View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0601_low_54 (Length: 248)
Name: NF0601_low_54
Description: NF0601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0601_low_54 |
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Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 735298 - 735070
Alignment:
| Q |
1 |
atttaaaagtgaaaacgataaagtcatgaaactctttaaaatgatcataaattaaatgtgtatggttggttatatagtcctagctacatccactcttaca |
100 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
735298 |
atttaaaagtgaaaacaataaagtcatgaaactctttaaaatgatcataaattaaatgtgtatggttggttatatagtcctagctacatccactcttaca |
735199 |
T |
|
| Q |
101 |
cacaaataacactctcattagatgcatgagtaggtgagcaaatgaagtaatgaacccttctatgtaaaagtgagttttttgtgctaactagcactcttgt |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
735198 |
cacaaataacactctcattagatgcatgagtaggtgagcaaatgaagtaatgaacccttctatgtaaaagtgagttttttgtgctatctagcactcttgt |
735099 |
T |
|
| Q |
201 |
gtgttagagctagtaaaatggatacttgt |
229 |
Q |
| |
|
||||||||||||||||||||||||||||| |
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|
| T |
735098 |
gtgttagagctagtaaaatggatacttgt |
735070 |
T |
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