View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0602_low_8 (Length: 487)

Name: NF0602_low_8
Description: NF0602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0602_low_8
NF0602_low_8
[»] chr8 (44 HSPs)
chr8 (95-487)||(41971549-41971943)
chr8 (11-96)||(41971419-41971504)
chr8 (393-459)||(17491713-17491779)
chr8 (393-459)||(35362709-35362775)
chr8 (337-445)||(29520820-29520928)
chr8 (366-446)||(43904697-43904777)
chr8 (392-459)||(24399847-24399914)
chr8 (386-449)||(30559860-30559923)
chr8 (392-467)||(33076274-33076348)
chr8 (367-449)||(490502-490584)
chr8 (398-452)||(35643670-35643724)
chr8 (393-459)||(39967558-39967624)
chr8 (367-452)||(24558647-24558732)
chr8 (393-441)||(3638392-3638440)
chr8 (431-487)||(9695748-9695804)
chr8 (367-459)||(32931118-32931209)
chr8 (395-459)||(36069759-36069823)
chr8 (401-452)||(12966381-12966432)
chr8 (396-447)||(16917352-16917403)
chr8 (393-459)||(14459052-14459118)
chr8 (350-452)||(16035743-16035845)
chr8 (393-459)||(28169549-28169615)
chr8 (386-448)||(35825508-35825570)
chr8 (393-459)||(35914660-35914726)
chr8 (386-467)||(42584508-42584589)
chr8 (423-475)||(6483436-6483488)
chr8 (392-452)||(10824247-10824307)
chr8 (393-449)||(21425213-21425269)
chr8 (425-481)||(28254995-28255051)
chr8 (393-464)||(23492186-23492257)
chr8 (393-452)||(30198325-30198384)
chr8 (392-459)||(30783100-30783167)
chr8 (397-463)||(10079970-10080036)
chr8 (393-459)||(29700433-29700499)
chr8 (407-452)||(16971827-16971872)
chr8 (454-487)||(45512627-45512660)
chr8 (167-199)||(6895835-6895867)
chr8 (392-452)||(7615649-7615709)
chr8 (386-438)||(18737190-18737242)
chr8 (386-438)||(18742075-18742127)
chr8 (386-438)||(18747039-18747091)
chr8 (423-459)||(23023382-23023418)
chr8 (391-459)||(33827814-33827882)
chr8 (391-439)||(36143518-36143566)
[»] chr7 (36 HSPs)
chr7 (397-487)||(28542007-28542097)
chr7 (367-487)||(27893596-27893716)
chr7 (386-487)||(36101829-36101930)
chr7 (393-487)||(5418197-5418289)
chr7 (393-484)||(34341454-34341541)
chr7 (393-459)||(37976392-37976458)
chr7 (393-459)||(38135272-38135338)
chr7 (393-449)||(47796211-47796267)
chr7 (395-458)||(1569174-1569237)
chr7 (368-459)||(28627967-28628058)
chr7 (386-459)||(35922410-35922483)
chr7 (400-459)||(24549754-24549813)
chr7 (392-459)||(28858202-28858269)
chr7 (360-459)||(30664725-30664824)
chr7 (393-463)||(3457514-3457584)
chr7 (393-459)||(14057635-14057701)
chr7 (393-459)||(14367663-14367729)
chr7 (393-459)||(26741953-26742019)
chr7 (393-459)||(40391882-40391948)
chr7 (161-198)||(19130227-19130264)
chr7 (355-459)||(9796241-9796345)
chr7 (396-452)||(48202764-48202820)
chr7 (393-452)||(33731998-33732057)
chr7 (337-448)||(40979931-40980042)
chr7 (393-452)||(45601640-45601699)
chr7 (393-459)||(12966173-12966239)
chr7 (393-459)||(36239855-36239921)
chr7 (167-200)||(7245949-7245982)
chr7 (386-459)||(21517432-21517505)
chr7 (454-487)||(22174117-22174150)
chr7 (393-449)||(1531420-1531476)
chr7 (393-465)||(2882795-2882867)
chr7 (393-449)||(9210763-9210819)
chr7 (164-200)||(26850740-26850776)
chr7 (423-459)||(30144932-30144968)
chr7 (393-449)||(47848840-47848896)
[»] chr1 (51 HSPs)
chr1 (386-487)||(43375650-43375752)
chr1 (391-487)||(13827637-13827735)
chr1 (337-459)||(8796366-8796488)
chr1 (393-487)||(17233830-17233924)
chr1 (393-446)||(52900701-52900754)
chr1 (367-459)||(52532649-52532741)
chr1 (393-459)||(3818915-3818981)
chr1 (367-449)||(27072520-27072602)
chr1 (393-459)||(40416528-40416594)
chr1 (364-487)||(5338841-5338965)
chr1 (337-440)||(25715329-25715432)
chr1 (393-483)||(35828621-35828711)
chr1 (393-445)||(14557739-14557791)
chr1 (356-444)||(27520229-27520317)
chr1 (337-448)||(10200309-10200420)
chr1 (393-464)||(28511860-28511931)
chr1 (337-444)||(41560401-41560508)
chr1 (393-471)||(17640126-17640204)
chr1 (333-459)||(39140672-39140798)
chr1 (414-459)||(8676945-8676990)
chr1 (394-459)||(10569131-10569196)
chr1 (422-467)||(10584985-10585030)
chr1 (394-443)||(19908095-19908144)
chr1 (396-487)||(1661545-1661639)
chr1 (395-467)||(19936609-19936681)
chr1 (375-459)||(29577184-29577267)
chr1 (393-481)||(36623943-36624031)
chr1 (394-464)||(990518-990588)
chr1 (337-419)||(28090697-28090779)
chr1 (393-459)||(29128940-29129006)
chr1 (393-447)||(40920588-40920642)
chr1 (423-464)||(4590621-4590662)
chr1 (454-487)||(6025722-6025755)
chr1 (391-448)||(8342938-8342995)
chr1 (386-443)||(31979654-31979711)
chr1 (398-439)||(39776959-39777000)
chr1 (395-452)||(42501272-42501329)
chr1 (454-487)||(49377441-49377474)
chr1 (394-459)||(52292197-52292261)
chr1 (391-460)||(52633229-52633298)
chr1 (367-447)||(2544762-2544842)
chr1 (391-467)||(5275262-5275337)
chr1 (397-457)||(6025764-6025824)
chr1 (393-441)||(6084150-6084198)
chr1 (392-448)||(11331262-11331318)
chr1 (392-448)||(11489283-11489339)
chr1 (400-448)||(19908450-19908498)
chr1 (337-445)||(37462879-37462986)
chr1 (423-478)||(37591132-37591188)
chr1 (393-449)||(50846729-50846785)
chr1 (455-487)||(52073185-52073217)
[»] chr4 (45 HSPs)
chr4 (337-452)||(55007910-55008025)
chr4 (387-465)||(30621254-30621332)
chr4 (391-487)||(31339652-31339749)
chr4 (393-459)||(20105577-20105643)
chr4 (397-459)||(21945701-21945763)
chr4 (396-458)||(25574982-25575044)
chr4 (337-459)||(26024853-26024975)
chr4 (375-487)||(29398935-29399045)
chr4 (393-487)||(13805324-13805430)
chr4 (423-473)||(31459137-31459187)
chr4 (337-459)||(51421887-51422009)
chr4 (393-463)||(53518382-53518452)
chr4 (393-459)||(53540447-53540513)
chr4 (392-452)||(32312650-32312710)
chr4 (337-433)||(39100539-39100635)
chr4 (367-442)||(30480297-30480372)
chr4 (393-440)||(34379579-34379626)
chr4 (393-443)||(34208328-34208378)
chr4 (393-451)||(41192226-41192284)
chr4 (393-459)||(42639079-42639145)
chr4 (392-458)||(44384988-44385054)
chr4 (393-459)||(47372808-47372874)
chr4 (393-458)||(27049236-27049301)
chr4 (398-459)||(31043229-31043290)
chr4 (454-487)||(34233156-34233189)
chr4 (394-459)||(56439631-56439696)
chr4 (395-459)||(45204900-45204964)
chr4 (396-452)||(55388273-55388329)
chr4 (375-433)||(20601693-20601751)
chr4 (393-459)||(26037564-26037630)
chr4 (393-463)||(31403093-31403163)
chr4 (161-199)||(33792189-33792227)
chr4 (393-459)||(37042723-37042789)
chr4 (394-459)||(2557732-2557797)
chr4 (393-446)||(26510558-26510611)
chr4 (454-487)||(47147490-47147523)
chr4 (393-438)||(51438623-51438668)
chr4 (165-210)||(56049779-56049824)
chr4 (364-448)||(1793630-1793714)
chr4 (393-457)||(6843774-6843838)
chr4 (423-459)||(26025008-26025044)
chr4 (423-459)||(47147530-47147566)
chr4 (454-486)||(49987526-49987558)
chr4 (403-459)||(52360013-52360069)
chr4 (337-445)||(56375461-56375569)
[»] chr3 (38 HSPs)
chr3 (392-465)||(29601043-29601116)
chr3 (395-487)||(50237695-50237786)
chr3 (400-459)||(29475843-29475902)
chr3 (393-475)||(19758028-19758110)
chr3 (367-484)||(36304098-36304215)
chr3 (393-446)||(40116397-40116450)
chr3 (364-459)||(23534600-23534695)
chr3 (396-459)||(40116530-40116593)
chr3 (393-474)||(19737126-19737207)
chr3 (394-459)||(45289151-45289216)
chr3 (393-449)||(54128546-54128602)
chr3 (393-452)||(55244442-55244501)
chr3 (393-459)||(39600740-39600806)
chr3 (393-463)||(41842582-41842652)
chr3 (391-449)||(48712132-48712190)
chr3 (393-459)||(49841773-49841839)
chr3 (454-487)||(33755474-33755507)
chr3 (393-438)||(40991609-40991654)
chr3 (400-465)||(44571578-44571643)
chr3 (367-450)||(49888356-49888436)
chr3 (337-441)||(32170580-32170684)
chr3 (337-445)||(48508406-48508514)
chr3 (367-459)||(54365008-54365100)
chr3 (396-459)||(37534264-37534327)
chr3 (393-459)||(39235295-39235361)
chr3 (367-449)||(42510049-42510131)
chr3 (337-438)||(14415263-14415363)
chr3 (165-227)||(23790392-23790456)
chr3 (454-487)||(31261074-31261107)
chr3 (392-449)||(37779044-37779101)
chr3 (386-435)||(40106672-40106721)
chr3 (391-440)||(41971327-41971376)
chr3 (367-459)||(49042093-49042186)
chr3 (423-459)||(19162676-19162712)
chr3 (367-439)||(34844606-34844678)
chr3 (395-443)||(38431021-38431069)
chr3 (423-459)||(41452829-41452865)
chr3 (455-487)||(41482272-41482304)
[»] chr2 (36 HSPs)
chr2 (402-487)||(11412837-11412921)
chr2 (393-486)||(13240822-13240915)
chr2 (392-452)||(37452284-37452344)
chr2 (336-451)||(19336895-19337010)
chr2 (393-449)||(6219132-6219188)
chr2 (397-463)||(45077880-45077948)
chr2 (391-459)||(33287578-33287646)
chr2 (400-459)||(26670925-26670984)
chr2 (392-459)||(33625256-33625323)
chr2 (393-487)||(7615399-7615492)
chr2 (393-459)||(9496023-9496089)
chr2 (393-487)||(13474273-13474370)
chr2 (393-459)||(42149719-42149785)
chr2 (393-459)||(33504380-33504447)
chr2 (394-487)||(2377181-2377275)
chr2 (337-459)||(12882048-12882170)
chr2 (337-459)||(13149489-13149611)
chr2 (393-459)||(23915752-23915818)
chr2 (393-459)||(31254445-31254511)
chr2 (393-459)||(38435109-38435175)
chr2 (395-459)||(9556430-9556494)
chr2 (396-459)||(26784402-26784465)
chr2 (393-448)||(32402668-32402723)
chr2 (393-436)||(36366816-36366859)
chr2 (364-459)||(43751977-43752072)
chr2 (393-459)||(3481311-3481377)
chr2 (393-459)||(8197600-8197666)
chr2 (393-459)||(8202360-8202426)
chr2 (393-459)||(12141701-12141767)
chr2 (393-447)||(32364980-32365034)
chr2 (393-459)||(37470192-37470258)
chr2 (338-432)||(41545589-41545683)
chr2 (163-208)||(18103749-18103794)
chr2 (348-409)||(41778627-41778688)
chr2 (393-449)||(18959078-18959134)
chr2 (391-459)||(21834711-21834779)
[»] chr6 (22 HSPs)
chr6 (367-459)||(8364713-8364805)
chr6 (337-452)||(34508-34623)
chr6 (395-464)||(1748006-1748075)
chr6 (386-459)||(24665968-24666041)
chr6 (337-445)||(30031427-30031535)
chr6 (337-420)||(586046-586129)
chr6 (393-459)||(9593767-9593833)
chr6 (393-449)||(5096001-5096057)
chr6 (367-459)||(31818688-31818780)
chr6 (164-200)||(33529353-33529389)
chr6 (375-449)||(26291944-26292018)
chr6 (393-459)||(35199682-35199747)
chr6 (454-487)||(34637-34670)
chr6 (166-203)||(9990420-9990457)
chr6 (395-452)||(14389222-14389279)
chr6 (337-409)||(1615226-1615298)
chr6 (393-441)||(3210567-3210615)
chr6 (164-200)||(5565468-5565504)
chr6 (168-200)||(9053921-9053953)
chr6 (161-201)||(19390966-19391006)
chr6 (167-199)||(26373111-26373143)
chr6 (396-452)||(32400297-32400353)
[»] chr5 (39 HSPs)
chr5 (406-487)||(39322138-39322219)
chr5 (359-459)||(6889150-6889250)
chr5 (367-459)||(9235204-9235296)
chr5 (364-458)||(6788225-6788319)
chr5 (387-448)||(43557886-43557947)
chr5 (368-452)||(30588611-30588695)
chr5 (393-456)||(14667931-14667994)
chr5 (364-459)||(29922441-29922536)
chr5 (367-449)||(418067-418149)
chr5 (367-459)||(11675686-11675779)
chr5 (391-444)||(35615455-35615508)
chr5 (395-450)||(37918198-37918253)
chr5 (337-459)||(7678635-7678756)
chr5 (393-459)||(12576919-12576985)
chr5 (430-487)||(27799960-27800017)
chr5 (426-467)||(28005684-28005725)
chr5 (394-458)||(17340496-17340560)
chr5 (391-459)||(23980101-23980169)
chr5 (423-459)||(28186864-28186900)
chr5 (386-446)||(32516725-32516785)
chr5 (423-482)||(40938045-40938105)
chr5 (367-438)||(15252777-15252848)
chr5 (375-438)||(21193693-21193756)
chr5 (393-459)||(2066154-2066220)
chr5 (386-432)||(7593725-7593771)
chr5 (453-487)||(12576991-12577025)
chr5 (398-452)||(33636627-33636681)
chr5 (176-226)||(38150049-38150099)
chr5 (393-459)||(43035138-43035204)
chr5 (393-459)||(43475396-43475462)
chr5 (454-487)||(5305756-5305789)
chr5 (166-199)||(17755234-17755267)
chr5 (454-487)||(18698911-18698944)
chr5 (386-459)||(20367050-20367123)
chr5 (386-475)||(36200870-36200959)
chr5 (367-459)||(6859538-6859630)
chr5 (167-203)||(34156684-34156720)
chr5 (405-449)||(41894233-41894277)
chr5 (165-201)||(41894443-41894479)
[»] scaffold0010 (1 HSPs)
scaffold0010 (393-459)||(160383-160449)
[»] scaffold0018 (2 HSPs)
scaffold0018 (400-459)||(43528-43587)
scaffold0018 (422-459)||(178508-178545)
[»] scaffold0180 (1 HSPs)
scaffold0180 (393-467)||(25502-25577)
[»] scaffold0015 (1 HSPs)
scaffold0015 (393-461)||(66692-66761)
[»] scaffold0491 (1 HSPs)
scaffold0491 (386-438)||(3880-3932)
[»] scaffold0373 (1 HSPs)
scaffold0373 (393-457)||(2360-2424)
[»] scaffold0050 (1 HSPs)
scaffold0050 (367-439)||(58259-58331)


