, 37544058 - 37543885
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    ||||||||||| ||||| ||||| || |||||||| |||||  | ||||||||||||||||||  ||| |||||||| ||||||| |||||| |||||||    
T  37544058 gtccctgaatatgaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtcaatttaatccctga 37543959  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaa 262  Q
    ||||||||||||||||| |||||||||  ||||| ||||||| |||| |||||||||||| |||||||||||||    
T  37543958 atgcagattccgttagttaatttagtccctgaatatagactccgttaatcactttagtccatgaaattgaccaa 37543885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 89 - 249
Target Start/End: Original strand, 21124340 - 21124500
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||||||||||||||||||| |||||||||||||  ||||| || |||||||||||||||||| || |||||||||||| ||||| ||||||||||||||    
T  21124340 gtccctgaataggaaaggagacgtcactttagtctctgaatacagataaattgcaaaatagtctctaaatgtagactctattagtcaatttagtccctga 21124439  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccc 249  Q
    ||||||| | |||||||||||||||||    | ||||||||| |||||||| |||||||||    
T  21124440 atgcagacttcgttagtcaatttagtcccctagtgtagactccgttagtcaatttagtccc 21124500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 94 - 360
Target Start/End: Complemental strand, 22469693 - 22469432
Alignment:
Q  94 tgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgca 193  Q
    |||||| |||| |||||||||||||||||||| ||| || |||||||| |||||||| || ||||||||| ||||||||| |||||| ||||||||| ||    
T  22469693 tgaataagaaatgagtcgtcactttagtccttaaatgcagataaattgtaaaatagttccagaatgtagattctgttagtcaatttaatccctgaattca 22469594  T
Q  194 gattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttg 293  Q
     | ||| |||||||||||||||  ||||| || |||| ||||||||| ||| ||||||||||||||||||| | |||  ||||| |    || |||||||    
T  22469593 aactccattagtcaatttagtccctgaat-taaactccgttagtcaccttaatccctgaaattgaccaacagagtctgcattcagg----gactgttttg 22469499  T
Q  294 caatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatt 360  Q
    |||||| ||| |||||||| || ||||||  ||||| |||||||||   | | ||||||||||||||    
T  22469498 caatttctctacattcaggaacgaaagtggctactcctttcccattcagggattaaagtgactaatt 22469432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 89 - 259
Target Start/End: Complemental strand, 4289191 - 4289021
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||| ||||||| |||| |||||||| ||||||||  |||| || |||| |||||||||||||  |||| | ||||| ||||||| ||||||||| || |    
T  4289191 gtccttgaatagaaaagaagtcgtcattttagtccacgaatgcagataagttgcaaaatagtctttgaacgcagactatgttagtcaatttagtctctaa 4289092  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgac 259  Q
    ||||||| |  |||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  4289091 atgcagactatgttaatcaatttagtctttgaatgtagactctgttagtcactttaatccctgaaattgac 4289021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 96 - 215
Target Start/End: Complemental strand, 12107094 - 12106975
Alignment:
Q  96 aataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcaga 195  Q
    |||||||||| ||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||| |||| ||||||||| |||| |||    
T  12107094 aataggaaagaagtcgtcactttagtccttgaatgcagataaattgcaaaataatccctgaatgtagactctgttaattaaattagtccctaaatgtaga 12106995  T
Q  196 ttccgttagtcaatttagtc 215  Q
     | |||| |||| |||||||    
T  12106994 ctgcgttcgtcactttagtc 12106975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 134 - 259
Target Start/End: Complemental strand, 41358903 - 41358778
Alignment:
Q  134 ataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgt 233  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||| |   || || | ||| |||| |||||||||||| |||    
T  41358903 ataaattgcaaaatagtccctgaatgtagactctgttaatcaatttagtccatgaatgcagactttatttgttacttttgtctctgaatgtagactttgt 41358804  T
