View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0602_high_15 (Length: 299)
Name: NF0602_high_15
Description: NF0602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0602_high_15 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 78 - 299
Target Start/End: Complemental strand, 24811913 - 24811692
Alignment:
| Q |
78 |
cataccacactgctatgaaggtacgatgagtaaacttttagaccaaagatatataaagagaatagaattgcaaaaagaaaataaaagagcgttaagaagt |
177 |
Q |
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| T |
24811913 |
cataccacactgctatgaaggtacgatgagtaaacttttagaccaaagatatataaagagaatagaattgcaaaaagaaaacaaaagagcgttaagaagt |
24811814 |
T |
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| Q |
178 |
tggtannnnnnnagctacataacgttgaactacatttcaaagaaattagtttattgttctcatgatcatatccttcaagaaccctcttatatgaagtact |
277 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
24811813 |
tggtatttttttagctacataacgttgaactacatttcaaagaaattagtttattgttctcatgatcatatccttcaagaaccatcttatatgaagtact |
24811714 |
T |
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| Q |
278 |
tgaaatggtacatttcaaataa |
299 |
Q |
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|||||||||||||||||||||| |
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| T |
24811713 |
tgaaatggtacatttcaaataa |
24811692 |
T |
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