Alignment Details
Target: chr8 (Bit Score: 343; Significance: 0; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 95 - 487
Target Start/End: Original strand, 41971549 - 41971943
Alignment:
Q  95 gttgtcaaatagtggctataattgggctatagcgtaacggaatttgaagaaatcaacattgttccatccacaatacgctatttagtacaaagtgttgtta 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41971549 gttgtcaaatagtggctataattgggctatagcgtaacggaatttgaagaaatcaacattgttccatccacaatacgctatttagtacaaagtgttgtta 41971648  T
Q  195 aatagcaac--gatagtactgtagcatagcagaattgtataacaaactgctgttttttgcgatccgcaattgaaaacacagttaattagatacnnnnnnn 292  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  41971649 aatagcaacacgatagtactgtagcatagcagaattgtataacaaactgctgttttttgcgatccgcaattgaaaacacagttaattagatacttttttt 41971748  T
Q  293 aataaaaacataatcaaaatgaaggcctggtttgatcaaaatccacaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagt 392  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||    
T  41971749 aataaaaacataatcaaaatgaaggcctggtttgagcaaaatccacaacaaccaagttttaccccattaaatgaggtcagctacatgaattatattaagt 41971848  T
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggttttcctctgcctctagtgat 487  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41971849 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggttttcctttgcctctagtgat 41971943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 41971419 - 41971504
Alignment:
Q  11 cacagatagataagataacaataacaaataccaaacctcatctcattgggtgggttgactacttggatcaaccattgttatattgt 96  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41971419 cacagatagataagataacaataacaaataccaaatctcatctcattgggtgggttgactacttggatcaaccattgttatattgt 41971504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 17491713 - 17491779
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||| || ||||||||| ||||||    
T  17491713 cataatgttctatcataaaccatattttggtccaactcattaatctccaagtctttcttaatagttt 17491779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 35362709 - 35362775
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||||||||||||| || ||||||||||||||||||||||| || ||||||||| || ||||||    
T  35362709 cataatgttctatcatacaccatatttcagtccaactcattaatttccaaatctttcctaatagttt 35362775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 337 - 445
Target Start/End: Complemental strand, 29520928 - 29520820
Alignment:
Q  337 acaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaat 436  Q
    |||||||||| |  ||| |||| |||||| ||| ||| ||||| || | |||| | |||||||||||||||||||| ||||||   ||||||||||||||    
T  29520928 acaacaaccaagcattatcccactaaatggggtgggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcattaat 29520829  T
Q  437 ctctaaatc 445  Q
    |||||||||    
T  29520828 ctctaaatc 29520820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 366 - 446
Target Start/End: Original strand, 43904697 - 43904777
Alignment:
Q  366 aggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatct 446  Q
    |||||||| ||||| || | |||| | |||||||||||||||||||| ||||||   ||||||||||||||||||||||||    
T  43904697 aggtcggctacatggatcaaattacgccataatgttctatcataaaccatatttagatccaactcattaatctctaaatct 43904777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 459
Target Start/End: Original strand, 24399847 - 24399914
Alignment:
Q  392 tcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||||||| | ||| |||||| ||||||    
T  24399847 tcataatattctatcataaaccatatttcaatccaactcattaatctcgagatccttcttaatagttt 24399914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 449
Target Start/End: Complemental strand, 30559923 - 30559860
Alignment:
Q  386 attaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttc 449  Q
    |||| |||||||||||||||||||||| |||| |   |||||||||||||||||||||||||||    
T  30559923 attacgtcataatgttctatcataaaccatatatggatccaactcattaatctctaaatctttc 30559860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 467
Target Start/End: Complemental strand, 33076348 - 33076274
Alignment:
Q  392 tcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggt 467  Q
    ||||||| |||||| |||||| ||||||  || |||||||||||||||||||||||| ||| ||||||||||||||    
T  33076348 tcataatattctattataaaccatattttggtacaactcattaatctctaaatcttt-ttaatagtttttctaggt 33076274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 367 - 449
Target Start/End: Complemental strand, 490584 - 490502
Alignment:
Q  367 ggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttc 449  Q
    ||||||| ||||| || | |||| | |||||||||||||||||||| ||||||   |||||||||| ||||||||||||||||    
T  490584 ggtcggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcatcaatctctaaatctttc 490502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 398 - 452
Target Start/End: Original strand, 35643670 - 35643724
Alignment:
Q  398 tgttctatcataaacaatatttcagtccaactcattaatctctaaatctttctta 452  Q
    ||||||||||||||| |||||||  ||||||||||||||||||| ||||||||||    
T  35643670 tgttctatcataaaccatatttcgatccaactcattaatctctagatctttctta 35643724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 39967558 - 39967624
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||| ||||||| |||| ||| ||||||||||||||| ||| |||||||||| ||||||    
T  39967558 cataatgttctaacataaactatatctcaatccaactcattaatcgctagatctttcttaatagttt 39967624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 452
Target Start/End: Complemental strand, 24558732 - 24558647
Alignment:
Q  367 ggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttctta 452  Q
    ||||||| ||||| || | |||| |||||||||||||||| | ||| ||   |||||||| |||||||||||||||||||||||||    
T  24558732 ggtcggctacatggatcaaattacgtcataatgttctatcgttaaccatgactcagtccagctcattaatctctaaatctttctta 24558647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 441
Target Start/End: Original strand, 3638392 - 3638440
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctcta 441  Q
    ||||||||||||||||| || ||||||| ||||||||||||||||||||    
T  3638392 cataatgttctatcatatactatatttctgtccaactcattaatctcta 3638440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 431 - 487
Target Start/End: Complemental strand, 9695804 - 9695748
Alignment:
Q  431 attaatctctaaatctttcttagtagtttttctaggttttcctctgcctctagtgat 487  Q
    ||||||||||| |||||||| | ||||||||| | ||||||||||||||||||||||    
T  9695804 attaatctctagatctttctaaatagtttttccaagttttcctctgcctctagtgat 9695748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 459
Target Start/End: Complemental strand, 32931209 - 32931118
Alignment:
Q  367 ggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||| ||||| || | |||| | ||||||||||||||||| || ||||||| ||||||||||||||| || ||||||||| || ||||||    
T  32931209 ggtcggctacatggatcaaattatgccataatgttctatcatacaccatatttc-gtccaactcattaatttcaaaatctttcctaatagttt 32931118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 459
Target Start/End: Complemental strand, 36069823 - 36069759
Alignment:
Q  395 taatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||| |||||||   ||||||||||||||||||||| ||| ||| ||||||    
T  36069823 taatgttctatcataaaccatatttctacccaactcattaatctctaaatatttgttaatagttt 36069759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 401 - 452
Target Start/End: Original strand, 12966381 - 12966432
Alignment:
Q  401 tctatcataaacaatatttcagtccaactcattaatctctaaatctttctta 452  Q
    |||||||||||| |||||| | | ||||||||||||||||||||||||||||    
T  12966381 tctatcataaaccatatttgaattcaactcattaatctctaaatctttctta 12966432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 447
Target Start/End: Complemental strand, 16917403 - 16917352
Alignment:
Q  396 aatgttctatcataaacaatatttcagtccaactcattaatctctaaatctt 447  Q
    |||||||||||||| || |||||||  |||||||||||||||||||||||||    
T  16917403 aatgttctatcatataccatatttctatccaactcattaatctctaaatctt 16917352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 14459118 - 14459052
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||| ||||||||| ||||||  ||| |||||||||||||| ||||||||| || ||||||    
T  14459118 cataatgttccatcataaaccatattttggtctaactcattaatctccaaatctttcctaatagttt 14459052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 452
Target Start/End: Original strand, 16035743 - 16035845
Alignment:
Q  350 tttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttc 449  Q
    |||| |||| ||| || |||| || |||||||| | |||| |||||||||||||| ||||||| |||||||  ||||||| | ||||||||| || ||||    
T  16035743 tttatcccactaagtggggtcagctacatgaatcaaattacgtcataatgttctaccataaaccatatttcgatccaactaagtaatctctagatatttc 16035842  T
Q  450 tta 452  Q
    |||    
T  16035843 tta 16035845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 28169615 - 28169549
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||| || |||||||||| |||||| | ||||||||||||||||| ||||||||| || ||||||    
T  28169615 cataatattttatcataaaccatatttgaatccaactcattaatctcaaaatctttcctaatagttt 28169549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 448
Target Start/End: Original strand, 35825508 - 35825570
Alignment:
Q  386 attaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatcttt 448  Q
    |||| |||| ||| ||||||||||||||||||||  || |||||||||| |||||||||||||    
T  35825508 attatgtcacaatcttctatcataaacaatattttggttcaactcattagtctctaaatcttt 35825570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 35914660 - 35914726
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||  || |||||| || ||||||    
T  35914660 cataatgttctatcataaaccatattttggtccaactcattaatcttcaagtctttcctaatagttt 35914726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 386 - 467
Target Start/End: Complemental strand, 42584589 - 42584508
Alignment:
Q  386 attaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggt 467  Q
    |||| |||||||||||||||||||||| ||||||   ||||| ||||||| || || ||||||| |  ||||||||||||||    
T  42584589 attacgtcataatgttctatcataaaccatatttggatccaaatcattaacctatagatctttccttatagtttttctaggt 42584508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 475
Target Start/End: Complemental strand, 6483488 - 6483436
Alignment:
Q  423 tccaactcattaatctctaaatctttcttagtagtttttctaggttttcctct 475  Q
    ||||| ||||||| || ||||||||||||| |||||||||||||| |||||||    
T  6483488 tccaattcattaacctttaaatctttcttaatagtttttctaggtcttcctct 6483436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 452
Target Start/End: Original strand, 10824247 - 10824307
Alignment:
Q  392 tcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttctta 452  Q
    |||||||||||||||| |||| ||||||  |||||| ||||||||||| ||||| ||||||    
T  10824247 tcataatgttctatcaaaaaccatattttggtccaattcattaatctccaaatcattctta 10824307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 449
Target Start/End: Complemental strand, 21425269 - 21425213
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttc 449  Q
    ||||||| |||||||||||  |||||||  ||||||||||||||||||| |||||||    
T  21425269 cataatggtctatcataaatcatatttcgatccaactcattaatctctatatctttc 21425213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 481
Target Start/End: Original strand, 28254995 - 28255051
Alignment:
Q  425 caactcattaatctctaaatctttcttagtagtttttctaggttttcctctgcctct 481  Q
    ||||||||||| |||||||||||||  | |||||||||||||| ||||||| |||||    
T  28254995 caactcattaacctctaaatctttccaaatagtttttctaggtcttcctctacctct 28255051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 464
Target Start/End: Complemental strand, 23492257 - 23492186
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttcta 464  Q
    |||| |||||||||||| |  |||||||  ||||||||||||||| ||| |||||||| |||||||| ||||    
T  23492257 catagtgttctatcatatatcatatttctatccaactcattaatcgctacatctttctgagtagtttctcta 23492186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 30198325 - 30198384
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttctta 452  Q
    |||||| ||||||||||||| ||||| |  ||||||||||||||||| | ||||||||||    
T  30198325 cataatattctatcataaaccatattccgatccaactcattaatctcaatatctttctta 30198384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 459
Target Start/End: Original strand, 30783100 - 30783167
Alignment:
Q  392 tcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||| ||| ||||||  ||||||  ||||||||||||||||||| |||||||| | ||||||    
T  30783100 tcataatgttttattataaaccgtatttcgatccaactcattaatctctagatctttctaaatagttt 30783167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 10079970 - 10080036
Alignment:
Q  397 atgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttct 463  Q
    ||||||||||| | |  |||||||  ||||||||||||||||||| ||||||||||  |||||||||    
T  10079970 atgttctatcaaatatcatatttctatccaactcattaatctctagatctttcttaacagtttttct 10080036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 29700499 - 29700433
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||||||| ||||  |||| ||||||| ||||| || |||||| || ||||||    
T  29700499 cataatgttctatcataaacaaaattttggtccgactcatttatctccaagtctttcctattagttt 29700433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 452
Target Start/End: Original strand, 16971827 - 16971872
Alignment:
Q  407 ataaacaatatttcagtccaactcattaatctctaaatctttctta 452  Q
    |||||| ||||||||||||||||||||||||| || ||| ||||||    
T  16971827 ataaactatatttcagtccaactcattaatctttatatccttctta 16971872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 487
Target Start/End: Original strand, 45512627 - 45512660
Alignment:
Q  454 tagtttttctaggttttcctctgcctctagtgat 487  Q
    |||||||||||||| |||||||||||||||||||    
T  45512627 tagtttttctaggtcttcctctgcctctagtgat 45512660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 6895835 - 6895867
Alignment:
Q  167 atacgctatttagtacaaagtgttgttaaatag 199  Q
    ||||||||||||||||||||||||| |||||||    
T  6895835 atacgctatttagtacaaagtgttgataaatag 6895867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 452
Target Start/End: Original strand, 7615649 - 7615709
Alignment:
Q  392 tcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttctta 452  Q
    ||||||| || |||||||||| |||||||  |||||||||||||| | ||||| |||||||    
T  7615649 tcataatattttatcataaactatatttcgatccaactcattaatttttaaatttttctta 7615709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 18737190 - 18737242
Alignment:
Q  386 attaagtcataatgttctatcataaacaatatttcagtccaactcattaatct 438  Q
    |||||| | |||||||| ||||||||| |||||| | ||||||||||||||||    
T  18737190 attaagccttaatgttcgatcataaaccatattttaatccaactcattaatct 18737242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 18742075 - 18742127
Alignment:
Q  386 attaagtcataatgttctatcataaacaatatttcagtccaactcattaatct 438  Q
    |||||| | |||||||| ||||||||| |||||| | ||||||||||||||||    
T  18742075 attaagccttaatgttcaatcataaaccatattttaatccaactcattaatct 18742127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 18747039 - 18747091
Alignment:
Q  386 attaagtcataatgttctatcataaacaatatttcagtccaactcattaatct 438  Q
    |||||| | |||||||| ||||||||| |||||| | ||||||||||||||||    
T  18747039 attaagccttaatgttcaatcataaaccatattttaatccaactcattaatct 18747091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Complemental strand, 23023418 - 23023382
Alignment:
Q  423 tccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||| || |||||||||||||||||    
T  23023418 tccaactcattaatctgtagatctttcttagtagttt 23023382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 459
Target Start/End: Original strand, 33827814 - 33827882
Alignment:
Q  391 gtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||| ||||||||||||||| ||||||   ||||| |||||||||| ||||| ||| ||| ||||||    
T  33827814 gtcatattgttctatcataaaccatatttagatccaattcattaatctataaatattttttaatagttt 33827882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 439
Target Start/End: Complemental strand, 36143566 - 36143518
Alignment:
Q  391 gtcataatgttctatcataaacaatatttcagtccaactcattaatctc 439  Q
    |||||||||||||||||||||| ||||||  ||| || |||||||||||    
T  36143566 gtcataatgttctatcataaaccatattttggtcgaattcattaatctc 36143518  T