Q  234 tagtcactttagtccctgaaattgac 259  Q
    |||||||||||||| |||||||||||    
T  41358803 tagtcactttagtctctgaaattgac 41358778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 147 - 360
Target Start/End: Original strand, 21124430 - 21124639
Alignment:
Q  147 tagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagt 246  Q
    ||||||||||||| |||||  |||||| |||||||||||  | || ||| |||||||||||||||||||    | ||||||||| ||||| |||||||||    
T  21124430 tagtccctgaatgcagacttcgttagtcaatttagtcccctagtgtagactccgttagtcaatttagtcccctagtgtagactccgttagccactttagt 21124529  T
Q  247 ccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcac 346  Q
    || | ||||||||||||| | |||| ||||||||| ||    ||||||||||| ||| |||||||| | |||||||| ||||| |||| ||||  || ||    
T  21124530 ccataaaattgaccaacagagtctacattcaaggactg----ttttgcaatttctctacattcaggaattaaagtgactactcctttctcattcaagaac 21124625  T
Q  347 taaagtgactaatt 360  Q
    ||||||||||||||    
T  21124626 taaagtgactaatt 21124639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 89 - 225
Target Start/End: Original strand, 22426860 - 22426995
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||||||||||||||| ||||| |||||||||||| ||||| | | |||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  22426860 gtccctgaataggaaacgagtcatcactttagtccatgaatgcga-taaattgcaaaatagtccctgaatgtagtctctgttagtcaatttagtccctga 22426958  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgta 225  Q
    ||| ||  ||  ||||||||||| |||  ||||||||    
T  22426959 atgtagtctcttttagtcaatttggtccctgaatgta 22426995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 89 - 277
Target Start/End: Complemental strand, 24609292 - 24609104
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||||| ||||||||||||||| |||||||||| | ||||| ||||||||||| |||||||| | || ||||||  ||||||||| |||||||| | | |    
T  24609292 gtccctaaataggaaaggagtcttcactttagttcctgaatgcaaataaattgtaaaatagttcttggatgtaggttctgttagtcaatttagttcttaa 24609193  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattca 277  Q
    ||||||| || |||| | |||||||||| |||||||||||||  |||||| ||||| || || ||| | ||||||| |||||| |||||    
T  24609192 atgcagactctgttaattaatttagtctctgaatgtagactcaattagtcgctttaatctctaaaaattaccaacataatctacattca 24609104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 182 - 365
Target Start/End: Complemental strand, 12107040 - 12106861
Alignment:
Q  182 tccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaagga 281  Q
    |||||||||| ||| || |||| | || ||||||  | ||||||||||  ||| ||||||||||||||||||||||||||||| | |||| || || |||    
T  12107040 tccctgaatgtagactctgttaattaaattagtccctaaatgtagactgcgttcgtcactttagtccctgaaattgaccaacagagtctacatccaggga 12106941  T
Q  282 ttgattgttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatttccca 365  Q
     ||    ||||||||||| ||||||||||||||||||||||| |||||||||||||||   | |||||||||||||||| ||||    
T  12106940 ctg----ttttgcaatttctctgcattcagggactaaagtgactactcatttcccattcagggactaaagtgactaattcccca 12106861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 92 - 281
Target Start/End: Complemental strand, 22326669 - 22326480
Alignment:
Q  92 cctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatg 191  Q
    ||||||||| | | ||| || ||||||||||||||||| || |||||||| |||||| ||| | ||| |||| | ||||| | ||||||||| |||||||    
T  22326669 cctgaatagaatatgaggcgccactttagtccttgaatgcagataaattgtaaaataatccttaaatatagattttgttaatcaatttagtctctgaatg 22326570  T
Q  192 cagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaagga 281  Q
    |||||| |||||| | |||||||   |||||||||| || |||| |||||||||||||| ||||||||||| | | |||| |||||||||    
T  22326569 cagatttcgttagcctatttagttcctgaatgtagattccgttaatcactttagtccctaaaattgaccaatagagtctacattcaagga 22326480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 21184312 - 21184434
