View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0602-INSERTION-26 (Length: 505)
Name: NF0602-INSERTION-26
Description: NF0602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0602-INSERTION-26 |
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Alignment Details
Target: chr7 (Bit Score: 469; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 469; E-Value: 0
Query Start/End: Original strand, 12 - 499
Target Start/End: Original strand, 6881416 - 6881904
Alignment:
| Q |
12 |
attctccatagtattcttgagtaaaagagattatgagcagagtagaataaagagagattgtttatatgtcagtttggtaaatacaggattcggttacagt |
111 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |
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| T |
6881416 |
attctccatagtattcttgagtaaaagagattatgagcagagtagaataaagagagattgtttatatgtcagtttggtaaatacagaattcggttacggt |
6881515 |
T |
|
| Q |
112 |
tgaacctgaattctcagtactgaattgcacatcagaattgaacaagtttactatcaactttaaggcaaccatagtctatatg-ctatcattgatttggat |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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|
| T |
6881516 |
tgaacctgaattctcagtactgaattgcacatcagaattgaacaagtttactatcaactttaaggcaaccatagtctatatgtctatcattgatttggat |
6881615 |
T |
|
| Q |
211 |
actgaatacatattaagatttgttgtcaaatttagccaatacatttaagccaaccacataatttcttctcaaactcaatctaattataagatcatgactt |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
6881616 |
actgaatacatattaagatttgttgtcaaatttagccaatacatttaagccaaccacataatttcttctcaaactcaatctaattataagatcatggctt |
6881715 |
T |
|
| Q |
311 |
acattaatgcattgcctagcacaatggcaaggctataagaaatgtatcttgcattttctggagaaatcctatcttgcattaaaatgagccagttatccaa |
410 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6881716 |
acattaatgcattgcctagcacaatggcaaggctataagaaatgtatcttgcattttctggagaaatcctatcttgcattaaaatgagccagttatccaa |
6881815 |
T |
|
| Q |
411 |
agcttgcacattatctttcatgcattgtagtgctttgcttaataagtaatcttttttggtcgaaagacttaataagtaatctatataat |
499 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
6881816 |
agcttgcacattatctttcatgcattgtagtgctttgcttaataagtaatcttttttggtcgaaagacttaataagtaatctatataat |
6881904 |
T |
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