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Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 397 - 487
Target Start/End: Original strand, 28542007 - 28542097
Alignment:
Q  397 atgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggttttcctctgcctctagtgat 487  Q
    |||||||||||||||| ||| |||| |||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  28542007 atgttctatcataaaccatagttcaatccaactcattaatctctaaatctttcttaatagtttttctaggtcttcctatgcctctagtgat 28542097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 27893596 - 27893716
Alignment:
Q  367 ggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctagg 466  Q
    ||||||| |||||||| | |||| | |||||||||||||||||||  ||||||| ||||| ||||||||||||||||||||||||| |||||||||||||    
T  27893596 ggtcggctacatgaatcaaattatgccataatgttctatcataaaacatatttcggtccagctcattaatctctaaatctttcttaatagtttttctagg 27893695  T
Q  467 ttttcctctgcctctagtgat 487  Q
      |||||||  ||||||||||    
T  27893696 acttcctctatctctagtgat 27893716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 386 - 487
Target Start/End: Original strand, 36101829 - 36101930
Alignment:
Q  386 attaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggttttcctctgcctctagtg 485  Q
    |||| |||||||||||||||||||||| ||||||   |||||||||||||||| |||||||||| || || ||||||||||| |||||||||||||||||    
T  36101829 attacgtcataatgttctatcataaaccatattttgatccaactcattaatctataaatctttcataataatttttctaggtcttcctctgcctctagtg 36101928  T
Q  486 at 487  Q
    ||    
T  36101929 at 36101930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 393 - 487
Target Start/End: Complemental strand, 5418289 - 5418197
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggttttcctctgcctctagtgat 487  Q
    |||||||||||||||||||| ||||||| |||||||||||||| |||| ||||||||||| ||| |||  ||||| ||||| |||||||||||||    
T  5418289 cataatgttctatcataaaccatatttcggtccaactcattaa-ctcttaatctttcttaatag-tttagtaggtcttcctttgcctctagtgat 5418197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 484
Target Start/End: Original strand, 34341454 - 34341541
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggttttcctctgcctctagt 484  Q
    |||||||||||||||||||| |||||||| ||||||||||| ||||||| |     |||| |||||| ||||| ||||||||||||||||||    
T  34341454 cataatgttctatcataaaccatatttcaatccaactcattcatctctaga----acttaatagtttctctagtttttcctctgcctctagt 34341541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 37976458 - 37976392
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||||| ||||||   ||||||||||||||||||||||||||| || ||||||    
T  37976458 cataatgttctatcataaaccatatttggatccaactcattaatctctaaatctttcatattagttt 37976392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 38135272 - 38135338
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||| ||||||||||| | ||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  38135272 cataatattctatcataacccatatttcggtccaactcattaatctctaaatcttttttaatagttt 38135338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 449
Target Start/End: Original strand, 47796211 - 47796267
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttc 449  Q
    |||||| ||||||||||||| |||||||||||||||| |||||| ||||||||||||    
T  47796211 cataatattctatcataaaccatatttcagtccaacttattaatttctaaatctttc 47796267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 458
Target Start/End: Complemental strand, 1569237 - 1569174
Alignment:
Q  395 taatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtt 458  Q
    |||||||||||||||||| ||||||   ||||||||||||||||||| |||||||||| |||||    
T  1569237 taatgttctatcataaaccatattttgatccaactcattaatctctagatctttcttaatagtt 1569174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 459
Target Start/End: Original strand, 28627967 - 28628058
Alignment:
Q  368 gtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||| ||||| || | |||| | |||||||||||||||||||| | ||||   ||||||||||||||||||||||||||| || ||||||    
T  28627967 gtcggctacatggatcaaattacgccataatgttctatcataaaccacatttgcatccaactcattaatctctaaatctttcctaatagttt 28628058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 459
Target Start/End: Complemental strand, 35922483 - 35922410
Alignment:
Q  386 attaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||| |||||||||||||||||||||  ||||||   | ||||||||||| |||||||||||||||| ||||||    
T  35922483 attaggtcataatgttctatcataaatcatatttagattcaactcattaacctctaaatctttcttaatagttt 35922410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 459
Target Start/End: Original strand, 24549754 - 24549813
Alignment:
Q  400 ttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||| | || |||||||| ||||||||||||||||||| |||||||||| ||||||    
T  24549754 ttctatcaaataccatatttcaatccaactcattaatctctagatctttcttaatagttt 24549813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 459
Target Start/End: Complemental strand, 28858269 - 28858202
Alignment:
Q  392 tcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||| ||||||||||| | ||||||||  ||||||| ||||||||||| |||||||||| ||||||    
T  28858269 tcataacgttctatcatataaaatatttctatccaacttattaatctctagatctttcttaatagttt 28858202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 360 - 459
Target Start/End: Complemental strand, 30664824 - 30664725
Alignment:
Q  360 taaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||| ||||| || |||||| |||| | | || |||||||||| || ||    ||||||||||||||||||| |||||||||| ||||||    
T  30664824 taaatgaggtcggctacatggataatattacgtcaaagtattgtatcataaaccatgttatgatccaactcattaatctctagatctttcttaatagttt 30664725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 463
Target Start/End: Complemental strand, 3457584 - 3457514
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttct 463  Q
    ||||||||| |||||||||||||||||   |||||||||||||||| |  |||||||| | ||||||||||    
T  3457584 cataatgttttatcataaacaatattttgatccaactcattaatctttcgatctttctaattagtttttct 3457514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 14057701 - 14057635
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||||| |||||| | || ||| |||||| ||||||||||||| || ||||||    
T  14057701 cataatgttctatcataaaccatatttgaatcgaacgcattaacctctaaatctttcctaatagttt 14057635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 14367729 - 14367663
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||||| |||||| | || ||| |||||| ||||||||||||| || ||||||    
T  14367729 cataatgttctatcataaaccatatttgaatcgaacgcattaacctctaaatctttcctaatagttt 14367663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 26741953 - 26742019
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||||| ||||||| |||||||||||| || || |||| |||| || ||||||    
T  26741953 cataatgttctatcataaaccatatttcggtccaactcatttatttccaaatatttcctaatagttt 26742019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 40391882 - 40391948
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||| | ||||||| |||||||| |||||| |||||||| ||| || ||||||    
T  40391882 cataatgttctatcataagccatatttcggtccaacttattaatttctaaatcattcctactagttt 40391948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 19130264 - 19130227
Alignment:
Q  161 tccacaatacgctatttagtacaaagtgttgttaaata 198  Q
    |||||||||||||||||||||||||||||||| |||||    
T  19130264 tccacaatacgctatttagtacaaagtgttgtcaaata 19130227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 459
Target Start/End: Complemental strand, 9796345 - 9796241
Alignment:
Q  355 cccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagt 454  Q
    |||||||| |||||||||| ||||||||   |||| ||||||||||| ||| |||||||||   | | | ||||||||||||||||  ||||||| || |    
T  9796345 cccattaagtgaggtcggctacatgaatcgaattacgtcataatgttttattataaacaatgagtaaattcaactcattaatctctttatctttcatact 9796246  T
Q  455 agttt 459  Q
    |||||    
T  9796245 agttt 9796241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 452
Target Start/End: Original strand, 48202764 - 48202820
Alignment:
Q  396 aatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttctta 452  Q
    ||||||||| ||||||| |||||||| ||||||||||||| ||||| | ||||||||    
T  48202764 aatgttctaacataaaccatatttcaatccaactcattaaactctacaactttctta 48202820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 33732057 - 33731998
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttctta 452  Q
    |||||||||||||||||||| |||||||  ||  |||||||||||| || ||||||||||    
T  33732057 cataatgttctatcataaaccatatttcgatctcactcattaatctttagatctttctta 33731998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 448
Target Start/End: Original strand, 40979931 - 40980042
Alignment:
Q  337 acaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaat 436  Q
    |||||||||| |  ||| |||| ||| || ||||||| ||||| || | |||| | |||| ||||||||||||||| ||||||   ||||||||||| |     
T  40979931 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttggatccaactcattgac 40980030  T
Q  437 ctctaaatcttt 448  Q
    ||||||||||||    
T  40980031 ctctaaatcttt 40980042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 45601699 - 45601640
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttctta 452  Q
    |||| ||||||||||||||  ||||||   ||||||||||||||||||| ||||||||||    
T  45601699 catagtgttctatcataaatcatattttgatccaactcattaatctctagatctttctta 45601640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 12966239 - 12966173
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||| | ||||||| || |||||||  ||||| |||||||||||||||| ||||||| ||||||    
T  12966239 cataatgatttatcatataccatatttctatccaaatcattaatctctaaatatttcttaatagttt 12966173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 36239855 - 36239921
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||||  ||||||   |||||||| ||||||||||||| |||| || ||||||    
T  36239855 cataatgttctatcataaagcatatttggatccaactcgttaatctctaaatttttcctaatagttt 36239921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 200
Target Start/End: Complemental strand, 7245982 - 7245949
Alignment:
Q  167 atacgctatttagtacaaagtgttgttaaatagc 200  Q
    |||||||||||||||||||||||||| |||||||    
T  7245982 atacgctatttagtacaaagtgttgtcaaatagc 7245949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 459
Target Start/End: Original strand, 21517432 - 21517505
Alignment:
Q  386 attaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||| ||||||||||| |||||||||  ||||||   ||||||| |||||||||||||| ||| ||| ||||||    
T  21517432 attacgtcataatgttatatcataaatcatatttggatccaacttattaatctctaaatattttttaatagttt 21517505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 487
Target Start/End: Complemental strand, 22174150 - 22174117
Alignment:
Q  454 tagtttttctaggttttcctctgcctctagtgat 487  Q
    ||||||||||| ||||||||||||||||||||||    
T  22174150 tagtttttctacgttttcctctgcctctagtgat 22174117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 449
Target Start/End: Original strand, 1531420 - 1531476
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttc 449  Q
    ||||||||||||||  |||| ||||||  |||||||||||||| |||||||| ||||    
T  1531420 cataatgttctatcccaaaccatatttgggtccaactcattaacctctaaatttttc 1531476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 2882795 - 2882867
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctag 465  Q
    |||||||||||||||||||| || ||||  |||||||||||||| || |||  |||| || |||||| |||||    
T  2882795 cataatgttctatcataaaccatgtttcgatccaactcattaatttccaaaggtttcctaatagtttatctag 2882867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 449
Target Start/End: Original strand, 9210763 - 9210819
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttc 449  Q
    ||||||||| |||||||||| ||||||   ||||||||||||| |||||||| ||||    
T  9210763 cataatgttgtatcataaaccatatttggatccaactcattaacctctaaatttttc 9210819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 26850776 - 26850740
Alignment:
Q  164 acaatacgctatttagtacaaagtgttgttaaatagc 200  Q
    |||||||||||||||||||||||||| || |||||||    
T  26850776 acaatacgctatttagtacaaagtgtagtcaaatagc 26850740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Complemental strand, 30144968 - 30144932
Alignment:
Q  423 tccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  30144968 tccaactcattaatctctagatctttcttaatagttt 30144932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 449
Target Start/End: Complemental strand, 47848896 - 47848840
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttc 449  Q
    |||||||||||||||||||| ||||||   |||| |||||||||| | |||||||||    
T  47848896 cataatgttctatcataaaccatatttggatccagctcattaatccccaaatctttc 47848840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 386 - 487
Target Start/End: Original strand, 43375650 - 43375752
Alignment:
Q  386 attaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtt-tttctaggttttcctctgcctctagt 484  Q
    |||| |||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||| | ||||||||||||||    
T  43375650 attatgtcataatgttctatcatgaaccatatttcggtccaactcattaatctctaaatctttcttaatagttatttctaggtctccctctgcctctagt 43375749  T
Q  485 gat 487  Q
    |||    
T  43375750 gat 43375752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 391 - 487
Target Start/End: Original strand, 13827637 - 13827735
Alignment:
Q  391 gtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaa--tctttcttagtagtttttctaggttttcctctgcctctagtgat 487  Q
    ||||||||||||||||||| || |||||||  ||||||||||||||||||| |  | ||||||| |||||||||||||| |||||||||||||||||||    
T  13827637 gtcataatgttctatcatataccatatttctatccaactcattaatctctagacttttttcttaatagtttttctaggtcttcctctgcctctagtgat 13827735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 337 - 459
Target Start/End: Complemental strand, 8796488 - 8796366
Alignment:
Q  337 acaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaat 436  Q
    |||||||||| |  ||| |||| ||| || ||||||| ||||| |||| |||| | |||||||||||||||||||| |||||||| ||||| ||||||||    
T  8796488 acaacaaccaagccttatcccactaagtggggtcggctacatggattaaattacgccataatgttctatcataaaccatatttcaatccaagtcattaat 8796389  T
Q  437 ctctaaatctttcttagtagttt 459  Q
     |||| |||||||||| ||||||    
T  8796388 atctagatctttcttaatagttt 8796366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 393 - 487
Target Start/End: Original strand, 17233830 - 17233924
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggttttcctctgcctctagtgat 487  Q
    ||||||| ||||||||| || ||||| |  ||||||||| ||||| ||  |||||||||| |||||||||||||| |||||||||||||||||||    
T  17233830 cataatgctctatcatataccatattcctatccaactcaataatcgctggatctttcttaatagtttttctaggtcttcctctgcctctagtgat 17233924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 52900701 - 52900754
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatct 446  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  52900701 catagtgttctatcataaaccatatttcagtccaactcattaatctctaaatct 52900754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 459
Target Start/End: Original strand, 52532649 - 52532741
Alignment:
Q  367 ggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||| |||||||| | |||| | |||||||||||||||||||| ||||||   |||||||||||||| |||||||||||| || ||||||    
T  52532649 ggtcggctacatgaatcaaattacgccataatgttctatcataaaccatattttgttccaactcattaatttctaaatctttcctaatagttt 52532741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 3818915 - 3818981
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||| ||||||||| |||||||  | |||||||||||||||||||||||||||| ||||||    
T  3818915 cataatgttccatcataaaccatatttctattcaactcattaatctctaaatctttcttaatagttt 3818981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 449
Target Start/End: Original strand, 27072520 - 27072602
Alignment:
Q  367 ggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttc 449  Q
    ||||||| ||||| || | |||| | |||||||||||||||||||| ||||||| ||||||||| ||||| ||||||||||||    
T  27072520 ggtcggctacatggatcaaattacgccataatgttctatcataaaccatatttctgtccaactctttaatttctaaatctttc 27072602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 40416594 - 40416528
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||||| |||||||  |||||||||||||||| || |||||||||| ||||||    
T  40416594 cataatgttctatcataaaccatatttcgatccaactcattaatctatagatctttcttaatagttt 40416528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 364 - 487
Target Start/End: Complemental strand, 5338965 - 5338841
Alignment:
Q  364 tgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttct-tagtagtttttc 462  Q
    |||||| ||| ||||| || | |||| | ||||||||||||| |||||  | |||||  ||||||||||||||||||| |||||||| |  |||||||||    
T  5338965 tgaggttggctacatggatcaaattacgccataatgttctataataaatcacatttcgatccaactcattaatctctagatctttctcttatagtttttc 5338866  T
Q  463 taggttttcctctgcctctagtgat 487  Q
    ||||| | | |||||||||||||||    
T  5338865 taggtctacttctgcctctagtgat 5338841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 440
Target Start/End: Original strand, 25715329 - 25715432
Alignment:
Q  337 acaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaat 436  Q
    |||||||||| |  ||| |||| ||| |||||||||| ||||| || | |||| | |||||| ||||||||||||| ||||||| || ||||||||||||    
T  25715329 acaacaaccaagccttatcccactaagtgaggtcggctacatggatcaaattacgccataatattctatcataaaccatatttcggttcaactcattaat 25715428  T
Q  437 ctct 440  Q
    ||||    
T  25715429 ctct 25715432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 483
Target Start/End: Original strand, 35828621 - 35828711
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggttttcctctgcctctag 483  Q
    |||||||||||||| ||||| |||||||  ||||||||||||||    ||||||||| || ||||||||| || | |||||||||||||||    
T  35828621 cataatgttctatcgtaaaccatatttccatccaactcattaattatcaaatctttcctaatagtttttccagatcttcctctgcctctag 35828711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 445
Target Start/End: Complemental strand, 14557791 - 14557739
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatc 445  Q
    |||||||||||||||||||| | ||||| ||||||||||||||| ||||||||    
T  14557791 cataatgttctatcataaactacatttcggtccaactcattaatttctaaatc 14557739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 444
Target Start/End: Original strand, 27520229 - 27520317
Alignment:
Q  356 ccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaat 444  Q
    ||||||| |||||||| | |||||||| | ||||  ||||||||||||||||||||  ||||||   |||| |||||||||||||||||    
T  27520229 ccattaagtgaggtcgactacatgaatcaaattacatcataatgttctatcataaatcatatttggatccagctcattaatctctaaat 27520317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 337 - 448
Target Start/End: Original strand, 10200309 - 10200420
Alignment:
Q  337 acaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaat 436  Q
    |||||||||| |  ||| |||||||| |||||||||| ||||| || | ||||   ||| |||||||||||||||| ||||||   ||||||||||  ||    
T  10200309 acaacaaccaagcattatcccattaagtgaggtcggctacatggatcaaattacaccatgatgttctatcataaaccatatttggatccaactcatcgat 10200408  T
Q  437 ctctaaatcttt 448  Q
    ||||||||||||    
T  10200409 ctctaaatcttt 10200420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 464
Target Start/End: Original strand, 28511860 - 28511931
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttcta 464  Q
    |||||||||||||||||||| || |||  |||||||||||||||||| || |||||| ||||| ||| ||||    
T  28511860 cataatgttctatcataaaccatgttttggtccaactcattaatctccaagtctttcctagtaatttctcta 28511931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 337 - 444
Target Start/End: Complemental strand, 41560508 - 41560401
Alignment:
Q  337 acaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaat 436  Q
    |||||||||| |  ||| |||| ||| || ||||||| ||||| || | |||| | |||||||||||||||||| | ||||||   ||||||||||||||    
T  41560508 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataacccatatttggatccaactcattaat 41560409  T
Q  437 ctctaaat 444  Q
    ||||||||    
T  41560408 ctctaaat 41560401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 471
Target Start/End: Original strand, 17640126 - 17640204
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggttttc 471  Q
    ||||||||||||| | || ||||||||   ||||||||||||||||||| ||| ||| |  ||||||||||||||||||    
T  17640126 cataatgttctattacaagcaatatttttatccaactcattaatctctagatccttccttatagtttttctaggttttc 17640204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 459
Target Start/End: Complemental strand, 39140798 - 39140672
Alignment:
Q  333 atccacaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcat 432  Q
    |||||||||||||| |  ||| |||| ||| || ||||||| |||||||| | |||| | ||||||||||||||  |||| ||||||   ||||||| ||    
T  39140798 atccacaacaaccaagcattatcccactaagtggggtcggctacatgaatcaaattacgccataatgttctatctgaaaccatatttggatccaactaat 39140699  T
Q  433 taatctctaaatctttcttagtagttt 459  Q
    ||| |||||||| |||| || ||||||    
T  39140698 taacctctaaatttttcctaatagttt 39140672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 414 - 459
Target Start/End: Original strand, 8676945 - 8676990
Alignment:
Q  414 atatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  8676945 atatttcggtccaactcattaatctctaaatcttttttaatagttt 8676990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 394 - 459
Target Start/End: Original strand, 10569131 - 10569196
Alignment:
Q  394 ataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||| || |||||||  |||| || ||||||||||| |||||||||| ||||||    
T  10569131 ataatgttctatcatatacgatatttctatccagcttattaatctctagatctttcttaatagttt 10569196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 467
Target Start/End: Original strand, 10584985 - 10585030
Alignment:
Q  422 gtccaactcattaatctctaaatctttcttagtagtttttctaggt 467  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||    
T  10584985 gtccaactcattaatctctggatctttcttaatagtttttctaggt 10585030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 394 - 443
Target Start/End: Original strand, 19908095 - 19908144
Alignment:
Q  394 ataatgttctatcataaacaatatttcagtccaactcattaatctctaaa 443  Q
    ||||||||| ||||||||| |||||| | |||||||||||||||||||||    
T  19908095 ataatgttcaatcataaaccatatttgaatccaactcattaatctctaaa 19908144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 487
Target Start/End: Complemental strand, 1661639 - 1661545
Alignment:
Q  396 aatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt---ttctaggttttcctctgcctctagtgat 487  Q
    |||||||||||| |||| | ||||| ||||||||| ||||| |||||||||||| || ||||||   || ||||| ||| ||| |||||||||||    
T  1661639 aatgttctatcacaaaccacatttcggtccaactcgttaatttctaaatctttcctaatagtttctcttataggtcttcatctacctctagtgat 1661545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 467
Target Start/End: Complemental strand, 19936681 - 19936609
Alignment:
Q  395 taatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggt 467  Q
    |||||||||||||| ||| ||||||   || ||||||||||  |||||||||||| || ||||||||||||||    
T  19936681 taatgttctatcattaaccatatttggatctaactcattaacatctaaatctttcctaatagtttttctaggt 19936609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 459
Target Start/End: Original strand, 29577184 - 29577267
Alignment:
Q  375 acatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||| || |||| | |||||||||||||||||| || |||||   |||| |||||||||||||| |||||||||| ||||||    
T  29577184 acatgaaataaattatgccataatgttctatcataacca-tattttgatccagctcattaatctctagatctttcttaatagttt 29577267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 481
Target Start/End: Original strand, 36623943 - 36624031