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||||||||||||||| ||||||||||| ||||||  |||| || ||||||||||||||||||||||||| || ||| | ||||| ||||||||||||||    
T  21184312 gtccctgaataggaaatgagtcgtcactctagtccccgaatgcagataaattgcaaaatagtccctgaatataaact-tattagtcaatttagtccctga 21184410  T
Q  189 atgcagattccgttagtcaattta 212  Q
    || |||| ||||||| ||||||||    
T  21184411 atacagactccgttaatcaattta 21184434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 147 - 281
Target Start/End: Original strand, 31253977 - 31254109
Alignment:
Q  147 tagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagt 246  Q
    |||||| ||||||||||||  |||||| ||||||||||||||||||||| || ||||||||||||||||  | |||||||| | |||||||||||||| |    
T  31253977 tagtccatgaatgtagact--gttagtcaatttagtccctgaatgcagactctgttagtcaatttagtccctaaatgtagattttgttagtcactttaat 31254074  T
Q  247 ccctgaaattgaccaacaaaatctaaattcaagga 281  Q
    |||||||||| ||||||  | |||| |||||||||    
T  31254075 ccctgaaattaaccaacggagtctacattcaagga 31254109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 29585663 - 29585576
Alignment:
Q  142 caaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagact 229  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||||||||||| |  ||||||||||||||||  ||||||||||||    
T  29585663 caaaatagtccctgaatgtagactttgttattcaatttagtccctgaatgcagactttgttagtcaatttagtccctgaatgtagact 29585576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 96 - 189
Target Start/End: Original strand, 23625054 - 23625147
Alignment:
Q  96 aataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaa 189  Q
    |||||||||| |||| |||||||||||| ||||| |||||| |||| |||||||| |||||||| |||||||||| || |||||||||||||||    
T  23625054 aataggaaagtagtcatcactttagtccctgaatacaaatagattgtaaaatagtacctgaatgcagactctgttggtcaatttagtccctgaa 23625147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 218 - 365
Target Start/End: Original strand, 21185804 - 21185947
Alignment:
Q  218 tgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcattcagggacta 317  Q
    |||||||| |||| ||||||||||||||||| ||||||||||||||| | |||| ||| | |||  |    |||| ||||||||| ||||||||||||||    
T  21185804 tgaatgtacactcagttagtcactttagtccatgaaattgaccaacagagtctatatttagggaacg----tttttcaatttttcagcattcagggacta 21185899  T
Q  318 aagtgagtactcatttcccattgtagc-actaaagtgactaatttccca 365  Q
    |||||| |||||||||| ||||  ||| |||||||||||||||| ||||    
T  21185900 aagtgactactcatttctcatt-cagcgactaaagtgactaattcccca 21185947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 12106880 - 12106970
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||||||||| ||||| |||| ||||||||||||| ||||| || | ||||||||||| |||||||| |||||||||||||| || |||||    
T  12106880 gtccctgaatgggaaatgagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctggatgtagactctgttggtcaattt 12106970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 25149251 - 25149341
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||||||||| | ||| |||| ||||||||| ||| ||||| |||| ||||||||||| ||||||||||||||||||||||| || |||||    
T  25149251 gtccctgaatggaaaaagagtagtcactttaatccctgaatgcaaagaaattgcaaaacagtccctgaatgtagactctgttggtcaattt 25149341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 23976117 - 23976194
Alignment:
Q  102 aaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||| ||| ||||||||||| | ||||| || | ||||||||||| |||||||||||||||||||||||||| |||||    
T  23976117 aaagaagtagtcactttagttcctgaatgcagagaaattgcaaaacagtccctgaatgtagactctgttagtcaattt 23976194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 289 - 368
Target Start/End: Complemental strand, 21184369 - 21184290
Alignment:
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatttcccattt 368  Q
    ||||||||||| ||||||||| ||||||| |||||  |||||||||| |||   | ||||||||||||||||||||||||    