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggttttcctctgcctct 481  Q
    |||||||||| ||| ||||| ||||||   ||||||||||||  ||||||||||||  || |||||| ||||||| ||||||| |||||    
T  36623943 cataatgttcgatcctaaaccatatttggatccaactcattagcctctaaatcttttctaatagtttctctaggtcttcctctacctct 36624031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 464
Target Start/End: Original strand, 990518 - 990588
Alignment:
Q  394 ataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttcta 464  Q
    ||||||||||||||||||| |||| |   ||||||||||||||||||| |||| ||| | |||||| ||||    
T  990518 ataatgttctatcataaaccatatgttgatccaactcattaatctctagatctatctcaatagtttctcta 990588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 419
Target Start/End: Original strand, 28090697 - 28090779
Alignment:
Q  337 acaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatattt 419  Q
    |||||||||| || ||| |||| ||| || ||||||| ||||| || | |||| | |||||||||||||||||||| ||||||    
T  28090697 acaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccatattt 28090779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 29129006 - 29128940
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||||| ||||||   |||||||  |||| ||||||||||||| || ||||||    
T  29129006 cataatgttctatcataaaccatatttggatccaacttgttaacctctaaatctttcctaatagttt 29128940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 447
Target Start/End: Original strand, 40920588 - 40920642
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctt 447  Q
    |||||| |||||||||| || |||||||  ||||||||||||||||||| |||||    
T  40920588 cataatattctatcatataccatatttctatccaactcattaatctctagatctt 40920642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 464
Target Start/End: Original strand, 4590621 - 4590662
Alignment:
Q  423 tccaactcattaatctctaaatctttcttagtagtttttcta 464  Q
    |||||||||| ||||| ||||||||||||| |||||||||||    
T  4590621 tccaactcatcaatctataaatctttcttaatagtttttcta 4590662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 487
Target Start/End: Complemental strand, 6025755 - 6025722
Alignment:
Q  454 tagtttttctaggttttcctctgcctctagtgat 487  Q
    |||||||||||||| |||||||||||||||||||    
T  6025755 tagtttttctaggtcttcctctgcctctagtgat 6025722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 448
Target Start/End: Original strand, 8342938 - 8342995
Alignment:
Q  391 gtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatcttt 448  Q
    |||||||||||| |||| | || |||||||  ||||||||||||||||||| ||||||    
T  8342938 gtcataatgttccatcaaatactatatttctatccaactcattaatctctagatcttt 8342995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 443
Target Start/End: Original strand, 31979654 - 31979711
Alignment:
Q  386 attaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaa 443  Q
    |||| ||||||| ||| |||||||||| |||||| | |||| ||||||||||||||||    
T  31979654 attatgtcataacgttttatcataaaccatatttgaatccagctcattaatctctaaa 31979711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 439
Target Start/End: Original strand, 39776959 - 39777000
Alignment:
Q  398 tgttctatcataaacaatatttcagtccaactcattaatctc 439  Q
    ||||||||||||||| |||||||  |||||||||||||||||    
T  39776959 tgttctatcataaaccatatttcgatccaactcattaatctc 39777000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 452
Target Start/End: Complemental strand, 42501329 - 42501272
Alignment:
Q  395 taatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttctta 452  Q
    |||||||||||||||  | |||||||  |||||||||||||||| || ||||||||||    
T  42501329 taatgttctatcatattccatatttctatccaactcattaatctatagatctttctta 42501272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 487
Target Start/End: Complemental strand, 49377474 - 49377441
Alignment:
Q  454 tagtttttctaggttttcctctgcctctagtgat 487  Q
    |||||||||||||| |||||||||||||||||||    
T  49377474 tagtttttctaggtcttcctctgcctctagtgat 49377441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 459
Target Start/End: Complemental strand, 52292261 - 52292197
Alignment:
Q  394 ataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||| ||||||||||||||||| ||  |||||||||||||||||| || |||||| || ||||||    
T  52292261 ataattttctatcataaacaataattg-gtccaactcattaatctccaagtctttcctaatagttt 52292197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 460
Target Start/End: Original strand, 52633229 - 52633298
Alignment:
Q  391 gtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttt 460  Q
    |||||| ||||||||||||||| ||||||   | ||| |||||||||| |||||||||| || |||||||    
T  52633229 gtcatattgttctatcataaaccatatttatatacaattcattaatctataaatctttcataatagtttt 52633298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 367 - 447
Target Start/End: Complemental strand, 2544842 - 2544762
Alignment:
Q  367 ggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctt 447  Q
    ||||||| ||||| || | |||| | ||||||||||||| |||||| |||||||  ||||||||||| || || |||||||    
T  2544842 ggtcggctacatggatcaaattatgccataatgttctattataaaccatatttcgctccaactcattgatttccaaatctt 2544762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 467
Target Start/End: Original strand, 5275262 - 5275337
Alignment:
Q  391 gtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggt 467  Q
    |||||||| | ||||||||||| ||||||  ||| ||||||||||| | ||| |||||| || ||||||||||||||    
T  5275262 gtcataatatgctatcataaaccatattttggtctaactcattaat-tttaagtctttcataatagtttttctaggt 5275337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 397 - 457
Target Start/End: Complemental strand, 6025824 - 6025764
Alignment:
Q  397 atgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagt 457  Q
    ||||||||||| | || |||||||  ||||||||||||||||||| |||||| ||| ||||    
T  6025824 atgttctatcagataccatatttctatccaactcattaatctctagatcttttttactagt 6025764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 441
Target Start/End: Complemental strand, 6084198 - 6084150
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctcta 441  Q
    |||| ||||||||||||||| ||||||   |||||||||||||||||||    
T  6084198 catattgttctatcataaaccatattttgatccaactcattaatctcta 6084150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 448
Target Start/End: Original strand, 11331262 - 11331318
Alignment:
Q  392 tcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatcttt 448  Q
    ||||||||||  ||||||||| |||||| | ||||||| ||||| ||||||||||||    
T  11331262 tcataatgtttcatcataaaccatatttaaatccaacttattaacctctaaatcttt 11331318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 448
Target Start/End: Original strand, 11489283 - 11489339
Alignment:
Q  392 tcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatcttt 448  Q
    ||||||||||  ||||||||| |||||| | ||||||| ||||| ||||||||||||    
T  11489283 tcataatgtttcatcataaaccatatttaaatccaacttattaacctctaaatcttt 11489339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 448
Target Start/End: Original strand, 19908450 - 19908498
Alignment:
Q  400 ttctatcataaacaatatttcagtccaactcattaatctctaaatcttt 448  Q
    |||||| |||||| |||||| | |||||||| |||||||||||||||||    
T  19908450 ttctattataaaccatatttgaatccaactcgttaatctctaaatcttt 19908498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 445
Target Start/End: Original strand, 37462879 - 37462986
Alignment:
Q  337 acaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaat 436  Q
    |||||||||| |  ||| |||| ||| || ||||||| ||||| || | |||| | ||||||||||||| |||||| |||||| | || ||||||||||     
T  37462879 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatgataaaccatatttga-tcaaactcattaac 37462977  T
Q  437 ctctaaatc 445  Q
    |||||||||    
T  37462978 ctctaaatc 37462986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 478
Target Start/End: Complemental strand, 37591188 - 37591132
Alignment:
Q  423 tccaactcattaatctcta-aatctttcttagtagtttttctaggttttcctctgcc 478  Q
    ||||||||||||||||||| | | ||||||| ||||||||| |||| ||||||||||    
T  37591188 tccaactcattaatctctagattttttcttaatagtttttccaggtcttcctctgcc 37591132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 449
Target Start/End: Complemental strand, 50846785 - 50846729
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttc 449  Q
    |||||||||||||||||||| ||||||  || |||||| ||||| || |||||||||    
T  50846785 cataatgttctatcataaactatattttggttcaactcgttaatttccaaatctttc 50846729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 487
Target Start/End: Original strand, 52073185 - 52073217
Alignment:
Q  455 agtttttctaggttttcctctgcctctagtgat 487  Q
    ||||||||||||| |||||||||||||||||||    
T  52073185 agtttttctaggtcttcctctgcctctagtgat 52073217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 5e-23; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 337 - 452
Target Start/End: Complemental strand, 55008025 - 55007910
Alignment:
Q  337 acaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaat 436  Q
    |||||||||| |  ||| |||| ||| || ||||||| ||||| || | |||| ||||||||| |||||||||||| ||||||| |||||||||||||||    
T  55008025 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgtcataatgatctatcataaaccatatttcggtccaactcattaat 55007926  T
Q  437 ctctaaatctttctta 452  Q
    ||||||||||||||||    
T  55007925 ctctaaatctttctta 55007910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 387 - 465
Target Start/End: Original strand, 30621254 - 30621332
Alignment:
Q  387 ttaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctag 465  Q
    ||||| |||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||| |||||| |||||    
T  30621254 ttaagccataatgttctatcataaaccatatttcggtccaacacattaatctctaaatctttcttaatagtttctctag 30621332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 391 - 487
Target Start/End: Complemental strand, 31339749 - 31339652
Alignment:
Q  391 gtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttctta-gtagtttttctaggttttcctctgcctctagtgat 487  Q
    ||||||||||||||||||  || |||||||  ||||||||||||||||||| ||  |||| |  |||||||||||||| |||||||||||||||||||    
T  31339749 gtcataatgttctatcatgtaccatatttcgatccaactcattaatctctagataattctcatatagtttttctaggtcttcctctgcctctagtgat 31339652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 20105577 - 20105643
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||| |||||||| || ||||||||||||||||||| |||||||| |||||||||||| ||||    
T  20105577 cataatgtcctatcatataccatatttcagtccaactcatcaatctctagatctttcttagtcgttt 20105643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 21945701 - 21945763
Alignment:
Q  397 atgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||| ||||||||||||||||||||||| || ||||||||| || ||||||    
T  21945701 atgttctatcataaaccatatttcagtccaactcattaatttccaaatctttcctaatagttt 21945763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 458
Target Start/End: Complemental strand, 25575044 - 25574982
Alignment:
Q  396 aatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtt 458  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||| |||||||||| |||||    
T  25575044 aatgttctatcataaaccatatttcgatccaactcattaatctctagatctttcttaatagtt 25574982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 459
Target Start/End: Original strand, 26024853 - 26024975
Alignment:
Q  337 acaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaat 436  Q
    |||||||||| |  ||| |||| ||| |||||||||| ||||| || | ||||   |||||||||||||||||||| || | ||  ||||||||||||||    
T  26024853 acaacaaccaagccttatcccactaagtgaggtcggctacatggataaaattacaccataatgttctatcataaaccatgtctcgatccaactcattaat 26024952  T
Q  437 ctctaaatctttcttagtagttt 459  Q
    ||||| |||||||||| ||||||    
T  26024953 ctctagatctttcttaatagttt 26024975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 375 - 487
Target Start/End: Complemental strand, 29399045 - 29398935
Alignment:
Q  375 acatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggttttcctc 474  Q
    |||||||| | |||| | ||||||||||||||||||||  ||||||  |||||||| ||||| || |||  |||| ||  ||||||||||||| ||||||    
T  29399045 acatgaatcaaattacgccataatgttctatcataaaccttatttcgttccaactcgttaatttcaaaacatttccta--agtttttctaggtcttcctc 29398948  T
Q  475 tgcctctagtgat 487  Q
    |||||||||||||    
T  29398947 tgcctctagtgat 29398935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 487
Target Start/End: Original strand, 13805324 - 13805430
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttct---tag---------tagtttttctaggttttcctctgcctc 480  Q
    |||||||||||||||||||| ||||||| |||||||| |||| |||| ||||||||||   |||         |||||||||||||||||||||||||||    
T  13805324 cataatgttctatcataaaccatatttccgtccaacttattactctcaaaatctttcttcatagtttctcttatagtttttctaggttttcctctgcctc 13805423  T
Q  481 tagtgat 487  Q
    |||||||    
T  13805424 tagtgat 13805430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 423 - 473
Target Start/End: Complemental strand, 31459187 - 31459137
Alignment:
Q  423 tccaactcattaatctctaaatctttcttagtagtttttctaggttttcct 473  Q
    ||||||||||||||||||||||||||| || |||||||||||||| |||||    
T  31459187 tccaactcattaatctctaaatctttcctaatagtttttctaggtcttcct 31459137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 337 - 459
Target Start/End: Complemental strand, 51422009 - 51421887
Alignment:
Q  337 acaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaat 436  Q
    |||||||||| | |||| |||| ||| |||| | ||| ||||| || | |||| |||||||||||||||||||||| || |||   ||||| |||||||     
T  51422009 acaacaaccaagctttatcccactaagtgagattggctacatggatcaaattacgtcataatgttctatcataaaccatttttggatccaattcattaac 51421910  T
Q  437 ctctaaatctttcttagtagttt 459  Q
    ||||||||||||| || ||||||    
T  51421909 ctctaaatctttcctaatagttt 51421887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 463
Target Start/End: Original strand, 53518382 - 53518452
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttct 463  Q
    |||| ||||||||||||||| ||||||   ||||||||||||| ||||||||||||| || ||||||||||    
T  53518382 catagtgttctatcataaaccatatttagatccaactcattaacctctaaatctttcctattagtttttct 53518452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 53540513 - 53540447
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||| || |||||| || ||||||    
T  53540513 cataatgttctatcataaaccatatttttgtccaactcattaatctccaagtctttcctaatagttt 53540447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 452
Target Start/End: Complemental strand, 32312710 - 32312650
Alignment:
Q  392 tcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttctta 452  Q
    ||||||| ||||||||| ||| | | |||||||||||||||||||||| ||||||||||||    
T  32312710 tcataatattctatcattaaccacacttcagtccaactcattaatctcaaaatctttctta 32312650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 433
Target Start/End: Original strand, 39100539 - 39100635
Alignment:
Q  337 acaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcatt 433  Q
    |||||||||| |  ||| |||| ||| || ||||||| ||||| ||||||||| | ||||||||||||| |||||||||||||   |||||||||||    
T  39100539 acaacaaccaagccttatcccactaagtggggtcggctacatggattatattacgccataatgttctatgataaacaatatttggatccaactcatt 39100635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 367 - 442
Target Start/End: Complemental strand, 30480372 - 30480297
Alignment:
Q  367 ggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaa 442  Q
    ||||||| ||||| || | |||| |||||||  ||||||||||||| |||||| ||||||| ||||||||||||||    
T  30480372 ggtcggctacatggatcaaattacgtcataaaattctatcataaaccatattttagtccaattcattaatctctaa 30480297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 440
Target Start/End: Complemental strand, 34379626 - 34379579
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctct 440  Q
    |||||| ||||||||||||| ||||||| |||||||||||||||||||    
T  34379626 cataatattctatcataaaccatatttcggtccaactcattaatctct 34379579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 443
Target Start/End: Original strand, 34208328 - 34208378
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaa 443  Q
    |||||||||||||||||||| ||||||   |||||||||||||||||||||    
T  34208328 cataatgttctatcataaaccatatttggatccaactcattaatctctaaa 34208378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 451
Target Start/End: Complemental strand, 41192284 - 41192226
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttctt 451  Q
    |||||||||||| |||| || |||||||  ||||||||||||||||||| |||||||||    
T  41192284 cataatgttctaccatataccatatttctatccaactcattaatctctagatctttctt 41192226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 42639079 - 42639145
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||||||||||| | || |||||||  ||||||||||||||| ||| |||||||||| ||||||    
T  42639079 cataatgttctatcaaataccatatttctatccaactcattaatcgctagatctttcttaatagttt 42639145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 458
Target Start/End: Complemental strand, 44385054 - 44384988
Alignment:
Q  392 tcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtt 458  Q
    ||||||||||||||||||||| |||||    ||||||| ||||||||||| |||||||||| |||||    
T  44385054 tcataatgttctatcataaaccatattaatatccaacttattaatctctagatctttcttaatagtt 44384988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 47372874 - 47372808
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||||||||| ||| || |||||||  ||||||||||||||||||  |||||| ||||||||||    
T  47372874 cataatgttctataatataccatatttctatccaactcattaatctctggatctttattagtagttt 47372808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 458
Target Start/End: Original strand, 27049236 - 27049301
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtt 458  Q
    |||||||||| ||||||||| ||||||    ||||||||||||||| ||||||||||||| |||||    
T  27049236 cataatgttcgatcataaaccatatttggaaccaactcattaatctataaatctttcttaatagtt 27049301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 398 - 459
Target Start/End: Complemental strand, 31043290 - 31043229
Alignment:
Q  398 tgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||| |||| ||||||   ||||||||||||||||||||||||||| || ||||||    
T  31043290 tgttctatcacaaaccatatttggatccaactcattaatctctaaatctttcctaatagttt 31043229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 454 - 487
Target Start/End: Original strand, 34233156 - 34233189
Alignment:
Q  454 tagtttttctaggttttcctctgcctctagtgat 487  Q
    ||||||||||||||||||||||||||||||||||    
T  34233156 tagtttttctaggttttcctctgcctctagtgat 34233189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 394 - 459
Target Start/End: Original strand, 56439631 - 56439696
Alignment:
Q  394 ataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||||||||||||||| |||||||  ||||||| |||||| || ||||||||| || ||||||    
T  56439631 ataatgttctatcataaaccatatttcgatccaactaattaatttccaaatctttcataatagttt 56439696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 459
Target Start/End: Original strand, 45204900 - 45204964
Alignment:
Q  395 taatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||| ||||||   ||||||| ||||| ||||||||||||| || ||||||    
T  45204900 taatgttctatcataaaccatatttggatccaacttattaaactctaaatctttcctaatagttt 45204964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 452
Target Start/End: Original strand, 55388273 - 55388329
Alignment:
Q  396 aatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttctta 452  Q
    ||||||||||||||||  |||||||  || |||||||||||||| ||||||||||||    
T  55388273 aatgttctatcataaatcatatttcgatctaactcattaatctccaaatctttctta 55388329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 433
Target Start/End: Original strand, 20601693 - 20601751
Alignment:
Q  375 acatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcatt 433  Q
    |||||||| | |||| |||||||||||||||||||||  |||||| | |||||||||||    
T  20601693 acatgaatcaaattacgtcataatgttctatcataaatcatatttgaatccaactcatt 20601751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 26037564 - 26037630
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||| ||||||||||||||| ||||||   ||||||||||| | ||||||||||||| || ||||||    
T  26037564 catagtgttctatcataaaccatatttggatccaactcattcacctctaaatctttcctaatagttt 26037630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 463
Target Start/End: Original strand, 31403093 - 31403163
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttct 463  Q
    ||||||| ||||||||| || | |||||  ||||||| ||||||||||| ||||||| || ||||||||||    
T  31403093 cataatgctctatcatataccacatttctatccaactaattaatctctagatctttcataatagtttttct 31403163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 199
Target Start/End: Original strand, 33792189 - 33792227
Alignment:
Q  161 tccacaatacgctatttagtacaaagtgttgttaaatag 199  Q
    |||| |||| |||||||||||||||||||||||||||||    
T  33792189 tccataataggctatttagtacaaagtgttgttaaatag 33792227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 37042723 - 37042789
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||||||||||| | ||  ||||||  ||||||||| ||||||||| |||||||||| ||||||    
T  37042723 cataatgttctatcaaataccgtatttctatccaactcaataatctctagatctttcttaatagttt 37042789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 459
Target Start/End: Original strand, 2557732 - 2557797
Alignment:
Q  394 ataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||||||||||||||| |||||||  |||||||| |||||||  | ||| |||||| ||||||    
T  2557732 ataatgttctatcataaaccatatttcgatccaactcgttaatcttcagatccttcttaatagttt 2557797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 26510611 - 26510558
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatct 446  Q
    ||||||||||||||  |||| ||||||   ||||||||||||||||||||||||    
T  26510611 cataatgttctatcgcaaaccatatttggatccaactcattaatctctaaatct 26510558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 487
Target Start/End: Complemental strand, 47147523 - 47147490
Alignment:
Q  454 tagtttttctaggttttcctctgcctctagtgat 487  Q
    |||||||||||||| |||||||||||||||||||    
T  47147523 tagtttttctaggtcttcctctgcctctagtgat 47147490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 438
Target Start/End: Complemental strand, 51438668 - 51438623
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatct 438  Q
    ||||||||| ||| |||||| |||||||| ||||||||||||||||    
T  51438668 cataatgttatattataaaccatatttcattccaactcattaatct 51438623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 56049824 - 56049779
Alignment:
Q  165 caatacgctatttagtacaaagtgttgttaaatagcaacgatagta 210  Q
    |||||||| ||||||||||||||||||| |||||||| | ||||||    
T  56049824 caatacgcaatttagtacaaagtgttgtcaaatagcagctatagta 56049779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 364 - 448
Target Start/End: Complemental strand, 1793714 - 1793630
Alignment:
Q  364 tgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatcttt 448  Q
    |||| ||||| |||||||| | |||| |||||| || |||||||||||  ||||||   ||||||||||| | ||||||||||||    
T  1793714 tgagatcggctacatgaatcaaattacgtcatagtgctctatcataaatcatatttggatccaactcattgacctctaaatcttt 1793630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 457
Target Start/End: Complemental strand, 6843838 - 6843774
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagt 457  Q
    ||||||||||||| ||| |  |||||||  || |||||||||||||||| |||||||||| ||||    
T  6843838 cataatgttctattatataacatatttctatcaaactcattaatctctagatctttcttaatagt 6843774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Original strand, 26025008 - 26025044
Alignment:
Q  423 tccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  26025008 tccaactcattaatctctagatctttcttaatagttt 26025044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Complemental strand, 47147566 - 47147530
Alignment:
Q  423 tccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  47147566 tccaactcattaatctctagatctttcttaatagttt 47147530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 454 - 486
Target Start/End: Complemental strand, 49987558 - 49987526
Alignment:
Q  454 tagtttttctaggttttcctctgcctctagtga 486  Q
    |||||||||||||| ||||||||||||||||||    
T  49987558 tagtttttctaggtcttcctctgcctctagtga 49987526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 459
Target Start/End: Original strand, 52360013 - 52360069
Alignment:
Q  403 tatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||| | ||||  |||||||||||||||||| ||||||||| || ||||||    
T  52360013 tatcataaaccaaattttggtccaactcattaatctccaaatctttcctaatagttt 52360069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 445
Target Start/End: Complemental strand, 56375569 - 56375461
Alignment:
Q  337 acaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaat 436  Q
    |||||||||| || ||| |||| ||| |||||||||| ||||| || | || | |||||| |||||||||||| || | ||||   ||||||||||| |     
T  56375569 acaacaaccaagtcttatcccactaagtgaggtcggctacatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattcac 56375470  T
Q  437 ctctaaatc 445  Q
    |||||||||    
T  56375469 ctctaaatc 56375461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 8e-22; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 392 - 465
Target Start/End: Complemental strand, 29601116 - 29601043
Alignment:
Q  392 tcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctag 465  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||| ||| ||||||||    
T  29601116 tcataatgttctatcataaactatatttgaatccaactcattaatctctaaatctttcttaatagcttttctag 29601043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 395 - 487
Target Start/End: Original strand, 50237695 - 50237786
Alignment:
Q  395 taatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggttttcctctgcctctagtgat 487  Q
    ||||||||||||||| ||||||||||  ||||||||| |||||||| ||||||||||| ||| ||||||||||| | ||||||||||||||||    
T  50237695 taatgttctatcatatacaatatttctatccaactcaataatctctgaatctttcttaatag-ttttctaggttctactctgcctctagtgat 50237786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 400 - 459
Target Start/End: Complemental strand, 29475902 - 29475843
Alignment:
Q  400 ttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||    
T  29475902 ttctatcataaacaatatttcaatccaactcattaatctctagatctttcttaatagttt 29475843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 393 - 475
Target Start/End: Complemental strand, 19758110 - 19758028
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggttttcctct 475  Q
    |||||||||||||||||||| |||||    |||||||||||||||||||||| |||| || |||||||||||||| |||||||    
T  19758110 cataatgttctatcataaaccatattgagatccaactcattaatctctaaatatttcctaatagtttttctaggtcttcctct 19758028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 367 - 484
Target Start/End: Complemental strand, 36304215 - 36304098
Alignment:
Q  367 ggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctagg 466  Q
    ||||||| ||||| || | |||| | |||||||| ||||||||||| ||||||   ||||||||||||||||||| |||||||||| ||||||| |||||    
T  36304215 ggtcggctacatggatcaaattacgccataatgtcctatcataaaccatattttgatccaactcattaatctctagatctttcttaatagttttactagg 36304116  T
Q  467 ttttcctctgcctctagt 484  Q
    | | |  |||||||||||    
T  36304115 tctacaactgcctctagt 36304098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 40116397 - 40116450
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatct 446  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  40116397 cataatgttctatcataaaccatatttcggtccaactcattaatctctaaatct 40116450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 364 - 459
Target Start/End: Original strand, 23534600 - 23534695
Alignment:
Q  364 tgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||| | ||||| || | |||| | |||||||||||||||||||  ||||| ||||||||||||||||||||||| |||||| || ||||||    
T  23534600 tgaggtcgactacatggatcaaattacgccataatgttctatcataaatcatattacagtccaactcattaatctctaagtctttcctaatagttt 23534695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 396 - 459
Target Start/End: Original strand, 40116530 - 40116593
Alignment:
Q  396 aatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||| || || ||||||    
T  40116530 aatgttctatcataaaccatatttcggtccaactcattaatctctaaatctatcctaatagttt 40116593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 474
Target Start/End: Complemental strand, 19737207 - 19737126
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggttttcctc 474  Q
    ||||||||| |||||||||| |||||    |||||||||||||||||||||| |||| || |||||||||||||| ||||||    
T  19737207 cataatgttttatcataaaccatattgagatccaactcattaatctctaaatatttcctaatagtttttctaggtcttcctc 19737126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 459
Target Start/End: Original strand, 45289151 - 45289216
Alignment:
Q  394 ataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||||||||||||| || ||||||    
T  45289151 ataatgttctatcataaaccatatttggatccaactcattaatctctaaatctttcctaatagttt 45289216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 449
Target Start/End: Complemental strand, 54128602 - 54128546
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttc 449  Q
    |||||||||||||||||||| ||||||  |||||||||||| | |||||||||||||    
T  54128602 cataatgttctatcataaaccatatttgggtccaactcattgacctctaaatctttc 54128546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 55244501 - 55244442
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttctta 452  Q
    ||||||||||||||||| || |||||||  ||||||||||||||||||| || |||||||    
T  55244501 cataatgttctatcatataccatatttctatccaactcattaatctctagatttttctta 55244442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 39600740 - 39600806
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||| ||||| | ||||   ||||||||||||| |||||||||||||||| ||||||    
T  39600740 cataatgttctatcgtaaaccagatttggatccaactcattaacctctaaatctttcttaatagttt 39600806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 463
Target Start/End: Original strand, 41842582 - 41842652
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttct 463  Q
    ||||||||||||||| |||| |||||||| || |||||||||| ||||| |||| ||||  ||||||||||    
T  41842582 cataatgttctatcaaaaaccatatttcaatctaactcattaacctctagatctatctttatagtttttct 41842652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 449
Target Start/End: Original strand, 48712132 - 48712190
Alignment:
Q  391 gtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttc 449  Q
    ||||||||||| |||||||||| |||||| | |||||||||| ||| ||||||||||||    
T  48712132 gtcataatgttatatcataaaccatatttgaatccaactcatcaatatctaaatctttc 48712190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 49841839 - 49841773
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||||||||||||| || |||||||  |||||||||||||||| || |||||| ||| ||||||    
T  49841839 cataatgttctatcatataccatatttcgatccaactcattaatctttagatctttgttaatagttt 49841773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 454 - 487
Target Start/End: Original strand, 33755474 - 33755507
Alignment:
Q  454 tagtttttctaggttttcctctgcctctagtgat 487  Q
    ||||||||||||||||||||||||||||||||||    
T  33755474 tagtttttctaggttttcctctgcctctagtgat 33755507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 438
Target Start/End: Complemental strand, 40991654 - 40991609
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatct 438  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||    
T  40991654 cataatgttctatcataaaccatattttggtccaactcattaatct 40991609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 44571643 - 44571578
Alignment:
Q  400 ttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctag 465  Q
    ||||||||||||| ||||||   |||||||||||||||||||||| |||| |  ||||||||||||    
T  44571643 ttctatcataaaccatatttggatccaactcattaatctctaaatatttccttatagtttttctag 44571578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 450
Target Start/End: Complemental strand, 49888436 - 49888356
Alignment:
Q  367 ggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttct 450  Q
    ||||||| ||||| || | |||| |||||||||||   |||||||| ||||||||||||||||||||||| || ||||| ||||    
T  49888436 ggtcggctacatggatcaaattacgtcataatgtt---tcataaaccatatttcagtccaactcattaatttcaaaatcattct 49888356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 441
Target Start/End: Complemental strand, 32170684 - 32170580
Alignment:
Q  337 acaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaat 436  Q
    |||||||||| | |||| | || ||| || ||||||| ||||| || | |||| ||||||||||| ||||||| || |||||||  ||||||| ||||||    
T  32170684 acaacaaccaagctttatctcactaagtggggtcggctacatggatcaaattatgtcataatgttatatcatagaccatatttctatccaacttattaat 32170585  T
Q  437 ctcta 441  Q
    |||||    
T  32170584 ctcta 32170580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 445
Target Start/End: Complemental strand, 48508514 - 48508406
Alignment:
Q  337 acaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaat 436  Q
    |||||||||| |  ||| |||| ||| || ||||||| ||||| || | |||| | |||| ||||||||||||||| |||||| | ||||||||||| |     
T  48508514 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttgaatccaactcattgac 48508415  T
Q  437 ctctaaatc 445  Q
    |||||||||    
T  48508414 ctctaaatc 48508406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 459
Target Start/End: Original strand, 54365008 - 54365100
Alignment:
Q  367 ggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||| ||||| || | |||| |||||| ||||||||||||||| ||||||  ||| ||| |||||||||| || |||||| || ||||||    
T  54365008 ggtcggctacatggatcaaattacgtcatagtgttctatcataaaccatattttggtctaacacattaatctccaagtctttcctaatagttt 54365100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 459
Target Start/End: Original strand, 37534264 - 37534327
Alignment:
Q  396 aatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||| ||||||||| |||||||| || || ||||||||||| | |||||||||| ||||||    
T  37534264 aatgttcaatcataaactatatttcaatcaaattcattaatctcaagatctttcttaatagttt 37534327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 39235361 - 39235295
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||| ||||| ||||||   |||||||||||||  |||||||||||| || ||||||    
T  39235361 cataatgttctatcgtaaaccatatttagatccaactcattaacttctaaatctttcctaatagttt 39235295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 449
Target Start/End: Original strand, 42510049 - 42510131
Alignment:
Q  367 ggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttc 449  Q
    ||||||| ||||| || | |||| | |||||||||| ||||||||| ||||||  |||||||||||| || || |||||||||    
T  42510049 ggtcggctacatggatcaaattacgccataatgttcaatcataaaccatattttggtccaactcatttatttccaaatctttc 42510131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 438
Target Start/End: Original strand, 14415263 - 14415363
Alignment:
Q  337 acaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaat 436  Q
    |||||||||| || ||| |||| ||| || ||||||| |||||| | | |||| | ||||||||| |||||||||| |||| |  |||||||||||||||    
T  14415263 acaacaaccaagtcttatcccactaagtggggtcggctacatga-tcaaattatgccataatgttatatcataaaccatatgtgggtccaactcattaat 14415361  T
Q  437 ct 438  Q
    ||    
T  14415362 ct 14415363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 23790456 - 23790392
Alignment:
Q  165 caatacgctatttagtacaaagtgttgttaaatagcaacg--atagtactgtagcatagcagaat 227  Q
    |||||||||||||||||| | ||||||| |||||||| ||  |||| ||||||||||||| ||||    
T  23790456 caatacgctatttagtactaggtgttgtcaaatagcagcgctatagcactgtagcatagcggaat 23790392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 487
Target Start/End: Original strand, 31261074 - 31261107
Alignment:
Q  454 tagtttttctaggttttcctctgcctctagtgat 487  Q
    |||||||||||||| |||||||||||||||||||    
T  31261074 tagtttttctaggtcttcctctgcctctagtgat 31261107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 449
Target Start/End: Complemental strand, 37779101 - 37779044
Alignment:
Q  392 tcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttc 449  Q
    ||||||||||||||||||||| |||||    || | ||||||||||||||||||||||    
T  37779101 tcataatgttctatcataaaccatattcggatctagctcattaatctctaaatctttc 37779044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 435
Target Start/End: Original strand, 40106672 - 40106721
Alignment:
Q  386 attaagtcataatgttctatcataaacaatatttcagtccaactcattaa 435  Q
    |||| |||||||||||||||||||||| ||||||   |||||||||||||    
T  40106672 attatgtcataatgttctatcataaaccatatttggatccaactcattaa 40106721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 41971327 - 41971376
Alignment:
Q  391 gtcataatgttctatcataaacaatatttcagtccaactcattaatctct 440  Q
    ||||||||||||||||||| |  ||||||| || ||||||||||||||||    
T  41971327 gtcataatgttctatcatatatcatatttctgtacaactcattaatctct 41971376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 459
Target Start/End: Complemental strand, 49042186 - 49042093
Alignment:
Q  367 ggtcggcaacatgaattatattaagtcataatgttctatcataaa-caatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||| ||||| || | |||| | |||| |||||||||||||| | ||||||   ||||||||||||| ||||||||||||| || ||||||    
T  49042186 ggtcggctacatggatcaaattacgccatagtgttctatcataaaaccatatttggatccaactcattaacctctaaatctttcctaatagttt 49042093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Original strand, 19162676 - 19162712
Alignment:
Q  423 tccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||||||||||||||||||||||| || ||||||    
T  19162676 tccaactcattaatctctaaatctttcctaatagttt 19162712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 367 - 439
Target Start/End: Original strand, 34844606 - 34844678
Alignment:
Q  367 ggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctc 439  Q
    ||||||| ||||| || ||||||   ||||||||||||||||||||| ||||   ||||| ||||||||||||    
T  34844606 ggtcggctacatggatcatattataccataatgttctatcataaacagtattctggtccacctcattaatctc 34844678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 443
Target Start/End: Complemental strand, 38431069 - 38431021
Alignment:
Q  395 taatgttctatcataaacaatatttcagtccaactcattaatctctaaa 443  Q
    |||||||||||||||||| ||||||   ||||||||||||| |||||||    
T  38431069 taatgttctatcataaaccatatttggatccaactcattaacctctaaa 38431021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Original strand, 41452829 - 41452865
Alignment:
Q  423 tccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  41452829 tccaactcattaatctctagatctttcttaatagttt 41452865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 487
Target Start/End: Original strand, 41482272 - 41482304
Alignment:
Q  455 agtttttctaggttttcctctgcctctagtgat 487  Q
    ||||||||||||| |||||||||||||||||||    
T  41482272 agtttttctaggtcttcctctgcctctagtgat 41482304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 402 - 487
Target Start/End: Complemental strand, 11412921 - 11412837
Alignment:
Q  402 ctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggttttcctctgcctctagtgat 487  Q
    ||||||||||| ||||||   |||||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  11412921 ctatcataaaccatatttggatccaactcattaatctctaa-tctttcctaatagtttttctaggttttcctctggctctagtgat 11412837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 486
Target Start/End: Original strand, 13240822 - 13240915
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggttttcctctgcctctagtga 486  Q
    ||||||| | |||||||||| | |||||  | |||||| |||||||||| |||||||||| |||||||||||||| ||||||||||||||||||    
T  13240822 cataatggtttatcataaaccaaatttcgattcaactcgttaatctctagatctttcttaatagtttttctaggtcttcctctgcctctagtga 13240915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 392 - 452
Target Start/End: Original strand, 37452284 - 37452344
Alignment:
Q  392 tcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttctta 452  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||    
T  37452284 tcataatgttctatcataaaccatatttctgtccaactcattaatctctaattctttctta 37452344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 336 - 451
Target Start/End: Original strand, 19336895 - 19337010
Alignment:
Q  336 cacaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaa 435  Q
    ||||||||||| | |||| |||| ||| || | | ||| ||||| || | |||| | |||||||||||||||||||| |||||||  |||||||||||||    
T  19336895 cacaacaaccaagctttatcccaataagtgggattggctacatggatcaaattacgccataatgttctatcataaaccatatttcgatccaactcattaa 19336994  T
Q  436 tctctaaatctttctt 451  Q
    ||||||||||||||||    
T  19336995 tctctaaatctttctt 19337010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 393 - 449
Target Start/End: Complemental strand, 6219188 - 6219132
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttc 449  Q
    |||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||    
T  6219188 cataatgttctatcataaaccatatttcggtccaactcactaatctctaaatctttc 6219132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 45077948 - 45077880
Alignment:
Q  397 atgttctatcataaacaatatttcagtccaactc--attaatctctaaatctttcttagtagtttttct 463  Q
    |||||||||||||||| |||||||  ||||||||  |||||||||||||||||||||| ||||||||||    
T  45077948 atgttctatcataaactatatttcgatccaactctcattaatctctaaatctttcttaatagtttttct 45077880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 391 - 459
Target Start/End: Complemental strand, 33287646 - 33287578
Alignment:
Q  391 gtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||||||| |||||||  || ||||||||||| |||| |||||||||| ||||||    
T  33287646 gtcataatgttctatcataaaccatatttcgatctaactcattaatttctagatctttcttaatagttt 33287578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 459
Target Start/End: Complemental strand, 26670984 - 26670925
Alignment:
Q  400 ttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||||||||  ||||||  ||||||||||||||||||||||||||||||| ||||||    
T  26670984 ttctatcataaatcatattttggtccaactcattaatctctaaatctttcttaatagttt 26670925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 459
Target Start/End: Original strand, 33625256 - 33625323
Alignment:
Q  392 tcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||||||||||||||||| ||||| |  ||||||||||||||||||| || ||||||| ||||||    
T  33625256 tcataatgttctatcataaaccatattactttccaactcattaatctctagatatttcttaatagttt 33625323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 487
Target Start/End: Complemental strand, 7615492 - 7615399
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggttttcctctgcctctagtgat 487  Q
    ||||||||| ||||||| || || ||||  ||||| ||||| ||||||||| |||||||| ||||||| |||||| ||||| |||||||||||||    
T  7615492 cataatgttttatcatataccat-tttctatccaattcattcatctctaaacctttcttaatagttttcctaggtcttcctttgcctctagtgat 7615399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 9496089 - 9496023
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||||| ||||||   ||||||||||||| |||||||||||||| | ||||||    
T  9496089 cataatgttctatcataaaccatatttggatccaactcattaacctctaaatctttctgaatagttt 9496023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 487
Target Start/End: Original strand, 13474273 - 13474370
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaa-atctttcttagta--gtttttctaggttttcctctgcctctagtgat 487  Q
    ||||||||  |||||||||| ||||| |  |||||||||||||||||||  |||||||||| ||  |||||||||||| ||||| |||||||||||||    
T  13474273 cataatgtattatcataaaccatattccgatccaactcattaatctctattatctttcttaatatagtttttctaggtcttcctttgcctctagtgat 13474370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 42149719 - 42149785
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||||| |||||||  |||| |||| ||||||||| |||||||||| ||||||    
T  42149719 cataatgttctatcataaaccatatttctatccagctcaataatctctagatctttcttaatagttt 42149785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 33504447 - 33504380
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcatt-aatctctaaatctttcttagtagttt 459  Q
    ||||||||||||||||| || |||||||| ||||||| ||| |||||||| |||||||||| ||||||    
T  33504447 cataatgttctatcatataccatatttcaatccaacttattaaatctctagatctttcttaatagttt 33504380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 487
Target Start/End: Complemental strand, 2377275 - 2377181
Alignment:
Q  394 ataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttc-taggttttcctctgcctctagtgat 487  Q
    |||||||||||||||| || ||| ||   |||||||||||| ||||||||||||| ||| |||||| || ||||| ||| |||| ||||||||||    
T  2377275 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttcatctgtctctagtgat 2377181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 459
Target Start/End: Original strand, 12882048 - 12882170
Alignment:
Q  337 acaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaat 436  Q
    |||||||||| |  ||| |||| ||| |||||| ||| ||||| || | |||| | || |||||||||||| |||| ||||||   |||||||||||||     
T  12882048 acaacaaccaagccttatcccactaagtgaggtaggctacatggatcaaattacgccaaaatgttctatcacaaaccatatttggatccaactcattaac 12882147  T
Q  437 ctctaaatctttcttagtagttt 459  Q
    |||||||| |||| |||||||||    
T  12882148 ctctaaatatttcctagtagttt 12882170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 459
Target Start/End: Complemental strand, 13149611 - 13149489
Alignment:
Q  337 acaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaat 436  Q
    |||||||||| || ||| | |||||| |||| ||||| | ||| || | |||| |||||||||||||||||| ||| ||||||   | | |||||||||     
T  13149611 acaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaacgatatttggattctactcattaac 13149512  T
Q  437 ctctaaatctttcttagtagttt 459  Q
    ||||||||||||| || ||||||    
T  13149511 ctctaaatctttcataatagttt 13149489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 23915752 - 23915818
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||| ||||||||||||||| ||| ||| ||||| |||||||||||||| || ||||||| ||||||    
T  23915752 catagtgttctatcataaaccatagttctgtccacctcattaatctctagatttttcttaatagttt 23915818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 31254511 - 31254445
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||||||| |||||||  |||||||  | ||||||||||||||||| |||||||||| ||||||    
T  31254511 cataatgttctgtcataaatcatatttctattcaactcattaatctctagatctttcttaatagttt 31254445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 38435175 - 38435109
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||| ||||||||| | |||||  |||||| |||||||||||| |||||||||| ||||||    
T  38435175 cataatgttcaatcataaaccaaatttcgatccaacacattaatctctagatctttcttaatagttt 38435109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 459
Target Start/End: Original strand, 9556430 - 9556494
Alignment:
Q  395 taatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||| |||| |   ||||||||||||||| ||| |||||||||| ||||||    
T  9556430 taatgttctatcataaaccatatcttgatccaactcattaatcactagatctttcttaatagttt 9556494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 459
Target Start/End: Original strand, 26784402 - 26784465
Alignment:
Q  396 aatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||| ||||||| || |||||||  | ||||||||||||||||| |||||||||| ||||||    