T  21184369 ttttgcaatttatctgcattcggggactagagtgacgactcatttcctattcagggactaaagtgactaatttcccattt 21184290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 284 - 335
Target Start/End: Complemental strand, 37494390 - 37494339
Alignment:
Q  284 gattgttttgcaatttttctgcattcagggactaaagtgagtactcatttcc 335  Q
    ||||||||| |||||| ||||||||||||||||||||||| |||| ||||||    
T  37494390 gattgttttacaatttctctgcattcagggactaaagtgactacttatttcc 37494339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 22426917 - 22426991
Alignment:
Q  179 tagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaa 253  Q
    ||||||||||||| ||  || ||||||||||||||||  ||||||||| |||| ||||||| ||| |||||||||    
T  22426917 tagtccctgaatgtagtctctgttagtcaatttagtccctgaatgtagtctcttttagtcaatttggtccctgaa 22426991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 253
Target Start/End: Complemental strand, 29585658 - 29585584
Alignment:
Q  179 tagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaa 253  Q
    ||||||||||||| ||| |  |||| |||||||||||  |||||| ||||| ||||||||| |||||||||||||    
T  29585658 tagtccctgaatgtagactttgttattcaatttagtccctgaatgcagactttgttagtcaatttagtccctgaa 29585584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 22469447 - 22469536
Alignment:
Q  90 tccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    ||||||||| |||||||||| | |||||| || | |||||  | | ||||||||||| |||||||||||| |||||||||| || |||||    
T  22469447 tccctgaatgggaaaggagtagccactttcgttcctgaatgtagagaaattgcaaaacagtccctgaatgcagactctgttggtcaattt 22469536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 179
Target Start/End: Complemental strand, 21124613 - 21124535
Alignment:
Q  101 gaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    ||||||||| ||||||||| | | |||||  | | ||||||||||| ||||| ||||||||||||||||| || |||||    
T  21124613 gaaaggagtagtcactttaattcctgaatgtagagaaattgcaaaacagtccttgaatgtagactctgttggtcaattt 21124535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 23625112 - 23625157
Alignment:
Q  218 tgaatgtagactctgttagtcactttagtccctgaaattgaccaac 263  Q
    |||||| |||||||||| |||| |||||||||||||||||| ||||    
T  23625112 tgaatgcagactctgttggtcaatttagtccctgaaattgatcaac 23625157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 284 - 365
Target Start/End: Original strand, 25149442 - 25149523
Alignment:
Q  284 gattgttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatttccca 365  Q
    |||| ||||||| ||| ||||||||||| ||||| |||||  |||||||||| |||   | ||||||||||||||| |||||    
T  25149442 gattattttgcagtttatctgcattcagagactatagtgacgactcatttcctattcagggactaaagtgactaatctccca 25149523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 37494467 - 37494422
Alignment:
Q  165 tctgttagttaatttagtccctgaatgcagattccgttagtcaatt 210  Q
    ||||||||| ||||||||||||||||||||| | | ||||||||||    
T  37494467 tctgttagtcaatttagtccctgaatgcagacttcattagtcaatt 37494422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 100; Significance: 5e-49; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 137 - 264
Target Start/End: Original strand, 314139 - 314266
Alignment:
Q  137 aattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttag 236  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||||||    
T  314139 aattgcaaaatagtccctaaatgtagactctgttagtcaatttagtccctgaatgcagactccgttagtcaatttagtccctgaatgtagagtctgttag 314238  T
Q  237 tcactttagtccctgaaattgaccaaca 264  Q
    |||||||||||||||||||| |||||||    
T  314239 tcactttagtccctgaaattaaccaaca 314266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 90; Significance: 4e-43; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 101 - 266
Target Start/End: Original strand, 15390 - 15555
Alignment:
Q  101 gaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccg 200  Q
    |||| |||| ||||||||||||||||||| || |||||||| ||||||||| ||||||||||||||||||||| |||||| || ||||||| ||| ||||    
T  15390 gaaatgagttgtcactttagtccttgaatgcagataaattgtaaaatagtctctgaatgtagactctgttagtcaatttaatctctgaatgtagactccg 15489  T
Q  201 ttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaa 266  Q
    |||| ||||||||||| |||||||||| ||||| ||||  |||||| |||||||||||| ||||||    
T  15490 ttagccaatttagtctctgaatgtagattctgtcagtcgttttagtacctgaaattgactaacaaa 15555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 83; Significance: 7e-39; HSPs: 6)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 111 - 253
Target Start/End: Complemental strand, 1111 - 969
Alignment:
Q  111 gtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatt 210  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| ||||||| | ||| | ||||||||||||||||||||||| ||||||||||||    
T  1111 gtcactttagtccttgaatgcaaataaattacaaaatagtccctgaacgtagactttattattcaatttagtccctgaatgcagatttcgttagtcaatt 1012  T
Q  211 tagtctatgaatgtagactctgttagtcactttagtccctgaa 253  Q
    |||||  |||||| |||||  |||||||| |||| ||||||||    
T  1011 tagtccctgaatgcagacttcgttagtcaatttaatccctgaa 969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 111 - 253
Target Start/End: Complemental strand, 7575 - 7433
Alignment:
Q  111 gtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatt 210  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| ||||||| | ||| | ||||||||||||||||||||||| ||||||||||||    
T  7575 gtcactttagtccttgaatgcaaataaattacaaaatagtccctgaacgtagactttattattcaatttagtccctgaatgcagatttcgttagtcaatt 7476  T
Q  211 tagtctatgaatgtagactctgttagtcactttagtccctgaa 253  Q
    |||||  |||||| |||||  |||||||| |||| ||||||||    
T  7475 tagtccctgaatgcagacttcgttagtcaatttaatccctgaa 7433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 147 - 323
Target Start/End: Complemental strand, 1043 - 872
Alignment:
Q  147 tagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagt 246  Q
    ||||||||||||| ||| |  |||||| ||||||||||||||||||||| | |||||||||||||| ||  |||||||||||| ||||||||||||||||    
T  1043 tagtccctgaatgcagatttcgttagtcaatttagtccctgaatgcagacttcgttagtcaatttaatccctgaatgtagactttgttagtcactttagt 944  T
Q  247 ccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcattcagggactaaagtga 323  Q
    ||||||||||||| || | | |||| |||||      || ||||||||||||| |||||||||||||||||||||||    
T  943 ccctgaaattgactaatagagtctacattca-----ggactgttttgcaatttctctgcattcagggactaaagtga 872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 147 - 323
Target Start/End: Complemental strand, 7507 - 7336
Alignment:
Q  147 tagtccctgaatgtagactctgttagttaatttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagt 246  Q
    ||||||||||||| ||| |  |||||| ||||||||||||||||||||| | |||||||||||||| ||  |||||||||||| ||||||||||||||||    
T  7507 tagtccctgaatgcagatttcgttagtcaatttagtccctgaatgcagacttcgttagtcaatttaatccctgaatgtagactttgttagtcactttagt 7408  T
Q  247 ccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctgcattcagggactaaagtga 323  Q
    ||||||||||||| || | | |||| |||||      || ||||||||||||| |||||||||||||||||||||||    
T  7407 ccctgaaattgactaatagagtctacattca-----ggactgttttgcaatttctctgcattcagggactaaagtga 7336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 871 - 938
Alignment:
Q  111 gtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    ||||||||||||| ||||| || | ||||||||||| ||| |||||||||||||||| ||||| |||||    
T  871 gtcactttagtccctgaatgcagagaaattgcaaaacagt-cctgaatgtagactctattagtcaattt 938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 7335 - 7402
Alignment:
Q  111 gtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    ||||||||||||| ||||| || | ||||||||||| ||| |||||||||||||||| ||||| |||||    