T  26784402 aatgttttatcatataccatatttctattcaactcattaatctctatatctttcttaatagttt 26784465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 32402723 - 32402668
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatcttt 448  Q
    ||||||||||||||||| ||  ||||||  ||||||||||||||||||| ||||||    
T  32402723 cataatgttctatcatataccttatttctatccaactcattaatctctagatcttt 32402668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 436
Target Start/End: Complemental strand, 36366859 - 36366816
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaat 436  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||    
T  36366859 cataatgttctattataaaccatatttcggtccaactcattaat 36366816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 459
Target Start/End: Original strand, 43751977 - 43752072
Alignment:
Q  364 tgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||| ||||| || | ||||   |||| |||||||||||| || || |||| ||||||||||||||| || ||||||||| || ||||||    
T  43751977 tgaggtcggccacatggatcaaattacaacatagtgttctatcatacaccatctttcggtccaactcattaatttccaaatctttcctaatagttt 43752072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 3481377 - 3481311
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||||||||||||| || ||||||| ||||||||  ||||| || ||||||||| || ||||||    
T  3481377 cataatgttctatcatagaccatatttctgtccaacttgttaatttccaaatctttcctaatagttt 3481311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 8197600 - 8197666
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||| |||||||||| |  |||||||  |||||||||||||||| || |||||||||| ||||||    
T  8197600 cataatattctatcatatatcatatttctatccaactcattaatctttagatctttcttaatagttt 8197666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 8202360 - 8202426
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||| |||||||||| |  |||||||  |||||||||||||||| || |||||||||| ||||||    
T  8202360 cataatattctatcatatatcatatttctatccaactcattaatctttagatctttcttaatagttt 8202426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 12141767 - 12141701
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||||||||||||| || ||||||   ||||| |||||||||||||| |||||| || ||||||    
T  12141767 cataatgttctatcatataccatatttggatccaagtcattaatctctaagtctttcctaatagttt 12141701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 447
Target Start/End: Original strand, 32364980 - 32365034
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctt 447  Q
    ||||||||||||||||| |||||| | | ||||||||||||||| || |||||||    
T  32364980 cataatgttctatcatacacaatagtccggtccaactcattaatttccaaatctt 32365034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 37470192 - 37470258
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||  | |||||||  ||||||||||||||||||| |||| || || ||||||    
T  37470192 cataatgttctatcatatgccatatttcgatccaactcattaatctctagatctgtcctaatagttt 37470258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 432
Target Start/End: Complemental strand, 41545683 - 41545589
Alignment:
Q  338 caacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcat 432  Q
    |||||| ||||| ||| | |||||| |||| ||||| | || ||| | ||||||||||| ||||||||||||||| |||||| | | ||||||||    
T  41545683 caacaatcatgtattatctcattaagtgagatcggctaaataaatcaaattaagtcatagtgttctatcataaaccatatttgaattcaactcat 41545589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 18103749 - 18103794
Alignment:
Q  163 cacaatacgctatttagtacaaagtgttgttaaatagcaacgatag 208  Q
    |||||||| |||||| |||||||||||||| |||||||||| ||||    
T  18103749 cacaatacactatttggtacaaagtgttgtcaaatagcaaccatag 18103794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 41778627 - 41778688
Alignment:
Q  348 gttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcata 409  Q
    |||||| |||| ||| ||||||| ||||||||||| | || | |||||||||||||||||||    
T  41778627 gttttatcccactaagtgaggtcagcaacatgaatcaaatgatgtcataatgttctatcata 41778688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 449
Target Start/End: Complemental strand, 18959134 - 18959078
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttc 449  Q
    ||||||||||||||||| || ||||||   ||||||||||||||||| || ||||||    
T  18959134 cataatgttctatcatagaccatattttgatccaactcattaatctccaagtctttc 18959078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 459
Target Start/End: Complemental strand, 21834779 - 21834711
Alignment:
Q  391 gtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||| ||||||||||||||| | ||||   |||||||||||||||| ||||| |||| || ||||||    
T  21834779 gtcatattgttctatcataaaccaaatttagatccaactcattaatctataaatatttcctaatagttt 21834711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 8e-19; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 367 - 459
Target Start/End: Complemental strand, 8364805 - 8364713
Alignment:
Q  367 ggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||| ||||| || | |||| | |||||||||||||||||||| || ||||||||||||| |||||| ||||||||||||||| ||||||    
T  8364805 ggtcggctacatggatcaaattacgccataatgttctatcataaaccatgtttcagtccaacttattaatttctaaatctttcttaatagttt 8364713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 337 - 452
Target Start/End: Original strand, 34508 - 34623
Alignment:
Q  337 acaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaat 436  Q
    |||||||||| || ||| |||| ||| || |||| || ||||| || | |||| | |||||||||||||||||||| |||||||| ||||||||||||||    
T  34508 acaacaaccaagtcttatcccactaagtggggtcagctacatggatcaaattacgccataatgttctatcataaaccatatttcaatccaactcattaat 34607  T
Q  437 ctctaaatctttctta 452  Q
    || || ||||||||||    
T  34608 ctttagatctttctta 34623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 395 - 464
Target Start/End: Original strand, 1748006 - 1748075
Alignment:
Q  395 taatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttcta 464  Q
    ||||||||||||||| || |||||||  |||||||||||||||||||||| |||||||||||||| ||||    
T  1748006 taatgttctatcatatactatatttctatccaactcattaatctctaaatttttcttagtagtttctcta 1748075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 386 - 459
Target Start/End: Complemental strand, 24666041 - 24665968
Alignment:
Q  386 attaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||||||||||||||||||||||| |||||||  ||||||||||| | |||||||| ||||||| ||||||    
T  24666041 attaagtcataatgttctatcataaaccatatttcgatccaactcattgacctctaaatatttcttaatagttt 24665968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 445
Target Start/End: Complemental strand, 30031535 - 30031427
Alignment:
Q  337 acaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaat 436  Q
    |||||||||| |  ||| |||| ||| |||||||||| ||||| || | |||| | |||| ||||||||||||||| |||||| | ||||||||||| |     
T  30031535 acaacaaccaagccttatcccactaagtgaggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttaaatccaactcattgac 30031436  T
Q  437 ctctaaatc 445  Q
    |||||||||    
T  30031435 ctctaaatc 30031427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 586129 - 586046
Alignment:
Q  337 acaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttc 420  Q
    ||||||| || | |||| |||||||| ||||||||||  ||||||| | || | ||||||||||||||||||| ||||||||||    
T  586129 acaacaatcaaggtttatcccattaagtgaggtcggctccatgaatcaaatgacgtcataatgttctatcatatacaatatttc 586046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 9593767 - 9593833
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||||| |||||    |||||||||||||||||||| |||||| || ||||||    
T  9593767 cataatgttctatcataaaccatattgggatccaactcattaatctctaagtctttcctaatagttt 9593833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 449
Target Start/End: Complemental strand, 5096057 - 5096001
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttc 449  Q
    |||||||||||||||||||| ||||||   ||||||||||||| | |||||||||||    
T  5096057 cataatgttctatcataaaccatattttgatccaactcattaaccactaaatctttc 5096001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 459
Target Start/End: Complemental strand, 31818780 - 31818688
Alignment:
Q  367 ggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||| ||||| || | |||| | |||||||||||||||||||| ||| ||   ||||||||||||||||| ||| ||||| || ||||||    
T  31818780 ggtcggctacatggatcaaattacgacataatgttctatcataaaccatactttgatccaactcattaatctccaaacctttcctaatagttt 31818688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 33529389 - 33529353
Alignment:
Q  164 acaatacgctatttagtacaaagtgttgttaaatagc 200  Q
    ||||||| |||||||||||||||||||||||||||||    
T  33529389 acaataccctatttagtacaaagtgttgttaaatagc 33529353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 449
Target Start/End: Complemental strand, 26292018 - 26291944
Alignment:
Q  375 acatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttc 449  Q
    |||||||| | |||| || |||||||| |||||||||| ||||||   | |||||||| ||||||||||||||||    
T  26292018 acatgaatcaaattatgttataatgttatatcataaaccatatttttattcaactcatgaatctctaaatctttc 26291944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 35199682 - 35199747
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||||||||||||| ||| ||||||  || |||||||||||||||| ||||||| || ||||||    
T  35199682 cataatgttctatcatataca-tatttctatctaactcattaatctctagatctttcctaatagttt 35199747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 487
Target Start/End: Original strand, 34637 - 34670
Alignment:
Q  454 tagtttttctaggttttcctctgcctctagtgat 487  Q
    |||||||||||||| |||||||||||||||||||    
T  34637 tagtttttctaggtcttcctctgcctctagtgat 34670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 203
Target Start/End: Complemental strand, 9990457 - 9990420
Alignment:
Q  166 aatacgctatttagtacaaagtgttgttaaatagcaac 203  Q
    |||||||||| || ||||||||||||||||||||||||    
T  9990457 aatacgctatctaatacaaagtgttgttaaatagcaac 9990420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 452
Target Start/End: Original strand, 14389222 - 14389279
Alignment:
Q  395 taatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttctta 452  Q
    ||||||| |||||||||| ||||||   || |||| ||||||||||||||||||||||    
T  14389222 taatgttatatcataaaccatatttggatctaacttattaatctctaaatctttctta 14389279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 409
Target Start/End: Original strand, 1615226 - 1615298
Alignment:
Q  337 acaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcata 409  Q
    |||||||||| || ||| |||| |||||||||||||| ||||| || | || | |||||| ||||||||||||    
T  1615226 acaacaaccaagtcttatcccactaaatgaggtcggctacatggatcaaatgacgtcatagtgttctatcata 1615298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 441
Target Start/End: Original strand, 3210567 - 3210615
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctcta 441  Q
    ||||||||||||||||||   |||||||  |||||||||||||||||||    
T  3210567 cataatgttctatcataactcatatttccatccaactcattaatctcta 3210615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 5565504 - 5565468
Alignment:
Q  164 acaatacgctatttagtacaaagtgttgttaaatagc 200  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  5565504 acaatacgctatttagtacgaagtgttgtcaaatagc 5565468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 9053953 - 9053921
Alignment:
Q  168 tacgctatttagtacaaagtgttgttaaatagc 200  Q
    ||||||||||||||||||||||||| |||||||    
T  9053953 tacgctatttagtacaaagtgttgtcaaatagc 9053921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 19390966 - 19391006
Alignment:
Q  161 tccacaatacgctatttagtacaaagtgttgttaaatagca 201  Q
    ||||||||| ||||||||||||||||| |||| ||||||||    
T  19390966 tccacaataagctatttagtacaaagtattgtcaaatagca 19391006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 26373111 - 26373143
Alignment:
Q  167 atacgctatttagtacaaagtgttgttaaatag 199  Q
    |||||||||||||||||||||||||| ||||||    
T  26373111 atacgctatttagtacaaagtgttgtcaaatag 26373143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 452
Target Start/End: Complemental strand, 32400353 - 32400297
Alignment:
Q  396 aatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttctta 452  Q
    ||||||||||||||||| |||||||| ||||| | ||||| ||||| | ||||||||    
T  32400353 aatgttctatcataaactatatttcaatccaaataattaaactctagaactttctta 32400297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 5e-17; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 406 - 487
Target Start/End: Original strand, 39322138 - 39322219
Alignment:
Q  406 cataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggttttcctctgcctctagtgat 487  Q
    ||||||| |||||||  |||||||||||||||| || |||||||||| |||||||||||||| ||||||| || ||||||||    
T  39322138 cataaactatatttctatccaactcattaatctttagatctttcttaatagtttttctaggtcttcctctaccactagtgat 39322219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 459
Target Start/End: Complemental strand, 6889250 - 6889150
Alignment:
Q  359 ttaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtt 458  Q
    ||||||||| || || ||||| |||| |||| | |||||||||||||||||||| ||||||  | |||||| ||||||||||||||||||| || |||||    
T  6889250 ttaaatgagttcagctacatggattaaattacgccataatgttctatcataaaccatattttggcccaactaattaatctctaaatctttcctaatagtt 6889151  T
Q  459 t 459  Q
    |    
T  6889150 t 6889150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 459
Target Start/End: Complemental strand, 9235296 - 9235204
Alignment:
Q  367 ggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||| ||||| || | |||| | |||||||||||||||||||| |||||||  |||| |||||||||||||| |||||||||| ||||||    
T  9235296 ggtcggctacatggatcaaattatgccataatgttctatcataaaccatatttcgatccagctcattaatctctatatctttcttaatagttt 9235204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 364 - 458
Target Start/End: Complemental strand, 6788319 - 6788225
Alignment:
Q  364 tgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtt 458  Q
    |||||||||| |||||||| | |||| |  ||||||||||||||||||  ||||||||||||||||||||||| || || |||||| || |||||    
T  6788319 tgaggtcggctacatgaatcaaattacgctataatgttctatcataaatcatatttcagtccaactcattaatttccaagtctttcctaatagtt 6788225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 43557886 - 43557947
Alignment:
Q  387 ttaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatcttt 448  Q
    |||||||||||||||||||||||||| |||||||  ||||||||| ||||||| ||||||||    
T  43557886 ttaagtcataatgttctatcataaaccatatttcgatccaactcaataatctccaaatcttt 43557947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 368 - 452
Target Start/End: Complemental strand, 30588695 - 30588611
Alignment:
Q  368 gtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttctta 452  Q
    |||||| ||||| || |||| | ||||||||||||||| |||||| |||||||  ||||||||||| ||||||| ||||||||||    
T  30588695 gtcggctacatggatcatatcacgtcataatgttctattataaaccatatttcgatccaactcattcatctctagatctttctta 30588611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 14667994 - 14667931
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtag 456  Q
    |||||||||||||||||||| ||| ||   ||||||||||||||||||| ||||||||||||||    
T  14667994 cataatgttctatcataaaccatacttggatccaactcattaatctctagatctttcttagtag 14667931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 459
Target Start/End: Complemental strand, 29922536 - 29922441
Alignment:
Q  364 tgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||| ||| ||||| || | |||| | |||||||||||||| ||||| |  |||||||||||||  ||||||||||||||||||||| ||||||    
T  29922536 tgaggttggctacatggatcaaattacgccataatgttctatcgtaaaccaggtttcagtccaacttgttaatctctaaatctttcttaatagttt 29922441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 367 - 449
Target Start/End: Original strand, 418067 - 418149
Alignment:
Q  367 ggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttc 449  Q
    ||||||| ||||| || | |||| | |||||||||||||||||||| | ||||   |||||||||||||||||||||||||||    
T  418067 ggtcggctacatggatcaaattacgccataatgttctatcataaaccacatttggatccaactcattaatctctaaatctttc 418149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 459
Target Start/End: Complemental strand, 11675779 - 11675686
Alignment:
Q  367 ggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcag-tccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||| ||||| |||| | || | |||||||||||||||||||| |||||| |  |||||||||||||||||||||||| || || ||||||    
T  11675779 ggtcggctacatggattaaactacgccataatgttctatcataaaccatatttaaaatccaactcattaatctctaaatctgtcctaatagttt 11675686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 444
Target Start/End: Complemental strand, 35615508 - 35615455
Alignment:
Q  391 gtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaat 444  Q
    |||||||||||||||||||||| ||||||   ||||||||||||||||||||||    
T  35615508 gtcataatgttctatcataaactatatttttatccaactcattaatctctaaat 35615455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 450
Target Start/End: Complemental strand, 37918253 - 37918198
Alignment:
Q  395 taatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttct 450  Q
    ||||||| ||||| | ||||||||||| ||||||||||||||||||| ||||||||    
T  37918253 taatgttttatcaaatacaatatttcaatccaactcattaatctctatatctttct 37918198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 459
Target Start/End: Complemental strand, 7678756 - 7678635
Alignment:
Q  337 acaacaaccatgttttaccccattaaatgaggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaat 436  Q
    |||||||||| |||||| |||| ||| || ||||||| ||||| || | | ||  |||||||||| ||| ||||||  ||||||  ||||||||||||||    
T  7678756 acaacaaccaagttttatcccactaagtggggtcggctacatggatcaaactacctcataatgtt-tattataaaccgtatttcgatccaactcattaat 7678658  T
Q  437 ctctaaatctttcttagtagttt 459  Q
    ||||| |||||||| | ||||||    
T  7678657 ctctagatctttctaaatagttt 7678635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 12576919 - 12576985
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||| ||||||||| || |||||||  | ||||||||||||||||| |||||||||| ||||||    
T  12576919 cataatggtctatcatataccatatttctattcaactcattaatctctagatctttcttaatagttt 12576985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 430 - 487
Target Start/End: Complemental strand, 27800017 - 27799960
Alignment:
Q  430 cattaatctctaaatctttcttagtagtttttctaggttttcctctgcctctagtgat 487  Q
    |||||||||| |  ||||||||| |||||||||||||| || ||||||||||||||||    
T  27800017 cattaatctcaagttctttcttaatagtttttctaggtcttactctgcctctagtgat 27799960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 426 - 467
Target Start/End: Complemental strand, 28005725 - 28005684
Alignment:
Q  426 aactcattaatctctaaatctttcttagtagtttttctaggt 467  Q
    |||||||||||||||| |||||||||| ||||||||||||||    
T  28005725 aactcattaatctctagatctttcttaatagtttttctaggt 28005684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 17340496 - 17340560
Alignment:
Q  394 ataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtt 458  Q
    |||||||| |||||||||| ||||||   || |||||||||| |||||||||||||||| |||||    
T  17340496 ataatgttatatcataaaccatatttggatcaaactcattaacctctaaatctttcttaatagtt 17340560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 459
Target Start/End: Complemental strand, 23980169 - 23980101
Alignment:
Q  391 gtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||| ||||||||||||||| ||||||   |||||||||||||||| |||||| |||| | ||||||    
T  23980169 gtcatattgttctatcataaaccatatttagatccaactcattaatctataaatcattctcaatagttt 23980101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 459
Target Start/End: Original strand, 28186864 - 28186900
Alignment:
Q  423 tccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||||||||||||||| ||||||    
T  28186864 tccaactcattaatctctaaatctttcttaatagttt 28186900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 446
Target Start/End: Complemental strand, 32516785 - 32516725
Alignment:
Q  386 attaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatct 446  Q
    |||| |||||||| ||||||||||||| |||||| | |||||||  |||||||||||||||    
T  32516785 attacgtcataatattctatcataaaccatatttgaatccaacttgttaatctctaaatct 32516725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 482
Target Start/End: Complemental strand, 40938105 - 40938045
Alignment:
Q  423 tccaactcattaatctctaaatctttct-tagtagtttttctaggttttcctctgcctcta 482  Q
    ||||||||||||||||||| |||||||| |  || ||||||||||| ||||||||||||||    
T  40938105 tccaactcattaatctctagatctttctcttatattttttctaggtcttcctctgcctcta 40938045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 438
Target Start/End: Original strand, 15252777 - 15252848
Alignment:
Q  367 ggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatct 438  Q
    ||||||| |||||||||| | ||  |||||||||||||||||||||  ||||||  |||||||| |||||||    
T  15252777 ggtcggctacatgaattaaactacatcataatgttctatcataaaccctatttcgatccaactcgttaatct 15252848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 438
Target Start/End: Original strand, 21193693 - 21193756
Alignment:
Q  375 acatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatct 438  Q
    |||||||| | |||| ||||||||| |||||||||||| |||||||  |||||||| |||||||    
T  21193693 acatgaatcaaattatgtcataatgatctatcataaaccatatttctatccaactctttaatct 21193756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 2066220 - 2066154
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||| ||||||| ||||| ||| ||   ||||||||||||||||||| |||||| ||||||||||    
T  2066220 cataattttctatcgtaaactataattttatccaactcattaatctctagatcttttttagtagttt 2066154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 432
Target Start/End: Complemental strand, 7593771 - 7593725
Alignment:
Q  386 attaagtcataatgttctatcataaacaatatttcagtccaactcat 432  Q
    |||| ||||| ||||||||||||||||  ||||||||||||||||||    
T  7593771 attacgtcattatgttctatcataaactttatttcagtccaactcat 7593725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 453 - 487
Target Start/End: Original strand, 12576991 - 12577025
Alignment:
Q  453 gtagtttttctaggttttcctctgcctctagtgat 487  Q
    ||||||||||||||| |||||||||||||||||||    
T  12576991 gtagtttttctaggtcttcctctgcctctagtgat 12577025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 452
Target Start/End: Original strand, 33636627 - 33636681
Alignment:
Q  398 tgttctatcataaacaatatttcagtccaactcattaatctctaaatctttctta 452  Q
    |||||||||| |||| ||||||| ||| || |||||||||| |||||||||||||    
T  33636627 tgttctatcacaaaccatatttcggtctaaatcattaatctttaaatctttctta 33636681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 38150049 - 38150099
Alignment:
Q  176 ttagtacaaagtgttgttaaatagcaacgatagtactgtagcatagcagaa 226  Q
    |||||||||||||||||| ||||||| | |||||||||| ||||| |||||    
T  38150049 ttagtacaaagtgttgtttaatagcagccatagtactgtggcataacagaa 38150099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 43035204 - 43035138
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||||||||||||| || ||||||| ||||||||||| ||| || |||| |||| || ||||||    
T  43035204 cataatgttctatcatacaccatatttcggtccaactcataaatttccaaatttttcctaatagttt 43035138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 43475462 - 43475396
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||| |||||| ||||||  |||||||  ||||||||||||||||||  |||||||||| ||||||    
T  43475462 cataacgttctaccataaatcatatttcgatccaactcattaatctctggatctttcttaatagttt 43475396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 487
Target Start/End: Complemental strand, 5305789 - 5305756
Alignment:
Q  454 tagtttttctaggttttcctctgcctctagtgat 487  Q
    |||||||||||||| |||||||||||||||||||    
T  5305789 tagtttttctaggtcttcctctgcctctagtgat 5305756  T

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Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 199
Target Start/End: Complemental strand, 17755267 - 17755234
Alignment:
Q  166 aatacgctatttagtacaaagtgttgttaaatag 199  Q
    ||||||||||||||||||||||||||| ||||||    
T  17755267 aatacgctatttagtacaaagtgttgtcaaatag 17755234  T

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Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 487
Target Start/End: Complemental strand, 18698944 - 18698911
Alignment:
Q  454 tagtttttctaggttttcctctgcctctagtgat 487  Q
    |||||||||||||| |||||||||||||||||||    
T  18698944 tagtttttctaggtattcctctgcctctagtgat 18698911  T

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Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 459
Target Start/End: Complemental strand, 20367123 - 20367050
Alignment:
Q  386 attaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||| ||||||||||| | |||||||| ||||||   ||||||||||||||||||| ||| ||| || ||||||    
T  20367123 attacgtcataatgttatgtcataaaccatatttggatccaactcattaatctctagatccttcctactagttt 20367050  T

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Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 475
Target Start/End: Complemental strand, 36200959 - 36200870
Alignment:
Q  386 attaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggttttcctct 475  Q
    |||| ||||||| |||  ||||| ||| ||||||   ||||||||||||| ||||| ||||||  || |||||||||||||| |||||||    
T  36200959 attacgtcataaagtttgatcatgaaccatatttggatccaactcattaacctctatatcttttataatagtttttctaggtcttcctct 36200870  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 367 - 459
Target Start/End: Complemental strand, 6859630 - 6859538
Alignment:
Q  367 ggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||| |||||||| || | |||| | |||||||||||||||||||| ||||||  | |||| | | |||||| |||||||||| || ||||||    
T  6859630 ggtcagcaacatggataaaattatgccataatgttctatcataaaccatattttggcccaagtaactaatctgtaaatctttcctaatagttt 6859538  T