T  7335 gtcactttagtccctgaatgcagagaaattgcaaaacagt-cctgaatgtagactctattagtcaattt 7402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 75; Significance: 4e-34; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 92 - 360
Target Start/End: Complemental strand, 190441 - 190177
Alignment:
Q  92 cctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatg 191  Q
    ||||||||| ||| || ||||  ||||| ||| |||||  | |||||||||||||||||  || |||  ||||| ||||||| |||||||| |||||||     
T  190441 cctgaatagaaaaagaatcgttcctttaatccctgaatgtagataaattgcaaaatagtttctaaatacagactttgttagtcaatttagttcctgaata 190342  T
Q  192 cagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttt 291  Q
    |||| || ||||||||||||||||  | |||||| ||| ||||| ||| |||| ||||||||||||||||||| | |||| |||||  ||  || |||||    
T  190341 cagactctgttagtcaatttagtccctaaatgtaaactatgttaatcaatttaatccctgaaattgaccaacagagtctacattca--ga--gactgttt 190246  T
Q  292 tgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatt 360  Q
    |||||||| ||||||||||| ||||||| ||| ||||| |||||||||   | |||||| |||||||||    
T  190245 tgcaatttctctgcattcagagactaaaatgactactcttttcccattcagggactaaaatgactaatt 190177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 190191 - 190281
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||||||||| ||||| |||| |||| |||||||  ||||| || | ||||||||||| |||| |||||||||||||||||| || |||||    
T  190191 gtccctgaatgggaaaagagtagtcattttagtctctgaatgcagagaaattgcaaaacagtctctgaatgtagactctgttggtcaattt 190281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 70; Significance: 4e-31; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 89 - 359
Target Start/End: Original strand, 57462 - 57728
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    ||||||||||||||||| | |  |||||||||||| ||||| || |||||||| ||||||||  ||||||||| ||| ||||||| || |||||  ||||    
T  57462 gtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgaaaaatagtttctgaatgtatactatgttagtcaacttagtatctga 57561  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattg 288  Q
    ||||||| | ||||| |||||||||||  ||||| ||||||| ||||||||| ||| ||| |||||||||| |||| | ||||  ||||||     | ||    
T  57562 atgcagacttcgttaatcaatttagtccctgaatttagactcagttagtcacattaatccttgaaattgactaacagagtctacgttcaag----cactg 57657  T
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaat 359  Q
    ||||||||||| |||||||| | | ||| |||||| ||||| ||||  |||   | |||||||||||||||    
T  57658 ttttgcaatttctctgcattaaagtacttaagtgactactcttttctgattcaggaactaaagtgactaat 57728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 70; Significance: 4e-31; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 89 - 359
Target Start/End: Original strand, 127817 - 128083
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    ||||||||||||||||| | |  |||||||||||| ||||| || |||||||||||||||||  ||||||||| ||| ||||||| || |||||  ||||    
T  127817 gtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgcaaaatagtttctgaatgtatactatgttagtcaacttagtatctga 127916  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattg 288  Q
    ||||||| | ||||| |||||||| ||   |||| ||||||| ||||||||| ||| ||| |||||||||| |||| | ||||  ||||||     | ||    
T  127917 atgcagacttcgttaatcaatttaatcccagaatttagactcagttagtcacattaatccttgaaattgactaacagagtctacgttcaag----cactg 128012  T
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaat 359  Q
    ||||||||||| |||||||||| | ||| |||||| ||||| ||||  |||   | |||||||||||||||    
T  128013 ttttgcaatttctctgcattcaagtacttaagtgactactcttttctgattcaggaactaaagtgactaat 128083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 128067 - 127980
Alignment:
Q  92 cctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||||||  |||| |||| ||||||| ||| ||||||| || | ||||||||||| ||| | |||| ||||||||||||||| |||||    
T  128067 cctgaatcagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtcaattt 127980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300 (Bit Score: 57; Significance: 2e-23; HSPs: 3)
Name: scaffold1300
Description:

Target: scaffold1300; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 359
Target Start/End: Original strand, 1452 - 1629
Alignment:
Q  178 ttagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattca 277  Q
    |||||| ||||||||||| | ||||||| |||||||||  |||||||||||||  |||||||| ||| ||| |||||||||| |||| | ||||  ||||    
T  1452 ttagtctctgaatgcagacttcgttagttaatttagtccctgaatgtagactcaattagtcacattaatccttgaaattgactaacagagtctacgttca 1551  T
Q  278 aggattgattgttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaat 359  Q
    ||    || ||||||||||||| |||||||||| ||||| |||||| ||||| |||| ||||   | |||||||||||||||    
T  1552 ag----gactgttttgcaatttctctgcattcaaggacttaagtgactactcttttctcattcaggaactaaagtgactaat 1629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 1613 - 1526
Alignment:
Q  92 cctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||||||  |||| |||| ||||||| ||||||||||| || | ||||||||||| ||||| |||| ||||||||||||||| |||||    
T  1613 cctgaatgagaaaagagtagtcacttaagtccttgaatgcagagaaattgcaaaacagtccttgaacgtagactctgttagtcaattt 1526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 289 - 360
Target Start/End: Complemental strand, 1427 - 1356
Alignment:
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatt 360  Q
    ||||||||||| |||||||| ||||||||||||||  | | |||||| |||  || ||||||||||||||||    
T  1427 ttttgcaatttatctgcatttagggactaaagtgataatttatttcctattcaaggactaaagtgactaatt 1356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 56; Significance: 9e-23; HSPs: 4)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 205 - 353
Target Start/End: Complemental strand, 59855 - 59711
Alignment:
Q  205 tcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattgttttgcaatttttctg 304  Q
    |||||||||||  |||||| |||||| |||||||| ||||||||||||||||||| |||| | |||| ||||| ||  ||    ||||||||||| ||||    
T  59855 tcaatttagtccctgaatgcagactccgttagtcaatttagtccctgaaattgactaacagagtctacattcaggggctg----ttttgcaatttctctg 59760  T
Q  305 cattcagggactaaagtgagtactcatttcccattgtagcactaaagtg 353  Q
    ||||||||||||||||||| ||| | ||||||||||  | |||||||||    
T  59759 cattcagggactaaagtgactacacctttcccattgagggactaaagtg 59711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 59718 - 59808
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||||| ||| ||||||| || ||||||||||||| ||||| || | ||||||||||| || ||||||||||||||||||||||| |||||    
T  59718 gtccctcaatgggaaaggtgtagtcactttagtccctgaatgcagagaaattgcaaaacagcccctgaatgtagactctgttagtcaattt 59808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 59853 - 59813
Alignment:
Q  175 aatttagtccctgaatgcagattccgttagtcaatttagtc 215  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  59853 aatttagtccctgaatgcagactccgttagtcaatttagtc 59813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 189
Target Start/End: Complemental strand, 59849 - 59807
Alignment:
Q  147 tagtccctgaatgtagactctgttagttaatttagtccctgaa 189  Q
    ||||||||||||| |||||| |||||| |||||||||||||||    
T  59849 tagtccctgaatgcagactccgttagtcaatttagtccctgaa 59807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 53; Significance: 5e-21; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 179 - 339
Target Start/End: Original strand, 11676 - 11830
Alignment:
Q  179 tagtccctgaatgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaa 278  Q
    ||||||||||||| ||| |  ||||| ||||||| ||| |||||||| | |||||||||||||||||||||| |||||||| || | | |||  ||| ||    
T  11676 tagtccctgaatgtagactatgttaggcaatttaatctctgaatgtatattctgttagtcactttagtccctaaaattgactaagagagtct--atttaa 11773  T
Q  279 ggattgattgttttgcaatttttctgcattcagggactaaagtgagtactcatttcccatt 339  Q