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Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 34156684 - 34156720
Alignment:
Q  167 atacgctatttagtacaaagtgttgttaaatagcaac 203  Q
    |||||||||||||| |||| |||||||||||||||||    
T  34156684 atacgctatttagtgcaaaatgttgttaaatagcaac 34156720  T

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Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 449
Target Start/End: Complemental strand, 41894277 - 41894233
Alignment:
Q  405 tcataaacaatatttcagtccaactcattaatctctaaatctttc 449  Q
    |||||||| ||||||   |||||||||||||||||||||||||||    
T  41894277 tcataaaccatatttggatccaactcattaatctctaaatctttc 41894233  T

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Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 201
Target Start/End: Original strand, 41894443 - 41894479
Alignment:
Q  165 caatacgctatttagtacaaagtgttgttaaatagca 201  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  41894443 caatacgctatttactacaaagtgttgtcaaatagca 41894479  T

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Target: scaffold0010 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 160383 - 160449
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||| ||| |||||||| || ||||||    
T  160383 cataatgttctatcataaaccatatttcggtcgaactcattaatttcttaatctttcctaatagttt 160449  T

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Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 459
Target Start/End: Original strand, 43528 - 43587
Alignment:
Q  400 ttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 459  Q
    ||||||||||||| |||||||||| |||| ||||||| |||||||||||| || ||||||    
T  43528 ttctatcataaaccatatttcagttcaacacattaatttctaaatctttcctaatagttt 43587  T

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Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 178508 - 178545
Alignment:
Q  422 gtccaactcattaatctctaaatctttcttagtagttt 459  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  178508 gtccaactcattaatctctatatctttcttaatagttt 178545  T

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Target: scaffold0180 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 467
Target Start/End: Original strand, 25502 - 25577
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatc-tttcttagtagtttttctaggt 467  Q
    ||||||||| ||||||| |   ||||||  ||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  25502 cataatgttttatcatataacttatttctatccaactcattaatctctaaatcattttttaatagtttttctaggt 25577  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 461
Target Start/End: Complemental strand, 66761 - 66692
Alignment:
Q  393 cataatgttctatcataaacaatatttcag-tccaactcattaatctctaaatctttcttagtagttttt 461  Q
    |||||||||||||||||| | |||||||   || |||||||||||||||| |||||||||| || |||||    
T  66761 cataatgttctatcataagccatatttcctatctaactcattaatctctagatctttcttaataattttt 66692  T

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Target: scaffold0491 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 3880 - 3932
Alignment:
Q  386 attaagtcataatgttctatcataaacaatatttcagtccaactcattaatct 438  Q
    |||||| | |||||||| ||||||||| |||||| | ||||||||||||||||    
T  3880 attaagccttaatgttcaatcataaaccatattttaatccaactcattaatct 3932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 457
Target Start/End: Original strand, 2360 - 2424
Alignment:
Q  393 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagt 457  Q
    ||||||||||||| ||| |  |||||||  || |||||||||||||||| |||||||||| ||||    
T  2360 cataatgttctattatataacatatttctatcaaactcattaatctctagatctttcttaatagt 2424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 367 - 439
Target Start/End: Original strand, 58259 - 58331
Alignment:
Q  367 ggtcggcaacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctc 439  Q
    ||||||| ||||| || | |||| | |||||||||||||||||||| |||| |  |||||||||||| |||||    
T  58259 ggtcggctacatggatcaaattacgacataatgttctatcataaaccatatcttggtccaactcattgatctc 58331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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