    |    || | ||||||||||| |||||||||||||||||||| || |||||||||||||||    
T  11774 g----gactattttgcaatttctctgcattcagggactaaagcgactactcatttcccatt 11830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 93 - 215
Target Start/End: Original strand, 11623 - 11744
Alignment:
Q  93 ctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctgaatgc 192  Q
    |||||||||||| ||||||| | |||||||||  ||| || |||||||| ||||||||||||||||||||||| ||||||  |||||| || |||||||     
T  11623 ctgaataggaaatgagtcgttattttagtccta-aatgcagataaattgtaaaatagtccctgaatgtagactatgttaggcaatttaatctctgaatgt 11721  T
Q  193 agattccgttagtcaatttagtc 215  Q
    | |||| |||||||| |||||||    
T  11722 atattctgttagtcactttagtc 11744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 89 - 360
Target Start/End: Complemental strand, 27742 - 27488
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaatttagtccctga 188  Q
    |||||||| |||||||| ||||||||||||||||  ||||| ||||||||||||||||||| ||| |              |||  ||||||||||||||    
T  27742 gtccctgattaggaaagtagtcgtcactttagtctatgaatgcaaataaattgcaaaatagaccccgc-------------tagccaatttagtccctga 27656  T
Q  189 atgcagattccgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattcaaggattgattg 288  Q
    || || |  ||||||||||||||| |   ||||||||||||  ||| ||||||||||||| ||||||||||||||| | |||| ||| |||    || ||    
T  27655 atacataccccgttagtcaatttacttcctgaatgtagacttcgttcgtcactttagtccttgaaattgaccaacagagtctacatt-aag---agactg 27560  T
Q  289 ttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatt 360  Q
    ||||||||||| || | |||||||| ||||||| | ||||||||| | |||   | ||||||||||||||||    
T  27559 ttttgcaatttctccgtattcaggggctaaagtaactactcattttctattcagggactaaagtgactaatt 27488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 27502 - 27592
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtagactctgttagttaattt 179  Q
    |||||||||||| ||| |||| || ||||||| || ||||| |  | ||||||||||| |||| || ||||||||||||||| || |||||    
T  27502 gtccctgaatagaaaatgagtagttactttagcccctgaatacggagaaattgcaaaacagtctcttaatgtagactctgttggtcaattt 27592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 4)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 202 - 277
Target Start/End: Original strand, 72008 - 72083
Alignment:
Q  202 tagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaaatctaaattca 277  Q
    ||||||||||||||  |||||| | ||| ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  72008 tagtcaatttagtccctgaatgcaaactttgttagtcaatttagtccctgaaattgaccatcaaaatctacattca 72083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 71924 - 71995
Alignment:
Q  92 cctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgtaga 163  Q
    ||||| ||||| ||| |||||||||||| ||| ||||| || ||||||||||||||||||||||||| ||||    
T  71924 cctgagtaggataggggtcgtcactttaatccctgaatgcagataaattgcaaaatagtccctgaatataga 71995  T

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Target: scaffold0018; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 72177 - 72106
Alignment:
Q  89 gtccctgaataggaaaggagtcgtcactttagtccttgaattcaaataaattgcaaaatagtccctgaatgt 160  Q
    |||||||||| |||||| ||| ||||||||||||| |||||    | ||||||||||| |||||||||||||    
T  72177 gtccctgaatgggaaagaagtagtcactttagtccctgaatgtgcagaaattgcaaaacagtccctgaatgt 72106  T

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Target: scaffold0018; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 72118 - 72191
Alignment:
Q  287 tgttttgcaatttttctgcattcagggactaaagtgagtactcatttcccattgtagcactaaagtgactaatt 360  Q
    ||||||||||||| |   ||||||||||||||||||| ||||  |||||||||   | ||||||||||||||||    
T  72118 tgttttgcaatttctgcacattcagggactaaagtgactacttctttcccattcagggactaaagtgactaatt 72191  T

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